LOCUS       DAQUWA010000001        57027 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.001, whole genome shotgun sequence.
ACCESSION   DAQUWA010000001 DAQUWA010000000
VERSION     DAQUWA010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 57027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 57027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..57027
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.001"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            80..862
                     /gene="fdhD"
                     /locus_tag="R8X70_000001"
     CDS             80..862
                     /gene="fdhD"
                     /locus_tag="R8X70_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEF2927824.1"
                     /translation="MEPLFTTQILKYKGKDLFTCDDTLVREIKLEIFINDEKVGALMA
                     TPVDEQALAVGYLMSENIIAKVSDIESIETKDDGMSVHIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDPQSIEASKITSEAKFNKDEILKQMSEFYTQCDLYEKTGCVHTAKLF
                     VDKDTFFIGEDIAQHNTIDKALGKARLAGVELSKCFLMVSGRLSSEMVAKAVMHKIPV
                     LVSRTAPTCLGVMIARKFDLTLCGFARGENINIYSGENRING"
     gene            855..1586
                     /locus_tag="R8X70_000002"
     CDS             855..1586
                     /locus_tag="R8X70_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEF2927825.1"
                     /translation="MDKNKEILAYMKELLNSNEKLDCGTAFKIAKKFDVAIEEIGKIA
                     DINGIRIDNCELGQFGHLDFEKAKIEVLRKVEPSLDEKRKIFCKDARNIAKEGCGLKS
                     MRSALKAYKIDVKYCQLGCFKEKKGKQFVVRTKTWIENADGDLLFGKGKTELLELIGQ
                     TGSLLHASKLMGINYKKAWMHLQVLQKNSQEILVSSRQGRSKESGTKLTPRAMELMEN
                     YATLQKDIEEYANKRFKELFFKHKK"
     gene            1711..2283
                     /gene="yedF"
                     /locus_tag="R8X70_000003"
     CDS             1711..2283
                     /gene="yedF"
                     /locus_tag="R8X70_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HEF2927826.1"
                     /translation="MRIDCRNLECPKPIVETKKALQNLQNNEILEIVLNSVISKNNVL
                     KFLTSLNLHADIEENNNEFYIRVKKQELDFSKASTDEYNVLFLKTDKVGDGKLGENLL
                     VGFLSTLKNVENIPSKILCVNESVFINVDENHRAHLAMKELEKLGVEIISCGACLEFF
                     GKSKELKIGSIGNAYEILNELCGKAKIITL"
     gene            2291..3313
                     /gene="selD"
                     /locus_tag="R8X70_000004"
     CDS             2291..3313
                     /gene="selD"
                     /locus_tag="R8X70_000004"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:2339..2341,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEF2927827.1"
                     /translation="MEYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQTSPALLSDIG
                     NNEDASVFQISPELALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDTCHHELNVLQELLQGANDKVQECGGIIVGGHTIESGELFFGLSVTGKVHPKKFI
                     ANNTAKEGDLILLTKPLGTGILSTALKAQMLEEKHLDRMLESMMDLNYKSSQIALRFG
                     VNAMSDVTGFGFLGHLREMLNDSISFTVFKNELPYLEGVKEYFDMGLIPGGAYKNLDF
                     IQEFYPGLNEEDLLLCDPQTSGGLLIAIEEKKALECLKALEDENIKAKIVAKAVAKQD
                     DRFIFS"
     gene            3451..6954
                     /locus_tag="R8X70_000005"
     CDS             3451..6954
                     /locus_tag="R8X70_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEF2927828.1"
                     /translation="MIQKSLALAEELQGKIEANISNSEKEFHAKMQKLLNNPENKVML
                     IELLDRSFRCKDKRASFELIEHTLNKYGIADFFSAFEKFLLFSFLNFGKFAPNLSVPF
                     FVKHLREDTKAMVLDANPSVLEPHMRKRKDQDNITLNVNLIGEEVLGEAESKYRIQKY
                     EEALKSSYITYISIKITTIFSQINIIDFEYSKDEVVKRLDHLYALALEEEKKQGVSKF
                     INLDMEEFRDLELTVAAFMESVSKFDIKAGIVLQAYIPDSYEYLKKLFAFSKERVLKG
                     MKPIKIRFVKGANMESEETIASQRGWELPTFYKKIDTDSNYNKMLDFVLEGDNYKYIN
                     VGIASHNIFEIAYAYTRISEAGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     AHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDNNWNVQKELFLKSLEGIKTLDNST
                     HRTQDRNKAPNIVSAYESGMFNNESDTDFILPQNRAWAKVIRAKYENLENYDVMPVIG
                     DLEFDKNTLNILEVKDKIKDRMIGKAYLAGENEIKKALKVAKNSNFKNTSFDEIHAIL
                     AKAANLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFTEFYPHSLKVLREQNKNTQ
                     FSPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDAGI
                     SKDALIFLPSKGSDISKYLLVDEAVKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEVYEDEEFKKTLVDAAASMA
                     VGNPFEFKNKLGTLADKPSAKVEKALNELAPYEEWALKPQFLENNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKDLKEAIEIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGVKKSAIGFGRKVGIYNYITQFLDISTSEADENLLNNE
                     LVKTLEKIDLGTNEENKKALNNAILMAKSYAYHYRNEFSVSKDYVNIRGEDNLFSYTK
                     IKNLAFRVCENDNLQDILGVIIAANILNIPLSVSYEENDKISLVKELCKAINLNLEIT
                     NESKAQFVSRLKNFERIRYHGKVSVEDEIYQEAAKEAKIIIREKPLLNGRFELLFYHN
                     EKALSVSFHRYGNLGIRALNH"
     gene            6969..8450
                     /gene="putP"
                     /locus_tag="R8X70_000006"
     CDS             6969..8450
                     /gene="putP"
                     /locus_tag="R8X70_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEF2927829.1"
                     /translation="METVQINTPIAIMFVAYAALMLYIGFYFYRQNKNTEDYFLGGRS
                     LGPVVSALSAGASDMSGWLLMGLPGALYASGLIESYIAIGLSIGALLNWSFVAKRLRI
                     YTSVIANSITIPDYFETRFDDDKHILRIVCAIVILIFFTFYVSSGLVGGAKLFEATFG
                     IRYEYALTTGTLIIVAYTFLGGYKAVCWTDLLQGLLMMGALIVVPAVMLYHLGGFGEA
                     MAVIEEIKPNALSMGEGIGALSIVSALAWGLGYFGQPHILVRFMSIRSTKDIPAATFV
                     GISWMVISLIGACFIGLLGIAYVHKFELTLQDPEKIFIVMSQLLFNPWIAGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYKRIFNKEASNKTVMNLGRIGVLLVALVAFVISTDK
                     ESSVLSIVAYAWAGFGASFGSVMLFSLFWSRMTRIGAILGMITGAVMVVLWKNYLAEL
                     FNFPIYEIVPGFVAASAVIIIASLLTQVRPGTKAAYERMLKEL"
     gene            complement(8592..8819)
                     /gene="yedF"
                     /locus_tag="R8X70_000007"
     CDS             complement(8592..8819)
                     /gene="yedF"
                     /locus_tag="R8X70_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HEF2927830.1"
                     /translation="MKITYTLNLEGEACPYPAIATLDALPQLKSGEILEVLCDCPQSI
                     NSIPQDAKNRGFKILEIDQNGPTLRFLIQKP"
     gene            complement(8823..10034)
                     /gene="yedE"
                     /locus_tag="R8X70_000008"
     CDS             complement(8823..10034)
                     /gene="yedE"
                     /locus_tag="R8X70_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004295570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HEF2927831.1"
                     /translation="MNSFKQKYLINFWDNSRAMITLGILSAVYFGIFGGVWAVTGEMT
                     RWGGEFLELLGMDLNGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWFFGVFMVLGIYLG
                     VKLCNTSFFKPKAKLQCANKENIPLLKQNSRAKFHFVLGSILFVAFLIWVFYLVLVNG
                     NISTQSKQSLLALALIFGFAFGFIISRGQICFTACFRDLFLFGRENAIKGALIGMIIA
                     SLIAFAFILHGHNSKLIELSPAVAIGAFLFGFGIVFAGGCECGWTYRACEGQSHFMIV
                     GIANIIGTMILALTYDFLPSAFKEGVKINLLNEFGNLGGFFINLALFILMFACVLFYK
                     KHFFQKLNQKG"
     gene            10191..10285
                     /locus_tag="R8X70_000009"
     tRNA            10191..10285
                     /locus_tag="R8X70_000009"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10225..10227,aa:Sec,seq:tca)
     gene            10307..11557
                     /locus_tag="R8X70_000010"
     CDS             10307..11557
                     /locus_tag="R8X70_000010"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEF2927832.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDYVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHSRCINVIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKDAIGTTGKGIGPSYADKINRTGHRVGELLDPQRLHNALMK
                     DFEANKNYLEFLGIEIPDSDELLSDLKRFNEILTPFITDTTRMLWKALDEDKKVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGALTGLGLNPKEAGNIIGIVKAYTTRVGNGAFPT
                     EDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYIPSDLENVQPIYEEMDGWDKVFGIKDYDLLPENAKKYIAR
                     LEELAGVKVKYISTSPERDDTIIL"
     gene            11554..11982
                     /locus_tag="R8X70_000011"
     CDS             11554..11982
                     /locus_tag="R8X70_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HEF2927833.1"
                     /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEHEKAYELSRQEC
                     ESLGVLPKSGSIAELRSNLSMAQVGREALARAKEKVELSKKEMNHYQFLYQKAHLDYE
                     KMKALETEEIKQKQKELAKAEEKFLDEIAISRFFKREKDD"
     gene            11975..12493
                     /locus_tag="R8X70_000012"
     CDS             11975..12493
                     /locus_tag="R8X70_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HEF2927834.1"
                     /translation="MIKKFILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QALEAYKASFEALQKERLEVLNQREAEVNATLAQIESLKEQNTKLLEEQQKILNSINE
                     KTEGRIKEIYSQMKDTAIADVLTQMDAEDASKIMLSLESRKISGVLSKMDPAKASELT
                     LLLKNMDNNKSN"
     gene            12567..13118
                     /locus_tag="R8X70_000013"
     CDS             12567..13118
                     /locus_tag="R8X70_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HEF2927835.1"
                     /translation="MRIKLPHIPYITNKIMLDIAHSSFVEIKDNIEKLNPCIKQILED
                     DLMNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFGVILNSEDRHNHL
                     AHRILEELIENDYINFVVSENRVKNLIFSSIDDYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYELIFEKLYQEELRKKGMF"
     gene            13122..14240
                     /gene="carA"
                     /locus_tag="R8X70_000014"
     CDS             13122..14240
                     /gene="carA"
                     /locus_tag="R8X70_000014"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEF2927836.1"
                     /translation="MKAYIYIENDIFLTAKAFGKGGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSPTFSNFRAQKSLQEYLEE
                     HGKIGVYGLDTRYLVKMLRDSGNLRAVISTEISSKEELKAALEKSAKIDEINFVKEVS
                     TKKSYAHKHGVWNNATQSYNKAKKNTKKVAVIDYGVKANILNELVEVGLEVEVFPYNT
                     KAEELIKLYQKGQIQGVFLSNGPGEPKILKQEIAEIKKLAEAKIPMLGICLGHQLLSN
                     AFGYETYKMKFGQHGANHPVINLENKSVEITAQNHNYNVPEELCEVAIITHRNLFGDN
                     VEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
     gene            14237..14908
                     /locus_tag="R8X70_000015"
     CDS             14237..14908
                     /locus_tag="R8X70_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEF2927837.1"
                     /translation="MNFLPLNFDFLAIFSVAFLSSFGHCYSMCGGFILAFMNLNSTHK
                     NLFLLTFIYQLFRIFSYILLGIIFGIFGNLLAINAKIQSLSFFILGVFMVILGFSLIF
                     RGKILAFIENRAFFEYFIKKIIKKSMGFKGVKSAMILGFANGFVPCGLVYFFLANAMS
                     RQNVTESILVMLVFGLSTLPAMLFFVKISQYLGVFLKKVFNYLSYFIIVAYGIGLAYM
                     GFKAF"
     gene            14909..16123
                     /locus_tag="R8X70_000016"
     CDS             14909..16123
                     /locus_tag="R8X70_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEF2927838.1"
                     /translation="MANSVAEQVLKVIEKKTIFFKINLQGIIIDASEKFCKISGYSKK
                     ELIGKHHFILKHPDVKESYINQLLGKLWQKEAYSVVFKNVDKLGKTFYLDAFLIPIVD
                     NKGDLNEIIALSYDISNSFKLNEELVLNHAKLREISVNLEKTAKERKEEFAKLSKDFE
                     YKLKVALEKNEKDTKKIYKEILNSSIEQMISDIAHQWRQPLNELGIAMFQMKQNVQDE
                     KGFTEIYLQSKSTIKNMSETIDIFRTLFKNNENEKNHVSLREILNKVIGIAFETIEKH
                     QVNTRIISKTDYRVIAHENGLMRVFLNLIINSIEAFKTQKVKNIIFSFSKFGKNYIKV
                     KVKDNAGGVDEDILDKIFQPYITTKHPSQGIGAGLYISKQIVESFGGKIQVKNIKDGA
                     CFEIYLKLQEGN"
     gene            16127..16795
                     /locus_tag="R8X70_000017"
     CDS             16127..16795
                     /locus_tag="R8X70_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEF2927839.1"
                     /translation="MKELVILVVEDEVKIRESLVNVLSSRYSKVIGAQNGDEGLKKFK
                     KFKPDLIITDIAMPIMDGLDMAKEIKEIANDVPIVVLSAYSEKERLLRSIDIGIDKYL
                     IKPVDVDELFKVLDYLVGEKIETNALVDISKEYQFNKTKRILIHKGQEIVLTKKELAF
                     ISLLLKQPGVLVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSLGYKI
                     NINK"
     gene            16921..18387
                     /gene="ccoN"
                     /locus_tag="R8X70_000018"
     CDS             16921..18387
                     /gene="ccoN"
                     /locus_tag="R8X70_000018"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEF2927840.1"
                     /translation="MHPGNVLNYDYTVARYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESKFLMAIGKL
                     HFWLYMITMIVAVISLFAGVSTSKEYAELEWPLDILVVLIWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGIAMLYLFNNMAVPTYFVAEMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRIFRRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIIPYYWIRAI
                     GGLLYLIGFFMFTYNIYKSIACGKVLDKEPKSASPMAA"
     gene            18400..19065
                     /gene="ccoO"
                     /locus_tag="R8X70_000019"
     CDS             18400..19065
                     /gene="ccoO"
                     /locus_tag="R8X70_000019"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEF2927841.1"
                     /translation="MFSWLEKNPFFFAVAVFIVIAYAGIIEVLPNFAENARPIEGKKP
                     YTVLQLAGRQIYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTG
                     PDLMRVGNYRTTDWHENHMWDPVSVVPNSIMPAYKHMFKNNADMETAYAEALTVKKVF
                     NVPYDTENGTKLGTWEEAQAEIKAEAQAIVDQMKNQEVKDAFARGEIKEIVALIAYLN
                     SLK"
     gene            19070..19333
                     /locus_tag="R8X70_000020"
     CDS             19070..19333
                     /locus_tag="R8X70_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HEF2927842.1"
                     /translation="MEHLVIIWNVIKNLVTLNLSAVQKHEWEIFQGYGFFLFVMFLSI
                     VLYSYWYHLYRAEKKGERNYEKYANLALSDDIDDSVLESKRSA"
     gene            19333..20196
                     /locus_tag="R8X70_000021"
     CDS             19333..20196
                     /locus_tag="R8X70_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEF2927843.1"
                     /translation="MQWLNLQDNVNLLSFIGAILIILITLVVVGRMFKYMKEKKGEAE
                     LSEHSWDGIGEYKNAIPIGWAVIFFLTIVWAVWYFLWGYPLNSYSSIGEYNEEVKAYN
                     TKFEEKFQNLSTEDKVAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGLIDAI
                     KHGAKGMNFPGGEMPAAADLGIAEEDIPAIAAYVAKELSAIKKTSNENLVAKGKEAYA
                     TCAACHGEDGKGQDGIFPDLTKYGSAAFVVDVLHSGKTGFIGAMPAFSILNDTQKEAV
                     GEYVISLSRGE"
     gene            20193..20417
                     /locus_tag="R8X70_000022"
     CDS             20193..20417
                     /locus_tag="R8X70_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HEF2927844.1"
                     /translation="MMENTNRCVFSLSGVTGMLIATVLLLAILVGLTIWGLKAQQEVM
                     QQPYSLKDIQNVKMLGSKEQDHKSIGGTAQ"
     gene            20414..20515
                     /locus_tag="R8X70_000023"
     CDS             20414..20515
                     /locus_tag="R8X70_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927845.1"
                     /translation="MSKVLEYLIVIGLVVTAAITAWSVLTANHLHIG"
     gene            20512..21102
                     /locus_tag="R8X70_000024"
     CDS             20512..21102
                     /locus_tag="R8X70_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927846.1"
                     /translation="MRKILQDGLLAIFLFFIPVQILALEPVVFNENILNQKVVDEINL
                     IGKELQEKSGIFAGVAIGDKSDFQTLLDLHKQLPQSYVLLVLSKNSHKVDIIGSKGAL
                     TLIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYGDMVDRLAQARGIELQHSIG
                     NANRDTINILRILIYGFICFALLYYAQRRMKRKKNA"
     gene            21095..21619
                     /locus_tag="R8X70_000025"
     CDS             21095..21619
                     /locus_tag="R8X70_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEF2927847.1"
                     /translation="MLESKKTFWPYGILISIFAIVVACVATIIVASNYPVYEDDFYFD
                     SYQNVENNYNIIQKQQEQFDTLFKVEFQNDKIDLIGKRKIASYTISADSYLAQFKITA
                     LNDQANIQNLKSEILLTRPHTREFDQKLLGQIQDGVLSVSLPQLEKGRWQLKIKLSTD
                     DEITGFFSYELNAQ"
     gene            21616..23982
                     /locus_tag="R8X70_000026"
     CDS             21616..23982
                     /locus_tag="R8X70_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEF2927848.1"
                     /translation="MILRIFSSSRKIKEYQEKAKAKNALLDSAFLVSDFLDRVCVVNS
                     FKASSYESLLLMQEACLKSKDLEKKLGISAEFFAFLKNNEYLFSFFKELSLEKKSIQD
                     LKNNDYYATYNEHLEILDEVYANYLLLLKQHNLYDDLSLAQEYKLNLDFLNEYEGIYY
                     DLQGFLSKFEEDLLCEISKIKSTIISFKTSKFNLEYLLELDFLKDIHLELDMFYEVNL
                     SQKKILKQEKLSNPNTLVKLKAFELRSLQCAFVMDEISNFVRAGIDPEKIAVITPDES
                     FCELLKLFDKNNMLNFASGVSIKESLFYQKIKALYNGANSDAFIYKIDENYFEQEKMI
                     FDYHNTLLHYLELQFEDFRTRFDQICDLQYFENLIHSFLKDESQELMNLVQKELCFIK
                     DLLKNKSLKLKELMQLFFMQLDQIKLSYVGGGKVTVMGLLESRGLSFDGVVILDFNED
                     FVPKRSINELFLNNEVRKKAGLISYERRENLQRLYYENLMKNAKKLSISFVENEEQTR
                     SRFLDELDFNFFEEKTTPSKAYLNALKLDYQGVELNLNPIKVPVLKHDIFEKELSFSR
                     LNLFLYQKRTYFYRYILELPEARALSDESKAKNQGNFIHKMLELYYKNYSKNNFNLKI
                     FNDLLEQEYPKYSISELELEIFKLKFIQFAENEKEHFKLGYKVIEQEEEHHKALNIQN
                     HTIRLKGIVDRIDKLEDKHFIIDYKSGKVPEKSFQLAFYKALCDENAEAKFYDLNQMQ
                     FVEEKAKSLDELKECLKDLLEQREEEIEFENDKDEYCPYKIIYKKDFR"
     gene            23979..26741
                     /locus_tag="R8X70_000027"
     CDS             23979..26741
                     /locus_tag="R8X70_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HEF2927849.1"
                     /translation="MKFKPFLALEASAGSGKTFALSVRFVALILQGAKINEILALTFT
                     KKASNEMKKRIIETFLNLEKESKKSECKELCELLGCEEDELIFLRDKKKQEFLRQELK
                     ISTFDSFFSRILRAFALNLGLSSDFDTSEEKLDVRAVFLKLLNRQELKDLAYYKVSLE
                     DNHDFFEELENFYENAYFKECVRIPNPSKASINQAYDDLRVYCLSLDHVKGYKYLCTH
                     FKDEVLQLSQFAKSDLLNLTGAPKYLQELEDSDAKFSQKRKAFIKALDAYAKELEEYK
                     IANLMNLLSHFSKAKDIIQKDKNTLSFSDISRRVLDLIRSDFKDMIYFRLDGYISHLL
                     IDEFQDTSVVQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDLL
                     QTEFKQIQKDQLTINYRSKQILVDFVNKTFQSKIKDYTPQLSLESKKGGFVRVIESQE
                     TKVDKDQAKEIQDKTLEALLEQLKFLKSKNIIYDDICILCWKNNDADMILDFLHEQDI
                     PAFTQSNILLENKACIRVLLEYAKYCIFGDKFYLHFLKEMLGFEPLKLKLDLAKSAVQ
                     NVLYLIKELKLDLNDMALIQFIEYAKSKDDFLKLLFEPCTLKIMSEQNRGINIMTVHK
                     SKGLEFDHVILLDSLSKNNPNNKTIMLEYDIDQGWELHIKDSYRKATQESEYKAFIDK
                     ITKADYEDDINKLYVAFTRAKGNLIIIKRNASFQSGNYPSYLNTMLDIEIQELGEIEI
                     QTNDTHLPQKESFQALMEFEKIPLQDIERKENTSSDEIYFGNAFHFFMQNLKLPQGEN
                     FDILCQKVSGKFRHFLNHDDFERLFKRIKNLLANAQFQKLIENKKLLKEQALSFQGEI
                     KQLDLLALGEDEAIIIDYKTGLNFNKHKEQVLLYKEAIEKILAKKSTQAFLVYVLEDK
                     VEIIEV"
     gene            complement(26738..27994)
                     /locus_tag="R8X70_000028"
     CDS             complement(26738..27994)
                     /locus_tag="R8X70_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WG repeat-containing protein"
                     /protein_id="HEF2927850.1"
                     /translation="MLICNHCNTKNLDIAKFCKECGNSDLYDPQAEEKLEQERRKQEE
                     LRRLEEEKRKIAQEEREKSLKQRKEFISKHKSKIIISMVSFFLIASLSIYQYFYGGKY
                     SRVYINKLEGKCHYDDASSCKMLQTIYKEKCDDGDGKACFAGIFVSGDLIRVKIDGQW
                     SFLDKNGEFAIEPKFDYVWSFGEGLAAVKLNGKWGFIDKNGEFVIKPKFDDAWSFWEG
                     LAGVKLNGKWGFIDKNGEFAIKPKFNAVWGFSEGLEAVELNGKWGFIDKNGEFVIEPK
                     FDEAWSFWEGLAGVKLNGKWGFIDKSGKIIAKPKFDGVGYFSEGLARVELNGKYGFMD
                     KNGKIVIESKFDDAWSFREGLAGVKLNGKYGFIDKNGEFVIKPNFDDAWYFREGLAKV
                     GLNGKYGLIDKSGKIVIEPIFDDIDY"
     gene            complement(27994..28794)
                     /locus_tag="R8X70_000029"
     CDS             complement(27994..28794)
                     /locus_tag="R8X70_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEF2927851.1"
                     /translation="MLSLKFKIQEYLQCKNCLKINPEEDAKFCIFCGKGLNHPARQRL
                     DYIYSKNPAIIVALLAKVAKADDKIITKDLSKFISSLLDKIEMFYSKEYSGFRNTYAS
                     IFEYEKNQGRSIHELCTSARFYEKEIDFLICLLLDLIYYDAKISANENALMENIIVGL
                     GLNLIKFREVKLKYEQIYNFTHEKAQQEQPKEDKFTITLEQAYEILNSHPKDDFETIK
                     KNYRKLAKEYHYDNLHSKELPPELLKIAQEMMKKINLAYEIIKETRGA"
     gene            28986..29411
                     /gene="rplM"
                     /locus_tag="R8X70_000030"
     CDS             28986..29411
                     /gene="rplM"
                     /locus_tag="R8X70_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEF2927852.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
     gene            29414..29803
                     /gene="rpsI"
                     /locus_tag="R8X70_000031"
     CDS             29414..29803
                     /gene="rpsI"
                     /locus_tag="R8X70_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEF2927853.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGIDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            29925..30884
                     /gene="cadF"
                     /locus_tag="R8X70_000032"
     CDS             29925..30884
                     /gene="cadF"
                     /locus_tag="R8X70_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HEF2927854.1"
                     /translation="MRKLLLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMDNRY
                     APGIRLGYHFDDFWLDQLELGLEHYSDVKYTNSTLTTDITRTYLSAIKGIDLGEKFYF
                     YGLAGVGYEDFSKGAFDNKSGGFGHYGAGLKFRLSDSLALRLETRDQISFHDADHSWV
                     STLGISFGFGSKKEKAVEEVADTRPAPQAKCPVEPREGALLDENGCEKTIYLEGHFDF
                     DKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKEL
                     EKFGVDKSRIQTVGYGQDKPRSSNDTKEGRADNRRVEAKFILN"
     gene            30884..31522
                     /locus_tag="R8X70_000033"
     CDS             30884..31522
                     /locus_tag="R8X70_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEF2927855.1"
                     /translation="MKKTILFDLDGTLIDSTDAILNSFQGAFKILGLTPKNNEELKNL
                     IGHPLEHMFKILYHEKAHLSQEFVLAYREIYSQIYLEQTTLLPKAKEALELAFEIADL
                     GIATTKGGKFTPLLLEHLGVKKFFKTLITLEDVTNPKPHAEPILLALEKMQKTKENAY
                     MIGDTILDIQAAMAANITPLALSCGYGDEDELKRYSMVFPSAYKSVLYIKND"
     gene            31626..35186
                     /gene="nifJ"
                     /locus_tag="R8X70_000034"
     CDS             31626..35186
                     /gene="nifJ"
                     /locus_tag="R8X70_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEF2927856.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGTVHGSLQTGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLCA
                     IKGRVPFLHFFDGFRTSHEIQKVEVMDYEHFDRLLDRKALLEFRNSALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMREISKITGREYKPFTYYGHKEPERIVIAM
                     GSVTQTLEEVVDHLNSKGEKVGIVKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYLDIKSAFYGKENAPIIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GIIDDVTHTSLQTGEKISLGDESAIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLAKIIPYEDAQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPSWKNLE
                     IKEKEQINAYKGTEFVEKIVKPMNAAKGDELPVSTFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMAKAPRGVKDHALEAKGTKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDIL
                     NKESTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIIANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRYRIENIMNENMQKVPNALA
                     ALFKEWIANKDKGAESVEIKDKMIPILEQNTDIKAVQDILNLKHFLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYSHLIKAIMAAEAYDGPSLIICYSPCIAHGIKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTMVGKEPDWDLYESFLMNEVRYNSL
                     KKSNPEHAKELFERNKKDAQRRYRQLKRIAMADFSDEVES"
     gene            35210..35521
                     /locus_tag="R8X70_000035"
     CDS             35210..35521
                     /locus_tag="R8X70_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HEF2927857.1"
                     /translation="MCFCTLLSYEDFEEYFKILNTKQNVELGNLQNPFFNPTFEKIKD
                     IKIIAIMLDRVKIDNKWYKKGDKIGEAVITDITTKEIILRYDTLDFKIAFKNNDKINI
                     Y"
     gene            35499..36917
                     /gene="mshL"
                     /locus_tag="R8X70_000036"
     CDS             35499..36917
                     /gene="mshL"
                     /locus_tag="R8X70_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HEF2927858.1"
                     /translation="MIRLIFIKILFFTNLIYAMECQKRLFDININEDLSIEESLKELA
                     SYCSFSVVIKDTIAKEKLKAIQSSINIHQMSLDEIFKLFIEEQDLAYKFDGKILKISA
                     LQTRIFKINYITSVREGQSITKASVDSKPRQSEYYSAFEDNEDNMIKSMEKFDFWQNI
                     EKEIMILLSSSHENYDIKAPIVNPNAGLVIVTGTHSQLQRVKAYLQKLESRLKKQVII
                     DVSILAVNLNKNHSSGINWQNFNIGLNSQTSDNTNSFMQIQNGQGFVKNLGLRANLNF
                     DSIVNFLSQSGKTSVLSNPKLMALNNQQAIISIGDTVNYQVKESSKGTENGTTVSESY
                     SNYSIFIGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKL
                     SSVVQVENNQTLILGGLISHNRSQNDNSVNFLSKIPILGSLFRSEDENSNITEIVFII
                     TPSIVDNTHIPSLRELGFKYNE"
     gene            36910..37506
                     /locus_tag="R8X70_000037"
     CDS             36910..37506
                     /locus_tag="R8X70_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2927859.1"
                     /translation="MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLAL
                     YHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGMYSPNVLELIRIYSDEMSFVLSS
                     HKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
                     RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK"
     gene            37503..38099
                     /locus_tag="R8X70_000038"
     CDS             37503..38099
                     /locus_tag="R8X70_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HEF2927860.1"
                     /translation="MNIEERVRELEDKYKRYLLKKYFKFLFIFAILIACMLISFFMVQ
                     DFYKQKALALEALEYKKTLNWQITQAQIANEKNKILQERLSKDESKDELEEELKTQID
                     IYSKILNISDLKRSFYQNPSYQKAMNLATQYYENKDYEKSIFWSLKANDIDRKNSDSW
                     VLFAKAKQALGKDEEAKQALDTYVSYYGLIEFDKEIDD"
     gene            38092..39654
                     /locus_tag="R8X70_000039"
     CDS             38092..39654
                     /locus_tag="R8X70_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HEF2927861.1"
                     /translation="MIERFLFEDYINGKITLEQIDREHKIDSEIFLKALASDKNISYS
                     TLEELDLSLGEKFPCSFLFKFKILPILSKENTLHIASSKPCSLELLDEIRIFYEVKNI
                     EVLIASEFKIMKFLYKLQVREKLKNLSTNLRLEWKENRSQDEQSCISQIFDFILDEIL
                     EFNPSDIHIEARENDTLIRFRVDGILREFACLEKDIYEALVFHIKFLSQLNVAESRKA
                     QDGNFELKIKENRYDFRISSLPLQNGESIVIRILKHNEEILDLENLNLGEKNLTILKK
                     ALYNPYGMILLTGPTGSGKSTSLYACLNELKSIEKKIISVEDPIEYKMPLIQQILLNP
                     KAGLEFNNALRAILRQDPDIIMVGEIRDEESLDIAIKASLTGHLLLSTLHTNNAISTI
                     DRLIDMSAKPYLIASALRLVIAQRLVRKLCPKCKQKSTKVYEIKGDFFEAKGCEYCHH
                     SGYQGRELISECLYIDEEIAQVIREGGYKNKILELAKVKGFQSMFEQGLQKAKEGITS
                     IDELLRVLNEAL"
     gene            39641..40816
                     /locus_tag="R8X70_000040"
     CDS             39641..40816
                     /locus_tag="R8X70_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEF2927862.1"
                     /translation="MKLYELEIKGKTKQTKHLRAKNLNEAQAKAIAKKWEILNIKEIQ
                     KASFKRLDDARFILFFQELSLLCEVGISIKDALKELDKIYSHKMIAKLCDNLNLGQNL
                     SLAFENANFGLTHAELALIKTSQNTGKLSEIFMQISRLRQNNVENEQRVKKALRYPLI
                     VFLSVCAAFVLLMLFVVPNFKDLFEDLNLALPFITELIIYIYNFLDKYILLVFCLIAL
                     ILFLTLFLYRKYYFFSYFCDSLLLKLPLLSKFIIYQQNYSFFMIFSLLLKSGISLLEA
                     FKLATLALNNKKVLLYYQEIRTFMDSGLEISHAFKKVDLFDPLVFSMLSIAMKSSKLE
                     FLSEEIAKYYKNKSENLMDKFLSFLEPIMTLWVAILVLFLALGIFLPIWELSSGVNF"
     gene            complement(40813..41577)
                     /locus_tag="R8X70_000041"
     CDS             complement(40813..41577)
                     /locus_tag="R8X70_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEF2927863.1"
                     /translation="MGFEHLDTIYYFVLFFVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAYGIFFTALGAAIGSYSVLFVKDEH
                     LKLIILIFLTLTFLYTALRPSLGKHESEAKIKNIKFFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMKKASINTKILNFTSNVVALFIFLWRYELLWIVGLLMGVGQILGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFS"
     gene            complement(41580..42344)
                     /locus_tag="R8X70_000042"
     CDS             complement(41580..42344)
                     /locus_tag="R8X70_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HEF2927864.1"
                     /translation="MKNFTPLKNKLDSLVEEKNTNKALFESPDPLQVAKFHNDEFIAL
                     LCALFAYGNAKNIVNFLKKLDFSLLDLSQKQIQKELKNLKYRFQNEKDIQEIFLTFAR
                     LKNEISLHELFSTAYQKRENTTDAILAFLQKIKTLNSYSSYGYDFFFGKIWQNTPTSP
                     LKRYNMYLRWMVRKDELDLGLFTKIHTKDLLIPLDTHTHKISLTLGLLKRKIYDYKSV
                     LELTHNLKRLDANDPIKYDFALYRLGQNKELSKLKE"
     gene            complement(42361..44187)
                     /gene="flgK"
                     /locus_tag="R8X70_000043"
     CDS             complement(42361..44187)
                     /gene="flgK"
                     /locus_tag="R8X70_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HEF2927865.1"
                     /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTAIESIVRLHDEYSYYKLKGASNQLEYTKYMASTLQEIAQRFP
                     DLQNTGILKDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK
                     VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPGHQYNLSIEGFSIVDGINFHPLKLNYDDKNKSYSIYYET
                     PDEKVRDLTAKINGGQLGAQLDLRGRNYSKSKGKYEDGIIQGYMDSLDTFAKTMINET
                     NNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITID
                     VNTTMNDIMRQINANTDDNDNKNSNDDVDDHINASFSYDAKTGDSLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTNASDMKVKDSILNDPSTVRASLNGVDSGNDMANKIIQ
                     LQYDKVNFYNEDGTIDNLTMEEYYRKLTGKIGSDGENNNVVNASNQTLYNSVYSEYQS
                     KSGVNTNEELAALIQWQSSYGAAAKIVTTVDQMLDTLLGLKS"
     gene            complement(44197..44631)
                     /locus_tag="R8X70_000044"
     CDS             complement(44197..44631)
                     /locus_tag="R8X70_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HEF2927866.1"
                     /translation="MLKQRLDEVNAILAKLIELTQEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAK
                     FVLIVKDFLDSLVNKMFDINDGTNNAYGDKKTNPESIFKINV"
     gene            complement(44670..44867)
                     /locus_tag="R8X70_000045"
     CDS             complement(44670..44867)
                     /locus_tag="R8X70_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HEF2927867.1"
                     /translation="MINPIQQSYVANTTLNTNRIDKETKTNDTQKTENDKAARIAEQI
                     KNGSYKIDTKATAQAIADSLI"
     gene            complement(44930..45271)
                     /locus_tag="R8X70_000046"
     CDS             complement(44930..45271)
                     /locus_tag="R8X70_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927868.1"
                     /translation="MKMDNFLNTYNMNSALLDRAAKARSLESSIKINDNDIVTKSKED
                     EALKEQTDAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFS
                     KLLYDFLKERG"
     gene            complement(45271..46317)
                     /locus_tag="R8X70_000047"
     CDS             complement(45271..46317)
                     /locus_tag="R8X70_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HEF2927869.1"
                     /translation="MRVLTFFLLLMTSVFATQIKDIANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTARPGGAGSHSTAATVMGG
                     ANVEREIPQNFSQNNDLTLSLKVADFKTANDIERVLNTVFGEEVAKAIDSRTVKLKKP
                     EDLSNVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDIEVEPVLITHKDITIKIDP
                     NNNAAAAQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            complement(46380..47069)
                     /locus_tag="R8X70_000048"
     CDS             complement(46380..47069)
                     /locus_tag="R8X70_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HEF2927870.1"
                     /translation="MNNKFISVKDFLQGKKNIHFNDSTQPNKKEKTKKTLPKLYTSIE
                     SGIYKGKKLLLPSLQTTRSTKSIVKKCVFDVLRSDLRNKIFIEAFGGSALMAAEALSN
                     YALKAYAIELDLNAYKIALENAKNIDTNLKVIHANTFEILPKLIEDSKEDIILYLDPP
                     FDIREGFSGIYEKIYNFLEKLKLDALFYIVLEHNSKIKTPDNIANFTKIKEKKFGSTS
                     LSFYQKNILEE"
     gene            complement(47062..47445)
                     /locus_tag="R8X70_000049"
     CDS             complement(47062..47445)
                     /locus_tag="R8X70_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEF2927871.1"
                     /translation="MKISLECKDLIIEKALELFLKEHLVMKKDCDFIISDEKISTQKP
                     LFIIAKNSPFLSLPFSKEALMNSLNEFDSALKATAQKLADERRRVLEARIDEIASEFK
                     RDYQSKIDLAISELKDKLVKALMYE"
     gene            complement(47442..48515)
                     /locus_tag="R8X70_000050"
     CDS             complement(47442..48515)
                     /locus_tag="R8X70_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5644 domain-containing protein"
                     /protein_id="HEF2927872.1"
                     /translation="MKNLELRIFRFDKQKDYEAYYKPYVYDNYENFATLYDLLLQVQD
                     DDIYFDFEKNDKSYIVVNKEFLPLNTPLDILVKKYDFNLIIEPLSTKRSVKDLIINKD
                     DFLEKFKYLAPFANEEDKKLYEKYDYLYYSSEILDFLPEYMGDAVFYLTSKMIEKYPD
                     KKIKILKTICDTQKGIFYHLTSKNEDLENTIKNLQKEIIDLKLINEAALEFDLPKINA
                     FDNEIKELGEVKYDFDNFNIACYGFKIKDDIKSKIKAHFISYENSDKNNGFSLLQLNP
                     ELSYKMAANIILDAYDSGADFMVVNQAKDFYMFDTCSKKLMQSSGREFKDFYVLSYFE
                     FLSLIQGIKNPSLQNHDLKVSLI"
     gene            48597..49418
                     /locus_tag="R8X70_000051"
     CDS             48597..49418
                     /locus_tag="R8X70_000051"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEF2927873.1"
                     /translation="MNKEDFIIKAFLNEKNGDDGAIIDDWCFSKDLFFENVHFKREWF
                     SLEQIATKAMLVNISDAIVMNAKPKYALLGLALPNSLGEDEIKALQKGFLKTAKKFNI
                     KIIGGDTISNDKIDISITIISKVRNKAIFRKGLKKGHLLAYTGVLGKSLRGLEILQNG
                     GTLNSNHVFIKPKLRPDFFYEIAPFISCAMDISDGLSKDLSRLLAQNKCGISWFKKLD
                     DYALYSGEEYEILFAFDEKERQNIETIAKKHGVKLNIFGKAVKGKYEFRGREHHF"
     gene            49387..50505
                     /gene="truD"
                     /locus_tag="R8X70_000052"
     CDS             49387..50505
                     /gene="truD"
                     /locus_tag="R8X70_000052"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HEF2927874.1"
                     /translation="MNLEEENTIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYEFSG
                     KGEHLILHINKKDLTTNEALKILSELSGVKIRDFGYAGLKDKQGSTFQYLSMPKKFES
                     FLSNFSHPKLKILETFIHENKLRIGHLKGNSFFIRLKKVMPSDALKLEQALMNLDKQG
                     FANYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     HFANDFSEKELIQIYKISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     RRFKARDISAMGLLIGAKAYETGEGLALNLENEIFKDTLEFKAKMQGSRRFMWGYLEE
                     LKWRYDEEKAHFCMEFFLQKGSYATVVLEEILHKNLFE"
     gene            50740..51012
                     /locus_tag="R8X70_000053"
     CDS             50740..51012
                     /locus_tag="R8X70_000053"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927875.1"
                     /translation="MEKGFELIKAKNNNANMDFYSPETLKNFDEKRYKYLKSKDFRLY
                     GSVKGYQYMIFSVNKDKSDKREFWALICEDSKVENCKIENATGRGV"
     gene            complement(51098..52195)
                     /gene="prfB"
                     /locus_tag="R8X70_000054"
     CDS             complement(51098..52195)
                     /gene="prfB"
                     /locus_tag="R8X70_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEF2927876.1"
                     /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWNDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDA
                     PKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGF
                     KVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELMKQQDSANAGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKAE"
     gene            52269..53588
                     /gene="rimO"
                     /locus_tag="R8X70_000055"
     CDS             52269..53588
                     /gene="rimO"
                     /locus_tag="R8X70_000055"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEF2927877.1"
                     /translation="MSKLYLMSLGCNKNLVDSEIMLGRLSAYELCDEPSKADVLIVNT
                     CGFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIIAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIKGI
                     RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSVPNSFLRTGFIVGHPGESEADFEELCAFVKDFGFDRISVFAYSKEEDTAAFD
                     MEQVSFKVINKRLKIIEKIVDEVIEKSFEKEVGQKRLVVCTGESSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
     gene            53578..54543
                     /gene="tilS"
                     /locus_tag="R8X70_000056"
     CDS             53578..54543
                     /gene="tilS"
                     /locus_tag="R8X70_000056"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEF2927878.1"
                     /translation="MQIKDEILALLKKGKNLLAFSYGSDSSALFYLLMQEKIDFDLVM
                     INYKTRKNSDLEELKAKELALRFHKKIFIKHAPKFQSNFEKKARDFRYDFFEKICLEQ
                     DYDHLILAHHLNDQFEWFLMQLSRGAGLAEILGMQECEKRQNYTLLRPLLFISKDEIS
                     SFLKEKDIFYFHDESNENEKYFRNYIRKKFSNAFVSKFHQGLKRSFSYLDEDRKKLYD
                     FENIKEIQGLLICPKNESLIARAVKMKGLLLSTAQRKEFLKGDCVLGGKIALVYKNEQ
                     AIVFEYETCQKLPKNFKEECRIAKIPRLLRAYLYNHKIDISSLSF"
     gene            complement(54526..55239)
                     /locus_tag="R8X70_000057"
     CDS             complement(54526..55239)
                     /locus_tag="R8X70_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HEF2927879.1"
                     /translation="MRILRLAIKDFFTLQFLKFALIPLVFSFILMVFLAVFGFSALLN
                     YFNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVVFASVFLALFITSFLTPFI
                     AKEINQKYYHYDNTNEVSTLKTIFEIFKIFIKFIGIFLLCTLALFLPFINIFVYYLAF
                     YYLFHKLLMIDITSTILDKESFKSFHSDFSPLEFKFSTLCFYLLSSVPLLGLFLQVFF
                     VIFLTHLAYQKILKLKAKA"
     gene            complement(55241..55930)
                     /locus_tag="R8X70_000058"
     CDS             complement(55241..55930)
                     /locus_tag="R8X70_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEF2927880.1"
                     /translation="MKNVEILENMLKLQQKLNDETNGLNWEEGYTKEGKLISWRRCIY
                     MECAELIDSFAWKHWKNISSPTNWENVRMEIVDIWHFILSLLLEEYTNKKDKNFQAIA
                     NEIICVSVFQDFCKEEGNPSENDLYSILNDIELIIHKCSGFGFSLGELLSNYFILAIK
                     CGLNLEILYKTYIGKNVLNIFRQNNGYKDGSYKKTWNGKEDNEVLAQILEQELDFDAI
                     YKKLEECYKKA"
     gene            complement(55970..56533)
                     /locus_tag="R8X70_000059"
     CDS             complement(55970..56533)
                     /locus_tag="R8X70_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2927881.1"
                     /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSLSYSNDEEGKSL
                     NLKRQYGFSFTFEGSKLTQADLDEIKNAMKEVEPMIKDFLANSKVGELKPKEIIESAM
                     QMANVLPTPNDKNHQNAIMNNFTNKLSDLLKQNQSNDKDINTSMLEDSKKLLDEVLEQ
                     MKKQLEKQQEKAKENQNNAEKGLNLYA"
     gene            56610..57026
                     /locus_tag="R8X70_000060"
     CDS             56610..57026
                     /locus_tag="R8X70_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927882.1"
                     /translation="MDERILEFIKNEQLLSWAMSDEKGVYIANAFYVFDEKNLAFIIA
                     SHEDTKHIKLASKNPSIALNIAKESKIAFLKGIQAKAKFKSASKEQIKIYFSKFPFAK
                     LDKSAKIYALELDWLKFTNNALGFGKKLEFYKDKIL"
BASE COUNT        19722 a         7919 c        10103 g        19283 t
ORIGIN      
        1 aaatgagatt ttaaaaataa agaagtatta aattttgtga tataatattt gtaattttat
       61 aattacaaaa gagatgacaa tggaaccctt atttacaact caaattttaa aatataaagg
      121 caaagattta tttacttgtg atgatacttt agtgcgtgaa atcaagcttg aaatttttat
      181 caatgatgaa aaagtaggcg ctttaatggc aactcctgta gatgagcaag ctttggcggt
      241 ggggtatttg atgagtgaaa atatcattgc taaggtgtct gatatagaaa gcatagaaac
      301 taaagatgat ggcatgagtg tgcatatcaa agccaagatt gataaagaaa atttagctaa
      361 actcaatgct gaaggtgtgg tgataagtgg ttgtggtaga gctcatacag ccaatattga
      421 cccacaaagt atagaagcaa gtaaaattac aagtgaggca aaatttaata aagatgaaat
      481 tttaaaacaa atgagtgaat tttatactca atgcgatctt tatgaaaaaa caggttgcgt
      541 gcacacagcc aaactttttg tcgataaaga tacctttttt ataggtgagg atatagccca
      601 gcacaatacc atagacaaag ctctaggaaa ggcaagactt gcgggagtag agcttagcaa
      661 atgcttttta atggttagtg gtaggcttag ttctgaaatg gtggctaagg cagtgatgca
      721 caaaattcct gttcttgttt cacgcacagc tcctacttgt ttaggtgtca tgatagcaag
      781 aaaatttgat ttaacacttt gtggctttgc aaggggtgaa aatatcaata tttatagtgg
      841 agaaaataga attaatggat aaaaataaag aaatactagc ttatatgaaa gagcttttaa
      901 atagcaatga aaagcttgat tgtggaacgg cttttaaaat cgctaaaaaa tttgatgtag
      961 ctatagaaga gataggcaaa atagcagata tcaatggaat tcgcattgat aattgtgagc
     1021 ttgggcaatt tggccatctt gattttgaaa aagcaaaaat agaagtttta agaaaggtag
     1081 agcctagctt agatgaaaag cgtaaaattt tttgtaaaga tgcaagaaat attgccaaag
     1141 agggttgcgg attaaaatca atgcgttctg ctttaaaagc atataaaatc gatgtaaaat
     1201 attgccaact tggttgtttt aaagaaaaaa aaggcaagca gtttgtagtt aggactaaga
     1261 cttggataga aaatgcagac ggagatttgc tttttggaaa aggaaaaacc gagcttttag
     1321 aactcatagg gcaaacagga agtttgcttc atgcttcaaa acttatgggg ataaattata
     1381 aaaaagcttg gatgcattta caagttttac aaaaaaattc tcaagaaatt ttagtaagtt
     1441 caagacaggg tcgctctaaa gagtcaggca ccaaacttac accaagggct atggaactta
     1501 tggaaaatta cgctactttg caaaaagata tcgaagaata tgccaataag cgttttaaag
     1561 aattattttt taagcataaa aaataattgc taggtttggt tttgtaattt taaatgcaag
     1621 taattttaat aaacttgcat atttccttga tttaaagaca aaaaaagcaa gaaagtatta
     1681 ttattttgtt tattaaatga aggagaaata atgagaattg attgtagaaa tctcgagtgt
     1741 cctaagccta ttgttgagac aaaaaaagca ctccaaaatc ttcaaaataa tgaaatttta
     1801 gaaattgtgt taaattctgt tatttctaaa aataatgttt tgaaattttt aacttctttg
     1861 aatttgcatg ctgatattga agaaaataat aatgaatttt atataagagt aaaaaaacaa
     1921 gaacttgatt tttccaaggc tagtacagat gaatacaatg ttttattttt aaagacagac
     1981 aaagtaggcg atggcaaatt aggagaaaat ttacttgtag gttttttaag tactttaaaa
     2041 aatgtagaaa atatcccaag taaaattctt tgtgtcaatg aaagtgtttt tatcaatgta
     2101 gatgagaacc atagggctca tttagcaatg aaagaacttg aaaaattagg tgttgagatt
     2161 ataagctgtg gagcttgttt agaatttttt ggaaagagca aggagcttaa gataggaagc
     2221 attggcaatg cttatgagat tttaaatgag ctttgtggca aggcaaaaat catcacttta
     2281 taaggaaaat atggaataca aaaaccagaa tctaacgcac tttgtaaaag cagcaggttg
     2341 agcagcgaaa ttaagcccgg gcggtcttaa aacaatttta aatttcatgc aaacaagccc
     2401 agctttactc agtgatatcg gcaataatga agacgcaagt gtttttcaaa ttagtcctga
     2461 attagcctta gtgcaaacgc ttgatttcat cacacctata gtagatagtg cttatcattt
     2521 tggtgctatt gctgcagcca atgctttaag tgatgtgttt gctatgggtg cagaggtgat
     2581 taatgcttta aatatagtgg gttttgatac ttgccatcat gaattaaatg tcttgcaaga
     2641 attattacaa ggtgcaaatg acaaggttca agaatgtggt ggcattatcg ttggtggaca
     2701 tactatagaa agtggtgagc ttttttttgg acttagtgta acaggaaagg tacaccctaa
     2761 aaaatttatt gctaataata ccgctaaaga aggggatttg attcttttaa ccaagcctct
     2821 agggacgggt attttaagta cagctttaaa agctcaaatg ttagaagaaa aacatttaga
     2881 tcgtatgctt gaaagcatga tggatttaaa ttataaatcc agtcaaattg cacttcgttt
     2941 cggggttaat gccatgagcg atgttacagg tttcggtttt ttaggacatt taagagagat
     3001 gttaaatgat agtatttcat ttacagtttt taaaaatgaa cttccttatt tagagggtgt
     3061 gaaagaatat tttgatatgg gtttgattcc tggtggagct tataaaaatt tagatttcat
     3121 tcaagagttt taccctggtt taaatgagga agatttgctg ctttgtgatc ctcaaacttc
     3181 aggaggactc ttaatcgcta tagaagagaa aaaagcttta gaatgtctta aggctttaga
     3241 agatgaaaat attaaagcta aaattgttgc caaagcagta gctaaacaag atgatagatt
     3301 tatattttct taatttttgt tactcatata ctcataaaaa ctttttttaa ttctttttta
     3361 tacatttttt taaatttaaa atgttatttt taccttattt ataatatcat ttctagttta
     3421 aatattattt tatccttagg agatgtaaaa atgatacaaa aatccttagc tttagctgaa
     3481 gaattgcaag gaaaaataga agcaaacatt tcaaattctg aaaaagaatt ccatgctaaa
     3541 atgcaaaagc ttcttaacaa tcctgaaaat aaagtcatgc tgatcgaatt gctcgatcgc
     3601 tcttttagat gtaaagataa aagagcaagt tttgagctta tcgaacatac tttaaacaag
     3661 tatggtatag cggatttttt tagtgccttt gagaaattct tactctttag ctttttaaat
     3721 tttggtaaat tcgcacctaa tttaagtgtg ccattttttg taaaacattt aagagaagat
     3781 actaaagcta tggttttgga tgcaaatcct agtgttttag aacctcatat gcgcaaaaga
     3841 aaagatcaag ataatatcac tttaaatgtg aatttaattg gcgaagaggt tttaggcgaa
     3901 gcagaaagca aataccgcat tcaaaaatat gaagaagctt taaaatcaag ctatattact
     3961 tatatttcga ttaaaatcac tactattttt tcacaaatta atattattga ctttgaatac
     4021 tccaaggatg aagtggttaa aagacttgat catctttatg ctttagcctt agaagaagaa
     4081 aaaaagcagg gtgtgagtaa atttatcaat cttgacatgg aagaatttag agatttggaa
     4141 ctaaccgttg ctgcctttat ggaaagtgtg tctaaatttg atattaaagc aggtattgtt
     4201 ttacaagctt acatacctga ttcttatgag taccttaaaa aactttttgc cttttcaaaa
     4261 gaaagagttt taaaaggaat gaagcccatt aaaattcgct ttgtaaaagg tgcaaatatg
     4321 gaaagcgaag agacgatcgc aagtcaaaga ggatgggagc ttcctacttt ttataaaaaa
     4381 atagacacag atagtaacta caacaaaatg ctagattttg ttttagaggg agataattat
     4441 aaatatatca atgtaggtat cgcaagccac aatatctttg aaatcgctta tgcttacaca
     4501 cgcatcagtg aagcaggagc tcttgattct ttcacttttg aaatgcttga aggtatgagt
     4561 ttgcaatgtt cttatgaatt atctaaaatg catgatttaa ttctttatgc acctgtttgt
     4621 gatgaagcac attttaataa tgccattgct tatcttgtaa gacgccttga tgaaaataca
     4681 agcgaagata atttcatgag atattttttc aatctcaaag ttggggataa taactggaat
     4741 gtgcaaaaag aacttttctt aaaatcttta gaaggaatta aaacgcttga taatagcaca
     4801 caccgcaccc aagatagaaa caaagctcca aatatagtaa gtgcttatga aagtggaatg
     4861 tttaataacg aaagcgatac ggattttatt ttgccacaaa atagagcatg ggctaaagtc
     4921 ataagagcta aatatgaaaa tttagaaaat tatgatgtaa tgcctgtaat cggagatttg
     4981 gaatttgata aaaatacttt aaatatttta gaagttaaag ataaaatcaa agatagaatg
     5041 ataggaaaag cttatttagc aggcgaaaat gaaatcaaaa aagctcttaa agtagctaaa
     5101 aattctaatt ttaaaaatac aagttttgat gaaattcatg ctattttagc taaggctgca
     5161 aatttgatga gagagcgtcg tggggatttg ataggtttgg ctgcacttga agtaggaaaa
     5221 actttcttag aaattgatcc tgaagtaagt gaggctattg attttactga attttatcca
     5281 cattctttaa aggttttaag agagcaaaat aaaaatactc aatttagccc taaaggtata
     5341 ggagtaacca tagctccttg gaatttccct ataggtattt cagttggaac catagcagca
     5401 ccattagcag cgggcaatgt cgtaatttat aagccttctt cgctttcaac tttaacaggc
     5461 tatatgcttt gtaaatgttt ttgggatgca ggaattagca aagatgcttt gattttcttg
     5521 ccttcaaaag gaagcgatat ttctaaatat ttacttgttg atgaagcggt gaaattttct
     5581 atacttacag gtggagaaga tacggcttat gctatgctta aagcaaatcc taccttactt
     5641 ttaagtgctg aaacgggtgg taaaaatgct acgattgttt ctaaatttgc agatcgtgac
     5701 agcgcgatta aaaatattat ccattctgct tttagcaaca gcggtcaaaa atgctcggct
     5761 acttctttgc ttgttttaga ggaagaagtt tatgaagatg aagaatttaa aaagacttta
     5821 gtagatgcag ctgcttctat ggctgtagga aatccttttg aatttaaaaa taaattaggc
     5881 acattagcag ataagcctag tgctaaagta gaaaaagcct taaatgaact agcgccttat
     5941 gaagaatggg ctttaaaacc tcaattttta gaaaacaatc cttatttgat gactccaggg
     6001 ataaaatacg gcaccaaaaa aggtgatttc actcatatga atgagctttt tgtaccgatt
     6061 ttaagtgtaa tgaaagcaaa agatttaaaa gaagctatag agatagtcaa ttcaacaggc
     6121 tatggtctta ctgcaggatt tgagagctta gatgaaagag aatgggagta ttttcacact
     6181 catatagaag caggaaatat ctatatcaat aaacctacaa caggagctat agtacttcgt
     6241 cagccttttg gtggggtgaa aaaatctgct ataggttttg gtagaaaagt gggaatttat
     6301 aattacataa cccagttttt agatataagc acaagtgaag ctgatgagaa tttgctcaat
     6361 aacgaacttg ttaaaacttt agaaaaaata gatcttggca caaatgaaga aaataaaaaa
     6421 gctttaaaca atgctatttt gatggcaaaa tcttatgcgt atcattacag aaatgaattc
     6481 agtgtttcaa aagattatgt caatatacgc ggcgaggata atctcttttc ttatactaag
     6541 attaaaaatt tagcttttag agtgtgtgag aatgataatt tgcaagatat tttaggagtt
     6601 atcattgcag ccaatatctt aaatatccca ttgagcgtga gctatgaaga aaacgataaa
     6661 atttctttag taaaagaact ttgcaaagct ataaatctaa accttgaaat cacaaatgaa
     6721 agcaaagctc aatttgtttc aagattgaag aattttgaga gaattcgcta tcatggaaaa
     6781 gtgagtgtgg aagatgaaat ttatcaagaa gcggcaaaag aagctaagat tattatcaga
     6841 gaaaaaccat tattaaatgg tcgttttgag cttttatttt atcacaacga aaaagcttta
     6901 agtgtatctt tccatcgcta tggaaattta ggcattagag cgttaaatca ttaaaccaag
     6961 gagtaaaaat ggaaacagtt caaattaata cccccatagc gataatgttt gtggcatatg
     7021 ctgctttaat gctttatata ggtttttatt tttataggca aaataaaaat acagaggatt
     7081 atttcctagg tgggcgttct ttaggtcctg tagtttctgc actaagcgca ggggcttctg
     7141 atatgagcgg ttggcttttg atgggtttgc caggggcttt gtatgcgagt ggacttatag
     7201 agagttatat tgctatagga cttagcatcg gagctttatt gaattggagt tttgtagcaa
     7261 aaagacttag aatttataca agtgtgattg caaattctat tacaatacct gattatttcg
     7321 aaacaagatt tgatgatgat aagcatattt tgcgtatagt ttgtgcgatt gtcattttga
     7381 tattttttac cttttatgtt tcatcaggac ttgtgggtgg agcaaaatta tttgaagcaa
     7441 cttttggtat aagatatgaa tatgcgctta ctactgggac gcttattatc gttgcttata
     7501 cttttttagg cggatataaa gcagtttgtt ggacggattt gcttcaagga cttttaatga
     7561 tgggtgcatt gatcgttgtt cctgctgtta tgctttatca tttaggtggc tttggtgagg
     7621 ctatggctgt tatagaagaa attaagccta atgctttatc catgggtgag ggtataggag
     7681 cattaagcat tgtttctgca cttgcttggg gcttgggata ttttggacaa cctcacattt
     7741 tggtgcgctt tatgtctatt cgctctacta aggatattcc tgcggctacc tttgtaggaa
     7801 tttcttggat ggtgatttcc ttgataggtg cttgctttat aggtctttta gggatagctt
     7861 atgtgcataa atttgagctt actcttcaag atcctgaaaa aatctttatt gtaatgtcgc
     7921 aacttttatt taatccatgg atagcaggta ttttactcag tgctattttg gctgctatta
     7981 tgagtactgc aagttcacaa cttcttgtat caagctctac catagcagag gatttttata
     8041 aaagaatttt caacaaagaa gcatctaata aaactgtgat gaatttggga agaataggcg
     8101 ttttactggt agcattggtt gcttttgtga tttcaacaga taaagaatca agtgttttaa
     8161 gtattgtagc ttatgcatgg gcaggatttg gagcaagttt tggttctgta atgcttttct
     8221 ctttattttg gagcagaatg acaagaatag gagcgatttt aggtatgata acaggagctg
     8281 ttatggttgt tctttggaaa aattatttag cagaactctt taatttccct atttatgaaa
     8341 tagttccagg ctttgtagct gcttcagcag tgataatcat tgcaagctta cttactcaag
     8401 tacgcccagg aactaaagct gcatatgaaa gaatgttaaa agaactttaa gattttttag
     8461 aaaatgagga tatttgttta aatatcctcc aaatttccta cttttttatc tcaaaatgaa
     8521 attttttgcc ccagctttta aaattaaaac tagagcaaaa gtttatcaac tctttaaatt
     8581 tggagccaaa tttaaggctt ttggattaaa aaccgaagtg tgggaccatt ttgatcgatt
     8641 tcaagaattt taaaaccacg attttttgca tcttgaggta tagaattgat actttgtgga
     8701 caatcgcaaa gcacttctag gatttctccg cttttaagtt gcggcaaggc atctagcgta
     8761 gcaatagcag gataaggaca agcttcacct tctaaattta aagtataagt aattttcatt
     8821 ttttatcctt tttgatttag tttttgaaag aagtgttttt tataaaataa aacacaagca
     8881 aacattaaaa taaaaagagc tagatttatg aaaaacccac ccaaatttcc aaattcattg
     8941 agcaagttaa tttttacgcc ctctttgaaa gcgctaggta aaaagtcata agttagagcc
     9001 aaaatcatcg ttcctatgat gtttgcaata cccactatca taaaatgact ttgtccctcg
     9061 caagcacgat aagtccatcc gcattcacaa ccccctgcga aaactatacc aaaaccaaat
     9121 aaaaatgccc caatagccac agcaggagag agttcgatga gtttgctatt gtgtccatgt
     9181 aagatgaaag caaaagcgat caaagaagcg attatcatac cgattaaagc gccttttata
     9241 gcattttccc taccaaataa gaataaatct ctaaaacaag cagtaaaaca aatttgtcct
     9301 ctggagatga taaaaccaaa cgcaaagcca aaaatgagtg ctaaagctaa aagactttgt
     9361 ttgctttgtg tgcttatatt gccattaaca agcacaagat aaaacaccca tattaaaaat
     9421 gctacaaaaa gaatactacc taaaacaaaa tgaaatttcg cacgcgagtt ttgtttgagc
     9481 aaaggaatgt tttctttatt tgcacattgt aattttgctt taggtttaaa aaaggaagtg
     9541 ttacaaagtt ttacaccaag ataaattccc aaaaccataa aaacaccaaa aaaccaagta
     9601 tgcagtgaaa aataaggcaa gcctgtaaaa aagtttgcca agttacaccc aaaggcaagt
     9661 cttgctccat atcctgaaag aattccacct actattgctt gaaaaattct tatattgcta
     9721 gcaggtagac gaaatttgac tttgttagct aaaagtgcgg ctactaaaca acctataaac
     9781 atgcctataa gcatgattcc atcggttctc gttaaaggag taccatttaa attttgcttt
     9841 tgataataag aatatccatt caaatccata cctaaaagct ctaaaaattc tccaccccaa
     9901 cgcgtcattt ctcccgtaac agcccaaaca ccaccaaaaa ttccaaagta tactgcactt
     9961 aaaattccaa gtgttatcat agcacgggaa ttatcccaaa aattgattaa atatttttgt
    10021 ttgaaagaat tcaaagaagt tcctaaatac cgtaatcatc aaaccttgat gctaaaaaaa
    10081 gagtgagatt ataacctaat tttaaactaa agtcaaaaat cagtgatgct ttgataaaat
    10141 ttgaaaattt attttgtttt tcatttaaaa atagctataa ttataacttt ggaagattag
    10201 cgtatctggt gatcgtcact gacttcaaat cagatgaaag ggtagttgac tattctttgg
    10261 ggagttcgat tctctcatct tctcgccgta aaatttaagg aaaataatga gtaaagcaga
    10321 tattattgtt ggaattcaat ggggtgatga aggtaaaggc aaagtagtag ataaattatg
    10381 tgaaaattat gactatgtgt gtcgcagtgc aggggggcat aatgcaggac ataccatttg
    10441 ggtaaatggt gtaagatacg cacttcatct tatgccaagt ggtgttttgc attcaaggtg
    10501 tattaatgtg attggcaatg gagttgtggt atctcctgaa gttttaatcg ctgaaatggc
    10561 tcaatttgaa aatttaaaag gcagattgta tattagcgat agagcacatt taaatttaaa
    10621 gcaccattct ttgatagata ttgccaaaga aaaactcaaa ggtaaagatg ctataggtac
    10681 gacaggtaaa ggtataggac cttcttatgc agataaaatt aaccgcaccg gacatagagt
    10741 aggagagctt ttagatcctc aaagacttca caatgcttta atgaaagatt ttgaagcaaa
    10801 taaaaattat ttagaatttt tagggattga aattcctgat tcagatgaat tacttagtga
    10861 tttaaaacgc ttcaatgaga ttttaactcc gtttataacc gatactacaa gaatgctttg
    10921 gaaagctttg gatgaggata aaaaagtgct tttagaaggc gctcagggct ctatgcttga
    10981 tattgatcat ggaacttatc cttatgttac aagctcaagt actatttcag caggcgcttt
    11041 aacaggactt gggttaaatc ctaaagaagc gggaaatatt ataggtattg taaaagctta
    11101 tacaacgcgt gtgggaaatg gagcttttcc tactgaggat aagggtgaag atggagaaaa
    11161 aattgcgcaa attggaaaag aaattggcgt aagcacggga cgtaaaagac gctgtggatg
    11221 gtttgatgca gttgctgtaa gatatacagc aaggcttaat ggtcttgatg ctttatcttt
    11281 gatgaagctt gatgttttag atggttttga aaagataaaa atttgtcgtg cttatgaata
    11341 taagggcatg gaaatcgact atataccaag cgatttagaa aatgttcaac ctatttatga
    11401 agaaatggat ggttgggata aagtttttgg tataaaagat tatgatttat tgccagaaaa
    11461 tgctaaaaaa tatatagcaa gacttgaaga gcttgcaggg gttaaagtaa agtatatttc
    11521 cactagccct gaaagagatg atactatcat cttatgaaaa gtaaatataa ttctgttgta
    11581 aaggtaagaa aacaacaact tgataaagca gaatcaaatc ttaatcaagc caaacaaaga
    11641 cagcttgaac atgaaaaagc ttatgaactt tcacgccaag agtgtgaaag tttaggcgta
    11701 ttgccaaaat caggatctat agcagagtta agatcaaatt taagtatggc gcaagtagga
    11761 cgcgaggctt tggcaagagc taaggagaaa gtagaacttt ctaaaaaaga aatgaatcat
    11821 tatcagtttt tatatcaaaa agcgcattta gattatgaaa aaatgaaggc tttggaaact
    11881 gaagaaatta aacaaaaaca aaaagaactt gcgaaggctg aagaaaaatt tttagatgaa
    11941 attgcaatca gtcgtttttt caaaagggaa aaagatgatt aaaaaattta tattgttagt
    12001 ttttatttca agtgtagttt ttggagctga acaagattgt gagcagtatt ttgaagctag
    12061 aaaagctcaa attgaattgc aaactagaga atttgatgaa gcaaggcaag ctttagaagc
    12121 ttataaagct tcttttgaag ctttgcaaaa agaaaggctt gaagtcttaa atcaaagaga
    12181 agccgaagta aatgcgactt tagcacagat tgaaagttta aaagaacaaa atacaaaact
    12241 tttagaagag cagcaaaaaa ttttaaattc tatcaatgaa aaaacagaag gtaggattaa
    12301 agaaatttat tcgcaaatga aagatactgc aatagctgat gttttaaccc aaatggatgc
    12361 tgaagatgcg agtaaaatca tgctatcttt agagtctaga aaaatttcag gagtgctttc
    12421 taaaatggat cctgcaaaag cgagcgaatt gaccttattg ctaaaaaata tggataataa
    12481 taaaagcaat taaaaattta attttttaac attcttttac caaaaatata ttattatttc
    12541 aaaattatta gtgaaaaggc ttgaaaatgc gtataaaatt gccacatata ccttatatta
    12601 caaataaaat aatgttagat attgcacatt cctcttttgt tgaaattaaa gataatattg
    12661 aaaagttaaa cccttgcatt aaacaaattt tagaagatga tcttatgaat gaaagaaagc
    12721 tagatgaaag agttaaagag cttttagaac aacaagaaga tgaaatggag cttatgcaag
    12781 tagatcgtaa aaatatgttt tggcttgtta agaaaaaatt agctcctgaa tttggtgtga
    12841 ttttaaattc tgaagataga cacaatcatt tagcgcatag aattttagaa gaacttatag
    12901 aaaatgatta tattaatttt gtggtaagcg aaaatagagt gaaaaattta attttttcta
    12961 gcatagatga ctatcttaaa atttatgaaa aattagaaga tgaggtttat gaaaaaataa
    13021 gtaattataa aacaaaacct attccaggta gcgaagaata tgagcttatt tttgaaaaac
    13081 tttaccaaga agagcttaga aaaaaaggaa tgttttaaat tatgaaagct tatatttata
    13141 tagaaaatga tattttttta actgctaagg cttttggcaa gggtggaact ttttttggcg
    13201 agcttgtatt taatacttct ttaacaggtt atcaagagat aatatctgat ccttcttatg
    13261 cagggcaatt tatcgtattt tctatgcctg aaataggcat tgtaggaacc aatgaaaatg
    13321 acaacgaaag taaagaaatt tttgcaagtg gcgttttgat gagagaatta agccctactt
    13381 tttctaattt tcgtgctcaa aaaagcttac aagaatactt agaagaacat ggaaaaatag
    13441 gagtttatgg actagacact cgctatttgg taaaaatgtt aagagacagc ggaaatttaa
    13501 gagcagttat ctcaactgaa atctctagca aagaagaatt aaaagcagct ttggaaaaat
    13561 ctgcaaaaat agatgagatt aattttgtaa aagaagtaag tactaaaaaa tcctacgctc
    13621 acaaacatgg agtttggaat aatgctaccc aaagttacaa taaggctaaa aaaaatacaa
    13681 aaaaagttgc tgttattgat tatggtgtga aagcaaacat tctcaatgag cttgtggaag
    13741 tgggtttaga agtagaagtt tttccttata ataccaaagc agaagaactt atcaagcttt
    13801 atcaaaaagg tcaaattcaa ggtgtatttc tttcaaatgg accaggagag ccaaaaattt
    13861 taaaacaaga aattgctgaa attaaaaaat tagccgaggc taaaattcct atgcttggaa
    13921 tttgtttagg gcatcagctt ttaagtaatg cttttggata tgaaacttat aaaatgaaat
    13981 ttggacaaca cggagctaat catcctgtga tcaacttaga aaacaaaagt gttgaaatca
    14041 ctgctcaaaa ccataattat aatgttcctg aagagctttg cgaagtagca attataacgc
    14101 atagaaatct ttttggagat aatgtcgagg gtgtaaggta taaagactat cctattattt
    14161 cggtgcagca ccatcctgaa agttcatcag gtccgcacga aagtaaatat atttttaaag
    14221 aatttatgaa tttaatgtga atttccttcc tctaaatttt gactttttgg ctatatttag
    14281 tgtagccttt ttatcgagct ttgggcattg ctattctatg tgtgggggat ttattttagc
    14341 ttttatgaat ttaaattcaa cccacaaaaa tttgttttta ttaactttta tttatcaatt
    14401 atttagaatt ttttcttata ttttgttggg aataatcttt gggatatttg gaaatttatt
    14461 agctataaat gccaaaattc aaagcttatc cttttttata ctcggtgtgt ttatggtaat
    14521 tttaggtttt tctttaattt ttagaggtaa aatccttgct tttatcgaaa atcgcgcttt
    14581 ttttgagtat tttataaaaa agattattaa aaaatctatg ggttttaagg gtgtaaaatc
    14641 ggcaatgatt ttaggttttg ctaatgggtt tgttccttgt ggtttggtgt atttttttct
    14701 agcgaatgca atgagtaggc aaaatgttac agaaagcatt ttggttatgc tagtttttgg
    14761 tctttcaacc cttccagcaa tgcttttttt tgtcaaaata tcacaatatt tgggtgtatt
    14821 tttgaaaaaa gtatttaatt atttatctta tttcattatt gtagcttatg gaataggttt
    14881 agcttatatg ggttttaagg ctttttaaat ggcaaattca gttgccgagc aagttttaaa
    14941 agtaatagaa aaaaagacaa ttttctttaa gatcaatttg caaggtataa ttatcgatgc
    15001 aagtgaaaaa ttttgcaaga taagtggtta tagtaaaaaa gagttgattg gaaagcatca
    15061 ttttatttta aaacatcctg atgttaaaga aagttatatc aatcaacttt taggaaaact
    15121 ttggcaaaaa gaagcttatt cggtggtttt taaaaatgtc gataagctag gcaaaacttt
    15181 ttatcttgac gcatttttaa ttcctattgt agataataag ggtgatttaa atgaaattat
    15241 tgctttatct tatgatatta gcaattcttt taaattaaat gaagaacttg tattaaatca
    15301 tgcgaaattg cgtgaaatta gtgtaaatct tgaaaagaca gctaaagagc gcaaggaaga
    15361 atttgcaaaa ctaagcaaag attttgagta taagcttaaa gttgctttag aaaaaaatga
    15421 gaaagataca aaaaagattt ataaagaaat tttaaattct tctatagagc agatgattag
    15481 cgatattgcg catcagtgga gacaacctct aaatgagctt ggtattgcta tgtttcaaat
    15541 gaaacaaaat gttcaagatg agaagggttt taccgaaatt tatctacaat ctaaaagtac
    15601 gataaaaaat atgtcagaaa caattgatat ttttagaact ttatttaaaa ataatgaaaa
    15661 cgaaaaaaat catgtttctt taagagaaat tttaaataag gtaattggca ttgcttttga
    15721 aaccatagaa aaacatcaag ttaatactcg aataatctca aaaacagatt atagagttat
    15781 agcgcatgag aatggcctaa tgagagtttt tttaaattta attataaatt ccatagaggc
    15841 atttaagact caaaaagtaa aaaatattat atttagtttt tccaaatttg gaaaaaatta
    15901 tattaaagtc aaggttaagg ataatgcagg cggggttgat gaagatattt tagacaaaat
    15961 ttttcaaccc tatattacaa ctaaacatcc tagtcaaggt ataggagcgg gactttacat
    16021 cagcaagcaa atcgtagaga gttttggtgg aaaaattcaa gttaaaaata taaaagatgg
    16081 tgcttgtttt gagatatatt taaagttgca agaggggaat taaattatga aagaattggt
    16141 tatattggtt gtagaagatg aagtaaaaat tagagaatcg cttgttaatg ttttatcttc
    16201 tcgttacagc aaggtaatag gtgcacaaaa tggtgatgag ggtttaaaga aatttaaaaa
    16261 atttaagccc gatttgatta ttacagatat tgctatgcct atcatggatg ggcttgatat
    16321 ggcaaaagaa attaaagaaa tagcaaatga tgttcctatt gtagtgctca gtgcttattc
    16381 ggaaaaagaa agattgttgc gttctattga tataggtata gataaatatt taatcaaacc
    16441 tgtagatgta gatgaacttt ttaaagtttt ggattattta gtgggtgaaa agatagaaac
    16501 taacgcgctt gttgatattt ctaaagagta tcaattcaat aagactaaaa gaatattaat
    16561 tcataaagga caagaaattg ttttaaccaa aaaagagctt gcttttattt cattgctttt
    16621 aaagcagcct ggggttttgg tattgcatga agatattaag aaaaatgttt ggataggtga
    16681 gcatgtgagc gatactgctg ttcgaacatt tataaaaaga gtaagagata aagtgggtga
    16741 agattttata aaaaatgtgc caagtttagg ttataagata aatatcaata aataagactg
    16801 atttagcctt aaaatataaa gcataacaaa tgattaacaa aattatcatt tttaagaaaa
    16861 aatgtataat taatagtcta taatataaac ttgttatcaa aaattttaag gagaaagtcg
    16921 atgcatccag gtaatgtatt aaattacgac tatacggttg caagatattt tatgtttgcg
    16981 accatattgt tcggcattgt tggtatggct ataggaactc ttatagcttt tcaaatggca
    17041 tatcctaatt taaattattt agcaggcgaa tatgctactt tttcaagact tagaccgctt
    17101 catacttctg gtgtgatttt tggttttatg ctttcaggga tttgggcaac ttggtattat
    17161 ataggacagc gtgttcttaa agtaagtatg gctgaatcca aatttctaat ggctataggc
    17221 aagcttcatt tttggcttta tatgattacc atgattgtag ctgtaatttc tttatttgca
    17281 ggtgtaagta cctctaaaga gtatgctgaa cttgagtggc ctttagatat tcttgttgtg
    17341 cttatttggg ttttatgggg tgtaagcatt tttggactta ttggaattcg ccgtgaaaaa
    17401 accctttata tttctctttg gtattacata gctacatttt taggtattgc tatgctttat
    17461 ctttttaaca atatggcagt tccaacttat tttgttgcag aaatgggtaa atggtggcat
    17521 agtgtatcta tgtatgcagg gacaaatgat gctttagttc aatggtggta tgggcacaat
    17581 gcggttgctt ttgtatttac tgtgggtatt attgctcaaa tttattattt cttaccaaaa
    17641 gaaagcggtc aaccgatttt ctcttataaa ctttctttat ttgcgttttg gggcttgatg
    17701 tttgtttatc tttgggcagg tggacatcac ttgatttatt caactgtgcc tgattggatg
    17761 caaactatgg gttcggtttt ctctgtagta ttgattttac cttcttgggg ttcagcgata
    17821 aatatcttac ttactatgaa gggtgaatgg agtcaacttc gtgaaagtcc tttgattaaa
    17881 tttatgattt tagcatcaac tttctatatg ttctcaacac ttgaaggccc aattctttca
    17941 attaaatcag taaatgctct agctcacttt acagattgga ttccaggaca tgttcatgat
    18001 ggaactttag gttgggttgg ttttatgact atggcagcac tttatcatat gactcctaga
    18061 atatttagaa gagagcttta tagcaaatct ttaatggaag cacaattttg gattcaaact
    18121 acaggtatag tgctttattt tgcttctatg tggatagcag gtatcactca aggtatgatg
    18181 tggagagcta cagatgaata cggcaacttg ctttacagct ttattgacac tgttgtagct
    18241 attatacctt attattggat tagggcaatt ggtggtttat tatatcttat aggatttttc
    18301 atgtttactt ataatattta taaatcaatt gcttgtggaa aagtgcttga taaagagcca
    18361 aaaagcgctt cgcctatggc tgcataaaaa ggagagaaaa tgtttagttg gttagaaaaa
    18421 aatccattct tttttgctgt cgctgttttt attgtgattg cttatgctgg gattattgaa
    18481 gtgctgccaa attttgcaga aaatgcaaga cctatagaag gaaagaagcc ttatacggtt
    18541 ttacagcttg caggacgcca aatttatatc aaagatagct gtaatgcttg tcattcacag
    18601 cttattcgtc cttttaaatc tgaaactgat cgttatggta tgtattctgt cagtggcgaa
    18661 tttgcttatg atagaccttt tctttggggt tcaaaaagaa caggtcctga tttaatgcgt
    18721 gttggaaatt atagaactac agactggcat gaaaaccata tgtgggatcc tgtttcagtt
    18781 gttccaaatt ctattatgcc tgcttataag catatgttta aaaacaatgc cgacatggaa
    18841 actgcttatg cagaagcttt aactgttaaa aaagtgttta atgtccctta tgatactgaa
    18901 aatggaacca agttaggtac ttgggaagaa gcacaagctg aaataaaagc cgaagcacaa
    18961 gctatagttg atcaaatgaa aaatcaagag gtaaaagatg cttttgctag gggcgagatt
    19021 aaagaaatcg ttgctttaat cgcttattta aatagcttaa agtaaaaata tggaacattt
    19081 agtgattatt tggaatgtga ttaaaaattt ggtcactttg aatttatcag cagtgcaaaa
    19141 acatgaatgg gaaatttttc aaggttatgg attttttcta tttgtaatgt ttttatcaat
    19201 agtattgtat tcttattggt atcatcttta tagggcagaa aaaaaaggcg agagaaatta
    19261 tgaaaaatat gcaaatctcg ctttgagcga tgatatcgat gatagtgttt tagaaagtaa
    19321 aaggagtgct tgatgcaatg gttaaatttg caagataatg ttaatttatt atctttcatt
    19381 ggagcgattc ttattatatt gattactctt gtagtcgttg gtagaatgtt taaatatatg
    19441 aaagagaaaa aaggtgaggc agaattaagt gagcatagct gggatggcat aggagaatat
    19501 aaaaatgcga ttccaatagg ctgggctgtt atattctttc ttaccatagt atgggcagtt
    19561 tggtattttt tatggggata tcctttaaat tcttactcaa gtataggtga gtacaacgaa
    19621 gaagttaagg cttacaatac taaatttgaa gaaaaattcc aaaacttatc tactgaagat
    19681 aaggtagcta tgggacaaaa tatctttttg gttcaatgct ctgcttgtca tggaattact
    19741 ggtgatggta tcaatggaaa agctcaaaat ttaaatattt ggggtagcga agagggttta
    19801 atcgatgcga ttaaacatgg tgcaaaaggt atgaatttcc caggtggaga aatgcctgct
    19861 gctgcggatt tgggaattgc tgaagaagat attcctgcga ttgctgctta tgtagcaaaa
    19921 gagctttctg ctatcaagaa aacttctaat gaaaatttgg ttgctaaagg aaaagaggct
    19981 tatgcaactt gtgcagcttg ccatggtgaa gatggaaaag gtcaagatgg aattttccct
    20041 gatcttacaa aatacggctc agcagcattt gttgtagatg ttttacatag tggtaaaaca
    20101 ggctttattg gagctatgcc agcattttct atattgaatg atactcaaaa agaagctgtt
    20161 ggtgagtatg taatttctct ttcaaggggt gaataatgga aaacactaat agatgcgtat
    20221 tttctctttc aggtgttacg ggtatgctga ttgctaccgt tttattgctt gcaattttag
    20281 taggtttaac catttggggt cttaaagctc aacaagaagt aatgcaacag ccctacagcc
    20341 ttaaagatat ccaaaatgtt aaaatgcttg gttcaaaaga acaagatcat aaaagcatag
    20401 gagggacagc gcaatgagta aagttttaga atatttgatt gttattggct tagttgtgac
    20461 tgctgcgatt actgcatggt cggttttaac tgcaaaccat cttcatatag gatgagaaaa
    20521 atactacagg atggcttatt agccatcttt ttatttttta tacctgtgca aattcttgcc
    20581 cttgagcctg tagtttttaa tgaaaatata cttaaccaaa aagttgttga tgagattaat
    20641 cttatcggta aagaacttca agaaaaaagc ggaatttttg ccggcgtagc aattggcgat
    20701 aagagtgatt ttcaaacttt attagactta cataagcaac tcccacaatc ttatgttttg
    20761 cttgttttat ctaaaaattc tcataaagtc gatatcatag gttctaaagg agctttaact
    20821 ttaatcgata aagaagctgt gcttagtcct tatccaggaa caggatctat tttgcctatt
    20881 ttagcgacca ataaaggcga tatttataat gcggctattt taaatggcta tggagatatg
    20941 gttgatcgtt tagcacaagc tagagggatt gaattgcaac actctatagg caatgcaaac
    21001 cgcgatacta tcaatatttt aagaatttta atctatggct ttatttgctt tgcgttgtta
    21061 tactacgctc aaagaagaat gaaaaggaag aaaaatgctt gaaagtaaaa aaaccttttg
    21121 gccttatgga attttaattt cgatttttgc tattgtggtt gcttgtgtgg caactattat
    21181 agtggcaagc aattatcctg tatatgagga tgatttttat tttgactctt accaaaatgt
    21241 tgaaaataat tataatatta tccaaaaaca acaagagcaa tttgatacct tgtttaaggt
    21301 tgaatttcaa aatgataaga ttgatttgat tggtaaaaga aagattgcaa gttatacaat
    21361 cagtgcagat tcttatctag cgcaatttaa aataacagcc ttaaatgatc aagcaaatat
    21421 acaaaattta aagagtgaaa ttttacttac aagacctcac acaagagaat ttgatcaaaa
    21481 acttttaggg caaattcaag atggagtttt aagtgtatcc ttgcctcagc ttgaaaaagg
    21541 tagatggcaa ctcaaaatca aacttagcac agatgatgaa ataacaggct tttttagcta
    21601 tgaattaaat gctcaatgat actaagaata tttagttcct caagaaagat taaagaatat
    21661 caagaaaaag caaaggccaa aaacgcttta cttgattctg cttttcttgt atcagatttt
    21721 ttagatcgag tatgcgtggt aaattctttt aaagcaagct cttatgagag cttgctttta
    21781 atgcaagaag cttgtttaaa aagtaaagat ttagaaaaaa aactaggtat ttcagctgaa
    21841 ttttttgctt ttttgaaaaa taacgaatac cttttttctt tttttaaaga attaagttta
    21901 gaaaaaaaaa gtatacaaga tcttaaaaac aatgactatt acgcaactta taatgagcat
    21961 ttagaaattt tagacgaggt ttatgcaaat tatcttcttt tgcttaagca acacaattta
    22021 tacgatgatt tatccttagc tcaagaatat aaacttaatt tagatttttt aaacgaatac
    22081 gaaggtatat attatgattt acaaggtttt ttaagcaaat ttgaagagga tttgttgtgt
    22141 gagatttcta aaatcaaaag cacaatcata agctttaaaa caagcaaatt taatcttgaa
    22201 tacctactag aacttgactt tttaaaagat atacacttgg aacttgatat gttttatgaa
    22261 gtcaatcttt cacaaaaaaa gattttaaaa caagaaaaac tttcaaatcc taacacttta
    22321 gtcaagctaa aggcttttga gcttaggtct ttacaatgtg cttttgttat ggatgaaatt
    22381 tctaattttg tccgagcagg aatagatcct gaaaagatag ctgttatcac tcctgatgaa
    22441 agtttttgtg agcttttaaa actttttgat aaaaacaata tgttaaattt tgctagtgga
    22501 gtaagcatta aagaaagttt gttttatcaa aagatcaaag ccttatataa tggagcaaat
    22561 tcagacgctt ttatctataa gatagatgag aattatttcg aacaagaaaa aatgattttt
    22621 gattatcata atactttgtt gcattattta gaacttcaat ttgaagattt tagaactcgc
    22681 tttgatcaaa tttgtgattt gcagtatttt gaaaatttaa tccacagttt tttaaaagat
    22741 gaaagtcaag agcttatgaa tttggtgcaa aaagagcttt gttttataaa ggacttgctc
    22801 aaaaacaaat ccttaaagct taaagaactc atgcaacttt ttttcatgca attagatcaa
    22861 ataaagctaa gttatgtggg tggtggaaaa gtcactgtta tgggactttt agaaagcagg
    22921 ggacttagtt ttgatggtgt tgtcatactt gattttaatg aagattttgt tcctaaaaga
    22981 agtattaatg agttgttttt aaacaatgaa gtgcgtaaaa aagcagggct tataagctat
    23041 gaaagaagag agaatttaca aagactttat tatgaaaatt tgatgaaaaa tgctaaaaaa
    23101 cttagcatta gttttgtgga gaatgaagag caaactcgat cgcgtttttt agatgagctt
    23161 gattttaatt tttttgaaga aaaaaccaca ccttctaaag cctatttaaa tgctttaaaa
    23221 ctcgactatc aaggcgtaga gttaaattta aatcctataa aagtacctgt tttaaaacac
    23281 gatattttcg aaaaagaatt atcgtttagt cgtttgaatt tatttttata tcaaaaaaga
    23341 acttattttt atcgctatat tttagaatta cctgaagcta gagccttaag cgatgaaagc
    23401 aaggctaaaa atcaaggaaa ttttatccat aaaatgctcg agctttatta taagaattat
    23461 tctaaaaata attttaacct aaaaattttc aatgatttgt tagagcaaga atatccaaaa
    23521 tacagcatta gcgaacttga gcttgaaatt tttaaattaa aatttataca atttgccgaa
    23581 aatgaaaaag agcattttaa attaggttat aaggtgattg agcaagaaga ggagcatcat
    23641 aaagctttaa atatccaaaa tcatacgatc aggcttaagg gtattgttga tcgtattgat
    23701 aagcttgagg ataaacattt tatcattgat tataaaagtg gaaaagtccc tgaaaaatcc
    23761 tttcagctag ctttttataa ggctttatgc gatgaaaatg cggaagcaaa attttatgat
    23821 ttaaatcaaa tgcaatttgt tgaagaaaag gccaaaagct tggatgagct taaagaatgt
    23881 ctaaaagatt tgcttgagca aagagaagaa gagattgaat ttgaaaacga taaagatgag
    23941 tattgccctt ataaaatcat ctacaaaaag gattttagat gaaatttaag ccttttttag
    24001 ccttagaagc aagcgcagga agcggtaaaa cttttgcctt aagtgtgcgt tttgtggctc
    24061 ttattttaca aggagcaaaa ataaatgaaa ttttagctct aacttttacc aaaaaagcaa
    24121 gcaacgaaat gaaaaaaagg attatcgaaa cttttttaaa tttggaaaaa gaaagtaaaa
    24181 aaagcgagtg taaagagctt tgtgagcttt tagggtgcga agaagacgag ctgatatttt
    24241 taagagataa gaaaaaacaa gagtttttaa gacaagagct taagataagc acatttgatt
    24301 ctttttttag tcgaatttta agagcctttg ctttaaattt gggattaagt agtgattttg
    24361 atacaagtga agaaaagctc gatgttaggg ctgttttttt aaaattactc aaccgccaag
    24421 aattaaaaga tttagcttat tataaggtga gtttagaaga taatcatgat ttttttgaag
    24481 agcttgagaa tttctatgaa aatgcgtatt ttaaagaatg cgtaaggatt cctaatcctt
    24541 caaaagcttc tatcaatcaa gcctatgatg atttaagggt ttattgttta agcttagatc
    24601 atgtcaaagg atataaatat ttatgcacgc attttaaaga tgaagtgctt caattaagcc
    24661 aatttgcaaa gtcagatctt ttgaatttaa caggtgctcc aaaatacttg caagaattag
    24721 aagatagcga tgctaaattc agccaaaaaa gaaaagcatt catcaaagct ttagatgctt
    24781 atgctaaaga gcttgaagaa tataagatcg caaatttaat gaatctttta agccatttta
    24841 gcaaggctaa agatatcatc caaaaagata aaaatacttt aagctttagc gatattagcc
    24901 gaagggtgct agatcttatc agaagtgatt ttaaagatat gatttatttt cgcttggatg
    24961 gctatatttc tcatttatta atcgatgaat ttcaagatac tagcgtggtg cagtatcaaa
    25021 ttttaagacc tttaatcgcc gagcttgttt cgggcgaggg cgtgaagaaa aatagaacct
    25081 ttttttatgt gggcgataaa aaacaaagta tctatcgttt tagaaagggt aaaaaagaac
    25141 tttttgattt gttgcaaact gaatttaaac aaattcaaaa agatcaactc acgatcaatt
    25201 accgctctaa acaaattttg gttgattttg tcaataaaac ctttcaaagc aagattaaag
    25261 actacacccc tcaactttct ttagaaagca aaaaaggtgg ctttgtgcgt gtgatcgagt
    25321 cgcaagaaac aaaggtggat aaagatcaag ctaaagaaat tcaagataaa accctagaag
    25381 ctttgctaga gcagcttaaa tttttaaaaa gtaaaaatat catttatgat gatatttgca
    25441 ttttgtgttg gaaaaataac gatgcggata tgattttgga ttttttacac gagcaagata
    25501 tcccagcctt tactcaaagt aatattttac tcgaaaataa agcctgcata agagtgcttt
    25561 tagaatacgc taaatactgc atttttggcg ataagtttta cttgcatttt ttaaaagaaa
    25621 tgttaggttt tgagcctttg aaattaaagc ttgatttggc aaaaagtgct gtgcaaaatg
    25681 tgctttattt gatcaaagaa ttaaaacttg atcttaatga tatggctttg attcagttta
    25741 tagaatacgc taaaagcaag gatgattttt taaagctttt gtttgagcct tgcactttaa
    25801 aaattatgag tgagcaaaat agaggtataa atatcatgac tgtgcacaaa tccaagggct
    25861 tggaatttga tcatgtgatt ttacttgata gtctttcaaa aaacaatccc aacaataaaa
    25921 ccataatgct tgagtacgat atcgatcaag gttgggagct tcacataaaa gatagctacc
    25981 gaaaagcgac tcaagagagc gaatataaag cttttataga taaaatcaca aaagcagatt
    26041 acgaagatga tatcaataag ctttatgttg cttttacaag ggcaaaaggc aatcttatca
    26101 tcatcaaaag aaatgcctcg tttcaaagtg gaaattatcc aagttattta aacactatgc
    26161 ttgatattga aattcaagaa ttaggcgaga tagaaattca aaccaatgac acccacttac
    26221 ctcaaaaaga aagctttcaa gccttaatgg aatttgaaaa aattcctttg caggatatag
    26281 aaagaaaaga aaatacaagc tcggatgaaa tttattttgg aaatgctttt cactttttta
    26341 tgcagaattt aaagcttcca caaggagaaa attttgacat tctttgtcag aaggtgagtg
    26401 gtaaatttag acatttttta aatcacgatg attttgaaag gctttttaaa aggataaaaa
    26461 atttacttgc taatgcccaa tttcaaaaac tcatcgaaaa taaaaaattg ctcaaagagc
    26521 aagctttgag ttttcaaggt gagattaaac agcttgattt gcttgcttta ggcgaggatg
    26581 aagctatcat tatagactat aaaacgggtt tgaatttcaa caagcataaa gagcaggttt
    26641 tgctttataa agaagctata gagaagattt tggctaagaa atcaactcaa gcttttttag
    26701 tctatgtttt agaagataag gtggagataa tagaggtcta atagtctata tcatcaaata
    26761 taggctctat cacaattttc ccacttttat ctattaaacc gtattttcca tttaacccaa
    26821 cttttgctaa tccttctcta aaataccaag catcatcaaa attaggcttg attacaaatt
    26881 ctccattttt atctataaaa ccgtattttc catttaactt aactcctgcc aatccttctc
    26941 taaagctcca agcgtcatca aatttagact cgattacaat tttcccattt ttatccataa
    27001 aaccgtattt tccatttaac tcaactcttg ccaatccttc actaaaatac ccaacaccat
    27061 caaatttagg ctttgctatg atttttccac ttttatctat aaaaccccat tttccattta
    27121 acttaactcc cgctaatcct tcccaaaagc tccaagcttc atcaaattta ggctcgatta
    27181 caaattctcc atttttatct ataaaacccc attttccatt taactcgact gcttctaatc
    27241 cttcgctaaa gccccaaaca gcattaaatt taggcttgat tgcaaattct ccatttttat
    27301 ctataaaacc ccattttcca tttaacttaa ctcctgccaa tccttcccaa aagctccaag
    27361 cgtcatcaaa tttaggcttg attacaaatt ctccattttt atctataaaa ccccattttc
    27421 catttaactt aactgctgct aatccttcgc caaagctcca aacataatca aatttaggct
    27481 cgattgcaaa ttctccattt ttatctaaga agctccactg tccatcgatt tttaccctta
    27541 ttaaatcacc gcttacaaag ataccagcaa aacaagcttt accatctcca tcatcgcatt
    27601 tttctttata gatagtttgg agcattttac agctacttgc atcatcgtag tggcattttc
    27661 cctcaagttt gtttatataa actctgctgt attttccacc ataaaaatac tgatatatgc
    27721 ttagcgaagc tatcaaaaag aaactcacca tgctaattat gattttgctt ttatgttttg
    27781 agataaattc ttttctttgt ttgagacttt tttctctttc ttcttgagct atttttcttt
    27841 tctcttcttc tagtcttctt aattcttctt gttttcttct ttcttgttct agtttttctt
    27901 ctgcttgcgg atcgtataaa tcactatttc cacactcttt gcagaattta gctatatcta
    27961 aattttttgt attgcaatga ttacaaataa gcattatgca ccccttgttt ctttgatgat
    28021 ttcataggct aaattgatct ttttcatcat ctcttgagct atttttaaaa gttcaggtgg
    28081 aagttctttg gagtggagat tgtcatagtg gtattctttg gctaattttc tataattttt
    28141 cttgatagtt tcaaaatcat ccttaggatg agaatttaaa atttcataag cttgttcgag
    28201 agtgattgta aatttgtctt cttttggttg ttcttgctgt gctttttcat gagtaaaatt
    28261 ataaatttgt tcatatttta gctttacttc tctaaatttt ataaggttta atccaagtcc
    28321 tacgatgata ttttccataa gagcattttc atttgcgctt atttttgcat cataatatat
    28381 caaatcaagc agtaaacata tgagaaaatc gatttctttc tcgtaaaatc ttgcactagt
    28441 gcaaagttca tggatgcttc tgccttgatt tttttcatac tcaaaaatgc ttgcataagt
    28501 atttctaaat ccactgtatt ctttagaata aaacatctct atcttatcga gtaaagaaga
    28561 tataaatttg gataaatctt ttgtgatgat tttatcatct gcttttgcaa cttttgccaa
    28621 aagcgctact atgatagcgg gatttttact gtaaatataa tcaagccttt gtcttgcggg
    28681 atgatttaac ccttttccac aaaatataca aaatttagca tcttcttcag ggtttatctt
    28741 aagacaattt ttacactgaa gatactcttg aattttaaat tttaaagaaa gcaaaataaa
    28801 accttatttt taatataata aaaagtaatt ttaacaagga tatgcttaaa atgtaatatt
    28861 ttatctgtgc tagcgagata aaaataaaaa ggctactaaa ctttaaatat tcttaaatta
    28921 agtattattt aagtaaaaat aattataatc tcatttttaa aaaatttttg gcaaaggtaa
    28981 aaattatgac aaagataaca aagccaaacg aagttaaacg agaatggatt gttttagacg
    29041 cagaaggcaa acgctttggt cgtcttttaa ctgaagtagc aacaatttta agaggtaaaa
    29101 acaaaccttg ctttactcct aatgttgatt gtggtgatta tgtgattatc atcaatgctt
    29161 caaaagctgt atttacaggt gcaaataaag cagaagataa gctttatcac agacattcag
    29221 gatattttgg aagcgtaaaa agcgaaaaat tcggagattt acttgaaaaa aatcctgcaa
    29281 aattatataa attagcagtt agaggtatgc ttcctaaaac aaatttgggt agagcgatgc
    29341 ttaaaaaatt aaaaatttat gcgggtagtg agcacccaca cactgcgcaa attgctaaag
    29401 aaggaaaata atcatggcaa caacatatgc aacaggtaaa agaaaaactg ctatagcaaa
    29461 agtatgggta aaaccaggta gcggtaaaat cagcgttaat ggtatcgatt taaatacttg
    29521 gcttggtgga catgaagcga tcaaacttaa agtagttcag cctttacttg taactaagca
    29581 agaaacttca atggatatca aagcaacgac tttaggtggt ggttatagtg ctcaagcaga
    29641 agctttaaga cacggaattt caagagcttt agcggctatg gatgctgatt ttagagcttt
    29701 attaaaacct aaaggacttc ttactagaga tagcagaact gttgagcgta aaaaatatgg
    29761 acgccgcaaa gcaagaagaa gcccacaatt ctctaaacgt taatctttgg cgggattttc
    29821 ccgcttttta tattttatct ctatttacta tttatttttt ttatatttta tgatataatt
    29881 gaacttcgta ctgcttaagt gaatttatct atgaaaggct tttgatgaga aagttattgc
    29941 tatgtttagg gttggcaagc gttttatttg gtgcagataa caatgtaaaa tttgaaatca
    30001 ctcctacttt gaattacaat tattttgaag gtaatttaga tatggataat cgctatgcac
    30061 cagggattag actagggtat cattttgatg atttttggct tgatcaatta gaactaggtt
    30121 tagaacatta ctcggatgta aaatatacaa attctactct taccaccgat attactagaa
    30181 cttatttgag tgctattaaa ggcattgatt taggtgagaa attttatttt tatggtttag
    30241 ctggtgtggg atatgaggat ttttctaaag gcgcttttga taataaaagt ggaggatttg
    30301 gccattatgg agcaggttta aaatttcgcc ttagtgattc tttagcttta agacttgaaa
    30361 caagagatca aatttctttc catgatgcag atcatagttg ggtttcaact ttgggcatta
    30421 gttttggttt tggtagcaaa aaggaaaaag ctgtggaaga agttgctgat actcgtccag
    30481 ctccacaagc aaaatgtcct gtagaaccaa gagaaggtgc tttgttagat gaaaatggtt
    30541 gcgaaaaaac tatttattta gagggacatt ttgattttga taaagtaaat atcaacccag
    30601 cctttgaaga acaaatcaaa gaaattgctc aaattttaga tgaaaatgta agatatgata
    30661 ctattttaga gggtcatact gataatatag gttctagatc atacaatcaa aaactttcag
    30721 aaagacgcgc taacagcgtt gcaaaagagc ttgaaaaatt cggtgtagat aaaagtcgta
    30781 tccagacagt tggttatggt caagataagc cacgctcgag caatgacact aaagagggta
    30841 gagcagataa tagaagagta gaggctaaat ttattttaaa ttaatgaaaa agactatttt
    30901 atttgactta gatggcactt tgattgattc tactgatgcc atcttaaatt ctttccaagg
    30961 agcttttaaa atccttggat taactccaaa aaataacgaa gagcttaaaa atcttatagg
    31021 ccatccttta gagcatatgt ttaaaattct ttaccatgaa aaagcgcatt tgagtcaaga
    31081 atttgttcta gcttatcgtg aaatttattc acagatttat ttagagcaga ctactctttt
    31141 gcctaaggca aaagaagctt tagaattagc ttttgaaatt gcggacttag gtatagcaac
    31201 aactaagggt ggaaaattta ctcccttgtt gttagagcat ttaggagtga aaaaattctt
    31261 taaaacttta ataacacttg aagatgtaac aaatccaaag cctcatgcag aacccatact
    31321 tttagcctta gaaaaaatgc aaaaaactaa agaaaatgcc tatatgatag gcgatacgat
    31381 cttagatatc caagcagcaa tggcagcaaa tattaccccc ttagctttaa gttgtggtta
    31441 tggagatgaa gatgagttaa aacgctattc tatggtattt ccaagtgcct ataaatcggt
    31501 tttatatata aaaaatgatt aaactaactt caagtttttg ttaaacgcct tttaagagaa
    31561 tttatagtaa attgatagct aaaaaattat aaaaattatc aattaataat aaaaggaagg
    31621 tttctatggg taaaattatg aaaactatgg atggaaatga ggccgctgca tatgctgcat
    31681 acgcctttac tgaagtagcc ggtatttatc ctattacacc cagctctcct atggctgatt
    31741 atactgatat gtgggcagct gcgggtaaaa aaaatctttt tggcgttcca gtaaaaatcg
    31801 ttgaaatgca aagtgaggca ggtgcagcag gtactgtgca tggatcactg caaacaggag
    31861 ctttaaccac aacttataca gcttctcaag gtttattact aaaaattcca aatatgtata
    31921 aaattgcagg gcaattactc ccctgtgtaa tccatgtggc agcgcgttct ttagcagcgc
    31981 aagctttatc tatctttggt gatcatcaag atatttatgc tgcaagacaa attggttttg
    32041 ctatgctttg ttcgcattct gtacaagaaa ctatggattt agctggagtt gcacatttat
    32101 gtgcgattaa aggaagagtg ccatttttgc atttctttga tggttttaga acttcgcatg
    32161 aaattcaaaa agttgaagta atggattatg agcattttga tagattgtta gatcgcaaag
    32221 ctttgcttga atttagaaat agtgctttaa atcctgaaaa ccctaaaaca cgcggtacag
    32281 cacaaaatga tgatatttat tttcaaacaa gagaagtaag caatcgtttt tatgatgctt
    32341 taccagatgt tgtaaatgaa tatatgcgag aaatttcaaa aatcacaggt agagaatata
    32401 agccatttac ttattatgga cacaaagaac ctgaaagaat tgttatagct atgggttctg
    32461 tgactcaaac ccttgaagag gttgttgatc atcttaattc taagggtgaa aaagtaggga
    32521 ttgtaaaggt ttatttatat cgtcctttta gtttaaaata tttctttgat gttatgccaa
    32581 aatctgtgaa aaaaatagct gttttagata gaactaaaga gccaggaagt cttggagagc
    32641 ctttatatct tgatattaaa tcagctttct atggcaaaga aaatgctcct attatcgtag
    32701 gaggaagata tggactttct tctaaagatg ttgatcctgc acaaatgata gcggtatttg
    32761 aaaatcttaa acttgataat ccaaaagatg gttttacagt gggtattatc gatgatgtta
    32821 ctcatacttc tttgcaaaca ggtgaaaaaa tttcactagg agatgaaagc gctatagaat
    32881 gtttatttta tgggctaggt gcagatggta ctgtgggtgc taataaaaat tctattaaaa
    32941 tcatcggaga taaaacagac ttttatgcac aagcgtattt tgcttatgat tctaaaaaat
    33001 cagggggcta tacaagaagc catttaagat tttctaaaaa accaatccgc tcaacctatc
    33061 ttgtttcaac tccacatttc atcgcttgtt cggtagcggc ttatcttgaa atttatgatg
    33121 ttttagcagg aatccgaaaa ggaggaactt tccttttaaa tagtatttgg aatgctgaag
    33181 aaactataag acaacttcca gatgcagtta agaagacttt ggctgaaaaa gaagtgaatt
    33241 tttatattat caatgctaca aaacttgctc gtgatatagg acttggaaat cgcacaaata
    33301 ctattatgca atctgccttt ttcaaacttg caaaaatcat tccttatgaa gatgctcaaa
    33361 aatatatgaa agaattagct tataagtctt atagcaaaaa aggcgatgct attgtagaga
    33421 tgaattacaa agctattgat gtaggagcag atggacttgt aaaagtagaa gttgatccaa
    33481 gttggaaaaa tttagaaatc aaagaaaaag aacaaatcaa tgcttacaag ggtactgaat
    33541 ttgttgaaaa gatcgttaaa cctatgaatg cagcaaaagg agatgaatta cctgtatcta
    33601 ctttcttagg ttatgaagat ggaagctttg agcatggaac gaccgaatac gaaaaacgcg
    33661 gcgttggggt aatggtacca agatggatag aggctaattg tatccaatgt aatcaatgtg
    33721 cttctgtatg tccgcacgcg gttattagac catttttaat caatgatgaa gaaatggcta
    33781 aagctccaag aggagtaaaa gatcacgctt tagaagctaa gggtactaaa ggtgaaaaat
    33841 tgagcttcaa aattcaggtt tctccacttg attgtacggg ctgtgagctt tgtgtgcatg
    33901 agtgtcccac taaggaaaaa tctttggtta tggttcctct tcaagaagaa atggattttg
    33961 gtgagcaaga gaatgcggat tatttattta aagaaattac ttacaaagat gatattttaa
    34021 ataaagaaag caccaaaggg gctcagtttg ctcaaccttt atttgaattc catggagcat
    34081 gtccaggttg tggtgaaact ccttatatta ctttgattac tagattattt ggtgaaagaa
    34141 tgattatcgc taatgctacg ggatgtagtt cgatttatgg aggttcagct ccttctactc
    34201 cttatagaaa aagcgtgaaa aatggacatg gccctgcttg gggaaattca ctttttgaag
    34261 acaatgctga gtttggtttg ggcatgaaaa ttgcaactga aaatacaaga tatcgcattg
    34321 aaaatattat gaatgaaaat atgcaaaaag tacctaatgc tttagcagca ttgtttaaag
    34381 aatggattgc taataaagac aaaggtgcag aatcggtaga aatcaaagat aagatgatac
    34441 ctattttaga gcaaaatact gatattaaag ctgttcagga tattttaaat ttaaaacatt
    34501 ttttaagtaa aaaatctcat tggatttttg gtggtgatgg ctgggcttat gatataggtt
    34561 atggcgggct tgatcatgtt ttagcaagcg gtgaaaatgt aaatatttta gtgcttgata
    34621 cagaagtgta ttctaataca gggggccaaa gttcaaaatc ttcaagaaca ggtgcagttg
    34681 cgcaatttgc cgcagcagga aaacctatac agaaaaaaga tttgggtcag attgctatga
    34741 cttatggtta tatttttgta gcacaagtta attctacggc aaattatagc catttaatca
    34801 aagctattat ggcagctgaa gcttatgatg gtccttcttt gattatatgc tattctcctt
    34861 gtatcgctca tggtatcaag ggtgggcttg gatattcagg cgagcaaggc gaacttgcta
    34921 caaaatgcgg ttattggcct ctttatactt ttgatccaag actagaagaa caaggcaaaa
    34981 atcctttaac tatggtagga aaagagcctg attgggatct ttatgaaagc tttttaatga
    35041 atgaggtgcg ttataattct ttgaaaaaat caaatccaga gcatgcaaaa gaattatttg
    35101 agcgcaataa aaaagatgca caacgccgtt atagacagct taaaagaatt gctatggctg
    35161 attttagcga tgaggttgag agctgataaa gtatttttta agtataacat tgtgcttttg
    35221 cactttgtta tcatatgagg attttgaaga atattttaag attttaaaca ccaagcagaa
    35281 tgtagagctt ggaaatcttc aaaatccatt ctttaatcct acttttgaaa aaatcaaaga
    35341 cataaaaatt attgctatta tgcttgatag agtaaagatt gataataaat ggtataaaaa
    35401 gggtgataag ataggggagg ccgtgattac tgatattact acaaaagaaa ttattttaag
    35461 atatgatact ttggatttta aaatagcgtt taaaaacaat gataagatta atatttatta
    35521 aaattctatt ttttaccaat cttatttatg ccatggaatg ccaaaaacgc ttatttgata
    35581 taaatatcaa tgaagatcta agcatagaag aaagcctaaa agaacttgct agttattgct
    35641 cttttagcgt ggtaattaaa gatacaattg ctaaggaaaa actaaaagcc attcaaagca
    35701 gtatcaatat ccaccaaatg agtttagatg aaatttttaa actttttata gaagaacagg
    35761 atctagctta taaatttgat ggcaagattt taaaaatttc tgctttgcaa actagaattt
    35821 ttaaaatcaa ctatattact tcagttagag aaggacaaag cataaccaag gcttcggtgg
    35881 attctaagcc aaggcaaagt gagtattata gcgcttttga agataatgaa gataatatga
    35941 ttaaaagtat ggaaaaattt gacttttggc aaaatataga aaaagagatt atgattttgc
    36001 ttagctcctc acatgaaaac tatgatataa aagcacctat agtcaatcca aatgctgggc
    36061 ttgttatcgt tactggaacg cattctcagc ttcaacgcgt aaaagcttat ttacaaaagc
    36121 ttgaaagtcg tcttaaaaaa caagttatta tagatgtgag tatacttgct gtaaatctta
    36181 ataaaaatca ttctagtggg atcaattggc aaaatttcaa tataggatta aattctcaaa
    36241 cgagcgataa tacaaattct tttatgcaaa tacaaaatgg tcaaggtttt gttaaaaatt
    36301 tgggtttaag agcgaatttg aattttgatt ccattgtcaa ttttttatct caaagtggaa
    36361 aaaccagtgt tttatctaat cctaaattaa tggctttaaa caatcaacaa gccattattt
    36421 ccataggcga tactgtgaat tatcaagtaa aagaaagctc taaaggtact gaaaatggca
    36481 caactgtaag tgagagttat agtaattatt ctattttcat aggaattttg cttaatattt
    36541 tgcccgaaat ttctgatgat ggaaaaatca tgcttaggat caatccaagt ctaagcgact
    36601 ttaaataccc agaggacaat aaaagacaaa aagaaccccg cactatcgcg cctgatacaa
    36661 ttcaaaaaaa gctttcaagt gtggtgcaag tagaaaataa tcaaacttta attttgggcg
    36721 gacttatctc tcataatcgc tcacaaaatg ataattctgt taatttttta tctaaaattc
    36781 ccattttggg ttctttattt agaagtgaag atgaaaattc caatatcaca gaaattgttt
    36841 ttatcatcac tccaagcata gtagacaata cacatatacc tagtcttagg gagttaggat
    36901 ttaaatacaa tgaataatat aattgctttt agacaagaat gttttgatca aatcaatgcc
    36961 ttattaaaaa ataaagcttt gattttactt tggggtaaaa gcggtagtgg gaaaagtgtt
    37021 ttattgcaaa gacttgcgct atatcataat gaagatttta ccaatgaaat ttttacagat
    37081 gaaaaagatt ttcatcattt tatacaagat aaaaaacgaa aaattatcat actagatgaa
    37141 gtggggatgt atagtcctaa tgtattagaa ctaattcgga tttatagcga tgaaatgagt
    37201 tttgtgctta gctcgcataa aaaaatcaat ctttttgaag aggagtattt taaaagtcgt
    37261 tttagtgcta ttttttggct tcaaaaacct gatataaatg aattaagcaa ttatatcaaa
    37321 atgaaattta atcaagactt tccccaaaaa tctttaaaat ttcttatgaa aatttatcaa
    37381 ggaaatttaa ggtatttaga caagatactt caaagttttt gcgaattaaa cacctattta
    37441 aacaataaaa aaagtcaaga ttatatttta agactaagcg cattagagca gggattttta
    37501 aaatgaatat agaagaaaga gtgcgcgagc ttgaggataa atataaaaga tatttattga
    37561 aaaaatattt taagttttta tttatctttg ccattttgat agcatgcatg cttataagct
    37621 tttttatggt gcaagatttt tacaaacaaa aggccttagc tttagaagct ttagaatata
    37681 aaaaaacact caattggcaa attacacaag cgcaaattgc aaatgaaaaa aataaaattt
    37741 tacaagaaag attatccaaa gatgaaagca aagatgagtt agaagaggag ttgaaaactc
    37801 aaattgatat ttattctaag attttaaata taagtgattt aaaaaggagt ttttaccaaa
    37861 atccaagcta tcaaaaagct atgaatttag ctactcagta ttatgaaaac aaagattatg
    37921 aaaagtctat tttttggtct ttaaaagcca atgacatcga tagaaaaaat tcagactcat
    37981 gggttttatt tgccaaggct aaacaagctt taggaaaaga tgaggaggct aagcaagctt
    38041 tggatactta tgtaagttat tatggcttga ttgaatttga taaggaaata gatgattgag
    38101 cgatttttat ttgaagatta tattaacggt aaaatcaccc ttgagcaaat tgatcgtgag
    38161 cataaaatcg atagtgaaat ttttctaaaa gctttggcta gtgataaaaa tatttcttat
    38221 tctactttag aggaacttga tcttagtttg ggtgaaaaat ttccatgtag ttttcttttt
    38281 aaatttaaaa tcttgcccat tttaagtaaa gaaaatacac ttcatatagc aagctccaaa
    38341 ccttgttctt tagagctttt agatgagatt agaatttttt atgaagttaa gaatatagaa
    38401 gttttgatcg caagcgaatt taagattatg aaatttttat ataaacttca agttagagaa
    38461 aaacttaaaa atttaagcac caatcttaga ttagaatgga aagaaaatag aagtcaagat
    38521 gagcaaagtt gtatcagtca aatttttgat tttatactcg atgaaattct tgaatttaat
    38581 cctagcgata tacatataga agcaagagaa aatgatactt tgataagatt tagagtagat
    38641 ggaattttac gcgaatttgc ttgtcttgaa aaagatattt atgaggcttt ggtttttcat
    38701 attaaatttt tatcgcagct taatgttgca gaatcaagaa aggctcaaga tggaaatttt
    38761 gagcttaaaa tcaaagaaaa tagatatgat tttaggattt catctttgcc tttgcaaaat
    38821 ggcgaaagca ttgtgataag aattttaaaa cacaacgaag aaattttgga tttagaaaat
    38881 ttaaatttgg gcgaaaaaaa tcttacaatt ctaaaaaaag ccctatacaa cccttatgga
    38941 atgattttac taacaggtcc tacaggaagt ggaaaaagta caagtttata tgcttgttta
    39001 aatgagctaa aaagcataga aaagaaaata atttctgtgg aagatcctat agaatataaa
    39061 atgcctttaa ttcagcaaat tttgctaaat ccaaaagcag gacttgaatt taataatgcc
    39121 ctaagagcca ttttaagaca agatcctgat attatcatgg taggagaaat cagagatgag
    39181 gagagccttg atatagcgat taaggcttcc ttaacggggc acttgctttt aagtactttg
    39241 catacaaata atgccatttc taccatagat agattaattg acatgagtgc aaagccttat
    39301 ttgatcgctt ctgctttaag gcttgtcatt gcccagcgtt tagtgcgcaa gctttgtcct
    39361 aaatgcaagc aaaaaagcac taaggtttat gaaataaaag gtgatttttt tgaagctaaa
    39421 ggctgcgagt attgtcatca tagtggatat caaggtagag aactcatcag tgagtgttta
    39481 tatatcgatg aggaaatagc tcaagttatt agagagggtg gttataaaaa taaaattcta
    39541 gagcttgcta aagtaaaggg ttttcaaagt atgtttgagc aaggtttgca aaaagcaaaa
    39601 gagggtataa ctagcataga tgagctttta agggtactta atgaagcttt atgagctcga
    39661 gattaaaggc aaaacaaaac agacaaagca tttaagggct aaaaatttaa acgaagctca
    39721 agcaaaagct atcgctaaaa aatgggaaat tttaaatatc aaagagatac aaaaagcaag
    39781 ttttaaaaga ttagatgatg caagatttat ccttttcttt caagaattat ctttgctttg
    39841 cgaagtagga atcagcataa aagatgcttt aaaggagctt gataaaatat attctcacaa
    39901 gatgattgcc aagctttgcg ataatttaaa tttaggacaa aatttaagcc ttgcttttga
    39961 aaatgcaaat tttggactta ctcatgcgga attagccctt attaaaactt cccaaaacac
    40021 aggaaaatta agtgaaattt tcatgcaaat ttcaagatta agacaaaata atgtagaaaa
    40081 tgaacaaaga gtcaaaaaag ctttaagata tcctttgatt gtttttttaa gtgtgtgcgc
    40141 ggcttttgtt ttactcatgc tttttgttgt gcctaatttt aaagatttat ttgaggattt
    40201 aaatttagcc ttacccttta taaccgagct tataatttat atttataatt ttttggataa
    40261 gtatattttg cttgtgtttt gtttgatcgc acttatttta tttcttactt tatttttgta
    40321 tagaaaatat tatttctttt catatttttg tgatagcttg cttttaaaac tccctttgtt
    40381 gtctaaattt attatttatc agcaaaatta ttcttttttt atgattttct ctttactttt
    40441 aaaaagcggc atttctcttt tggaagcttt taaattagcc actttggcct taaataataa
    40501 aaaggtatta ttgtattatc aagaaattag aacatttatg gattctggcc ttgaaataag
    40561 tcacgccttt aaaaaagtag atctttttga tcctttggtt ttttctatgt tgagtatagc
    40621 tatgaaaagt tctaagcttg agtttttgag cgaggagatt gcgaaatatt ataaaaacaa
    40681 aagtgaaaat ttaatggaca agtttttaag ctttttagaa cctataatga ctttatgggt
    40741 tgcgatttta gtattgtttt tagcacttgg aattttttta cctatatggg aacttagctc
    40801 aggagtaaat ttttaagaaa aataatccca agcaaccttg atgatagtag cacctacgac
    40861 gattaaaaac aaggttttta taaatttgcc attggtttta agtactaatt ttgaaccaag
    40921 ataggcccct aaaatttgtc ctacacccat aagcaaacct actatccata aaagttcata
    40981 tcgccacaaa aagataaaaa gagcaacgac attgctggtg aaatttagaa tttttgtatt
    41041 aatacttgct tttttcatat taaaacccag tagcattacg caagcaaaaa tccaaaatga
    41101 acccgtccca ggccctaaaa aaccatcata aaaacccaaa gttaaaccac aaattaaatg
    41161 aaaaaatttg atatttttta tctttgcttc actctcgtgt ttacccaaac taggacgcaa
    41221 agcagtgtat aaaaaagtca aagttaagaa aatcaaaatg ataagtttta aatgctcatc
    41281 ttttacaaaa agcacgctgt aacttcctat ggctgcgcct aaggctgtga aaaaaatacc
    41341 ataagcaaga tgaggtagag tggttgattt aaaataagtt aaagtcgctg taaaagagcc
    41401 aaagacactt tggagtttat tggttgccaa agaaagatgt gcaggaattc cacaggctat
    41461 aagcgcagga agtgtgataa gcccacctcc acccacaata gaatcaataa atcctgcaaa
    41521 aagagctaca aaaaacaata caaaataata aatcgtatct agatgttcaa agcccatttt
    41581 tactccttta gtttgctaag ttctttattt tgccccaaac gataaagcgc aaagtcatat
    41641 tttataggat catttgcatc caatcttttt aaattatgcg tgagttctaa aacgctttta
    41701 tagtcgtata ttttacgctt tagaagacct aaagtcaagg aaattttatg tgtatgtgta
    41761 tcaagaggga ttaaaagatc tttggtgtga attttggtaa aaagtccaag atcaagctca
    41821 tcttttctaa ccatccatct tagatacata ttataacgct taagaggtga agtaggggta
    41881 ttttgccaaa ttttaccaaa gaaaaaatca taaccataac tcgaatacga atttaaagtc
    41941 ttgatttttt gcaaaaaagc taggattgca tcggtagtat tttctctttt ttgataggct
    42001 gtactaaaaa gttcatggag tgaaatttca tttttaagcc ttgcaaaagt gagaaaaatt
    42061 tcttgtatat ccttttcatt ttgaaagcga tattttaaat ttttaagttc tttttgaatt
    42121 tgtttttggc ttaaatcaag caaagaaaaa tcaagttttt ttaaaaaatt gactatattt
    42181 ttagcattcc cataagcaaa taaagcacaa agtaaagcga taaattcatc attatgaaat
    42241 ttagcaactt gcaaaggatc aggactttca aaaagagctt tgttggtatt tttttcttcg
    42301 accaaagaat caagtttgtt tttaagtgga gtaaaatttt tcactagata ccgctagagc
    42361 ttaggattta agccctaata aggtatctag catttgatct actgtggtta cgatttttgc
    42421 tgcagcacca tagcttgatt gccattgtat gagagcggct aattcttcgt tggtatttac
    42481 cccgctttta gattgatatt cgctataaac ggagttataa agcgtttgat tactcgcatt
    42541 tacaacatta ttgttttcac catcagagcc tattttaccc gtaagcttgc ggtaatactc
    42601 ttccatagta agattatcaa ttgttccatc ttcattgtaa aaattcactt tatcatattg
    42661 aagttgtatg attttatttg ccatatcatt tccactatca acaccgttta agcttgctct
    42721 tactgtgctt ggatcattta agatagaatc ttttactttc atatcacttg cattagttcc
    42781 gctaaaaaat cctcctatgc taaatgcacc ggcaaaattg gttcccttat cttctatggc
    42841 tactttaaag cctgattttg cattgatttg aaataaacta tcccctgttt ttgcatcgta
    42901 gctaaaactt gcattgatat gatcatcaac atcatcgttt gaatttttat tgtcattatc
    42961 atctgtattg gcattgattt gacgcatgat atcattcatg gttgtattta catctatggt
    43021 gatggttttg gtgagttttt tatcgccttt atcatcataa atgactatat caaaacttcc
    43081 tggttgtatg gttctgtcgt aattaactaa aggaatatct cccttaagtc cagatagata
    43141 atcagaagta acagaacttt tcgcagaact cgcataaaga ttgttagttt cattgatcat
    43201 ggtcttagca aaagtatcta aagaatccat ataaccttgg ataattccat cttcatattt
    43261 tcctttgctt ttgctatagt ttctaccgcg taagtcaagt tgagcaccaa gctgtccacc
    43321 gttaatcttt gcagtaagat cgcgaacttt ttcatcagga gtttcataat aaatgctata
    43381 agatttattt ttatcatcat aattaagctt taaaggatga aaatttatcc catctactat
    43441 actaaaacct tctatactta gattgtattg atgtcctgga tcagtgatgg ttgtatcaag
    43501 gcgattgtct tgattgattt catttttgct tgcaactgca ctaactagct ttgaaagggt
    43561 aagttcaagt tcatctcttc tatccctaag ctcatttgcg tgttctgttg gtaaggcttc
    43621 ttgtccataa atttgtttat ttatagtagc aatttcttca ccgattctat taatctcatc
    43681 aaccgtattt ttaatatcat catttacttt tttttggatt ttatccaagg ttgcaaaagt
    43741 gttattaacg ctttctgtta aggtttgaga agcttttaca agggctattt ttgtggcatt
    43801 ttcattgggg ttagatgcaa aatcattcca agctttgtta taattttcta aatctttcaa
    43861 aattccagta ttttgtaagt ctggaaaacg ctgagcgatt tcttgtaagg ttgaagccat
    43921 atatttagtg tattctagtt ggtttgatgc accttttaat ttatagtaag aatactcatc
    43981 atgcaaacgc actatacttt ctatagcagt tcctgtgcct acttgaactc cacctgtggt
    44041 aatataccca tttgtagttt gcactactct ttggcgtgta taaaaagttg cattagcatt
    44101 tgagatattg tttccagttg ttgcgatttg aacttcgctt gcctttaagc ctgtaacacc
    44161 tgtgtataat gttccaaaaa tacccattat aaatccttat acattgatct tgaaaattga
    44221 ctctggattt gtctttttat ctccataagc attatttgtt ccatcattga tatcaaacat
    44281 tttatttact aagctatcaa gaaaatcttt gacaataaga acaaatttag catactcttt
    44341 gtttttacta tgaaggtttt gaagattttt tttaagtaga tctagttttt gtttatcttc
    44401 atcatctaag agttcactaa gcccttttgt agagctatta tttagctcaa ccaaggcaac
    44461 atcaagttgt tttttagctg taataaattc ggcgataagt ttgttttttt cttctacact
    44521 tggcgttaca ctctcatgtt tagccacttt gatattttct atatcttctt gtgttaattc
    44581 tatgagtttt gctaagatag catttacttc atcaagtctt tgtttaagca tttcattctc
    44641 ctttttaact caaaaaaagg agaatgaaat caaattaaag aatccgctat tgcttgagct
    44701 gtagcttttg tgtctatttt atagctacca tttttaattt gctctgcgat tcttgcagct
    44761 ttatcattct ctgttttttg agtgtcgttt gttttagttt ctttatctat tctatttgta
    44821 tttaatgtgg tatttgccac ataactttgt tgtataggat tgatcatttc tgcctccttg
    44881 atcttagtta taatcctcta caaaccatat cgacctaaat ttaaaaaact taaccccttt
    44941 cttttaaaaa atcgtataat aattttgaaa aacccatacc tccacttaaa gctttactca
    45001 tggtatcgtt atacatggaa gagtatattt catcgctggc atcttttcca aagagtgaat
    45061 tttgactttt taaagatacg tctaaaactt gctttaaaaa aaatgcttca aaagcatccg
    45121 tttgttcttt taaggcttca tcttctttgc tctttgtaac tatatcattg tcatttattt
    45181 tgatgcttga ttctaaactt cttgctttgg ctgcacgatc aagtaaagca ctattcatat
    45241 tataagtatt taaaaaatta tccattttca ttagatgatc tccaaatccg cgttaattgc
    45301 acctgcgcgc tttaaatttt ccataatagc gataatgtca tttggggttg ctccaagctt
    45361 gttcagcatt ctagctatat ttgcaactgt gctttttgca ttgttgattc ttaaggtatt
    45421 tgaacttgga tctacaaaac caccatcttt catatcgatc tcattttgag ctgctgctgc
    45481 attattgttt ggatcaattt ttatggtaat atctttatgg gtgattaaaa caggctcaac
    45541 ctcaatatcc actcctgcaa tcactgttcc tgttctttca tcgatgataa ctttgctttg
    45601 tggtttataa gctatatctt gttctaaaac tcttgccata aaatcaacat ttgaaagatc
    45661 ttcaggtttt ttgagtttta ctgtgcgaga gtcgatggct ttagccactt cttcgccaaa
    45721 aacggtattt aaaactcttt ctatatcatt tgcggtttta aagtccgcta cttttaagct
    45781 taaggttaga tcattatttt ggctaaaatt ttgtggaatt tctctttcta cattagcacc
    45841 acccatcaca gtagcagcag tagagtgaga gcctgctcct cctggtctag cagttaatcc
    45901 tcctgttgag atagaacctt gtgcaatagc ataaatttcc ccatcgattc cacgaagtgc
    45961 ggtaagcaag agtgttccac cttgcaaaga ttttgcatcg cccatagatg aaactgtgat
    46021 atcgagctta tctccacttt ttgcaaaggc tggaagttta gctgttacca taactgctgc
    46081 tgtgtttttt gatttgatat cgttaggatc tactttgata ttcataccct gcaaaagatt
    46141 ggatatggat tgtagtgtaa atttcgagct tgttccatct ccgctaccat ttaatcctac
    46201 aacaagacca taacctatga gctgattatc tcttacgcct acggtattgg ctatatcttt
    46261 tatttgtgtt gcaaaaacac ttgtcatcaa aagtaaaaaa aatgttaaaa ccctcatcga
    46321 ttcttccttt aatctgatag ttagaataaa agaagcaata agtgttccaa gattaaaatt
    46381 tattcttcta gaatattttt ttgataaaaa ctaagactag ttgatccgaa ttttttttct
    46441 tttattttgg taaaatttgc tatattatca ggagttttga ttttagaatt atgttctaaa
    46501 acgatataaa ataaagcatc taattttaat ttttctaaaa aattataaat tttttcataa
    46561 attccactaa aaccctccct tatatcaaaa ggcggatcaa gatataaaat gatatcttct
    46621 ttagaatctt ctataagttt aggcagtatt tcaaaagtat tagcatgaat tacttttaag
    46681 tttgtatcta tatttttagc attttctaaa gcgattttat aagcgtttaa atcaagttct
    46741 atagcataag ctttaagagc gtaattgctt aaagcttcag cagccattaa agcacttcct
    46801 ccaaaagctt cgataaaaat tttatttctt aaatctgatc ttaagacatc aaaaacacat
    46861 ttttttacga tacttttagt gcttcttgtg gtttgaagac taggcaaaag cagtttttta
    46921 cccttatata tgccactttc tatgcttgta tataatttag gcaaggtttt tttggttttt
    46981 tcttttttat tgggctgggt agagtcgtta aaatggatat ttttcttacc ttgtaaaaaa
    47041 tccttaacgc ttataaattt attattcata cattaaagct ttaaccagtt tatctttaag
    47101 ctcgctgata gcaagatcta tcttgctttg atagtctctt ttaaattcac ttgcgatttc
    47161 atctatcctt gcttctagca ctcttcttct ttcatcggct agtttttgag ctgttgcttt
    47221 tagcgcgcta tcgaattcat ttaaggaatt catgagagct tctttgctaa aaggcaaact
    47281 taaaaagggt gaatttttag cgatgataaa taaaggcttt tgagtagaga ttttttcatc
    47341 gcttatgata aaatcgcagt cctttttcat cactaaatgc tcttttaaaa aaagctctaa
    47401 ggctttttcg atgatcaaat ctttacattc taaagaaatt ttcatatcaa acttactttc
    47461 aagtcatgat tttgcaaaga aggattttta atgccttgga ttaaagaaag gaattcaaaa
    47521 taacttaaaa cataaaaatc cttaaattct cttccactac tttgcataag ttttttcgag
    47581 caagtatcaa acatataaaa atcttttgct tgatttacca ccataaaatc agcaccacta
    47641 tcgtaagcat caaggatgat atttgctgcc attttatagc taagttcagg gtttagttga
    47701 agtagtgaaa atccattgtt tttatcgcta ttttcataag agataaaatg ggctttgatt
    47761 tttgatttta tatcatcttt gattttaaaa ccataacaag cgatattaaa attatcaaaa
    47821 tcatatttta cttcaccaag ctctttgatt tcattatcaa aagcattgat ttttggtaaa
    47881 tcaaattcta aagcagcctc attgataagt tttaaatcta tgatttcttt ttgtaaattt
    47941 ttgatagtat tttccaaatc ttcattttta cttgtaagat gataaaagat gcctttttgc
    48001 gtatcgcaaa ttgtctttaa aatttttatt tttttatcag gatatttttc tatcattttt
    48061 gaagtcagat aaaacactgc atcgcccata tattcaggta aaaagtctaa aatttcgctt
    48121 gaataataca aataatcata tttttcataa agctttttat cttcctcatt tgcaaatgga
    48181 gcaaggtatt taaatttttc taaaaaatca tctttgttga taatgaggtc ttttactgat
    48241 cttttggtgc ttagtggctc tatgatgaga ttaaaatcgt attttttcac caagatatct
    48301 aaaggtgtat ttaatggtaa aaattcttta ttgactacga tatagctttt atcatttttt
    48361 tcaaaatcaa aataaatatc atcatcttgc acttgcaaaa gcaagtcata aagagtagca
    48421 aaattttcat aattatcata aacatagggt ttataataag cctcataatc tttttgttta
    48481 tcaaatctaa aaattctaag ttctaaattt ttcatgcttt ttccttttga taagtattat
    48541 ataaaatttt tttaaaattc actagaattt aaaaggaaat tttataaaat cttttcatga
    48601 ataaggaaga ttttataatc aaagcttttt taaatgaaaa aaacggcgat gatggagcta
    48661 ttattgatga ttggtgtttt agtaaggatt tgttttttga aaatgtacat tttaaaagag
    48721 agtggtttag cttagagcaa attgctacaa aagcaatgct tgtaaatatt tcagacgcta
    48781 ttgtgatgaa tgctaagcca aaatacgcac ttttagggct tgctttgcca aatagcctag
    48841 gtgaagatga gattaaggcc ttgcaaaaag gttttttaaa aacggctaaa aaatttaata
    48901 tcaaaattat aggcggtgat acgattagta atgataagat tgatattagc attactatca
    48961 tttctaaagt gagaaataag gctattttta gaaaaggact aaaaaaagga catttgcttg
    49021 cttatacagg ggttttgggt aaaagtttaa gagggcttga aattttgcaa aatggcggca
    49081 ctttaaattc aaatcatgta tttataaagc caaaattaag gcctgatttt ttttatgaaa
    49141 tcgccccttt tatatcttgt gctatggata tttcagatgg tttgagtaaa gacttatcaa
    49201 gacttttggc acaaaataaa tgcggcattt cttggtttaa aaaacttgat gattatgcgc
    49261 tttatagcgg agaagaatat gaaattttgt ttgcttttga tgaaaaagaa cggcaaaata
    49321 tagaaacaat agccaaaaaa cacggcgtga aattaaatat ctttggaaaa gcggtgaaag
    49381 gaaaatatga atttagagga agagaacacc atttttaagc ctttgtatag tttaaaacac
    49441 agtcctatta atgcgtattt tagtaaaaat agcgatgatt ttgtagtgcg tgaaaggcct
    49501 ttgtatgaat ttagcggtaa gggtgaacat cttattttgc atatcaataa aaaagattta
    49561 accacaaatg aagctttaaa aattttaagc gaattaagcg gggttaaaat aagagatttt
    49621 ggttatgcag ggcttaaaga taagcaagga tcaacctttc aatacctttc tatgcctaaa
    49681 aaatttgaga gttttttgtc aaatttttct catcctaagc ttaaaatttt agaaactttt
    49741 attcacgaaa ataaattaag aataggccat ttaaaaggaa attctttttt tatacgctta
    49801 aaaaaagtaa tgccaagcga tgctttaaaa ctagaacaag ctttgatgaa tttggataag
    49861 caaggttttg caaattattt tggttatcaa cgttttggaa aatttgggga taattataaa
    49921 gaagggcttg aaattttacg tggtaaaaag atgaaaaatg tcaaaatgaa ggagttttta
    49981 atctctgctt ttcaaagcga gctttttaat cgttatttga gtaaaagagt ggagttatca
    50041 cattttgcaa atgattttag cgaaaaagaa ttgatccaaa tttataaaat ttctaaagaa
    50101 gaagctaagg aacttaaaaa acaagaacaa ttttttaagc ttttaaaagg tgaggtttta
    50161 gggcattatc cttttggaaa gtgtttttta tgcgaggatt taagtgctga gcttaggcgt
    50221 tttaaggcaa gagatataag cgccatgggg cttttaatcg gtgctaaggc ttatgaaaca
    50281 ggagaaggtt tggccttaaa tttagaaaat gaaattttta aagatacttt ggagtttaag
    50341 gctaaaatgc aaggttcaag acgctttatg tggggatatt tagaagagtt aaaatggcgt
    50401 tatgatgaag aaaaagctca tttttgcatg gagtttttct tgcaaaaagg ctcttatgct
    50461 actgtggttt tagaagaaat tttgcataaa aatttgtttg agtgaaataa ttatgagtta
    50521 aatttttacg tgatttttac tttagaattt attgcaaaaa tgatatttaa attttaaatt
    50581 taggtatagt tatattaatt taattttaaa actaggagca aaaataatga aaaagatttt
    50641 aacaagtgct ttggctttag gagctatgac tttgattgta gattgtggcg gtgatgatcg
    50701 ttttgtggaa aatttaataa aaacgaatta aattcttttg tggaaaaagg ttttgagtta
    50761 attaaagcaa aaaacaataa tgctaatatg gatttttatt ctccagaaac tttaaaaaat
    50821 ttcgatgaaa aaagatacaa atatttaaaa tcaaaagact tccgacttta tggcagtgtt
    50881 aaaggttatc aatatatgat atttagtgtc aataaagata agagcgataa aagggaattt
    50941 tgggctttaa tttgcgaaga tagcaaagtg gaaaattgca aaatagaaaa tgctacaggg
    51001 cgtggagttt aaaataaaac aagcgggaaa atcccgctat ctttctaatt cttttttata
    51061 ccgacatttt gcggaaatta cttattttta aagcctgtta ctctgctttt aaagcaatca
    51121 aaacgccttc tatcattttt ttgatatctc catcaaggat attatccact tgagaaaaag
    51181 cttctccact gcgattgtct ttaacttgct gataagggaa aagcacataa gagcggattt
    51241 gatgccccca gcctatctca cttttttcac ctgcattagc actatcttgt tgtttcatga
    51301 gttcaagctc ataaaggcgg gattttagca ttttaaaagc ggtggctttg tttttgtgtt
    51361 ggcttctatc gttttgacat tgtacgacta taccggttgg aaaatgcgtg attctcacgg
    51421 ctgattctgt tttattgaca tgttgtccgc ctgcaccact tgctctgtaa taatctattc
    51481 ttatatcttt ttcttcgatt tcaatttcta tatcatcatc aagttcagga cttaccataa
    51541 cacttgaaaa gcttgtatgg cggcgtcctg cactatcaaa aggagaagtt cttaccaaac
    51601 gatggatacc attttcagcc tttaaataac cataagcatt ttcgccttta actaaaaagc
    51661 tcacatcttt aagccctgct tcttcgcctt cttgaaagtc tagagtttcg actttaaaac
    51721 cttctctttc gcaaaatctt aaatacattc tataaagtat gcttgcccag tcattacttt
    51781 ctgttccgcc cgcacctgga tgaatggaaa caatggcatt tttaccatca ttttctccgc
    51841 ttaaaagcat ggaaatttca agacttgtga tggtatcttc aagttttggc gcatcattaa
    51901 ataaagcttc aagcgtttct gtatcgtttt cgctgttggc tagatcgaaa agttcgcttg
    51961 cgtcatttag agcattgaaa gcattttcgt agttttttag tagattggta atcttggttt
    52021 tttctttgcc tatgattcct gcttgcttga catcattcca aaaagaagga gaattttcaa
    52081 gctcttcgat ctctttaagc cttgtttgga tgttttcagg cttgatgata gaggctatgt
    52141 tgccgacttt gttttttaaa gtttttaaaa gttcgctaaa ttcgtaatta tccataaaat
    52201 ttctttgcta taattatatt tttaaaatca aagattatat caaaataaaa ctttaatata
    52261 ggaaaaaaat gtcaaaactt tatcttatgt ctttaggctg taataaaaat ttagtcgata
    52321 gtgagattat gctagggcgt cttagcgctt atgagctttg cgatgagcca agcaaagctg
    52381 atgttttaat tgtaaatacc tgtggcttta tagatagtgc aaaaaaagaa agcatcaatg
    52441 cgattttaga tttacatgag caaagaaaaa aagattcgct tttggttgtg acaggttgtt
    52501 tgatgcagcg ttaccgtgaa gagcttatga aagaacttcc tgaagttgat ctttttactg
    52561 gtgtgggtga ttatgaaaga atcgatgaaa tgatacttaa aaaaaccaat ttattttcaa
    52621 attcgactta tttacagagt gaaaattcca aacgcatcat cacaggttct aattcgcatg
    52681 cttttataaa aattgctgaa ggttgtaatc aaaaatgttc tttttgcgca attccaagtt
    52741 ttaagggtaa gttaaaatcg cgtgaaattt ctagtattat agccgagctt aaggacttgg
    52801 tggctagggg ttataaggat ttttctttta tcgcacaaga tacgagttct tatttgtttg
    52861 ataagggtga aaaagatggg cttatacgct taatcgatga ggtggaaaaa atcaaaggca
    52921 taagagcggc tagaatttta tatctttatc ctacgagtgc gagtgaagct ttgatcaaac
    52981 gcattatagc ttctgaaatt tttgtaaatt attttgatat gcctttacaa cacataagtg
    53041 ataatatgct taaaatcatg aagcgtgggg caaatagcac aagacttaaa gaaatgctaa
    53101 atttaatgaa aagtgtgcca aatagttttt tacgcacggg ctttatcgta gggcatccag
    53161 gtgaaagtga ggcggatttt gaagagcttt gtgcgtttgt taaagacttt ggttttgata
    53221 ggataagcgt ttttgcgtat tctaaggaag aagatacagc cgcttttgat atggagcaag
    53281 tgtcttttaa agtgatcaat aaaaggctta aaatcataga aaaaattgtt gatgaagtga
    53341 tagaaaaaag ttttgaaaaa gaagtagggc aaaagcgttt agtagtttgc acaggagaaa
    53401 gtagtgaggg agagtttttt atcgcagcta aagatttaag atgggataga gagattgatg
    53461 gagaaattct tatcaatgaa agcgaatgtg gaaatttaga aatggggcaa atttatgaat
    53521 gtgaaatttt acaaaacctt gataaaaagc tccttgctaa ggctttaaga aaagtagatg
    53581 caaattaaag atgaaatttt agccctttta aaaaagggta aaaatttact cgctttttct
    53641 tatggaagtg attctagtgc gcttttttat cttttaatgc aagaaaagat cgactttgat
    53701 cttgtgatga taaattacaa aacaagaaaa aatagtgatt tagaagagtt aaaagccaaa
    53761 gaacttgctt taagatttca taaaaaaatt ttcataaaac acgctcctaa atttcaaagt
    53821 aattttgaaa aaaaagccag agattttcgc tatgattttt ttgaaaaaat ttgtcttgag
    53881 caagattatg atcatcttat cttagcccat catttaaacg atcaatttga atggtttttg
    53941 atgcaacttt cacgaggagc aggtttggct gaaattttag gtatgcaaga gtgtgaaaaa
    54001 cgccaaaatt atacactttt acgcccttta ctctttataa gtaaagatga aatttcatct
    54061 tttttaaaag aaaaagatat tttttatttc catgatgaaa gtaatgaaaa tgaaaaatat
    54121 tttagaaatt atataagaaa aaaattctct aatgcctttg tgagtaaatt tcatcagggt
    54181 ttaaaaagaa gtttttctta tcttgatgaa gataggaaaa aactttatga ttttgaaaat
    54241 atcaaagaaa ttcaaggact tcttatttgc cctaaaaatg aaagcttgat cgctagagcg
    54301 gtgaaaatga aaggtttact tttaagcaca gcgcaaagaa aagagttttt aaagggtgat
    54361 tgtgttttag gtggtaaaat agcacttgta tataaaaacg aacaagctat tgtttttgaa
    54421 tatgaaactt gtcaaaaatt acctaaaaat tttaaagaag agtgtagaat agctaaaatt
    54481 ccaagacttt taagagctta tttatacaat cataaaatcg atatttcaag ccttagcttt
    54541 tagttttaaa attttttgat aggctaaatg tgtgagaaaa atcacaaaaa acacttgcaa
    54601 aaaaagtcct aaaagtggca ctgatgagag tagataaaaa caaagagtgc taaatttaaa
    54661 ctctaaaggc gaaaaatcag aatgaaagct tttaaaactt tctttgtcta aaatcgtgct
    54721 tgtaatatca atcattaaaa gtttgtgaaa gagataataa aaggcaagat aatatacaaa
    54781 aatattgata aaaggtaaaa ataaagccaa ggtgcaaagt aaaaaaatcc ctataaattt
    54841 tataaatatt ttaaaaattt caaagatagt ttttagggtt gaaacttcgt ttgtattatc
    54901 ataatggtaa tatttttggt tgatttcttt agcaataaaa ggggtaagaa aagaagtgat
    54961 aaaaagggct aaaaaaaccg aagcaaaaac aacaataaaa cctgaaaata aaaagcttat
    55021 gatggtgatt aaaatttgca caaaatgaag ggcataaaac cacgcccaaa acgaatcctc
    55081 tccaacgcta aataaagaat taaaataatt aagcaaagcc gaaaagccaa aaactgccaa
    55141 aaataccatc aagataaaac taaaaacaag cggaattaag gcaaatttta aaaattgaag
    55201 tgtgaaaaaa tccttaatcg caagtcttaa aattctcaat ttatgccttt ttgtagcatt
    55261 cttctagttt tttataaata gcatcaaaat caagctcttg ttctaaaatt tgagctaaaa
    55321 cttcattgtc ttctttgcca ttccaagttt ttttatagct accatctttg taaccattgt
    55381 tttgtctaaa aatatttaaa acatttttac ctatgtaggt tttataaaga atttcaagat
    55441 taagcccgca tttgatagct aggataaaat aattagaaag tagctctcca aggctaaatc
    55501 caaagccact gcatttatga atgataagtt ctatgtcatt taaaatgcta taaagatcat
    55561 tttcgctagg attgccctct tctttgcaaa aatcttgaaa aacactaaca cagatgattt
    55621 cattcgctat ggcttggaaa tttttatcct ttttatttgt atattcttca agtaaaagac
    55681 tgaggataaa atgccaaata tctacgattt ccatacgaac attttcccaa ttagtagggc
    55741 ttgaaatatt tttccaatgt ttccaagcaa aagaatctat aagttcggca cattccatat
    55801 aaatacaacg tctccagctg atgagctttc cttccttggt ataaccttct tcccaattta
    55861 aaccattagt ttcatcattg agtttttgtt ggagcttgag catattttct aaaatttcaa
    55921 catttttcat cttgtgcctt ttttaatttt ttatgattta ttataaaatt taagcgtaaa
    55981 gatttaaacc tttttctgca ttattttgat tttctttagc tttttcttgc tgtttttcaa
    56041 gctgcttttt catttgctct aacacttcat ctagtagttt tttgctatct tcgagcatgg
    56101 atgtattgat atctttatca ttgctttgat tttgtttgag taaatcacta agtttatttg
    56161 taaaattatt catgatagca ttttgatggt ttttatcatt tggcgttggc aatacatttg
    56221 ccatttgcat tgctgattct atgatttctt ttggttttaa ttctcctact ttagaatttg
    56281 ccaaaaagtc ttttatcatg ggttcgactt ctttcattgc attttttatc tcatcaagat
    56341 cagcttgggt gagtttagag ccttcaaaag tgaagctaaa accatattgg cgtttaagat
    56401 taagactttt accttcttca tcattgctat aacttaagct ttgattgtca tacatagaca
    56461 aggctaggtg tttgccactt tttgttgtat agtccattga aaaactttga tttttgctcg
    56521 catcaatttg cattttactc tccttgtgtt gatatgctta aaatgaaaaa tcggttattt
    56581 tttaaaaaaa tttagtataa ttttacccaa tggatgaaag aattttagaa tttataaaaa
    56641 atgagcagct tttatcttgg gctatgagtg atgaaaaagg tgtttatata gccaatgctt
    56701 tttatgtctt tgatgaaaaa aatttagctt ttatcatcgc ctcacatgaa gatacgaagc
    56761 atataaaatt agctagtaaa aatcctagca tagcactaaa tatagctaaa gaaagcaaga
    56821 tagctttttt aaaaggtatc caagctaagg ccaaatttaa aagcgcaagc aaggagcaaa
    56881 taaaaattta tttttcaaaa tttccttttg caaaattgga taagagtgca aaaatttatg
    56941 ctttagaact tgattggctg aaatttacaa acaatgcttt aggatttggc aaaaagcttg
    57001 aattttataa agataaaatt ttatgat
//
LOCUS       DAQUWA010000002        52423 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.002, whole genome shotgun sequence.
ACCESSION   DAQUWA010000002 DAQUWA010000000
VERSION     DAQUWA010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 52423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 52423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..52423
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.002"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            91..1215
                     /gene="dnaJ"
                     /locus_tag="R8X70_000061"
     CDS             91..1215
                     /gene="dnaJ"
                     /locus_tag="R8X70_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEF2927883.1"
                     /translation="MELSYYEILEITQSADKDTIKKAYRKMALKYHPDRNQGDKEAED
                     KFKLVNEAYEVLSNEEKRAIYDRYGKDALKSGGFGSGGAGFGGFEDLGDIFSSIFGGG
                     FGGASQRRKKSSDEKFQAELVVNLKLSFKEAVFGCKKNIDFTYKSSCKTCSGTGAKDG
                     KLQTCPKCKGRGQVGISQGFITFAQTCPDCKGSGESASEKCKDCKGRGYEELKDSVEV
                     NIPEGIDNGMNLRVAAKGNLSKSGDRGDLYVKVIVEEDDTFIRDDEDIYIEFPVFFTQ
                     AILGQSIKVPTIRGEATLNLPKGAKDGQRFVLEREGVKDVHSSRIGNQIVQIAIKFPN
                     SLNDEQKELLEKLSESFGIKDGMHHEQKGLFEKITHWFKS"
     gene            complement(1355..2605)
                     /locus_tag="R8X70_000062"
     CDS             complement(1355..2605)
                     /locus_tag="R8X70_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HEF2927884.1"
                     /translation="MKLVKLSLVAALAAGAFSVANATPLEEAIKDIDVSGVLRYRYET
                     SNEWSDINGVAQNEGSGISGKQDHKYRAQLNFSGAIADNFKAFVQLDYNAKDGGYGAN
                     NSSTTRSYTADNSSTLNVRQLYLTYTDENVATSVILGKQQLNTIWTDNAIDGLVGTGV
                     KVVNNSIDGLTLAAFAVDSYNSDEQGGDLGTVLNFNENLYGAAAIGSYEVFNGQLNPQ
                     LWLAYMTDNAFFYAVDAAYNTTIFDGVNWTLEGAYLGNSLDNERKDLRNGNGNFFALN
                     GSIEVNGWDATLGGLYYGKKDKATVTVIEDQGNLGSLLAGEEIFYTKGSKLNGDTGRN
                     IFGFVKAGYTFNETVRVGADFVYGGTKTENHSGGDKLEAVARVDYKYSPKLNFSAFYS
                     YVNVDKDTDSTHHDAVRLQALYKF"
     gene            complement(2887..4230)
                     /locus_tag="R8X70_000063"
     CDS             complement(2887..4230)
                     /locus_tag="R8X70_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEF2927885.1"
                     /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCVAMILIGIPVILAENVIGRKSMTNSVDAFKGKWKFVGYMGLLGSFGIMAYYMVLGG
                     WVFVYIFELIIGNFNLSHTITKDFTEYFFNEKISFNPLGVGIFTTLFVLINYIILRRG
                     IIDGIEKSVKFLMPLLFICLILVVGRNLSLEGAINGVKFYLTPDFDKILSPKLLIDVL
                     GQVFFALSLGFGVMITLSSHLSKNENMTKTAIYTGVLNTLIAVLAGFMIFPALFAAGL
                     EPDKGPSLVFQTLPIAFSHIHFGTIICILFFILLLIAALTTSLPIYQVIISVLEEKFK
                     LSKKTAINLTLGSIFILGNIPCILTYGPWRDITLIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWVLGKEQSIKELSNEGKLKSMGFKIWFYYIKFIIPLIIFAIFIYGIAN"
     gene            complement(4281..4949)
                     /locus_tag="R8X70_000064"
     CDS             complement(4281..4949)
                     /locus_tag="R8X70_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEF2927886.1"
                     /translation="MKLKSLQIGHIKDYKGFKSAFIKDLYLEEVDINALGILNDNIAD
                     TKHHGGKNKALFANSYHNYALWENFLGKKLACGMMGENLTLENLHEQNVCIGDIHRFE
                     NAILQVSEPRKPCVKISKVHQNPNFTQEIFKTGLSGWYYRVLEGKKIHAHSKIELIEK
                     NPINLSVLELNHLFYNPHQALKQNPSLLEKLSKLDTLISQNWHETIQKRLKNTYNLDY
                     MQNL"
     gene            complement(4946..6646)
                     /locus_tag="R8X70_000065"
     CDS             complement(4946..6646)
                     /locus_tag="R8X70_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEF2927887.1"
                     /translation="MRFIFTLLFTCYFLFASVLSLNEAFEVKSSSYDSAVSIDIKLGK
                     DIYLYSNQLKLYLNQNDISSLINLPPSTQRLNEKVYYQDLNLALPNLLLERFAQNQNN
                     QIKLQFQGCSEQGLCYNPQTWYFDLKHKDNKFEISAPYKEKQKTLSAKSEESMIANFL
                     ATDNLFWILLSFLGYGLLLSLTPCILPMIPILSSLIVAKSETKFSKKHSFFLSFIYVF
                     FMSLAYAIAGVIASFLGASVQGLLQKPSVLIFFALIFVLLALAMFESFRFELPLKFQN
                     FLHKKSEKGKGVLGIAIMGFLSALIVGPCVAAPLTGALIYIANTGDALLGASALFIMS
                     FGMGIPLLFIGLGLGFLKAGAWMQKVKIFFGFVMLAMAIWILSRIIETRYILIAFGIL
                     GVFFSVFMGIFEQAFNAVAKIKKSLLILVLAYSLSIFLGGIFGAKNFLNPLNLNSNMP
                     LNSSKLNYNFINDLDTLQKEIKTSTRPIMFNFTASWCENCKLLDELTFSDERIQEKLK
                     NFHLIKIDLTQNSDKDLEIMKEFGVFGPPVLIFFEKGKENLRITGFISAHDLLQKLEK
                     "
     gene            6741..7622
                     /gene="ppk2"
                     /locus_tag="R8X70_000066"
     CDS             6741..7622
                     /gene="ppk2"
                     /locus_tag="R8X70_000066"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HEF2927888.1"
                     /translation="MQEKVPAKIQEETKKDEIYVSVKKKKSTIEYEKDLKNLQIELLK
                     FQNYVKAKGLKVLILIEGRDAAGKGGAIKRLIEYLNPRGCRVVALEKPSDVEKTQWYF
                     QRYVTHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSNLM
                     FFKFYFSVSKEEQKKRFEKRRIDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTP
                     TCPWTIISSDDKKKARLNLLRFILSKVDYADKKIGDFSKIDQDLVRSGEEEIRKMEAN
                     LEKIDNKKADEKIKDLD"
     gene            7627..8817
                     /locus_tag="R8X70_000067"
     CDS             7627..8817
                     /locus_tag="R8X70_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEF2927889.1"
                     /translation="MLERVKNLSDKYYEKIVNLRHQIHMHPELEFEEENTARLVCEIL
                     DEYGIKYEKNIAKTGILASIEGKKPSTKKAQCVLLRADMDALPVQEETNLSYASKING
                     KMHACGHDGHTAGLLGAVLILNELRDEFSGTIKFMFQPAEEGSGGAKPMIEAGILENP
                     HVDAVFGCHLWGPLLENTAQIVSGEMMAGVDVFDLEFIGKGGHGAHPHTTIDPIVMAS
                     KFVSDVQCIISRRLRPVDAGVITIGKFHAGTTFNVIPQNAILQGTVRFLSDENQKLLQ
                     SSIENTAKAVALEFGGDFKLDYKREYPPLINDENAAKIARKAFGKVLGEQNIISVAKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLKNPTLHHSSTFCWEDENLKVLMQGDSMMALE
                     FLNS"
     gene            8899..10056
                     /locus_tag="R8X70_000068"
     CDS             8899..10056
                     /locus_tag="R8X70_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEF2927890.1"
                     /translation="MKNRVVLIVVILALFGVGAYFIFFNDNEKITYFTQKVKKIDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGSHVKQGDLIAQIDKDKQQNDLDITKA
                     QLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLEIQKNNYYSLKASVAELN
                     AQVIQLEITLKNAKKDLDYTTITAPIDGVVINVAVDEGQTVNANQNTPTIVRIANLDE
                     MEIKMEIAEADVNKIKIGTELEFSLLNDPQKTYRASIASIDPADTEVSDSSSSYSSSS
                     SSSSNAIYYYAKFYVQNKDNFLRIGMSIQNEIVIASVKDVIAVPTYAIKNDAKGYYVE
                     ILQNQKAVKKYVKFGIKDSINTQILEGVDENEELIISSSADGLVPEMKLRF"
     gene            10056..11981
                     /locus_tag="R8X70_000069"
     CDS             10056..11981
                     /locus_tag="R8X70_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2927891.1"
                     /translation="MLFLKNICKNIGENSILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDMPSSGSYIFENYEVTKLNSDEKARLRREKIGFVFQRYNLLSLLSADRNVSL
                     PAVYAGKSIHERSQKAKELLENLELVHKLNSKPNELSGGQQQRVCIARALMNGGELIL
                     ADEPTGALDSKSGIMVLEILQKLNAQGHTIILVTHDPKIAAQAKRIIEIKDGEILSDT
                     KDGNFNPKIILKAMPKEKKTFNLFKNQIFECFKIAYSSILAHKLRSILTMLGIIIGVA
                     SVVCVVALGLGSQAKVLESIAGLGTNTIEIYPGRGFGDLRSGRTRLNFSDLQTLRTLE
                     YLDAVDAHSSTSGIATYTNISLSARAEGVGVNNFAIEGLKLQVGRILNNEDIETNANV
                     AVLDFNAKKNLFPRQKSEDVLGRVVIFNSQPFKIIGVLQKDTEKPIEDNVVRLYMPYT
                     TLMNKLTGDRNLREIIVKVKDDVSSTLAENAIIRILEIKRGQRDFFTFNSDTFKQAIT
                     ANKRTTTILTASVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICSMGAILGVLLSVFVIFGFNTLSTDFPMILNAYSVLLGLLSSVLIGVVFGFF
                     PARNAANLNPISALSKE"
     gene            11983..13347
                     /locus_tag="R8X70_000070"
     CDS             11983..13347
                     /locus_tag="R8X70_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEF2927892.1"
                     /translation="MKNLLSILLAFFLSACGVKLSLPKEPIMSEESFKDLNLTYDWYK
                     AYDNAKLNEFLNFVLLNNSDINIARNTLLTALARADLIDYDFYPTLSANLGLSGDKNL
                     NSGAQSKKFSNGLNLSYELDIYGKIRDSSSASEFSAKASAYDLENLKISMINTALNNV
                     FELAYFNDADNLLKEYLANLEQMRELYAYKLELGKIEELDLLNIEQNLLRARQDLLRN
                     EQNRNLLIKNLQDLIGKQEGFAYIDYFKALTLSDFKNLNPNFNIPLEALVYRPDVRSK
                     LNTLKSAFKDYTSVQKSIFPSISLGGALNGSDKQFDDSFKFEVLSGNIKISLPFLDYG
                     RVKQNIKISQFDYESALVNYEQSLQSAMNEFALNYKDYQSNTMLLQILKDTSFKQELI
                     TQAYWEKYNLGKSELKDYLDASNTLNSAKQSLLGARFNLLKTINSYYQITALNYDERN
                     LEMP"
     gene            complement(13418..14587)
                     /locus_tag="R8X70_000071"
     CDS             complement(13418..14587)
                     /locus_tag="R8X70_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927893.1"
                     /translation="MQIKQFKAILLILIFSINLYANNTNHTIDEILSQTKNKSALSNY
                     ASKKDLKLLEQKLKEHKNVGIRIYGDSHTAADFFPRVIRGYLIKSNSIGFAYPLQPKY
                     QQNLNLDYSYKDYEILNSRNTDTAGIDFPLGGIIAKAKEKGAKITLDTNLDKKNFKVG
                     FVFKAPNNTNAFSIKDAQNKSYELRSVANKWSYKEYELVFPLQISALQKNAQLGGYFI
                     TSKEDNAYLDTIAINGAKSDLWMSWNKKVSEQELKLLSNDLILLAYGSNDALFKGFEK
                     NKFKKNLKDWIHTLKTYNKNALIMLVSPPTVVKKQGKKYTLAPDFFAIRQALYEVAKE
                     EKTLLFDMHQFMQDSGGKNKWIEQKLSLQDVHLTIKGYELMAKKLLDDLKKYVHY"
     gene            complement(14577..15557)
                     /locus_tag="R8X70_000072"
     CDS             complement(14577..15557)
                     /locus_tag="R8X70_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEF2927894.1"
                     /translation="MKIIRFFFILIIVFILVCLVMNQSIFSYIEQKYHFAFYPKNDIL
                     QEANGFKNKLEQIRAILSNEPLPQNIEENIMVQEDMDELNASNDFIDKNTTIEDIQQT
                     EDENVSFIDNTKLEVHKGDEFLFIGDSLMQGVAIALNRDLIDLGLKANDLSKQNTGLS
                     YKSYFDWAKATKEAFAKNPNIKYLVVLLGANDPWDIKKGGIYHRFGSDSWIDIYTYRV
                     NEIINIAKQHHAKILWFEIPPVKKNELNEKIQILNKIYSEEILKNKQIFINTKLFFSV
                     NDEFSTYIKNENNKSIKMRTDDGIHFTSNGAKEMSKLLLQHITIKEENAN"
     gene            complement(15558..16934)
                     /locus_tag="R8X70_000073"
     CDS             complement(15558..16934)
                     /locus_tag="R8X70_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEF2927895.1"
                     /translation="MTYFSLEFSILMIVFFAIYWAFKDNYKIQNILILAFSYLIYILI
                     NPYFALILFIYTFFIHFFALLIFVRRKRYIFATCITFIILNLCFFKYFPNIKGSLDQV
                     LSFLGLDFLNIELILPIGISFYTFASITYLVDVYKKHHLESFLNLATFLSFFPTLLAG
                     PIMRSAFFFEQAYQKREFKHANLIIILLIFGIVKKVLIANYLGIYAKNILDFPQSYNF
                     IQLLSAIYAYAVQIYCDFSGYVDLVCAFALMLGFTLPPNFNMPYLAKNLKEFWARWHI
                     SLSTFIRDYIYIPLGGNRKGMPRTIANILIAFILSGLWHGSTLAFGVWGLLHGLGIVF
                     IHLLALSKFSLQKIPALGRFLTFQFVCFTWIFFYYNKNLEDALEYFKACYNNFFQIPS
                     YNDIYMLVSFAVLFMIYPLFVNFREYCVRILNLTPFLLKPFVITFILLLVFAFMPNGI
                     PDFIYSSF"
     gene            complement(16984..17484)
                     /locus_tag="R8X70_000074"
     CDS             complement(16984..17484)
                     /locus_tag="R8X70_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344042.1"
                     /note="cytoplasmic iron storage protein; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HEF2927896.1"
                     /translation="MLSKKVVDLLNEQINKEMYAANLYLSMSSWCYENSLDGAGLFLF
                     QHASEESEHARKLITYLNETDSHVELKEVKQPEQNFKSLLDVFEKTYEHEQSITKSIN
                     DLVEHMLGNKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLISDNGNGLYLADQYIKN
                     LALSKK"
     gene            17823..18818
                     /locus_tag="R8X70_000075"
     CDS             17823..18818
                     /locus_tag="R8X70_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEF2927897.1"
                     /translation="MKKILALSVASFALAGALNAADLKIAGSSTVYPFTSFVAEEYAA
                     IHNTKTPIVESLGTGGGFKVFCEGITDISNASRAMKFSEFETCKKAGVTDIVGIMVGY
                     DGIVLAQNKANAPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTVEELVMSDISKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGLFGYGFLVSNVDKINAANIDGVKADEKNIADGKYDLARSLFIYINAKKNPKEAF
                     EFAKIYMSDDLAKSGGELEKIGLVPLNDELLKASQKHIEDRKILSDELVKAGKVF"
     gene            18828..19742
                     /gene="pstC"
                     /locus_tag="R8X70_000076"
     CDS             18828..19742
                     /gene="pstC"
                     /locus_tag="R8X70_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEF2927898.1"
                     /translation="MLKEKIIKFILFLCAFVSVLVSFAIMLTILIEALKFFQKESIST
                     FLFSSEWAADAAFMNADGTSKQGVFGAVSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFVITLIINMFSVYLINRFHKRKNL"
     gene            19739..20827
                     /gene="pstA"
                     /locus_tag="R8X70_000077"
     CDS             19739..20827
                     /gene="pstA"
                     /locus_tag="R8X70_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEF2927899.1"
                     /translation="MKKLFKKRQKASKSFKRLCKMGLYINLIFLCIFLGSVAYLGFPA
                     FKQTYIFVEANRNSPAYDLLSRAEQRKIRTGQITEKTWLLANSEVDQYMKQKYNRLSE
                     KQRILVDDLVQKGEIELKFNSNFFLNGDSKSPENSGILSSVVGTLLVMLVCMVVSVPI
                     GVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVG
                     GLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGS
                     ILTLAGAIGETAPLMIIGMIAFIPDVASSIFDPTSVLPAQIYSWSAMPERAFLERTAA
                     GIIVLLGLLVVLNLSAILLRKYFQGKLK"
     gene            20824..21564
                     /locus_tag="R8X70_000078"
     CDS             20824..21564
                     /locus_tag="R8X70_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEF2927900.1"
                     /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE
                     LIEFGESKEFFENPKQEKTKAYLSGAFG"
     gene            21636..24080
                     /locus_tag="R8X70_000079"
     CDS             21636..24080
                     /locus_tag="R8X70_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927901.1"
                     /translation="MFETLLKLSEEPLKSKIKDLYFSKFNYVGAKIDFCITQNLGLLG
                     EINLLWAEAKQGKSELKKSFVQLVLTIGKYKFYTEQTPNLLCAFDGEKIAFLPFACLQ
                     EIFYQSDINFSVTPSNHTSEQFLKLLKELDSILNTAQIFYYEKNDEELKTFIKENLTS
                     ENISKIKIDKNNFVSIYHKWNKMVKDTISIDWNLAKKSGIIDADFYLADLLSSENETI
                     SQNLFAILKKDYYEFNKTKSDLGSIINERTSFKDNQKAHHEFWAIYERPPREEFWDYI
                     IKRRDLLVDQDVRERKGAFFTPRIWVDKACEYLSKTFGEDYEEGYYIWDLAGGTGNLL
                     ANFTNKKNIFCSTLDKADIDVIHERIKNGANLFENHVFQFDFLNDEFFDEVDDKGKII
                     QKSKLPLNLQEILKDENKRKKLIIFINPPYAEATSATQVTNTGKNKDKVARENKICEK
                     YKDILGKANNELFAQFFIRIYCELEDCLMASFSKLKYVNSTNFIKFREKFKAKFLKGF
                     MVPANTFDNVKGNFPIGFLIWDMSKKEEIKKIKLDTFNKNGSFLGIKTFYNDQKESIN
                     KWIKIFDDKKSQEKFGFMGNPSPDFQHNSQLYLSLNKGIEHFNFYIFSLKNLLNGAVY
                     FSVRHAINATWINDRDQFLYPNDLYKNDDEFKSDCLAFMLFHGQNRISAKEGINHFIP
                     FSEKELGITKEAFESDFMYKFIKGKIKDENSLFGDELVKIEFSLEAQELLKAGKELFK
                     YYHTHSEDKGYLVNASFYDIKEFFQGRDEKGRMNRPSQAKDEHYKILLSDLNTALNAL
                     AKKLVPKIYEYGFLKE"
     gene            24083..25399
                     /locus_tag="R8X70_000080"
     CDS             24083..25399
                     /locus_tag="R8X70_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEF2927902.1"
                     /translation="MAKKQLSLTRLSFPIFWDLLSKYLTVIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFSFLSVGCSVVIAQAIGAKDHVLARKVIHQSLFLNALLGFVCGVL
                     ILWHGEYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMLI
                     GFLMDIVVICGNYYVLHYTKSELFGVGLSNIFARIVAIVALLVILFYKLKIHLKIKEM
                     IKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIYFQISMLIM
                     LIGQATSIANEIIVGKLVGARYENIAYKHAWRALYFSVIASALVALLNYLCQDFTMQI
                     LGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
     gene            25375..26022
                     /locus_tag="R8X70_000081"
     CDS             25375..26022
                     /locus_tag="R8X70_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEF2927903.1"
                     /translation="MARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPY
                     FCTFKSVYEFLDKSSSWMNEAKKRFEKKALKDDELIFLAKKYKIIFDENVKKAYFDKD
                     KIICQNKAKLDLFLRQNAKKIFTFYLKKWSKKTGLFYMHLSIKNMKTRWGSCNHNKAY
                     VNLNLKLIQKSLNAIEYVVLHEICHLKFPNHSKEFYDFIEYFMSDFRQREKEFLS"
     gene            26064..27584
                     /locus_tag="R8X70_000082"
     CDS             26064..27584
                     /locus_tag="R8X70_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927904.1"
                     /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYILSKEENTYHFSIDA
                     DEENLKTFCDSLNFMSHSVFLKKFDVKAGHGFSPCIPEDKEFSKFSYITHLNSNAYQE
                     KKLLNRNEWGVFCECEFSSNLSEFEKINEENFNTFLNLAFDLLSQEKKIYLKDKNGIY
                     EFSLFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRLNAMFRKNHNL
                     DFNDFKIRLARDLFCFALGLKLFENEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFE
                     FINAKARELIFSKEDKNMARISYLVSRYKEKAFILELSKDDEDILLINKELNLLKLCL
                     PKHSKELYEEIQKDEIGARLLENFAKEFPLLNESFELKNNFYSLLCLVGRVLNLDENL
                     HKAGEKLLKIADESKMPRGVKIDYRLKEDKSFDYTRTLRSTMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDDLREKKQSEMALISGSLFEHKALLRNTLKHLKNCQLSDVPLRI"
     gene            27565..29751
                     /gene="hypF"
                     /locus_tag="R8X70_000083"
     CDS             27565..29751
                     /gene="hypF"
                     /locus_tag="R8X70_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HEF2927905.1"
                     /translation="MCHLGYKLQISGLVQGVGFRPLVFELASELGLHGEVKNDGFGVE
                     IILACTKEECENFIYKLKEKLPPLARIDSIDITEQTTTNYTHFSIGTSLQNAKTTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKNLPYDRCNTTMEALKMCEF
                     CKSEYEDPKNRRFHAQPISCPQCKIDVFLKNKKGEILAQDDEAFKTCAKLLKQGKILA
                     IKGMGGFHLMCDAFNLEAIKELRLRKNRPKKPFALMCRDMSDAKELCFVDEEEEKLLG
                     SILAPIVILKAKKAFSLIAPDVDKLGIMLAYTPLHLLLFRYFDGVLVATSANLSGESI
                     IKDEDNLLKKLGNVFDFYLDYAREIHNPSDDSIAQVVNGKTMFLRTSRGLNPTYLEIK
                     SDKKGVFLALGSELKNEFVIFYENKLLISPYIGDLKSVDVDERFFSLLDFFKQSYDLS
                     FDQILCDKHPNFSYTKEFYNTYKIQHHYAHFCALYFEYEKEFKKDEKALGFIFDGTGY
                     GDDGKIWGGEIFIGNLKQYERIAHFENFTLINSDIKNIQNLALSLIWHYDLEDEAKIF
                     LSKIPKIKLENLKKIHTHSTLQTSSLGRIIDAFGSIVFNMEKISYEAQIGLMCEAFYD
                     ENLDFSYELFSKDGEINFKELIEGALKDEKSKAITGMFNALANLIITFSKTYDLKVLL
                     GGGVFQNKTLLQILKAKNFDFLVSLKYPCNDSSIALGQMVHFLKKD"
     gene            29828..30577
                     /gene="hypB"
                     /locus_tag="R8X70_000084"
     CDS             29828..30577
                     /gene="hypB"
                     /locus_tag="R8X70_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HEF2927906.1"
                     /translation="MCKDCGCSINSAHTHEHSHHHDHHHENPSLKESKTIEVISKILS
                     KNDEEAKHNRAHFNEANTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETN
                     NDALRVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIDDVDLLFIENVGNLVCPASY
                     DLGEHLNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDVKEATRLIKEL
                     NPRADIITLDAKNGTNMELWYKVLKLKKELF"
     gene            30577..30858
                     /locus_tag="R8X70_000085"
     CDS             30577..30858
                     /locus_tag="R8X70_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HEF2927907.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR"
     gene            30842..31933
                     /gene="hypD"
                     /locus_tag="R8X70_000086"
     CDS             30842..31933
                     /gene="hypD"
                     /locus_tag="R8X70_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HEF2927908.1"
                     /translation="MNFIDEFRDKESILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRVRIDTAIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLEIAKQNLNKNIIFFAIGFETTTPMSALLLQKVIEEKIN
                     NVFFHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVS
                     GFEPVDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFRVCDFEFRG
                     LGLIKDGGLELKEEFSAYDASKKFDCTVQSKNESKACICGQILRGLAKPYDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNA"
     gene            31930..32904
                     /gene="hypE"
                     /locus_tag="R8X70_000087"
     CDS             31930..32904
                     /gene="hypE"
                     /locus_tag="R8X70_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HEF2927909.1"
                     /translation="MKNISLAHGGGGEEMNELLTKLFEIFDNEILNANNDAAILGNLA
                     LSTDSFVLSPIFLDDEVNIGKLCVCGSVNDVLMVGAKPKYLSLGLILEEGFELEKLER
                     ILKSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIIAKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEADVKSDCKALDKEVLELLEKDIKVVAMRDATRGGLSAV
                     LNEWAKQSGNDLLIFEEKIKIQDEVLGLCELFGYEAFELANEGTFILCVEKEDELKAL
                     EILKKYNVNASIIGEVLEEKKARVILENAYGAKRFLEAPKGELLPRIC"
     gene            32904..33248
                     /gene="hypA"
                     /locus_tag="R8X70_000088"
     CDS             32904..33248
                     /gene="hypA"
                     /locus_tag="R8X70_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HEF2927910.1"
                     /translation="MHELSIVESLIELCEENAFAHKAKSVQEIYVKIGRLSGIEVELF
                     RRCFETFRENSELCKNAKLFIELAPLEILCLKCDQTSVLEENVFKCPKCESIEYKISQ
                     GEDLHLMRLVME"
     gene            complement(33356..34321)
                     /locus_tag="R8X70_000089"
     CDS             complement(33356..34321)
                     /locus_tag="R8X70_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEF2927911.1"
                     /translation="MYRKELQNLLSKNQIDNFFFLYGADNFQSELYADFIKEKYQADE
                     ILKLFFEEYSFTRASDFLSGGSLFSEKKLLEIKTSKKIPTKELKVLVELCKNNKDNFL
                     LLELYDESSKQSDIEKIFSPNFVRFFKANNAREGIELLSIKAKQLHIEITQNALFTLF
                     TSFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNIGSFESFFEKILKRADFKNELEK
                     ILDNFNEIALINSLSSAFYRLFKIALYAKIYGKVDFKELLGYTPPPQVAQNLNEQAFS
                     LKIKHYKEIFNLLLKSEYELKTNSKLAKKEFLIATLLKLARIIKS"
     gene            complement(34314..36248)
                     /locus_tag="R8X70_000090"
     CDS             complement(34314..36248)
                     /locus_tag="R8X70_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HEF2927912.1"
                     /translation="MKEFLNNLNYGISAHEVSNEFKQILRELLANNIIKEHKNRYYLN
                     NGYVFGTLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAAKLLPLKKKRPS
                     AKVVLVLKRANETSLVITKRYGEAVLGMNIKTGLSTTLKASQKSLKALPLGTILKIEN
                     QDNNIIEVLGHIDDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDL
                     RALPFCTIDPIHAKDFDDAIYFDTQKREIYVAIADVSEYVHAYSAIDKEARNRGFSIY
                     FPHIAIPMLPRPLSENICSLKPHLDRLAYCFKITLDLDCKVVKEELFEGIINSKRRFN
                     YDEVDEILIQKPDLKELSWLYELFEITKTLRKNRLKNAFEFRTEELRMNLDENLSLQS
                     TIFEKDTPSHNLIEDCMLLANKAAAKLIDVGVFRNHSSADMKKIDRLLNELLELGIDV
                     KLKPNLPELIRDIQALADELGLRAEVDKLIIKAQKKAEYSSENGGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKKDEKLFNYLLLNIQSTCENLSVLEREADKVAYDFMDRK
                     FARWAAKNIGKKFKALVVQNDGICIAKLDDEIKGADIILYDTRVNLLESVEVQILEAD
                     IIMAKIYAKITQRLRKESNV"
     gene            36371..37393
                     /gene="ilvC"
                     /locus_tag="R8X70_000091"
     CDS             36371..37393
                     /gene="ilvC"
                     /locus_tag="R8X70_000091"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEF2927913.1"
                     /translation="MAVTVYYDKDCDLSLIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     VIGLREDGASFSKAKSAGFEVMSVSEASKVADVIMILAPDEIQADIFNAEIKPNLSEG
                     KAIAFAHGFNIHYGQIVAPRGIDVIMIAPKAPGHTVRNEFAIGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEIKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAM
                     KGVLKDIQDGNFAKDFILERRAGFARMHAERKNMNNSLIEQTGRNLRAMMPWISAKKL
                     IDKDKN"
     gene            37396..38448
                     /locus_tag="R8X70_000092"
     CDS             37396..38448
                     /locus_tag="R8X70_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEF2927914.1"
                     /translation="MSKKLIQIKRYLIIAILFLICVILFLGILIQYQDSQNALKFAQN
                     SSKNITIEPKQENISNENHLGIFKEIPYKDENDNFQENNQSILEEQIKDLNLSSIIDG
                     NLSKIDENLSLVVEQNLSKEENLTKDMNLSKTKQARLAIIIDDMANISQVRALQALKL
                     KLIPSFFPPDKNHIDTPKLALKFDFYMVHLPLAAMNYTKPELDTLNPSDSEKRIFKKI
                     QQVKKDFKDLKFINNHTGSLFTSDEKAMKKLYKAFEKEELIFVDSKTIASSKAPKVAK
                     ALGQIYIQRDVFLDNRDDVAYIKNQLIEAVRLAKQKGFAIAIGHPRKNTFKALEQSKD
                     LLKSVELVYLSEIYAK"
     gene            38438..39208
                     /locus_tag="R8X70_000093"
     CDS             38438..39208
                     /locus_tag="R8X70_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEF2927915.1"
                     /translation="MQSELPSAYLELFKELKNPPKKLYYKGNLKLLEQRKIAIIGSRR
                     MSTYTKNCVFELSNLLKNSKISVVSGGALGVDISASMAAMPSTIGVFANGLDEIYPRS
                     NEKIIKQIYENALALSENESYYKPKPYDFLLRNRLIVALSEAVVVAQADLQSGSMQSA
                     RLALELNKPLYVLPQRKNESDGTNLLLQEKNANLLLDFKEFASCFGVIEEEKDEFLDF
                     CRQGVSVDEATQIYGEKVYEYELEGKISIEGLFIRVLA"
     gene            39205..39585
                     /gene="ruvX"
                     /locus_tag="R8X70_000094"
     CDS             39205..39585
                     /gene="ruvX"
                     /locus_tag="R8X70_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEF2927916.1"
                     /translation="MRALALDVGLKRIGVALCIDKIVIPLEGIIRKNRNQAANEVKNL
                     LQIHDISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEIRFVDESGTSKEALGYGVA
                     NTRKKDAKLDSLAALIMIKDYFGI"
     gene            39575..40450
                     /locus_tag="R8X70_000095"
     CDS             39575..40450
                     /locus_tag="R8X70_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEF2927917.1"
                     /translation="MEYNLASIYNDKELENLKNSFKLPKKICCFINRLKCDNLTLERE
                     FQDLNLEYEKLNEYCYLFKACDKSILSSMQAFNEFKFYIQNYASYLCALNLDVKAGQS
                     VLDMCAAPGGKSINLANFMQNEGYLACNEASKDRFFTLQKNLKNYGVKARVFMKDGKN
                     IGNLCPLKFDKILLDAPCSTLAKMGLELEKSSKEIKNIAKLQKKLLHSALKALKVGGE
                     LVYSTCTFSKEENEEVIENALKSDFDIELLDINLENALAKNGQSSEFEAISKCKRILP
                     CEEYDGFFITKLRKN"
     gene            complement(40673..41173)
                     /gene="msrA"
                     /locus_tag="R8X70_000096"
     CDS             complement(40673..41173)
                     /gene="msrA"
                     /locus_tag="R8X70_000096"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEF2927918.1"
                     /translation="MKNIILGGGCFWCVEAAFENFEGIIHTEVGYTGGNDNPSYESVC
                     NGDGNIEVVKIIYNEAKISLEQILSLFFKIHDPTSFDKQGADIGIQYRSAIFYENQSD
                     KNTIEDFIKKEQVNFSLPIVTQIYKLQKYYKAEDYHQHYFIHNPNQSYCRFVIVPKLE
                     KIRNYE"
     gene            complement(41221..41739)
                     /gene="ppa"
                     /locus_tag="R8X70_000097"
     CDS             complement(41221..41739)
                     /gene="ppa"
                     /locus_tag="R8X70_000097"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEF2927919.1"
                     /translation="MDLSKIKIGDIPNKINAVIEIPYGSSIKYEIDKDSGAIMVDRVM
                     ASAMFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     VEILEKAIKNYK"
     gene            complement(41749..42324)
                     /locus_tag="R8X70_000098"
     CDS             complement(41749..42324)
                     /locus_tag="R8X70_000098"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEF2927920.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADADVTHYSTGDLLRAEVAS
                     GSELGKTIDGFISKGNLVPLDVVVNTIVSALKAAPTKTVIIDGYPRNVEQMVEFDKVL
                     SEQNEICLKGVIEVRVSEQVAKDRVLGRSRGADDNEEVFYNRMKVYTEPLEEIISFYQ
                     KKKLHFIIDGERTIEPIVADMKELIKKIQSI"
     gene            complement(42321..44072)
                     /gene="aspS"
                     /locus_tag="R8X70_000099"
     CDS             complement(42321..44072)
                     /gene="aspS"
                     /locus_tag="R8X70_000099"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEF2927921.1"
                     /translation="MRSHYNTDLNSTHIGEVVKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKEAHEIASRTRNEFVLIAEGKIRPRGEGLTNPKLKTGEIEVVVSKLII
                     ENESAVPPFGIGDESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDVEMSFCEQKDVIATAETFLKDIFKACGKEIQIPFRQMPYKE
                     AMENYGSDKPDLRFDLKLIDVIDIFAKSNNEIFANIAKDSKKNRVKALRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKEDGLKGPLCKFFNEEDLNELIKRCELEVGDVVF
                     FGAGVKKTVLDYMGRFRIFLAGELNLINPDALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNIDEADLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSAA
                     SNEAMRELGIKLRENIK"
     gene            44165..45025
                     /locus_tag="R8X70_000100"
     CDS             44165..45025
                     /locus_tag="R8X70_000100"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEF2927922.1"
                     /translation="MQNKIDYKNIKKIGLAARPNSNLDKEILILKEILEKKGVELLLY
                     KESSEIVKLPKYDLDTLFELSDFVISLGGDGTLISLCRKACEYNKAVLGIHAGHLGFL
                     TDFKVDEAEVFFEAFFRGEFRVENPFLLSIILESNDGQIMQKFAFNDVVISKDRKASM
                     AHIEVFRKAKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFDLEIGAKDCIFSIDGQENYKMNDFKSVKVGLSDKSVALIHPKNRDYFQ
                     ILREKLNWGH"
     gene            45025..46548
                     /locus_tag="R8X70_000101"
     CDS             45025..46548
                     /locus_tag="R8X70_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEF2927923.1"
                     /translation="MINRVLMKENLGFKEVELEISQGLTVFTGLSGAGKSVLFKGILS
                     AFALSESEAKLVEIELDDKIDLEEYGIEGEEENVFKLLKDKNTKYFINNQSISKKSLI
                     HLSKKFIKYLSAKEINEFSNEKFLNLLDALECAKNPEFEDFLSHFKDDYKQWLQISEE
                     LTTILEEEKRIEELKELASTQIERISKINPKVGEYEELLNLKKKLSKKDKIEAAWEKA
                     SAIFELEKVVIDALNLSEKDTSFFSECLNELRIITENEKIEDLDFDIEEVLNRIEDLS
                     SLIKRYESIENALEVLENKKNELAHYDNLSFEKKELEKKLEKIEKKINQSTQLLTQAR
                     MQNLKTLEDFLNDYLKNLYMKNVSLELVDTSKITSLGKDEIKLSINAANLKNLSSGEL
                     NRLRLAFIATECRILNSGTGIIFLDEIDANLSGKEAMSIANVLNELSAFYQIFAISHL
                     PQLSSKAHNHFLVEKNASCSTVKKLKDKERIKELARMISGETITDEALEFAKTLFKA"
     gene            46637..47881
                     /locus_tag="R8X70_000102"
     CDS             46637..47881
                     /locus_tag="R8X70_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEF2927924.1"
                     /translation="MNKKILLIDDNKMLGKLLAKKIQTTLNHEVDIVFSLAEVKALPN
                     DEYFLTFADLCLPDAPNGEVVDYVLAKNWPVIVLTASNDKATRDKFMDKDILDYIFKE
                     SDTCIDQIIDSIVKLERYAKTKVILALSKLPERNEIKKILTQRKFNVLAAAHGEEAMS
                     YLNDNSDVKLIIADANMPVISGSELLSEVRARFSDDELGVIILGDKDDALEASLLVSG
                     ANEYLVKPLSKESLNCRLDKCLHYMANMQFLSIYNNLDPISGIKNSNALLSCVEDYLN
                     EIVSKEEEFAFAFLDIDNLRNLNEEYGYEVGDKIIKICADEIVNETKGRDIVGRYSAE
                     KICIVLKNISQERAIKILSRIRVNIKKVGILVNLDEVFFTASIGVVFAKSGDKFEILV
                     DKASKALSQAKANGKDRVEVCS"
     gene            47872..48684
                     /locus_tag="R8X70_000103"
     CDS             47872..48684
                     /locus_tag="R8X70_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEF2927925.1"
                     /translation="MFLNLEFKDGLKIIDTHCHLDSEVFKEDLDELLKHSFDNGIEKI
                     IIPGADIKDLPYAAELASKYENVFFAAGVHPYELEGFDEKILRAYLQDEKCVAVGECG
                     LDYFRFKSEDLKEREKEKEEQKRLFVAQLELAKEFKKPVIIHSREANNDTYEILHEHS
                     KDLVGGVLHCFNASEHLLRLSDDGFYFGIGGVLTFKNAKNLVNILPQIPKDRLLLETD
                     APYLTPEPYRGKRNEPLLTQFVANKMSEILDLPRQELLRICLENSYRLFFKG"
     gene            48687..49820
                     /locus_tag="R8X70_000104"
     CDS             48687..49820
                     /locus_tag="R8X70_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEF2927926.1"
                     /translation="MKKIIFCFILFYNFLFAQTTTPEFYERQMSVLRNLDIDPSFISD
                     LAFVQSQQDLRSKHAPTLIDGIQNFSKVTPMIRKILAQQEVPEEILYLAMVESGLKAH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAAVHYLKSLKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQAGSDDLRVLIDPDKKYLSLETRNFIRKILTLAFLANDRDF
                     LLDKDGALVNYALNNDFAKVDAPSSVALKDLAKNLNMDLATFKKYNPHFKHGFTPPGK
                     GYYMYIPLNKVAFFDKNFKVEKLAKVDTTIPMTKIYVVKSGDSLYKIAKKYNTSVEQI
                     RELNKIAKNHLSINQKLIIPIKENKNANYKTKAKENFTQVVSR"
     gene            49765..50604
                     /locus_tag="R8X70_000105"
     CDS             49765..50604
                     /locus_tag="R8X70_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEF2927927.1"
                     /translation="MQTIKQKLKKTLPKLLAASLVATFSSGCFGGLFSSVGSAQIYYP
                     SNDFHSSPSGSGSKGTMKPYTINGKTYYPTVVSVGETADGIASWYGPGFHGKKTSNGE
                     TYNQNGLTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQID
                     MIAAGTAPVRLEVIGFGSANSGNNVVHSNINYGASGGIANNGQIYEGGNFMVQIGAFK
                     NPSGAQTIASRYKTYRTYSSTIRKSSVDGLSRVFLTGFRSEEEARDFAASGAFAGAFV
                     VRE"
     gene            50608..51096
                     /locus_tag="R8X70_000106"
     CDS             50608..51096
                     /locus_tag="R8X70_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HEF2927928.1"
                     /translation="MIELIFLDVDGCLTDGKIIYTSNGSVIKEFDVKDGAAIEAWIKL
                     GKKIAIITGRNCPCVSARAKDLKIEIVHQGVKDKLTCAKKILEELNLDFSQCAAIGDY
                     FNDKNLLENVGLSFKPKDAHRDLKVDITLDKKGGKAAVAQMIEYIIKKNDMQEEWDKL
                     WL"
     gene            51087..51599
                     /locus_tag="R8X70_000107"
     CDS             51087..51599
                     /locus_tag="R8X70_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927929.1"
                     /translation="MAIRIFGILIALFTITFTILSLQDPYSLNIKSYALNFKNIEASD
                     LNAYELNASNVKSYYKAQSWARYTDKDEFDNFVNFNLDFNLSANKLELKGKEMDKVLL
                     EGNVTYIGLNNTKIFADKVEYAPKNKILSTNTGFKALINGSIINGNTLNYDVEKKILQ
                     VQGVNAWLER"
     gene            51611..52042
                     /gene="lptA"
                     /locus_tag="R8X70_000108"
     CDS             51611..52042
                     /gene="lptA"
                     /locus_tag="R8X70_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HEF2927930.1"
                     /translation="MSISISLASQIEVKALNFYSDENKGESILSGNVEIIRGDDILTA
                     EKVIIYTDKNRKPMRYEAVQNANFKIVLKGKTYKGSGDKFIYNVAKDIYEIDGNAFIN
                     ELESNQKLYGDRIIVDKRNNVYRVESKDKKPARFIFDLEQK"
     gene            52039..>52423
                     /locus_tag="R8X70_000109"
     CDS             52039..>52423
                     /locus_tag="R8X70_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEF2927931.1"
                     /translation="MIISAKFITSLDKFDKNFASHFSEVAFLGRSNVGKSSLINSLCK
                     QKKLAKSSATPGKTQLINIFEVLCKKDEDKFSIHFIDLPGFGYAKVSKNLKEIWNKNL
                     DEFLKLRSSIKLFVHLIDSRHTNLDI"
BASE COUNT        18181 a         7190 c         9543 g        17509 t
ORIGIN      
        1 attttgataa attattgagt ttatttttgc taaaattata ttttttattt ttacaaattt
       61 tataaatatt ttattattta aaggaaaaat atggagttaa gctactatga aattttagaa
      121 attactcaga gtgctgataa agataccatt aaaaaagctt atagaaaaat ggctttaaaa
      181 taccaccccg atagaaatca aggagataaa gaagctgaag ataaattcaa gcttgtaaat
      241 gaagcttatg aagttttaag caatgaagaa aaacgcgcta tttatgatag atatggtaaa
      301 gatgctttaa agagtggcgg ttttggatca gggggagcag gttttggtgg ctttgaggat
      361 ttgggtgata ttttttctag tatttttggt ggcggttttg gtggagcatc gcaacgccgc
      421 aaaaaatcaa gcgatgaaaa atttcaagcc gaacttgtag taaatttaaa acttagtttt
      481 aaagaagcgg tatttggctg taaaaaaaat atagatttta cttacaaatc ttcatgtaaa
      541 acttgtagcg gaacaggagc taaggatgga aaacttcaaa cttgtccaaa atgtaagggc
      601 aggggacaag taggaatttc tcaaggtttt atcacttttg cgcaaacttg tcctgattgt
      661 aaggggagtg gagaaagtgc aagtgagaaa tgtaaagatt gtaagggtag gggctatgaa
      721 gagcttaagg atagtgtaga agtaaacatc cctgaaggta tagacaatgg gatgaattta
      781 agagtcgcag ctaaaggcaa tcttagcaaa agtggcgata ggggggattt gtatgttaaa
      841 gttatcgttg aagaggatga tacttttata agagatgatg aggatattta tatagaattt
      901 ccggtatttt ttacccaagc tatattagga caaagtataa aggtgcctac tatacgaggg
      961 gaagcgactt taaatttgcc aaagggtgca aaggatgggc aaagatttgt gcttgaaaga
     1021 gagggtgtaa aagatgtgca tagctctcgc ataggcaatc aaatcgtaca aattgctatc
     1081 aaatttccaa attcactcaa tgatgagcaa aaagaacttt tagaaaaact cagcgaaagt
     1141 tttgggataa aagatggtat gcatcatgaa caaaaaggat tgtttgaaaa aataacccat
     1201 tggtttaaat cttaattttc ttcaagcttt ttagcttggg aaaatttctt tgaatttaag
     1261 ttagaaagat attttatata aatttaagtt ttaaaaataa ggcataaaaa aaggtggagt
     1321 aaaactccac cttgaactta gactttagag cttcttagaa tttgtaaaga gcttgaagtc
     1381 ttacagcatc atgatgagtg ctatctgtat ctttatcaac atttacataa gaatagaatg
     1441 ctgagaagtt aagttttgga gagtatttat aatctactct tgcaactgct tcaagtttgt
     1501 ctccaccaga atgattttct gttttagttc caccgtatac gaagtcagcg cctacacgaa
     1561 ctgtttcgtt gaaagtataa cctgctttaa caaatccgaa gatatttcta ccagtgtcac
     1621 catttagttt tgaacctttt gtatagaaaa tttcctcacc tgcaagtaaa gagccaagat
     1681 taccttgatc ttcgattaca gttacggtag ctttatcttt tttaccgtag tataaaccac
     1741 caagagttgc atcccaacca tttacttcaa tactaccgtt taaagcaaag aagttaccat
     1801 ttccatttct aagatctttg cgctcattat caaggctgtt tcctaaataa gcaccttcaa
     1861 gagtccaatt taccccatca aagatagtag tgttataagc tgcatctaca gcatagaaga
     1921 aagcattgtc agtcatataa gctaaccata attgtgggtt taattgacca ttaaatactt
     1981 cataagaacc gatagctgca gcaccataaa gattttcatt gaaatttaaa actgtgccta
     2041 aatctccacc ttgctcatcg ctgttatagc tatctacagc aaaagcagct agggttaaac
     2101 catcaatgct gttgtttact actttaacac ctgttcctac taaaccatcg attgcattat
     2161 cagtccagat ggtgttaagt tgttgtttac ctaggattac acttgtagct acattttcat
     2221 ctgtgtaagt taagtataat tggcgaacat tcaatgttga tgaattatct gctgtatatg
     2281 aacgagttgt agaactatta tttgctccat aaccaccatc ttttgcattg tagtcaagtt
     2341 gaacgaaagc tttgaagttg tctgctatag caccgctgaa gttaagttga gctctgtatt
     2401 tgtgatcttg ttttccagag ataccgctac cttcattttg agctacacca ttgatatcgc
     2461 tccactcatt gcttgtttcg tatctatatc ttaaaacacc tgatacatcg atatctttga
     2521 tcgcttcttc aagtggagta gcattcgcca ctgagaaagc acctgcagca agagctgcta
     2581 ctaaactaag tttaactagt ttcatgagaa ttctccttgt ttaaaattaa ataaaacgct
     2641 gtaattgtag cacataaatc tatagttttt tcttaaaaag cacttaaaat aataaaaatt
     2701 ctaaattttt agagtggaaa atataataaa aataggccta gcttggtatt tactaggcct
     2761 atattaagga gtttttctta tgaatgtttt cggttcattt ggaagtataa gtcttaaaag
     2821 taaatgagaa gtaatcaaac ataaaagatg aaaatttaat tctcttatgt ttatatttat
     2881 aaaaaattaa ttcgcaattc cataaatgaa aatcgcaaaa atgatcaaag gtatgatgaa
     2941 tttaatataa taaaaccaaa ttttaaatcc catgcttttt aatttacctt cattgctaag
     3001 ctcttttatg ctttgctctt tgccaagaac ccagcccaca taaatgcagc aaaaaaaggc
     3061 tgttaaaaca aataaaatat ttccactgat aaaatcaaaa ctatcaaaaa tatttttccc
     3121 tttgataaga gtgatatctc tccaaggtcc ataagtgagt atacaaggaa tgtttcctag
     3181 tatgaaaatc gaacctaggg ttaaattaat agctgttttt ttagaaagtt tgaatttttc
     3241 ttctaaaaca ctgatgataa cttggtatat aggcaagctc gttgttaatg ctgcgatgag
     3301 taaaagtata aaaaataaaa tgcaaatgat agtcccaaag tggatatgag aaaatgcaat
     3361 aggcagggtt tgaaacacta aagaaggtcc tttatcgggc tcaagtcctg ctgcaaaaag
     3421 tgcaggaaaa atcataaagc ctgctagcac agcaataaga gtgtttaaaa ctcctgtata
     3481 aatggcagtt ttcgtcatgt tttcattttt gctaagatga gatgaaagag ttatcatcac
     3541 gccaaaaccc agagaaagtg caaaaaagac ttgtcctaga acatcgatga gtagttttgg
     3601 ggatagaatt ttgtcaaaat caggcgtaag ataaaatttt acaccattta tagcaccttc
     3661 aaggcttaag ttgcgtccta caacaagtat aagacaaatg aaaagcaaag gcatgaggaa
     3721 tttaactgat ttttctatac catctataat gccacgcctt aaaatgatat aattaataag
     3781 aacaaaaagt gtagtaaaaa ttcctacgcc taaaggattg aaagaaattt tttcattaaa
     3841 aaaatactcg gtaaaatctt tggttatggt atgggaaaga ttgaaattcc ctatgatcaa
     3901 ctcaaaaata taaacaaaaa cccagccacc taaaaccata taataagcca tgataccaaa
     3961 actacccaaa agccccatat agcctacaaa tttccatttg cccttaaaag cgtcgacgct
     4021 gtttgtcatg gattttctac cgatgacatt ttcagctaag ataacaggaa tgccaatgag
     4081 tatcattgct acgcaaaata ctaaaacata agcaccaccc ccattttctc ctacaagata
     4141 gggaaaacgc caagtcgcac caaaacctat ggttgctcct gcgacggtta aaatataagt
     4201 aagagtgcta ctccatgttt gtctttgcat gcttatcctt tcaaaaaaat taaattgtag
     4261 cctaagaata ctttaaaaaa ttataaattt tgcatatagt ctaaattata ggtatttttt
     4321 aagcgttttt gtatagtttc gtgccaattt tgtgaaatca gtgtatcgag tttgcttaat
     4381 ttttcaagca agcttggatt ttgtttgagt gcttgatggg ggttgtaaaa taaatgattg
     4441 agttctagga cgcttaaatt tataggattt ttttctataa gctcgatttt agaatgagca
     4501 tggatttttt taccctctaa aacacgataa taccacccac ttaatcctgt tttaaaaatt
     4561 tcttgtgtga aatttggatt ttgatggact tttgaaattt taacacaagg tttgcgcggt
     4621 tcgcttactt gcaaaatagc attttcaaat cggtgtatat cgcctataca aacattttgt
     4681 tcgtgtaaat tttcaagggt taaattttct cccatcatac cgcatgcaag tttttttcca
     4741 agaaaatttt cccaaagggc gtagttatga taagaatttg caaataaggc tttatttttt
     4801 ccgccgtgat gttttgtatc ggctatgtta tcgttaagaa tacctaaagc attgatatct
     4861 acttcttcta aataaagatc ttttataaaa gcacttttaa agcctttata atctttgata
     4921 tgtcctatct gtaagctttt gagtttcatt tttctaactt ttgtaacaaa tcatgtgcac
     4981 tgataaaacc agtgattcta agattttctt tgcctttttc aaaaaatatc aaaaccggtg
     5041 ggccaaaaac accaaattct ttcataattt ctaagtcttt gtcgctgttt tgagtcagat
     5101 caattttgat taaatgaaaa tttttgagtt tttcttgaat tctttcgtcg ctaaaagtaa
     5161 gctcatctaa gagtttgcaa ttttcacacc aagatgctgt aaagttaaac atgatagggc
     5221 gggtgctagt tttaatctct ttttgaagag tgtcaagatc gtttataaaa ttataattta
     5281 attttgaaga atttaagggc atatttgaat ttaaattcaa aggatttaag aaattttttg
     5341 cgccaaagat tccgcctaaa aatatactta aagaataagc caaaaccaaa atcaataagc
     5401 tttttttaat cttagctact gcattaaaag cttgttcaaa aattcccata aatacactaa
     5461 aaaatacgcc caaaattcca aaagcgatca aaatatatct tgtttcaatg atacgagaaa
     5521 gtatccaaat agccatagct agcataacaa agccaaagaa aatttttact ttttgcatcc
     5581 aagctcccgc ctttaaaaag ccaagaccta aaccaatgaa aagcaaagga attcccatgc
     5641 caaagctcat gataaaaagg gcactagctc ctaaaagtgc atcgcctgtg ttggctatgt
     5701 agatcaaagc accggttaaa ggagcagcta cacaaggacc tacgataaga gccgataaaa
     5761 agcccatgat ggctatacct agcactcctt tgcctttttc actttttttg tggagaaaat
     5821 tttgaaattt taaaggcagt tcaaagcgaa agctttcaaa cattgccaaa gcaagcaata
     5881 caaaaattag cgcaaaaaag atcaaaacac taggtttttg caaaagtcct tgaacgcttg
     5941 ctcctaaaaa actcgctata actccggcaa tagcataggc taaagacata aaaaatacat
     6001 aaataaaaga taaaaagaag ctgtgctttt tagaaaattt tgtttcgctt ttagctacga
     6061 tgagtgaaga taatatagga atcatcggca aaatgcaagg agtaagtgaa agtaaaagtc
     6121 catagcctaa aaagcttagt aagatccaaa aaagattatc tgtggctaag aaatttgcaa
     6181 tcatactttc ttcggatttt gcactcaagg ttttttgctt ttctttataa ggggctgaaa
     6241 tttcaaattt attatctttg tgttttagat caaaatacca agtttgagga ttgtagcata
     6301 agccttgttc ggagcagcct tggaattgga gtttgatttg attgttttga ttttgtgcaa
     6361 aacgctcaag tagtaggtta ggcaaggcta gatttaaatc ttgataatac actttttcat
     6421 tgagtctttg ggtgctaggt gggagattga ttaaagagct gatatcgttt tgattgagat
     6481 agagtttaag ttgattagaa taaagataaa tatcttttcc taatttgata tcgattgata
     6541 cagcgctatc ataagaactc gattttactt caaaggcttc atttaaagat aaaacagagg
     6601 caaataaaaa ataacaagtg aataaaagtg taaaaataaa acgcattgtc atcctaggct
     6661 taaatgtaaa atttgtgatt ttaatgtgaa ttatagtttg ttatggtaaa tttgctttaa
     6721 atattttata aaggttgctc atgcaagaaa aagttccagc aaagattcaa gaggaaacaa
     6781 aaaaggatga aatttatgtt tctgttaaaa agaaaaaaag cactatagaa tatgaaaaag
     6841 atttaaaaaa tctacaaatc gagcttttga aatttcaaaa ttatgtaaaa gcaaagggtt
     6901 taaaagtgct tatacttata gaaggacgtg atgcagcagg caagggcggt gcgataaagc
     6961 gtttgataga gtatttaaat cctaggggat gtcgtgtggt agctcttgaa aaacctagcg
     7021 atgttgaaaa aacgcagtgg tattttcaac gctatgtaac gcatttgcct tctgcgggtg
     7081 agattgtgat ctttgataga tcttggtata accgcgcagg agtagagcct gtaatgggtt
     7141 tttgtactcc acagcaacat aaagactttt taagagaggt gcctttgttt gaaaatatga
     7201 tatcaaatag caatttgatg ttttttaaat tttatttttc tgtttctaaa gaggagcaaa
     7261 aaaaacgctt tgaaaaacgc cgcattgatc ctttaaaaca atacaaactt tctcctgtgg
     7321 atcaaaaatc tcaagaatta tgggataaat acaccttagc aaagtattct atgcttttag
     7381 catccaatac cccaacctgt ccatggacta tcatttcttc agatgataag aaaaaagcaa
     7441 ggcttaattt attgcgtttt atattgtcaa aagtggatta tgcggataaa aaaattggag
     7501 atttttcaaa gattgatcaa gatttagtaa gaagtggcga agaagaaatt cgtaaaatgg
     7561 aagcaaattt ggaaaaaata gacaataaaa aagcagatga aaaaataaag gatttggact
     7621 aaaactatgt tagaacgcgt taaaaattta agtgataaat actatgaaaa aattgtcaat
     7681 ttaagacatc aaattcacat gcaccctgaa cttgaatttg aagaggaaaa tacagcaaga
     7741 ttggtatgtg aaattttaga tgaatatggc attaagtatg aaaaaaatat agctaaaaca
     7801 ggaattttag caagcataga aggaaaaaaa ccaagcacta aaaaagctca atgcgtgctt
     7861 ttaagagcgg atatggatgc tttgcctgtg caagaggaaa caaatcttag ttatgcttca
     7921 aaaatcaatg gaaaaatgca tgcatgtggt cacgatggac acacagcagg gcttttagga
     7981 gcggttttga tcttaaatga attaagagat gaatttagtg gaacgattaa atttatgttt
     8041 cagcctgctg aagaaggaag cgggggtgct aagcctatga tagaagcagg catacttgaa
     8101 aatcctcatg tggatgcagt ttttggatgc catttatggg ggcctttgct tgaaaatact
     8161 gctcaaattg taagcggtga gatgatggcg ggggttgatg tttttgatct tgaatttata
     8221 gggaaaggcg gacacggagc gcaccctcat acgactatcg atcctatagt aatggcaagc
     8281 aaatttgtca gtgatgtaca atgtatcatt tcaaggcgct taagacctgt ggatgcaggg
     8341 gttatcacca tagggaaatt tcatgcaggg acaaccttta atgtgatccc acaaaatgct
     8401 atcttgcaag gaacggtgcg ttttttaagt gatgaaaatc aaaaactttt acaaagttct
     8461 atagaaaata cagccaaagc cgttgcttta gaatttgggg gtgattttaa gcttgattat
     8521 aaaagagaat atcctccttt aatcaatgat gaaaatgctg caaaaatagc tagaaaagct
     8581 tttggcaagg tattgggcga gcaaaatatc attagcgtag ctaagcctga tatgggagct
     8641 gaggattttg cttttttaac gcgtgaaaga atgggtgctt atgtttttgt aggtatttca
     8701 aaggatttga aaaatcctac cctgcaccat agttctactt tttgctggga agatgaaaat
     8761 ttaaaagtct taatgcaagg cgatagtatg atggctttag aatttttaaa ttcttaaaaa
     8821 tatgaattta aaaattcaca aaaaattcac tttgcataga tataattgcg agatttattt
     8881 tttaatttaa ggtttagaat gaaaaatagg gtcgttttga ttgtggtgat tttagcactt
     8941 tttggagtgg gcgcttattt catatttttt aatgataatg aaaaaatcac ctattttacc
     9001 caaaaggtta aaaaaataga tatttctcaa accatagaag cagtggggaa ggtttatgct
     9061 aaagatcaag ttgatgtggg tgctcaagta agtgggcaaa tcattaagct ttatgtggat
     9121 gtgggttcgc atgtaaaaca gggtgatttg atcgcgcaaa ttgataaaga taaacagcaa
     9181 aatgatttag atatcacaaa ggcgcagctt gaaagtgcca aggctaattt agaaagtaaa
     9241 aaagtcgccc ttgaaatcgc aagcaaacaa taccaaagag aacaaaagct ttatgcagct
     9301 aaggcaagtt cacttgaaaa tttagaaata caaaaaaata attattattc tttgaaagca
     9361 agtgttgcag aacttaatgc tcaagttatt cagcttgaaa ttactcttaa aaatgctaag
     9421 aaagatttag attatactac tataacagca cccattgatg gggttgtaat taacgtagct
     9481 gttgatgaag gacaaactgt aaatgctaat caaaacacac cgacaatagt tcgcattgca
     9541 aatttagatg aaatggaaat aaaaatggaa atagcagaag cagatgtgaa taagataaaa
     9601 ataggcacag agttggaatt ttccttactt aacgatccgc aaaaaaccta tcgtgcaagt
     9661 atagcgagta tcgatccagc cgatactgaa gtaagtgatt caagttctag ttattctagt
     9721 tcttcaagtt cgagttctaa tgctatttat tattatgcca agttttatgt acaaaataag
     9781 gataattttt tacgtattgg catgagtata caaaatgaaa ttgttattgc aagtgttaaa
     9841 gatgttattg ctgtgcctac ttatgcaatc aaaaatgatg caaaagggta ttatgttgaa
     9901 attttgcaaa atcaaaaagc ggtaaaaaaa tatgtaaaat ttggtattaa agattctatc
     9961 aatactcaaa ttttagaagg tgttgatgaa aatgaagagt tgataataag ttcaagtgct
    10021 gatggacttg taccagagat gaaattgaga ttttaatgct gtttttaaaa aatatttgta
    10081 aaaatatagg tgaaaatagt attttaaaaa atgttagttt aagtatagaa aaaggtgaat
    10141 ttgtagctat tattggacaa agtggtagcg gtaaaacttc tttgttaaat attataggga
    10201 ccttggatat gccaagtagt ggaagctaca tttttgaaaa ctatgaagtt actaagctaa
    10261 atagcgacga aaaagcaaga ctaaggcgtg aaaaaatagg ttttgtcttt caaagatata
    10321 atcttttgag tttactcagt gctgatagaa acgtttcatt gccggctgtt tatgcaggta
    10381 aaagcataca cgaaagaagt caaaaagcta aagaactttt agaaaatctc gaactagttc
    10441 ataagttgaa ttccaaacca aatgagttaa gtggcggaca gcaacaacgc gtttgtatag
    10501 caagagcttt gatgaatggc ggagaattga tacttgctga tgagccaaca ggagctttag
    10561 atagtaaaag tggaattatg gttcttgaga ttttgcaaaa attaaatgca caagggcata
    10621 ctattattct tgtaactcac gatccaaaaa ttgcagccca ggctaaaagg attatagaga
    10681 ttaaagacgg tgaaatttta agcgatacta aggatggaaa tttcaatcca aaaatcatct
    10741 taaaagcgat gccaaaagag aaaaaaacct ttaatttatt taaaaatcaa atttttgaat
    10801 gttttaaaat cgcttattct tccatacttg ctcataaact ccgttctatt ttaactatgc
    10861 ttggtattat aataggcgtt gcttctgtgg tttgcgttgt tgctttaggg cttggttctc
    10921 aagctaaggt tttagaatct attgcagggc ttggaacaaa tactattgaa atttatccag
    10981 gtagaggatt tggagatttg cgttcaggca gaacaagatt aaattttagt gatttacaga
    11041 cgcttagaac tttagaatat ttagatgctg ttgatgcaca ttcaagtact tcaggaattg
    11101 caacctatac aaacatttct ttaagtgcta gagctgaagg agtgggggta aataactttg
    11161 ctatagaggg tttaaaactt caagtgggta gaattttaaa taatgaagat atagaaacta
    11221 atgctaatgt agcggtgctt gattttaatg ctaagaaaaa tcttttccct cgccaaaaga
    11281 gtgaagatgt tttagggcgt gtagtgattt ttaattctca accctttaaa attataggag
    11341 ttttacaaaa agatacagaa aaacctatag aagataatgt agtgcgcctt tatatgcctt
    11401 atactacgct gatgaataag cttacaggcg atagaaattt gcgtgaaatt atagtaaaag
    11461 taaaggatga tgtgagttct actttggctg aaaatgctat cattagaatt ctagaaatca
    11521 aacgcgggca aagagatttt ttcactttta attctgatac ctttaagcaa gctatcacag
    11581 caaataaacg cacgactacc atacttacgg cttcggtggc ggtgattgct ttgattgttg
    11641 ggggtatagg cgtgatgaat atcatgcttg tttcggtgag tgaaagaaca agagaaatag
    11701 gaattcgtat ggcaataggt gctagaagag aagatatcat gatgcagttt ttaatcgaag
    11761 cagtgatgat atgttctatg ggtgcgattt tgggagtttt gctttctgtt tttgtgattt
    11821 ttggttttaa taccctaagc actgattttc ctatgatttt aaatgcgtat tctgtgcttt
    11881 taggtttgtt aagttcggtt ttaatcggag ttgtttttgg atttttccct gcaagaaatg
    11941 cagccaattt aaatcctatc agtgccttat caaaggaata aaatgaaaaa tttattgagt
    12001 attttgctag catttttttt aagcgcttgt ggtgtaaagc ttagcttacc taaagagcct
    12061 ataatgagcg aagagagctt taaagactta aatctcacct atgattggta taaagcttat
    12121 gataatgcta aattgaatga atttttaaat tttgttttgt taaataatag cgatattaat
    12181 atagctagaa atactttgct tacagcttta gcaagggctg atttgataga ttatgatttt
    12241 tatccgactt taagtgcaaa tttgggactt agtggagata agaatttaaa ttctggagcc
    12301 caaagtaaga aatttagcaa cggtttaaat ttaagctatg agcttgatat ctatggaaag
    12361 ataagagata gctcaagtgc gagcgaattt agcgcaaagg ctagtgccta cgatcttgaa
    12421 aatttaaaaa tcagtatgat caatacagcc ttaaataatg tttttgagct tgcttatttt
    12481 aatgatgcgg ataatttact taaagagtat ttagctaatt tagaacaaat gagagagctt
    12541 tatgcttata aattagagct tggaaaaatc gaagaacttg atttgcttaa tatcgagcaa
    12601 aatttattaa gagcaaggca agatttatta cgcaatgagc aaaatcgcaa tttacttata
    12661 aaaaatttac aagatttgat aggaaagcaa gagggctttg cgtatattga ttattttaaa
    12721 gctttaactc tttctgattt taagaattta aatcctaatt ttaatattcc tttagaagct
    12781 cttgtgtatc gtcctgatgt gcgttctaag ctcaataccc ttaaatccgc ttttaaagac
    12841 tatacttcgg tgcaaaaatc aatctttcca agcatttctt taggcggggc tttaaatggc
    12901 agcgataagc aatttgatga tagttttaaa tttgaagttt tgagtggcaa tataaaaatt
    12961 tccttacctt tcttagacta tggcagagta aagcaaaata tcaaaatttc gcagtttgat
    13021 tatgagagtg cgcttgttaa ttacgagcag agtttacaaa gtgctatgaa tgaatttgcc
    13081 ttaaattata aagactatca aagcaatact atgctacttc aaattttaaa agatactagc
    13141 tttaagcaag agttgatcac tcaagcttat tgggaaaaat ataatttggg taaaagtgaa
    13201 ttaaaagatt atttagatgc ttctaatact ttaaattccg ctaagcaaag tttgctagga
    13261 gctaggttta atcttcttaa aaccatcaat tcttattatc aaatcacagc tttaaactat
    13321 gatgaaagaa atttggaaat gccttaattt gtatcgcttt gtctgctaaa atatcaagta
    13381 gataaggctt ttttaattat atcgataaaa ttaaaaatca ataatgcaca tattttttta
    13441 aatcatcaag caatttttta gccattaatt catagccttt aatggttaaa tgtacatctt
    13501 gcaaagagag tttttgctct atccatttat tttttccacc gctatcttgc atgaattggt
    13561 gcatatcaaa aagaagggtt ttttcttctt tggctacctc ataaagtgct tgccttatag
    13621 caaaaaaatc aggagctagg gtgtattttt taccttgttt ttttaccaca gtaggaggag
    13681 aaacaagcat gataagggcg tttttattgt aagttttgag tgtgtgaatc caatctttta
    13741 aattcttttt aaatttgttt ttttcaaaac ctttaaaaag tgcgtcatta gaaccataag
    13801 caagtaagat taaatcatta gataggagtt ttaattcttg ctcgcttact tttttattcc
    13861 acgacatcca aagatcgctt tttgccccat tgatcgctat ggtatctaaa taagcattat
    13921 cctctttgct ggtgataaaa tatcctccta attgagcgtt tttttgtaag gcagaaattt
    13981 gcaaaggaaa aacaagttcg tattctttat atgaccattt attggctact gatcttagct
    14041 catagctttt gttttgagcg tctttaatgc taaaggcatt ggtgttattt ggagctttaa
    14101 agacaaaacc tactttaaaa tttttcttgt ctaaattagt atcaagggtg atttttgcac
    14161 ccttttcttt agccttagct attatcccac ctaaaggaaa atcaatacct gcggtgtctg
    14221 tatttcttga atttaaaatt tcataatctt tataagaata atcaagattt aaattttgtt
    14281 gatatttggg ttgcaaaggg taggcaaagc ctatggaatt tgattttatc aaatatcctc
    14341 taataacacg cggaaaaaaa tctgctgccg tgtgagaatc tccataaatt ctaataccta
    14401 cgtttttatg ctctttaagt ttttgctcca aaagctttaa gtcttttttg gaagcataat
    14461 tgcttaaagc acttttgttt ttggtttggc ttagaatttc atctatggta tggtttgtgt
    14521 tatttgcgta taaattgatt gaaaatataa gaattaataa tatagcttta aattgcttaa
    14581 tttgcatttt cttccttgat tgttatatgt tgaagcaaga gttttgacat ctcttttgct
    14641 ccgtttgagg taaaatgaat tccatcgtct gttctcattt ttatactttt gttgttttca
    14701 tttttaatat aggttgaaaa ttcatcatta acgctaaaaa atagttttgt attgataaaa
    14761 atttgtttat ttttgagaat ttcttcgcta taaattttgt ttagaatttg tattttttca
    14821 ttgagttcat tttttttaac aggaggaatt tcaaaccaaa gaatttttgc atgatgttgt
    14881 ttagctatat tgatgatttc atttactcta taggtgtaga tgtcaatcca gctatctgaa
    14941 ccaaagcggt gataaattcc accttttttg atatcccaag gatcatttgc ccctagtaag
    15001 acaactagat atttaatgtt gggatttttt gcaaaagctt ctttggttgc ttttgcccaa
    15061 tcaaaataag atttgtaaga aagtcctgta ttttgcttgc taagatcatt agcttttaaa
    15121 cctagatcaa ttaaatcacg attgagtgca attgcaacgc cttgcattaa agaatcgcct
    15181 ataaataaaa attcatcacc tttatgaact tctaatttgg tattgtcaat aaaactgaca
    15241 ttttcgtctt ctgtttgctg tatatcttca atagtggtgt ttttatcgat aaaatcatta
    15301 cttgcattaa gttcatccat atcttcttga accatgatat tttcttctat attttgaggt
    15361 agaggctcat tacttagtat tgcacggatt tgttctagtt tatttttaaa accattggcc
    15421 tcttgtaaaa tatcgttttt aggataaaat gcaaagtgat atttttgctc gatataagaa
    15481 aaaatgcttt gattcatcac aaggcaaaca agtataaaca ctataattaa aataaagaaa
    15541 aatctaataa ttttcattta aaaactcgaa taaataaaat caggaatgcc atttggcata
    15601 aaagcaaaca ctaaaagcaa aataaaagtg attacaaacg gcttgagtaa aaacggcgta
    15661 agatttaaaa tccttacgca atattctcta aaattaacaa ataaaggata aatcataaaa
    15721 agcacagcaa agcttacaag catataaata tcgttatagc taggaatttg gaagaaatta
    15781 ttataacaag ctttgaagta ttctaaggca tcttctaaat ttttattata ataaaagaaa
    15841 atccaagtaa aacatacaaa ttgaaaggtt aaaaatcttc ctaaagctgg aattttttga
    15901 aggctgaatt tgcttaaagc aagtaaatgg ataaatacaa tacccaagcc atgcaataaa
    15961 ccccaaaccc caaaagccaa agtacttcca tgccataagc ccgaaagaat aaaagcgatg
    16021 agtatattgg ctatggtgcg aggcattcct tttctgttgc ctcctaaagg aatatagata
    16081 taatctctta tgaaagttga aaggctgatg tgccatctag cccaaaattc tttaagattt
    16141 ttagctagat aaggcatatt aaaattcggt ggcaaggtaa aacctaacat taaagcaaaa
    16201 gcacaaacta gatctacata tccactaaaa tcgcaatata tttgcaccgc ataagcgtaa
    16261 attgcactta gaagttgtat aaaattataa gattgtggaa aatctaaaat atttttggca
    16321 taaattccta agtaattagc aataagaact tttttcacta taccaaaaat aagcaaaatg
    16381 atgatcaaat ttgcatgttt aaattcgcgt ttttgataag cttgttcgaa aaaaaacgca
    16441 ctacgcataa tcggccctgc aagtagggta gggaaaaatg ataaaaaggt tgctaaattt
    16501 aaaaagcttt ctaaatgatg ttttttgtat acatctacaa ggtaagtaat agaagcaaag
    16561 gtgtaaaaac taatgcctat aggcaagata agttcgatat ttaaaaaatc aagccccaaa
    16621 aagcttagca cttgatcaag acttcctttg atatttggaa aatatttgaa aaaacataaa
    16681 tttaatatta taaaagttat acaagtagca aaaatatatc gttttcgacg cacaaagata
    16741 agcaaggcaa aaaaatgtat aaaaaaagtg taaataaata aaattaaagc aaaataagga
    16801 ttaatcagta tataaataag atatgaaaaa gccaagatta aaatattttg tattttataa
    16861 ttatctttaa atgcccaata tatggcaaaa aatacaatca ttaaaatact aaattctaaa
    16921 gaaaaataag tcatacgcta cctaagatga aattatattt ttgccttttt caaggcaaaa
    16981 atattatttt ttagacaaag ctaaattttt gatatattga tcagctagat ataagccgtt
    17041 tccattgtca ctgatgagtt tgattttatc tactatacca cggaaaagtg cttcttcttc
    17101 gtgctgttcg cttacatacc attgaagaaa attaaaagta gaataatctt tattacctag
    17161 catgtgctct acaagatcgt tgattgattt tgtaatgctt tgttcatgct cgtaagtttt
    17221 ttcaaaaaca tcaagtaaag atttgaaatt ttgttcaggt tgcttcactt ctttaagctc
    17281 tacatgtgaa tctgtttcat taagataagt tataagtttt cttgcgtgtt cgctttcttc
    17341 gcttgcgtgt tgaaaaagaa agagcccagc tccatcaaga ctattttcat agcaccaaga
    17401 actcatactt agatataaat tagctgcata catttctttg ttgatttgct cgtttaataa
    17461 atcaactact ttttttgaaa gcattctatc tccttatttt tatttttaga atgtttttaa
    17521 aatgatatat tgattttttt aaaacaagct aaatttttaa aggattgaag ttaaaatata
    17581 taaaataaaa ataaaatgtt tctaaatgaa attaagcttt atattttatt acgagtatag
    17641 attttatttt aaggctgaaa atctgcaaag atttttaggt gggcgtgcct ttagaggttt
    17701 caaaaggact aagtcctttg tcgcaagacg gaatttattt ccgtcgcgaa gtaaaaaatg
    17761 tttccaaaat gtttccaact ttttctaaac ttccgttact tttttaaaag taaggagaaa
    17821 aaatgaaaaa aattctagct ttaagtgttg caagttttgc tttagcgggt gctttaaatg
    17881 cggctgattt aaaaatcgca ggttcatcaa ccgtgtatcc atttacttct tttgtagctg
    17941 aagagtatgc agcgattcac aatacaaaaa ctcctattgt agagagttta ggaacagggg
    18001 gtggatttaa agtattttgc gagggcataa ctgacatttc taatgcttca agagcgatga
    18061 aatttagcga atttgaaact tgcaaaaaag cgggagttac tgatatagta gggattatgg
    18121 taggttatga tggtatagtt ttagcgcaaa ataaagccaa cgcaccttta aatatcacta
    18181 aaaaagaact tttcttagca ttagcaaaag aaattccaca aaatggaaaa cttataccaa
    18241 atccttatac aaactggaat caaatcaata aaaatttacc taatcgtaaa atcagcgttt
    18301 atggtcctcc atcaagctca ggtacaagag atactgtaga agaacttgta atgagtgata
    18361 tttctaaaaa aattcctgaa tacaaaggcg agtataaaac catacgccaa gatggagctt
    18421 atattccaag tggtgaaaat gataatctaa tcgtttcaaa acttactatc gataaagatg
    18481 cttttgggct ttttggttat ggatttttag taagcaatgt ggataaaatc aatgctgcta
    18541 atattgatgg tgtaaaagca gatgaaaaaa atattgctga tggaaaatac gatcttgcaa
    18601 gaagtttatt tatctatatc aatgcaaaga aaaatcctaa agaagccttt gaatttgcaa
    18661 aaatttatat gagtgatgat ttagcaaaaa gcggaggcga acttgagaaa atagggcttg
    18721 ttcctttaaa tgacgagctt ttaaaagctt ctcaaaaaca tatagaagat agaaaaatct
    18781 taagcgatga gcttgtaaaa gctggaaaag tattttaagg aaaaactttg ctaaaagaaa
    18841 aaataattaa atttatactt ttcttatgcg cttttgttag cgtgctggta agctttgcca
    18901 tcatgctaac gattctaatc gaagctttaa aattctttca aaaagaaagc ataagtactt
    18961 ttttattttc aagcgaatgg gcagctgatg cagcttttat gaatgcagat ggcacgagta
    19021 agcaaggggt ttttggtgca gtgtcgcttt tttggggaac tttttatatc tctttaatcg
    19081 ctatgctaac agctctacct ttgggggtaa tgtgtgctat atatttaggt gtttttgccg
    19141 gtaaaaaatc taaaaattac ttaaaaccta ttttagaaat cattgcaggg attcctactg
    19201 ttgtttttgg attttttgcg gctatagttg tagcgccttt tatagtgtgg tttttttctt
    19261 tatttggcat acaagcaagc tttcaaagtg ctttaggcgc gggatttatc atggggatca
    19321 tgatagtgcc tatagtggct tctttgtcgc aagattgtat cgaagcagtg agtgaaaaaa
    19381 ggattaatgg cgcttatgct ttaggtatga caaaaaaaga agtggttttt gccgtgattt
    19441 tacctgaggc tattcctggt atagttgcag cttgtctttt aggactttca agagccttag
    19501 gcgaaactat gatagtggtg atggcagctt ctttgcgtcc aaatttaact ttaaattttt
    19561 tagaagatat gacaacggtt acggttaaga tcgtagaagc attaagtggg gatcaagctt
    19621 ttgatagttc tttagcttta agcgcctttt ctttaggttt ggtgcttttt gtcatcactt
    19681 taatcatcaa tatgtttagc gtttatctta tcaaccgctt tcacaaaagg aaaaatttat
    19741 gaaaaaactt tttaaaaaaa gacaaaaagc ttcaaagtct tttaaaagac tttgtaaaat
    19801 ggggctttat attaatttaa tttttctttg tatcttttta ggaagtgtgg cttatcttgg
    19861 atttcctgct tttaagcaaa cctatatttt tgtagaggct aatagaaatt ctcctgctta
    19921 tgatctttta tctcgtgctg agcaaagaaa aataagaaca gggcaaatca ctgaaaaaac
    19981 ttggcttttg gcaaattcag aagtagatca atatatgaag caaaaatata atcgccttag
    20041 tgaaaaacaa agaattttag tcgatgatct tgtgcaaaaa ggcgagatag agcttaaatt
    20101 taatagcaat ttctttttaa atggggactc aaaatctcct gaaaattcag gaattttatc
    20161 ttcagttgta gggactttgc ttgttatgct tgtttgtatg gttgtgagtg ttcctatagg
    20221 cgttgcagcg gcaatttact tagaagaatt tgcgccacaa aatattctta cacattttat
    20281 agaagtgtgt attaacaacc ttgcaagtat tcctagtatc ttgtttggac ttttaggact
    20341 tggagtgttt atcaatcttt ttggaatgcc tcgctcaagt gctttagtgg gtgggcttac
    20401 tttggcgatc atgagtttac ctattatcat tgtttcaacc aaagcagctt taaaaagtgt
    20461 ggatatcaat atgaaaaatg ccgcttatgc cttaggcatg acaaaggttc aaatggtaaa
    20521 aggcattatg ctgcctttag ctatgcctat gattttaaca ggttctattt tgactttagc
    20581 aggggctata ggtgagactg cacctttgat gattatcggt atgatagcat ttatccctga
    20641 tgtagctagt tcgatttttg atccaactag cgttttacct gctcaaattt actcatggtc
    20701 ggctatgcca gagcgtgcat ttttagaaag aacagcagcg ggtattattg tgcttttagg
    20761 acttttagtc gtgttaaatc ttagtgcaat attattaaga aaatattttc aaggaaaatt
    20821 aaagtgatag caaaaacaac aaatttaaat ttattttatg gaaaaaaaca agctttattt
    20881 gatatcaata tgcaaataga gcaaaacaaa attactgcac tcatcggtgc ttcaggatgt
    20941 ggtaaatcca cttttttgcg ttgttttaat agaatgaatg ataaaattgc aaaaatcgat
    21001 ggtttagtgg aaattgaagg aaaagatgtt aaaaatcaag atgtagtagc cttgcgtaaa
    21061 aatgtaggca tggtttttca acaacctaat gtttttgtaa aaagcattta tgaaaacatc
    21121 tcttatgcac caaaacttca tggtatgatt aaaaacaaag atgaagaaga agctttggtg
    21181 gtggattgct tgcaaaaagt ggggcttttt gaagaggtta aagataaatt aaagcaaaat
    21241 gctctagctc tttcaggcgg acaacaacaa cgcctttgta tcgcaagagc tttagcaata
    21301 aaacctaaac ttttgctttt agatgagcca acttctgcac ttgatcctat aagttcaggc
    21361 gtgattgaag agcttttaaa agaattaagt cataatcttt ccatgattat ggttacgcat
    21421 aatatgcaac aaggcaaacg cgtagctgat tatacagcat tttttcatct tggagagctt
    21481 atagaatttg gtgaaagtaa agaatttttt gaaaatccaa aacaagaaaa aactaaggct
    21541 tatttaagcg gtgcttttgg ctgagattta tacaaaaaca agtatctttg tattaaaatt
    21601 atatccttaa aaaagaattt tataaggata tagttttgtt tgaaacactt ttaaaactaa
    21661 gcgaagaacc tttaaaaagc aagattaagg atttgtattt ttctaaattt aattatgtag
    21721 gtgctaagat tgatttttgt atcactcaaa atttaggact tttaggtgaa attaatttgc
    21781 tttgggctga agccaaacaa ggaaaaagtg agcttaaaaa atcttttgta cagcttgtgc
    21841 ttaccatagg aaaatataaa ttttatacag agcaaactcc aaatttactt tgtgcttttg
    21901 atggagaaaa gatagctttt ttaccctttg cttgtttgca agaaattttt tatcaaagcg
    21961 atataaactt tagtgtaacg cctagcaatc atacaagtga gcaattttta aaacttctaa
    22021 aagaattaga tagtatttta aatacagcgc aaatttttta ttatgaaaaa aatgatgaag
    22081 aattaaaaac tttcataaaa gaaaatctta caagcgaaaa tataagtaaa attaaaatcg
    22141 ataaaaacaa ttttgtaagt atttatcata aatggaataa aatggttaaa gatactatca
    22201 gtattgattg gaatttggct aaaaaaagcg ggattataga tgctgatttt tatttggctg
    22261 atttgctttc aagtgaaaat gaaactatca gtcaaaattt atttgccatt cttaaaaaag
    22321 attattatga gtttaataaa acaaaaagtg atttaggctc tatcattaac gaacgcactt
    22381 cttttaaaga taatcaaaaa gctcatcatg aattttgggc gatttacgag cgtcctccaa
    22441 gggaagaatt ttgggattat attataaaac gcagagattt gcttgtagat caagatgtaa
    22501 gagagcgaaa aggagcattt tttaccccaa gaatttgggt ggataaggct tgcgagtatc
    22561 tttctaaaac ttttggggag gattatgaag aggggtatta tatatgggat ttagcgggtg
    22621 gaacaggaaa tttactagca aattttacaa ataaaaaaaa tatcttttgt tctactcttg
    22681 ataaagctga tatagatgtg atacatgagc gtataaaaaa tggtgcgaat ttgtttgaaa
    22741 atcatgtttt tcaatttgat tttttaaatg atgaattctt tgatgaagtg gatgataagg
    22801 gtaaaattat ccaaaaatca aaattacctt taaatttaca agagatttta aaggatgaaa
    22861 ataaacgcaa aaaattaata atctttatca acccacctta tgcggaggct acaagcgcta
    22921 cacaggttac aaatacagga aaaaataaag ataaagtagc aagagaaaat aaaatttgtg
    22981 aaaaatataa agacatttta ggaaaagcga acaatgagct ttttgcacaa ttttttatca
    23041 gaatttattg tgagttagaa gattgtttaa tggctagttt ttctaaatta aaatatgtaa
    23101 attctaccaa ttttataaaa tttagagaga aatttaaggc taaattttta aaaggcttta
    23161 tggtgcctgc taataccttt gataatgtaa aaggaaattt tcctatagga tttttgatat
    23221 gggatatgag taaaaaagaa gaaattaaaa aaataaaact tgatacattt aataaaaatg
    23281 ggagtttttt aggaataaaa actttttata atgatcaaaa agaaagtatt aataaatgga
    23341 tcaagatttt tgatgataaa aaatcacaag agaaatttgg atttatggga aacccaagcc
    23401 cagattttca acataatagc caattatatc tttctcttaa caaaggaata gagcatttta
    23461 atttttacat attctcgcta aaaaacctgt taaatggtgc tgtatatttc tctgttcgtc
    23521 atgctataaa tgctacttgg ataaatgata gagatcagtt tttatatcct aatgatttat
    23581 ataaaaatga tgatgagttt aaaagtgatt gtttagcttt tatgcttttt catggacaaa
    23641 atcgcataag tgcaaaagaa gggataaatc atttcatacc ttttagtgaa aaagaactag
    23701 gtatcacaaa agaagctttt gagagtgatt ttatgtataa atttataaag ggcaagataa
    23761 aagatgaaaa ctcacttttt ggtgatgagt tagtaaagat agaattcagt cttgaagctc
    23821 aagagctttt aaaagcagga aaagaacttt ttaagtatta tcacacacat agcgaggata
    23881 aaggctatct tgtcaatgct tcgttttatg atatcaaaga attttttcaa ggtagggatg
    23941 aaaaaggtag gatgaatcgt cctagccaag caaaagacga gcattataaa attttactaa
    24001 gtgatttaaa cacagcttta aatgctttag ctaaaaagtt agtgccaaaa atttatgaat
    24061 atggcttttt aaaagagtaa tcatggcaaa aaaacaactc tccttaacaa gacttagttt
    24121 tcctatattt tgggatttgc tttctaagta tttaactgtg attatcaata ccgctatggt
    24181 gtcgcattat tctaattttc ttgtgggtgc tatgggagct ggaaatcaaa ttttagatct
    24241 ttttatcact attttttcat ttttaagcgt gggttgtagc gtggtgatcg cacaagcaat
    24301 cggtgcaaaa gatcatgttt tagcaagaaa agtgattcat caaagtttgt tcttaaatgc
    24361 acttttaggc tttgtatgcg gtgtgcttat tttatggcat ggggagtatt tgctttatct
    24421 tttaaaaatt ccacaagaat tgctcaaaga tagcgaaatt tacttacata tgcttgcaat
    24481 ttgtttgttt tttgatgcca taggaattgt tttagcggct attgtaaggg tttataatat
    24541 ggcttattgg gtcatgctta taggcttttt gatggatata gtggtgattt gtggaaatta
    24601 ttatgttttg cattatacaa aatcagaact ttttggagta gggcttagca atatttttgc
    24661 gcgtatcgtt gctatagtgg ctttacttgt gatacttttt tacaaactta aaattcatct
    24721 taaaatcaaa gaaatgataa aacttgaaaa agaggtatta aaaaaggttt taaatatagg
    24781 aggattttca gcaggggaaa atcttttatg gatagtccaa tacactatag cctttgcttt
    24841 tgtagcaagc ttaggtgagg cgagtttgag tgtgcaaacg atttattttc aaatttcaat
    24901 gcttatcatg cttataggac aagctacgag catagctaat gaaatcatag taggtaaatt
    24961 agtcggtgct agatatgaaa atatagctta taaacacgct tggcgtgctt tatattttag
    25021 tgtaatagcg agtgctttag tggcactttt gaattatctt tgtcaagatt ttactatgca
    25081 aattttagga cttaaagaag agttaaaaaa tttaatgata cctttatttg ctctttcaat
    25141 ctttcttgaa atttcacgaa cttttaatat agttatggta aattccttgc gcgcaagtgg
    25201 cgatgctaag tttccatttt ttagcggact tgtttttatg atgggggtat ctttgcctgt
    25261 gggttatgtg ctttgttttc attttaatct tggaatttta ggggtttgga taggattttg
    25321 tgcggatgag tttttgcgtg gaatggtaaa ttcatacaga tggaaaagca aaaaatggca
    25381 aggcaaagct ctagtttaaa atcatttatt tataaagatg agtgctattt ttattctaaa
    25441 aaacgcataa aaactttaag attaaggctc aatgaaaggg gtgaatttgt tcttagcatt
    25501 ccttattttt gcacctttaa aagtgtttat gagtttttag ataaatcaag ttcttggatg
    25561 aatgaggcaa aaaaaagatt tgaaaaaaaa gccttaaagg atgatgagtt aattttttta
    25621 gctaaaaaat ataaaattat ttttgatgaa aatgtcaaaa aagcttattt tgataaagat
    25681 aaaataattt gtcaaaataa agcaaaatta gatttatttt taagacaaaa tgctaaaaag
    25741 atttttactt tttatcttaa aaaatggagt aaaaaaacag gtttatttta catgcattta
    25801 agcattaaaa atatgaaaac gcgttggggt tcatgtaatc acaataaagc ttatgttaat
    25861 ttaaatttaa aactcattca aaagagttta aatgctattg aatatgtggt tttgcatgaa
    25921 atatgccact taaaattccc caatcacagc aaagaatttt acgattttat tgagtatttt
    25981 atgagtgatt ttaggcaaag agagaaagaa tttttaagtt aaaaatgtta tatttatagt
    26041 ttatttttca aaaaaggcat aatatgactt tggattttga ttttatttat aatgcggata
    26101 atgatatttt tgaatattta ttgcgttttt atgcgaaaaa ttacaattat atccttagta
    26161 aagaagaaaa tacttatcat ttttctatcg atgcagatga agaaaattta aagacttttt
    26221 gcgattcttt gaatttcatg agtcatagcg tttttttgaa aaaatttgat gtaaaagcgg
    26281 ggcatggttt tagcccttgt ataccagaag ataaagaatt ttcgaaattt tcttatatta
    26341 cgcatttaaa ttctaatgct tatcaagaaa aaaaactttt aaacagaaat gaatggggtg
    26401 tgttttgtga gtgtgaattt tcaagcaatt tatcagaatt tgaaaaaatc aatgaagaaa
    26461 atttcaatac ttttttaaat cttgcctttg atttgttaag tcaagaaaaa aagatttatt
    26521 tgaaagataa aaatggcatt tatgaatttt ctttgtttaa gaacgaattt ataggagatt
    26581 ttttacttcc ttgtgatatt aaggctataa attcagtttt tgtttgttca aatgaaaatt
    26641 taaaacttct tgcaagttta gaaaaacctt tgatgaagct aaggcttaat gctatgttta
    26701 gaaaaaatca caatcttgat tttaatgatt ttaaaatcag acttgctagg gatttgtttt
    26761 gttttgcttt aggtttaaaa ctttttgaaa atgaatataa atttttaagc gtaaaaaaga
    26821 tagaagaata tcaaaaagat ttttatatca gtgctttaga tgagcaagtg gtggttttgg
    26881 aaggctttga atttatcaat gctaaggcaa gagagcttat tttttctaaa gaagataaaa
    26941 atatggcaag aatttcttat cttgtaagcc gttataaaga aaaggctttt attttagagc
    27001 taagtaaaga tgatgaagat attttgctta tcaacaaaga gcttaatttg cttaaacttt
    27061 gcttaccaaa acacagcaaa gagctttatg aagagataca aaaagatgaa atcggcgcaa
    27121 gacttttaga aaattttgcc aaagaatttc cgcttttaaa tgagagtttt gaacttaaaa
    27181 acaattttta ttctttactt tgcttggtgg gtagggtgtt aaatttggat gaaaatttac
    27241 acaaggcagg agaaaaactt ttaaaaatcg cagacgaatc taaaatgcct cgtggggtga
    27301 agattgatta tcgtttgaaa gaagataaaa gttttgatta tactaggacc ttaagatcta
    27361 ctatgagctt tatgctagca ggggtagata gtgcaaatat cgcttatgga gctgtggaaa
    27421 gcttggctta ttttttacgc gatacttatg atgatttaag agaaaaaaaa cagagtgaaa
    27481 tggcgctaat tagtggatct ttgtttgagc ataaagcctt gcttagaaat actttaaaac
    27541 atcttaaaaa ttgtcagtta agcgatgtgc cacttaggat ataaacttca aatttcagga
    27601 cttgttcaag gcgtaggttt tcgtcctctt gtctttgagc ttgcctctga attaggactt
    27661 catggagaag taaaaaatga tggttttggg gtagaaatta tccttgcttg taccaaagaa
    27721 gaatgcgaga attttatcta taagctcaaa gagaagctcc cacctttagc aaggatagat
    27781 agtattgata tcacagagca aacgactaca aattataccc attttagcat aggtacttct
    27841 ttgcaaaatg caaaaactac tccaatgctt agtgattttg cactttgtaa agagtgtaaa
    27901 aaagaatttt ttgatgaaaa aaatccgcgt tttttatatc cttttatcac ttgtacgcat
    27961 tgtgggccaa gatttagcat cattaaaaat ctcccttatg ataggtgcaa taccacaatg
    28021 gaagcattga aaatgtgtga gttttgcaaa agtgagtatg aagatcctaa aaataggcgt
    28081 tttcatgccc agcctataag ttgccctcag tgtaaaatcg atgttttttt aaaaaataaa
    28141 aagggtgaaa ttctagctca agatgatgaa gcttttaaga cctgtgctaa gcttttaaag
    28201 caaggaaaaa ttttagctat caaaggcatg gggggatttc atttgatgtg cgatgccttt
    28261 aatcttgaag ctataaagga gctaagactt agaaaaaacc gccccaaaaa accctttgcc
    28321 ttaatgtgta gagatatgag cgatgctaaa gagctttgtt ttgtggatga agaggaagaa
    28381 aaactgcttg gttctatttt agctcctatc gtgattttaa aagctaaaaa agccttttct
    28441 ttaatcgctc ctgatgtgga taaactcggc attatgttag cctatactcc actgcatctt
    28501 ttacttttta gatattttga tggggtttta gtagcaacaa gtgcaaattt aagtggtgaa
    28561 agtattatta aagatgagga taatttgctt aaaaagcttg gcaatgtttt tgatttttat
    28621 ctagactatg caagagaaat tcacaatcca agcgatgata gcattgctca agttgtaaat
    28681 ggaaaaacta tgtttttacg cacttcaaga ggtttaaatc cgacttattt ggaaattaaa
    28741 agcgataaaa aaggagtttt tttagctttg ggttcggagt taaaaaatga atttgtgatt
    28801 ttttatgaaa ataaactttt gatttctcct tatataggag atttaaaaag tgttgatgtg
    28861 gacgagagat ttttttcttt gcttgatttt tttaaacaaa gttatgattt gagttttgat
    28921 caaatacttt gcgataagca tcctaatttt agctatacaa aagaatttta caatacttat
    28981 aaaattcagc accattacgc acatttttgc gcactttatt ttgaatacga aaaagaattt
    29041 aaaaaagatg aaaaagcttt gggttttatc tttgatggca cgggttatgg tgatgatgga
    29101 aaaatttggg gtggcgagat ttttataggg aatttaaaac aatacgaaag aatcgcgcat
    29161 tttgaaaatt ttacccttat caatagcgat ataaaaaata tacaaaattt agctttgagc
    29221 ttgatttggc attatgattt agaagatgag gctaagatat ttttatctaa aattccaaaa
    29281 ataaaacttg aaaatcttaa aaaaattcac acccactcta cacttcaaac aagttcttta
    29341 gggcgcatta tcgatgcttt tgggagtata gtttttaata tggaaaaaat ttcttacgaa
    29401 gcacaaatcg ggctgatgtg tgaagcattt tatgatgaaa atttagactt ttcttacgag
    29461 cttttttcta aggatggaga aatcaacttt aaagaactca ttgagggtgc tttaaaggat
    29521 gaaaaaagca aggctattac gggtatgttt aatgctttgg caaatttgat tataactttt
    29581 agcaaaactt atgatttaaa agtgctttta ggaggtggag tttttcaaaa taaaacctta
    29641 cttcaaattt taaaagctaa aaattttgac tttctcgtat ctttaaaata cccttgcaat
    29701 gatagctcca tagccctagg acaaatggtg cattttttaa aaaaagactg ataatatctt
    29761 taaaactcat taaaatttaa tacttttaaa gataaaatca aagaaaaact ttcaaaagga
    29821 acataatatg tgtaaggatt gtggctgttc aataaattcg gctcatactc atgagcattc
    29881 tcatcatcat gatcatcatc atgaaaatcc aagcctaaaa gaaagcaaaa ccatagaagt
    29941 aatttctaaa attttaagta aaaatgatga agaagctaag cataatagag cgcattttaa
    30001 tgaagctaac acgctttgta tcaatttaat gagttctcca ggtagtggaa aaaccacgct
    30061 tttagaaagc acgattaagg ctttgaaaaa tgaacttaaa attgctgtga ttgaagggga
    30121 tttagaaacc aataatgacg ctctaagggt aaaaaatgcc ggagctttgg cgtatcaaat
    30181 cactacaggg caaagctgtc atttggacgc ttttatggtg catgaggctt tgcatcattt
    30241 agccattgat gatgtggatt tgctttttat agaaaatgtt ggaaatttgg tttgtcctgc
    30301 aagttatgat ttaggagagc atttaaatgt ggttttgctt tctgttaccg aaggaagtga
    30361 taaaccgcaa aaatatcctg tgatgtttaa aaaggctgat atagttttaa tcacaaaggc
    30421 agatttagct catcattttg attttgatgt taaagaggcg actaggttga ttaaagaatt
    30481 aaatcctaga gcagatatta tcacccttga tgcaaaaaat ggcaccaata tggagctttg
    30541 gtataaggtg cttaaactta aaaaggagct tttttaatgt gtttgtctat accttctgaa
    30601 attttagaaa tcgatgagtt aaacaatgct ttagtacaaa ctttaggcgt gaaaagaaaa
    30661 gttaatttgg atttgattga tgaaccttta aaacaaggcg attatgtatt aatccatgta
    30721 ggcgttgcta tggaaaaaat cgacaaagaa gctgcactag aaagcattaa aacctatcaa
    30781 gaaatagtag aaaaaatgaa tagtggagag ataaaaagtg atgaaggaga tttgggttta
    30841 aatgaatttc atcgatgaat ttagagataa agaaagcatt ttagctttaa aaaaactcat
    30901 agaacaagaa cttaaaaatc ctattaatat catggaaatt tgcggtgggc atacgcatag
    30961 tatcatgaaa tatgctttgc cttctatttt gccaaaggaa attaacttta tccatgggcc
    31021 aggatgtcct gtttgtgtta tgccaagagt tcgcattgat acagctatca agttagcctc
    31081 catgaaagat acgatttttt gtactttagg ggatctttta agggtgcctg gaagtgaaat
    31141 ttctttactg gatttaagag ctaaaggggc tgatgttaga gcgctttatt ctccgcttga
    31201 ggttttggaa attgctaagc aaaatttaaa caaaaatatc atcttttttg ctataggttt
    31261 tgaaactact acgcctatga gtgctttact tcttcaaaag gttatagaag aaaaaataaa
    31321 taatgtcttt tttcatatca atcatatcac agttccagca cctgtagaag cgatcatgaa
    31381 tgatgaaaat gtaaaaatca atgctttttt aggtccttct catgtgagtg tgataacagg
    31441 ttatggtatt tatgagcctt tagcagcaaa atttaaaacc cctatagcgg tgagtggttt
    31501 tgagccagtt gatattttag aaagtgtgtt aaatatcata aaacaaagca atgaaggcac
    31561 ttttaaagtg tataatcaat acaaaagagc cgtaagcaaa gaaggcaatg ttaaagcaca
    31621 aaatttagta aaaaaatact ttagggtgtg tgattttgaa tttcgtggct taggacttat
    31681 taaagatgga ggcttggagt taaaagaaga atttagcgct tacgatgcga gtaaaaaatt
    31741 tgattgtacg gtgcaaagta aaaatgaaag caaagcctgt atttgtgggc aaattttaag
    31801 aggtttggcc aagccttatg attgtaaagt ttttggcaag gcttgtacgc caagaagtcc
    31861 tataggaagt tgtatggttt ctggcgaggg tgcttgtgcg gcgtattata aatactcaaa
    31921 ggtgaatgca tgaaaaatat ttccttagcc cacggaggcg gtggagaaga gatgaatgag
    31981 cttttaacta agctttttga gatctttgat aatgaaattt taaacgcaaa taatgatgca
    32041 gcgattttgg gaaatttggc tttaagcaca gattcttttg tcttaagtcc tatcttttta
    32101 gatgatgagg taaatatagg taagctttgc gtttgcggtt ctgttaatga tgttttaatg
    32161 gtaggggcaa aaccaaagta ccttagccta ggacttattt tagaagaggg ttttgagcta
    32221 gaaaaattag aacgtatttt aaaaagcatt aaagaagaat gtgaaaaatg tggagttatg
    32281 ttagtttgtg gcgatactaa agttgttcct aagggcaaag cagatgaaat ttatatcaac
    32341 actactgctt taggtgaaat catcgctaaa aaagagagta aaaatatcaa agcagggctt
    32401 agcatacttc tttcaggcga tataggaagg catggagcca gtgttttaat caaaagaaat
    32461 gagttagaag ctgatgttaa aagtgattgt aaggctttgg ataaggaagt tttggagctt
    32521 ttggaaaagg atataaaagt tgtagctatg cgtgatgcaa cgcgtggagg gcttagtgca
    32581 gttttaaacg aatgggcaaa gcaaagcggg aatgatcttt tgatttttga agaaaagata
    32641 aaaatacaag atgaagtttt agggctttgt gaactttttg gctatgaggc ttttgagctt
    32701 gcaaatgaag gcacttttat actttgtgtt gaaaaagaag atgagttaaa ggctttggaa
    32761 attttaaaaa aatacaatgt aaatgctagt atcataggag aagttttaga agagaaaaaa
    32821 gctcgtgtga ttttagaaaa tgcttatgga gctaaacgct ttttagaagc tcctaagggc
    32881 gaacttttac cgagaatttg ctaatgcacg agcttagtat agtagagtct ttaatcgaac
    32941 tttgcgaaga aaatgctttt gctcataaag ctaaaagtgt gcaagagatt tatgtaaaaa
    33001 taggtcgttt aagcggtata gaagtagagc tttttaggcg ttgttttgaa acttttaggg
    33061 aaaattcaga gctttgcaaa aatgcaaagc tttttataga gcttgcaccg cttgaaattt
    33121 tgtgtttaaa atgtgaccaa acaagtgttt tagaagaaaa tgtttttaag tgccctaaat
    33181 gcgaaagtat agagtataaa atctcacaag gtgaggattt gcacctcatg cgacttgtga
    33241 tggagtgagt caaaaaattg attttttgca aaacgataat ctcttaaata aagaatttta
    33301 gggaaatttt acaagaaatt taaagagcaa aataagaaat gagattgtca ataatctaac
    33361 tttttataat ccttgcaagc tttagcaaag tggcgattag aaattctttt ttagcaagtt
    33421 tggaattggt tttaagttcg tattcacttt taagcaaaag gttaaaaatt tctttataat
    33481 gtttgatttt taagctaaaa gcttgttcgt ttaaattttg tgctacttga ggcggaggag
    33541 tataacctaa gagttcttta aaatccactt tcccataaat tttagcataa agagcaattt
    33601 taaaaagacg gtaaaaggca gaacttaaag agttaatcaa agcaatttca ttaaaattat
    33661 ccaaaatctt ctcaagctca tttttaaaat cggctctttt taaaatcttt tcaaagaagc
    33721 tttcaaaact tcctatgttt aagctataac aatattgctc tatggttttt tcatccactc
    33781 ttaagccgct gaatttatta agctcgctag cagcaagata caaattctca tcaaagcttg
    33841 taaaaagggt aaataaagca ttttgagtga tttctatatg gagttgtttt gcttttatgc
    33901 ttaaaagctc tatcccttct cttgcgttat tggccttgaa aaaacgcaca aaattaggag
    33961 aaaagatttt ttctatatcg ctttgtttag agctttcatc gtaaagttct aaaagtaaga
    34021 aattgtcttt attattttta caaagctcaa ctaaaacttt aagttctttt gtgggaattt
    34081 ttttagaagt tttgatttct aaaagctttt tttcgctaaa aagcgaacct ccgcttagaa
    34141 aatcacttgc acgagtaaag ctgtattctt caaaaaataa ttttaaaatt tcatccgctt
    34201 ggtatttttc cttgataaaa tcagcataaa gctcactttg aaaattatca gctccataaa
    34261 gaaagaaaaa attatcaatt tgatttttgg aaagtaaatt ttgaagttct tttctataca
    34321 ttactttcct ttctaagtct ttgggtgatt tttgcataaa tttttgccat gatgatgtca
    34381 gcttctaaaa tttgcacttc tacgctttct agtaaattta cccgcgtatc ataaaggatg
    34441 atatcagctc ctttgatctc atcatcaagt tttgctatac aaattccatc attttgcact
    34501 actagggctt taaatttttt gcctatattt ttagctgccc atctcgcaaa ttttctatcc
    34561 ataaaatcat aagcgacttt atcagcctct ctttcaagca cgctaaggtt ttcgcaagtg
    34621 ctttgtatat ttaaaagtag gtaattaaaa agtttttcat cttttttttg tttagctttt
    34681 aaaagtctat gtaagataag atcagaatac ctgcgtatag gacttgtaaa atgtgagtat
    34741 ttgtcaaaac ctaaaccaaa atgccccccg ttttcgctag aatactctgc ctttttttga
    34801 gctttaatga tgagtttatc cacttccgct cttaagccaa gctcatcggc taaagcttgt
    34861 atatcgcgta taagctcagg caggttaggt tttagtttta catcgattcc aagctctaaa
    34921 agttcattta aaagtctatc tatctttttc atatctgcac tagagtgatt tctaaaaaca
    34981 cctacatcga tgagttttgc tgcggcttta ttggctaaaa gcatacaatc ttcgatcaaa
    35041 ttatgcgaag gcgtgtcttt ttcaaaaatc gtgctttgaa gacttaaatt ttcatccaaa
    35101 ttcatcctca gttcttcagt gcggaattca aaggcattct taagacgatt tttgcgtaaa
    35161 gtttttgtga tttcaaaaag ctcataaagc catgaaagct cttttaaatc aggtttttgt
    35221 atcaaaattt catcaacttc atcataatta aaacggcgtt ttgagttgat aataccttca
    35281 aaaagttctt cttttacgac tttgcagtcc aaatcaagtg tgattttaaa acaatatgcc
    35341 aagcgatcta aatgaggctt taaagaacag atattttcac tcaaaggacg aggtagcata
    35401 ggtatagcaa tatgtggaaa ataaatagaa aatccacgat ttcttgcttc tttatctata
    35461 gcgctataag catgaacata ttcgctaaca tcagcaatag ctacataaat ttctcgtttt
    35521 tgagtgtcaa aataaatcgc atcatcaaaa tcttttgcat gtataggatc tatggtgcaa
    35581 aaaggcaagg ctcttaaatc catgcgattt tcatacatgc ttgcatcaac gctatcgccg
    35641 tttgctagag cttctttgat gcaagcgtcg ctaaattcgt tatttttatt aaaaagagct
    35701 aaggagattt tttcatctac gctttcatca tcgatatgtc ctaaaacttc tatgatgttg
    35761 ttatcttgat tttctatttt taaaattgtc cctaaaggta gtgcttttaa ggatttttga
    35821 gaagctttta aggtggtgct taatcctgtt ttgatattca ttccaagaac tgcttcgccg
    35881 tatcttttgg tgataacaag tgaggtttca ttagctcttt ttaaaaccaa aaccacttta
    35941 gcactagggc gttttttctt taaggggagt aatttagcag caacgatatc tttgtaattt
    36001 gctcctttta aatttttatt ttctataagc aaatcttttt taaaactctc atcaaaacac
    36061 tgtaaaaatc ctgtgccctt gctcgaaata tcaagggttc caaaaacata gccattatta
    36121 agatagtatc tatttttgtg ttctttgatg atgttattag ctagaagctc tcttagaatt
    36181 tgtttaaatt cattgctaac ttcatgagca cttatgccgt aattaagatt gtttaaaaat
    36241 tctttcactg ctttacttta tgtaaatttt cttgagaatt cttgcataaa gtttataaaa
    36301 aaaatatgaa atttaaaact ttattgttat aataagctct ttaattttga atttattaag
    36361 gagtaaaata atggctgtta cagtttatta tgacaaagac tgtgatttaa gtttgattaa
    36421 atcaaaaaaa gtggcaatta taggctttgg atctcaagga catgcccatg ctatgaattt
    36481 aagagacaat ggggttaatg ttgtcatcgg gcttcgtgaa gatggggcaa gtttttctaa
    36541 agcaaaaagt gcaggttttg aagtgatgag cgtaagcgaa gcttcgaaag tagcagatgt
    36601 gattatgatt ttagctccgg atgaaattca agctgatatt ttcaatgcgg aaataaaacc
    36661 aaatttaagt gaaggcaagg ctatagcttt tgcacatggt tttaatatac attatggtca
    36721 aatcgtagct cctagaggta tagatgtaat catgatagcc ccaaaagcac ctgggcatac
    36781 agtaagaaat gaatttgcta taggtggtgg aactccttgt ttaatagcga ttcatcaaga
    36841 tgagagcaaa aatgctaaaa atttagcttt aagctatgca agtgcgatcg ggggtggacg
    36901 tacaggtatt atagaaacaa cctttaaagc cgaaacagaa acagatcttt ttggtgagca
    36961 agctgtgctt tgtggtgggc ttagtgcttt gatccaagca ggatttgaaa ctttagttga
    37021 agcaggatat gagcctgaaa tggcttattt tgagtgttta catgagataa aacttatcgt
    37081 agatttgatc tatcaaggtg gaattgcaga tatgcgttat tctatttcaa acactgcaga
    37141 atatggcgat tatatcacag gaccaaaaat tatcactgaa gaaactaaaa aagctatgaa
    37201 gggcgtttta aaagatatac aagatggaaa ttttgctaaa gattttattt tagaacgccg
    37261 tgcaggtttt gcaagaatgc atgcagaacg caaaaatatg aacaattctt taatcgagca
    37321 aacaggccgc aatttacgcg caatgatgcc ttggattagt gctaaaaaat taatcgataa
    37381 agataagaac taaaattgtc aaaaaaactg attcaaatca agcgttattt aatcatcgct
    37441 atactttttt taatatgcgt gattttattt ttgggaattt tgattcaata tcaagattct
    37501 caaaatgcat taaaattcgc tcaaaattct agtaaaaata taacaataga acccaagcaa
    37561 gaaaatatat ccaatgaaaa tcatttgggt atttttaaag aaattcctta taaagacgaa
    37621 aatgataatt ttcaagaaaa caatcaaagc attttagaag agcaaataaa agatttaaat
    37681 ttaagtagta ttatagatgg aaatttaagc aaaatagatg aaaatttaag ccttgtagta
    37741 gaacaaaatt taagcaagga agaaaatctt acaaaagata tgaatttaag taaaacaaaa
    37801 caagcccgcc ttgctatcat tatagatgat atggcgaaca taagtcaagt tagggcttta
    37861 caggcattaa aactcaaact tatcccttca ttttttccac ccgataaaaa tcatatcgat
    37921 accccaaaac ttgctctaaa atttgatttt tatatggtgc atttgccttt agcggcgatg
    37981 aattatacta agcctgagct tgatacctta aatccaagcg atagtgaaaa gcgtattttt
    38041 aaaaaaatac aacaagtgaa aaaagatttt aaagatttaa aatttatcaa caatcataca
    38101 ggaagcttat ttacaagtga tgaaaaagca atgaaaaaac tttataaagc ctttgaaaaa
    38161 gaagaattga tttttgtaga ttctaaaacc atagcaagct ctaaagcgcc taaagtggct
    38221 aaggctttgg ggcaaattta tatacaaaga gatgtgtttt tagacaatcg cgatgatgtt
    38281 gcttatatca aaaatcaact catagaagcg gtaaggcttg ctaagcaaaa aggctttgcg
    38341 atagctatag gacatcctag aaaaaatact tttaaagcct tagagcaaag caaagatttg
    38401 cttaaaagtg ttgagttggt gtatttaagt gagatttatg caaagtgaac taccaagcgc
    38461 ttatctagag ctttttaaag agttgaaaaa tcctcctaaa aaactttatt ataaaggaaa
    38521 tttaaaactc ttagaacaaa gaaagatagc cattataggc tctaggcgta tgagcactta
    38581 cactaaaaat tgcgtttttg agctttcaaa tttgcttaaa aattcaaaga taagtgttgt
    38641 aagcggaggt gctttgggtg ttgatatcag tgcaagtatg gcggctatgc caagcactat
    38701 aggggttttt gccaatggtc ttgatgaaat ttatcctaga agcaatgaaa aaattataaa
    38761 acaaatttat gaaaatgctt tggctttaag cgaaaacgaa tcctactata agcctaagcc
    38821 ttatgatttt ttacttagaa ataggctgat tgtcgctttg agtgaagccg ttgttgttgc
    38881 gcaagcagat ttgcaaagcg gctccatgca aagtgcaaga cttgctttgg agcttaataa
    38941 acctttatat gttttacccc aacgcaaaaa tgaaagcgat gggacaaatt tactcttaca
    39001 agaaaaaaat gcgaatttgc ttttagattt taaagaattt gcaagttgtt ttggggttat
    39061 agaagaagaa aaggatgaat ttttagactt ttgtagacag ggcgtaagcg tggatgaggc
    39121 aactcaaatt tatggagaaa aagtctatga gtacgagctt gaaggaaaaa tttccataga
    39181 aggtctcttt ataagggttt tggcatgaga gctttggcct tagatgtggg tttaaagcgt
    39241 ataggcgtgg cgctttgtat agataaaatc gtcattcctt tagaaggtat aatcagaaaa
    39301 aaccgcaacc aagctgcaaa tgaagttaaa aatttacttc aaattcatga tatttcttta
    39361 ttgattgtag gtattcctaa gggaggatcg agcgaagaag aaatgacaag gcgtatcaag
    39421 cattttgtat ctttgcttga attcgataaa gaaattcgct ttgtagatga aagcggaaca
    39481 agtaaagaag ctttaggata tggtgtggct aatacacgca aaaaagatgc caagctagac
    39541 tctttagcag ctttaatcat gataaaggat tattttggaa tataatctag ccagtattta
    39601 taatgataaa gaacttgaaa atcttaaaaa ttcttttaaa ttgcccaaaa aaatatgctg
    39661 ttttataaat cgcctaaaat gtgataattt aacacttgaa agagaatttc aagatttgaa
    39721 tttagagtat gaaaagctta atgagtactg ctatcttttt aaggcttgtg ataaaagtat
    39781 tttaagctct atgcaagctt ttaatgaatt taaattttat atacaaaatt atgcttctta
    39841 tttgtgcgct ttaaatttgg atgtaaaggc agggcagagt gttttagata tgtgtgcagc
    39901 acctggtgga aaaagtatca atcttgctaa ttttatgcaa aatgaaggtt atctagcttg
    39961 caatgaagca agtaaagata ggttttttac cttgcaaaag aatttgaaaa attatggagt
    40021 aaaagctcga gtttttatga aagatggtaa aaatatagga aatttatgcc ctttaaaatt
    40081 tgataaaatt ttacttgatg caccttgttc tactttagca aaaatgggtt tagaattaga
    40141 aaaaagttct aaagagatta aaaacatagc taaacttcaa aaaaaacttt tacattctgc
    40201 actcaaggct ttaaaagtag gcggagagct tgtttatagt acttgcactt ttagcaaaga
    40261 ggaaaatgaa gaagtgatag aaaatgcttt aaaaagtgat tttgatatag agcttttgga
    40321 tataaattta gaaaatgctt tggcaaaaaa tgggcaaagt agcgaatttg aagcgatttc
    40381 taaatgtaaa cgcattttac cttgtgaaga atacgacgga ttttttatca ctaaattaag
    40441 gaaaaattga ttttaattct ttaaggctaa gttcgcatag aagctaaaat ttcattatat
    40501 attaaaatta ttcacatctt caagtaaatt cacaaaaaaa cttaaaaaac aataaatgtt
    40561 tttttggaaa atttaaaact taaagtccta tttttagggc tttgaaaaga aaatcacatc
    40621 gtgaaaagcc tgtgaataaa aaataaattt tttaaaactt aaaaagataa tttcactcgt
    40681 aatttctaat tttttctagc ttaggtacta taacaaaacg acaatagctt tgattgggat
    40741 tgtgtataaa ataatgctga tgataatctt ctgctttgta atatttttga agtttataaa
    40801 tttgtgtgac aatcggaagt gaaaaattaa cttgttcttt ttttataaaa tcttctatgg
    40861 tatttttatc gctttggttt tcataaaaaa ttgccgaacg atattgaatt cctatatcag
    40921 ctccttgttt gtcaaagcta gttggatcat gaattttaaa aaataagctt aagatttgtt
    40981 ctaaggaaat tttggcttca ttgtaaatga ttttaaccac ttctatattg ccatcgccat
    41041 tgcaaacact ttcatagcta ggattgtcat ttccacctgt gtagcctact tcagtgtgta
    41101 taatgccttc aaaattttca aaagcagctt ctacacacca aaaacatcca ccacctaaaa
    41161 tgatattttt cataaagaat ttccttaaag atttagccta taaaaggcta aataaagaat
    41221 ttatttgtag tttttaatcg ctttttctaa aatttcaaca gcagcttttt catctttgaa
    41281 atcttgcact tttacccatt tgttaggttc taagatttta taagtttcaa agaaattttt
    41341 gattttattt agagttgctt gtggtaaatc agtataggtt ttgatattgt catatcttgc
    41401 gtcgatttta gaatttggca cagcaagaag tttttcatcc attccacttt catcttccat
    41461 gattaaaaca ccgattaaac gacatggaat aactgcgcct gcttggatag ggtattcatt
    41521 taagactaag atatccacag gatcgccatc atcagctaag gtatttgcga taaaaccata
    41581 atttgctgga taaaacatcg cgctagccat aacgcgatcc accatgatcg caccgctatc
    41641 tttatcgatt tcgtatttaa tacttgagcc gtatggaatt tcaattacag cattgatttt
    41701 gtttggaata tctccgattt tgattttgct taagtccatt ttttatcctt atatactttg
    41761 aattttttta atcaactctt tcatatcagc aacgataggt tcgatagtgc gttctccatc
    41821 gatgatgaaa tgaagttttt tcttttggta aaaagaaatg atttcttcta gtggctcggt
    41881 atacactttc attctattat aaaacacttc ttcgttgtca tctgcgccac gacttcttcc
    41941 taaaacgcga tctttagcta cttgttcact cactcttact tcgattacgc cttttagaca
    42001 aatttcattt tgctcgctta aaactttatc aaattctacc atttgctcca catttcttgg
    42061 atagccatcg ataataactg tttttgtagg agcagctttt agcgctgaaa ctatagtatt
    42121 tacaactaca tctaatggaa ctaaatttcc cttagaaata aaaccatcta tggttttgcc
    42181 aagttcactt ccgcttgcta cttccgctct taaaagatct cctgtagaat aatgagtaac
    42241 atccgcatca gcttgtgcaa tcaaactagc atctgtagtt tttccgcttc ctggtgcacc
    42301 tataattaaa aataattctt tcattttata ttctccctta atttgattcc taattctctc
    42361 atggcttcat tgctagcagc tgaaggagca tccgtcatca agcattgtgc tctttgagtt
    42421 tttgggaatg ctataacttc tcttatgcta tttgctcctg ttactagcat gataagtcta
    42481 tcaagcccta tagcaatacc tccatgtggt ggagcgccaa aacttagagc atcaagtaaa
    42541 aatccaaatt tttctttttg ctgttcttca tcgatattga gtaatttaaa aactttttgc
    42601 tggatatcat ttttatgaat tcttatgcta ccaccaccca gttcaacgcc attaagtaca
    42661 acatcataag cgatagatga tatttcttct aagtcggcct catcgatatt ttttggcata
    42721 gtgaaagggt ggtgcattgc agaataactt ccatcatcat tttgttcaaa cataggaaaa
    42781 tcaactaccc ataaaaattc caaagcatca gggttgatta aattaagttc tccagctagg
    42841 aaaattctaa accttcccat ataatcaagc acagtttttt taacccctgc gccaaaaaat
    42901 accacatcgc ctacttcaag ttcacaacgc ttaataagtt cgtttaaatc ctcttcgtta
    42961 aaaaatttgc aaagtggacc tttaagccca tcttctttaa cttgtataaa ggctaagcct
    43021 tgagctccaa atttgcgtac aaattcttca aatctttgca tttgtctttt tgaaaagata
    43081 gtatcaccct ttggaacgcg taaagctttg acacgatttt ttttgctatc tttggcaata
    43141 tttgcaaaaa tttcattatt tgactttgca aagatatcta taacatcgat cagttttaaa
    43201 tcaaaacgca aatcaggctt atcacttccg tagttttcca tagcctcttt gtaaggcatt
    43261 tgtctaaaag ggatttgaat ttctttacca caagctttaa aaatatcttt taaaaaggtt
    43321 tcagccgtag caatcacatc tttttgctcg caaaaactca tttcaacatc aatttgtgta
    43381 aattcaggct gacgatctgc tcttaaatct tcatctctaa agcatttagc aatttgaaaa
    43441 taacgatcaa agccgctaca cattaaaagt tgtttgaaaa gttgtgggct ttgaggaaga
    43501 gcataaaatt ctccttgatg tacgcgtgat ggtacaagat aatctcttgc tccttctgga
    43561 gtggctttgg ttaagatagg ggtttcaact tctaaaaatc ccatatttgc taaagaattt
    43621 ctagcagcta tacaagcttt ggagcgtagg gcaaaatttt cataaagctt aggatttctt
    43681 aaatctaaaa agcggtactt aaggcgtaat tcttcattta cactttcatc acctatgcca
    43741 aaaggaggga cagcactttc attttcgata atgagcttgc ttactactac ttcaatttca
    43801 ccggttttta atttaggatt tgtaagtcct tctcctcggg gtcgaatttt tccttcggct
    43861 attaaaacaa attcatttct tgtgcgagag gctatttcat gagcttcttt gctatcattt
    43921 ggatcgcata caagttggat aataccacta cgatctctta aatcaataaa aattacgccg
    43981 ccatgatctc ggtagctatt aacccagccg caaagtttaa ccacttcgcc tatgtgggta
    44041 gaatttaagt ctgtattgta atgacttcgc aaaatttttc cttgaaaatt aattttttta
    44101 acatataagt taaaattata atatttttat tcttttgctt agctaagatt tgttataatt
    44161 ttttatgcaa aataaaatag attataaaaa cattaaaaaa atcggacttg cggcgcgtcc
    44221 taattcaaat ttagacaagg aaattttgat tctaaaagaa attttagaaa aaaaaggtgt
    44281 ggagcttttg ctctataagg aaagttctga aattgtaaaa ttaccaaaat acgaccttga
    44341 tacattgttt gagctttcag attttgtaat ttctttgggt ggtgatggaa ctttgatttc
    44401 tttatgccga aaagcttgcg agtataataa agcggtttta ggaattcatg cgggtcattt
    44461 aggattttta acagatttta aggtggatga agctgaagtt ttttttgaag cttttttcag
    44521 gggagaattt agggtagaaa atcctttttt attgagtatt attttagaaa gtaatgatgg
    44581 tcaaatcatg caaaaatttg cttttaatga tgtagtgatc agcaaggata gaaaagcttc
    44641 tatggcgcat atagaggtat ttcgcaaagc taaaaaattt aacgaatatt ttggagatgg
    44701 tcttatagta gccactccag caggttctac agcatacaat ttaagtgcaa atgggcctat
    44761 agtttatact ttagcgcaag cttttatact tacacccgtt tgttcgcatt ctttaaccca
    44821 acgccctata gtactgccta agggctttga tcttgaaata ggcgcaaaag attgtatttt
    44881 tagtatagat ggacaagaaa attataaaat gaatgatttt aaaagcgtta aagtggggct
    44941 tagtgataaa agtgtggcac ttatacatcc taaaaatcga gattattttc aaatattaag
    45001 agaaaaatta aattggggac attgatgata aatagagttt tgatgaaaga aaatcttggc
    45061 tttaaagagg ttgagcttga aatttctcag ggacttacag tctttacggg tttaagcggg
    45121 gcgggaaagt ctgtactctt taagggtata ttgtctgctt ttgcattaag cgagagtgag
    45181 gcaaagcttg ttgagattga gcttgatgat aagatagatt tagaagaata cggcatagaa
    45241 ggtgaagagg aaaatgtttt taagctttta aaggataaaa atacaaaata tttcatcaat
    45301 aatcaaagta tttcaaaaaa aagtttgatt catttgagta aaaaatttat taaatatcta
    45361 agtgctaaag aaatcaatga atttagcaat gagaaatttt taaatctctt agatgcttta
    45421 gaatgtgcga aaaatcctga atttgaagat tttttatctc attttaaaga tgattataaa
    45481 caatggcttc aaatttcaga agaattgact acaattttag aagaagaaaa aaggattgaa
    45541 gagcttaaag aattagcaag cacgcagatt gaaagaattt ctaaaatcaa tcctaaagtc
    45601 ggagaatacg aagagctttt aaatcttaaa aagaaattat caaaaaaaga caaaatagaa
    45661 gcagcttggg aaaaggcaag tgctattttt gaattagaaa aagtagttat tgatgcttta
    45721 aatcttagcg aaaaagatac gagttttttt agtgaatgtt taaacgaact tcgcatcata
    45781 actgaaaatg aaaaaatcga agatttggat tttgatatag aagaagtact caatagaatc
    45841 gaggatttat cctctttaat caagcgttat gagagtatag aaaatgcttt agaggtattg
    45901 gaaaataaaa aaaatgaact cgctcattat gataatttaa gctttgaaaa aaaagaactt
    45961 gaaaaaaaac tagaaaaaat cgaaaagaaa atcaatcaaa gtactcagtt attaactcaa
    46021 gctcgtatgc aaaatttaaa aactttagag gattttttaa acgattatct aaaaaacctt
    46081 tatatgaaaa atgtgagttt ggaattagta gatacttcaa aaatcacttc tttgggaaaa
    46141 gatgagatca aattaagtat caatgctgca aatttaaaaa atttaagttc aggtgagctt
    46201 aatcgtttaa gacttgcttt tatcgcgact gagtgtagaa ttttaaattc aggcacaggg
    46261 ataatatttt tagatgagat tgatgctaat ttaagtggca aagaagcgat gagtatagcc
    46321 aatgttttaa atgagctttc tgctttttat caaatttttg ctatatctca cttaccgcag
    46381 ctttcttcaa aagctcataa tcattttttg gttgaaaaaa atgcttcttg tagcacggtt
    46441 aaaaaactta aagataaaga gagaattaaa gaattagcaa gaatgataag tggcgagact
    46501 attacagatg aagctttgga atttgctaaa actttgttta aagcttaagc ggaattttta
    46561 tttgtttgtg ttagaattgg gattttttta attttattat aaagatttag ttttaaaaaa
    46621 ggtattttta tagattatga ataaaaaaat tttgctgatc gatgataata aaatgcttgg
    46681 aaagctttta gctaaaaaga tacaaactac tttaaatcat gaagttgata ttgtttttag
    46741 ccttgctgaa gttaaggcat tgcccaatga tgagtatttt ttaacttttg cagatttatg
    46801 cttgcctgat gcacctaatg gggaagtggt ggattatgtt ttggcaaaaa attggcctgt
    46861 tattgtatta accgcgagca acgataaagc tacaagagat aaatttatgg ataaagatat
    46921 tttagattat atctttaaag aaagcgatac ctgtatagat cagattatag attctattgt
    46981 caagcttgag cgttatgcta agactaaggt tatcttagcc ctaagtaaac ttcctgaacg
    47041 caatgaaata aaaaaaattc tcacacaaag aaaatttaat gttttggccg ctgctcatgg
    47101 tgaggaagcg atgagttatt taaatgacaa tagcgatgtg aagcttatta tcgctgatgc
    47161 gaacatgcct gttattagcg gaagtgagct tttaagcgaa gtaagagcgc gttttagtga
    47221 tgatgaattg ggtgtaatta ttttaggtga taaagatgat gctttagagg ctagtttgct
    47281 tgtaagtgga gctaatgagt atttggtaaa acccttaagt aaagaaagtt taaattgtcg
    47341 cttggataaa tgtcttcatt atatggccaa tatgcagttt ttaagcattt ataacaatct
    47401 tgatcctatt tccgggataa aaaattccaa tgctttattg agttgcgttg aagattattt
    47461 aaatgaaatt gtaagcaaag aagaagaatt tgcttttgca ttcttagata tagataattt
    47521 aagaaattta aacgaagaat acggctatga agtaggggat aaaattatta aaatttgcgc
    47581 tgatgagatt gttaatgaaa ccaaagggcg tgatattgtg ggtagatata gtgctgaaaa
    47641 aatttgcata gtattaaaga atatttcgca agaaagggcg attaaaattc tttctcgtat
    47701 tcgagtcaat ataaaaaaag ttggaatttt agtcaattta gatgaagtct tttttactgc
    47761 ttctataggg gtagtttttg ctaagagtgg agataaattt gaaatcttag tcgataaagc
    47821 ttcaaaagca ctttcgcaag ccaaggctaa tggtaaagat agagtagaag tatgttctta
    47881 aatcttgaat ttaaagatgg tctaaagatc atcgatactc attgtcattt agatagtgaa
    47941 gtatttaaag aggatttaga tgagctttta aagcattcat ttgataatgg tatagaaaaa
    48001 atcatcatac caggtgcaga tattaaagat ttaccttatg cagcagaact tgctagcaaa
    48061 tatgaaaatg tattttttgc cgcaggtgtg catccttatg agctagaagg ttttgatgag
    48121 aaaattttaa gagcatattt gcaagacgaa aaatgcgtgg ccgtaggtga atgtggactt
    48181 gattattttc gttttaaaag tgaagattta aaagagagag aaaaagaaaa agaggagcaa
    48241 aaaaggcttt ttgtagctca acttgagcta gctaaagaat ttaaaaagcc tgttattatc
    48301 cattctcgcg aagcaaataa cgatacttat gaaattttac acgagcattc taaagatctt
    48361 gttggagggg ttttgcattg ttttaacgca agcgaacatt tattgcgtct tagtgatgat
    48421 ggattttatt ttggaatcgg tggtgtttta acatttaaaa atgctaagaa tttagtaaat
    48481 attttaccac aaattccaaa agatagattg ttgctagaaa ccgatgctcc ctatcttact
    48541 ccagagcctt atcgtggtaa aaggaatgag cctttattga ctcaatttgt agccaataaa
    48601 atgagtgaaa ttcttgattt accaaggcaa gagcttttaa ggatttgctt ggaaaattct
    48661 tacagattat tttttaaagg ttaaatatga aaaaaattat attttgtttt attttatttt
    48721 ataactttct ttttgcacaa actaccactc ctgaatttta tgaaagacaa atgagtgttt
    48781 taagaaattt agacattgat ccaagtttta tcagtgattt agcttttgtg caaagtcagc
    48841 aggatttaag atcaaagcat gctccgactt tgattgatgg tatacaaaat ttctcaaaag
    48901 ttactcctat gataagaaaa attctagcac aacaagaagt tcctgaagaa attttatatc
    48961 tagctatggt agaatcagga ttaaaagcgc atagcgtttc taatgctaag gcagtaggtg
    49021 tgtggcaatt tatgcaaccc acggcaagaa atttaggact taggattgat gcttatgttg
    49081 atgaaagacg cgatcctgta aaatctacat atgccgcggt tcattatcta aaaagcttaa
    49141 aagaagaatt tgggaaatgg tatttagcgc ttttagctta taattgtgga aatgggaaat
    49201 tgcgtcaagc aataaagcaa gcaggaagtg atgatttaag agtattaatc gatcctgata
    49261 aaaaatatct ttctttagaa actagaaatt ttatacgcaa aattttaact ttagctttct
    49321 tggctaatga tagggatttt ttacttgata aagatggagc tttggttaat tatgctttaa
    49381 ataacgattt tgcaaaggtt gatgctcctt cttcggtcgc attaaaagat ttggctaaaa
    49441 atttaaatat ggatttggca acttttaaaa aatataatcc acattttaaa catggtttta
    49501 ctcctccagg taaggggtat tatatgtata ttcctttaaa taaagtagct ttttttgata
    49561 aaaattttaa agttgaaaag cttgcaaaag tagatacaac catacctatg actaaaattt
    49621 atgttgtaaa atcaggcgat tctttatata aaatcgctaa aaaatataat actagcgtag
    49681 agcaaattcg agaattaaat aaaattgcca aaaatcactt aagtatcaat caaaaattaa
    49741 tcatacctat taaggagaat aaaaatgcaa actataaaac aaaagctaaa gaaaacttta
    49801 cccaagttgt tagccgctag tttagttgca actttttcta gcggatgctt cggaggtctt
    49861 ttttctagcg taggttcagc acaaatatat tatccaagta atgattttca tagtagtcct
    49921 tcaggatccg gaagtaaagg gactatgaaa ccttatacta taaatggtaa aacttattat
    49981 ccaactgttg tatcagtggg tgaaacagca gatggtatag caagttggta tggaccgggc
    50041 tttcatggta aaaaaacttc taatggtgaa acttataatc aaaatggttt aaccgcagct
    50101 cacaaaactt tacctatgaa taccatttta aaggtaacta acctaaacaa taaccgccaa
    50161 gttaccgtgc gtgttaacga taggggtcct tttgtaaata acagaattat agatctttct
    50221 aagggtgctg caagtcaaat cgatatgatt gctgcaggaa cagctcctgt gagacttgag
    50281 gttataggtt ttggttcggc taattcaggt aataatgtcg ttcattcaaa tataaattat
    50341 ggagctagtg gcggaattgc aaataatggt caaatttatg aaggtggaaa ttttatggtg
    50401 caaattggag cgtttaaaaa tccatcagga gctcaaacta tagcatctag atataaaact
    50461 tatagaacct attcttcaac catacgcaaa agttcggttg atggcttgag tcgcgttttc
    50521 ttgacaggat ttagaagtga agaagaggca agagattttg cagcaagtgg tgcatttgct
    50581 ggtgcttttg ttgtgcgtga gtaaaaaatg atagaattga tatttttaga tgtagatggt
    50641 tgtcttacag atggtaaaat catctacact tccaatggaa gtgtgattaa agaatttgat
    50701 gttaaagatg gtgcagctat agaagcttgg attaagctgg gtaaaaaaat tgctattatc
    50761 actggaagaa attgtccttg tgtgagtgct cgtgctaagg atttgaaaat agaaattgta
    50821 catcagggtg ttaaagataa attaacttgt gctaaaaaaa ttttagaaga gctgaattta
    50881 gatttttctc aatgtgcggc tataggggat tattttaacg ataaaaattt acttgaaaat
    50941 gttggcctta gttttaagcc taaggatgca catagggatt taaaagttga tatcacactt
    51001 gataaaaaag gcggaaaagc agctgtggct caaatgatag agtatattat aaagaaaaat
    51061 gatatgcaag aggaatggga taagctttgg ctataagaat ttttggaatt ttgatcgctc
    51121 tttttactat tacttttaca attttaagtt tgcaagatcc ttattcttta aatattaaat
    51181 cctatgcttt aaattttaaa aatatcgaag cttccgattt aaatgcttac gagcttaatg
    51241 caagcaatgt aaaatcatac tataaagcgc aatcttgggc gcgttataca gacaaagatg
    51301 agtttgataa ttttgtcaat tttaatttgg attttaattt aagtgcaaat aaattggaac
    51361 ttaaaggcaa ggagatggat aaggttttac ttgaaggcaa tgttacctac ataggtttaa
    51421 ataatacaaa aatttttgct gataaagtag agtatgcgcc taaaaataaa attttaagca
    51481 ccaatacagg atttaaagct ttgataaatg gaagcattat taacggaaat actttaaact
    51541 acgatgtaga aaagaaaatt ttacaagttc aaggagtgaa tgcgtggtta gaaagataat
    51601 tttatttttg atgagtatca gtatatcttt agctagccag atagaggtta aggccttaaa
    51661 tttttattcg gatgaaaata agggtgaaag catactcagt ggcaatgttg aaatcataag
    51721 aggtgatgat attttaactg ctgaaaaagt gattatatat acagataaaa atcgcaaacc
    51781 tatgcgttac gaagctgtgc aaaatgctaa ttttaaaatt gttttaaagg gaaaaactta
    51841 taaggggagt ggagataaat ttatttataa tgtggctaaa gatatttatg aaattgatgg
    51901 aaatgctttt attaatgaac ttgaaagtaa tcaaaagctt tatggtgata ggataatagt
    51961 agataagaga aataatgttt atcgtgttga aagcaaggat aaaaagcctg ctcgatttat
    52021 atttgattta gagcaaaaat gataataagt gctaaattta tcacctcttt agacaaattt
    52081 gataaaaatt ttgcatccca ttttagtgaa gtggcatttt taggaagatc aaatgtgggg
    52141 aaaagttctt taattaattc tttatgtaag caaaaaaagc ttgctaagag ttctgctaca
    52201 cctggaaaaa cgcaattgat taatattttt gaagttttat gtaagaagga tgaggataaa
    52261 tttagtatcc attttattga tttacccggt tttggttatg cgaaagtttc aaaaaatcta
    52321 aaagaaatat ggaataaaaa tttagatgag tttttaaaat taagaagttc gattaaactt
    52381 tttgtgcatt tgattgattc aagacataca aatttggata ttg
//
LOCUS       DAQUWA010000003        47604 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.003, whole genome shotgun sequence.
ACCESSION   DAQUWA010000003 DAQUWA010000000
VERSION     DAQUWA010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 47604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47604
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.003"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            217..1188
                     /locus_tag="R8X70_000110"
     CDS             217..1188
                     /locus_tag="R8X70_000110"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEF2927932.1"
                     /translation="MKKYISSCLAICCLSSAIYANDVKYDAQKIADIFYQLNADPKNP
                     KVKVNHAKGFCAMGTFEPAQSINKEIDVPLLTYKSLPIQVRYSLGGAFKDDKSKTRGM
                     AIRITDPQDSASWTMVMLNTEINFAKNPKEFGQFFEMRLPVNGKVDQEKISKIMQEVD
                     SYRNFAAYTDKIGISKSVANTPFFSIHTFYFKQTGSENYLPARWKLVPSEGVAYLNEA
                     QMKSASSDFLKEDFEDRVKTNKPVEYKMYLVYANKNDIINETTALWSGKHKESLVGTF
                     KVNALSDEDCNFDVYFPSDVPQGVNPPQDPLFDVRNEAYAITFGMRQ"
     gene            1454..1963
                     /locus_tag="R8X70_000111"
     CDS             1454..1963
                     /locus_tag="R8X70_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEF2927933.1"
                     /translation="MKTLIIFAHTFWEDSKANKALFESIKNSKQVQIHNLSEIYKEGK
                     IDVSKEMALLKNADKIIFQFPLFWFSTPALLKEWQDRVLTAILYGENKELLKDKKFQI
                     VTTLGGAQESYDGHHGATLEELLKPICYAFEYLGCKSLKPFAIFSADANKLDLKAYQD
                     AISQNSGCS"
     gene            2202..3317
                     /gene="solA"
                     /locus_tag="R8X70_000112"
     CDS             2202..3317
                     /gene="solA"
                     /locus_tag="R8X70_000112"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HEF2927934.1"
                     /translation="MTYDIAVIGSGSVGSFAGYYAAKMGLKTCLIDKFQAPHTQGSYH
                     GDTRIFRIAYGEGEKYIPLLQEAYTLWGEFEKEQNTKLFERCGLLNIGSNSTFMQNVL
                     SSVKNYDLKAKILNAKELQENYNICVSDDFFGVLETDTGFVYSDLSVKSAINAACKLG
                     AHTLCDEIVRICKENGVYKIQTQNSSIQAKQILISAGSYVNEVLGVCEFDLPKVPVGI
                     RRKVVNWFDTDSYKLSQGFPAFILEFEDDYFYGFPDFADGLKVGRDKVGEIISTREER
                     VEFGSYEQDTLDIGKHIKEFFPDLKDFSKGSVCTYPLSPDDDFIIDFLDENLFFMGGL
                     SHGFKFAPALGLLGVKALQTQKLDPSIKQYFSLKRFG"
     gene            complement(3344..3946)
                     /locus_tag="R8X70_000113"
     CDS             complement(3344..3946)
                     /locus_tag="R8X70_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HEF2927935.1"
                     /translation="MKKIIFLLCLCISFVFAKQIYIVHGYGSDENYGFLPSVAKNLKA
                     KNHEVLLLSFPNAFSPKLDEWMQTMSQNFTKLDENTFFITHSLGGVAVLDFLNSLDER
                     TKIGGVIMVAPFDEPLAKLPILNDFIKPKLDYKKLDNMIIHKIIISAKDDKVVPIWVS
                     ENLAKKLNAKFIQTPNGGHFMESEGFKDLPLVIEELERIK"
     gene            complement(3973..5460)
                     /locus_tag="R8X70_000114"
     CDS             complement(3973..5460)
                     /locus_tag="R8X70_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEF2927936.1"
                     /translation="MQNKIDKITDILRRDDGISGAMHYSEQISWILFLKFLDDYEEEL
                     KLEAILNDKAYKSILEEKFSWRIWAAPKTSEGKLDVKNALSGDDLLSFVNNELFPYLK
                     SFKDNENFKSIEYKIGGIFEFIDNRIANGHTLREVINLVDELSFSKESDVFALGEVYE
                     KLLKDMGSDGGNSGEFYTPRPLIRAMVEVIDPKAKERIYDPACGSCGFLVESFLHILY
                     EDRNKNKKANLSVEELEFLQNDALFGKEKTPLSYAMGVMNMILHEVKSPNIIKTNTLN
                     KKITDITQSEKYEVILANPPFGGKEKEQIQNNFPVKSNATELLFLQHILKSLNNNGRC
                     AIIVPEGVLFQNSNAFVSVKKDLLENFNLECVLSLPSGVFLPYSAVKTNVLFFSKGKR
                     SICGEDDKVYYYELIPPFKLTKNKPLEYAHFEEFLKIYKERKITPHSYLVSIKELEER
                     NYDLSAKNPNSKEEKTLREVEEILSTLKANQEKANELLQKIQNII"
     gene            complement(5461..6531)
                     /locus_tag="R8X70_000115"
     CDS             complement(5461..6531)
                     /locus_tag="R8X70_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEF2927937.1"
                     /translation="MKEFIPPKLPLNIELNSNIYSLIIKASRKLAELNGLSKSIPNPN
                     ILINALILQEAKDSSEIENIITTHDELFLSQIDESKLTRAAKEVKDYENALKKGYELL
                     KKERLLRNAHILEIQKRLERNNAGFRKQSGTMLKNPITGEIKHIPPQNHSDIQELMRN
                     LEQYINDDTLDELDFLVKMAIIHYQFESIHPFYDGNGRTGRIINILYLVYKGLLDLPI
                     LYLSAYIVKNKGEYYSLLQKVRDERAILEWIEYILKGVEQTAIKTIETIATIEKMMLN
                     VSEILQNKTNFYSKDFVELLFSHPYTKIDFLIEKLNISRQSASKYLKICENLGVLECI
                     KIGRNHYYINIELLRLFKKGIF"
     gene            complement(6651..7859)
                     /locus_tag="R8X70_000116"
     CDS             complement(6651..7859)
                     /locus_tag="R8X70_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEF2927938.1"
                     /translation="MTNLPQGWKMETLGEILSSDKYSIKRGPFGSALKKSFFVEKGIR
                     IFEQYNPINNDPHWKRYFISHEKFQELEAFKATEGDLLISCSGTLGKIVELPKDTEMG
                     IINQALLKIRLNNIKILNSYFIYYFNSPIMQEKILESTLGSAIKNIASVKILKQIEIP
                     LPPLKEQERIVGILDFAFSKIDENIKKAKENLANIDELMQSALQKAFNPLNDNTKENY
                     QLPQSWEWKSLEEISENISAGGDKPKNCTESKTAKNQIPVYANGVNNNGLVGYTDKAT
                     IIKPSLTISARGTIGFVCIRKEPYFPIVRLISLIPCENILCLHYLYFCLNFFIAKGEG
                     SSIPQLTIPKFKSLQIPLPPLKEQEQIAKHLDFVFEKTKALKELYTKELKDYEELKQS
                     LLNKAFKGEL"
     gene            complement(7878..10275)
                     /locus_tag="R8X70_000117"
                     /pseudo
     CDS             complement(7878..10275)
                     /locus_tag="R8X70_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867869.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            complement(10279..12597)
                     /locus_tag="R8X70_000118"
     CDS             complement(10279..12597)
                     /locus_tag="R8X70_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEF2927939.1"
                     /translation="MQNLYSEDDTRVKLIDAKLYASSWSEENIIRNYYFTDGRKLIGN
                     KRAERKFADYLLKFQNNNLAIIEAKKQNKDALDGLSQGIEYAKTLNVPFVYSTNGDKI
                     YEYDLRVSRGEYIENFPSPNELFQRVYGNLKEWQYKLLTQRELYIPQKTLRYYQKIAV
                     DKVIEALINGKDRILLTLATGTGKTTIAFALCYRLLEARWNKENKDQKPKILFLCDRV
                     SLRDQALGEFNAVESDCKVISAEEIRKNDGKIITNANVFFGIYQSLAANSKDQENTQE
                     EQESKFYLQYPKDFFDLIIIDECHRGGANEEGNWACVLEHFSSATHLGLTATPKKSDN
                     VDTYRYFGESAYEYSLKEGIEDGFLTPYKVKRITTTLSEGYVYNPDDLIEGELEKGFY
                     KMSEFERNIHLPQYNDFLAKEILKLIDPMDKTIIFCANQAHASDIKRAIDKFKSVKRD
                     DYCVRVTSDEGKIGLEYLKQFQDNDKSYPVILTSSKMLTTGVDARNVRNIVLLANIGS
                     IIEFKQIIGRGTRVYEGKDFFTIIDFVGATKLFYDPKWDGEQVKDEDKEDKSEIWGKQ
                     NKKESDKTKETESKKAITVHLKGTKLKVLDINTSYLGSNGKPLSTKEFLEFLIGKLAE
                     YYDDEVKLREIWSKQETRLNFLKTLEKDGVDENALKDLGEIFDKKDCDIYDVLAHLSF
                     NAEIKTRQERVLQVEKSEFLKRFQKEKALKFIEFLLGRYQQYGIKDFDRSLAPLIELS
                     SLGNVKEIVSEFGGVENLKQSVDDLQREIYAR"
     gene            12731..13810
                     /locus_tag="R8X70_000119"
     CDS             12731..13810
                     /locus_tag="R8X70_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEF2927940.1"
                     /translation="MDSKIFLENGRIQSKGYAMLSKDAKFTPFEFTRHAVGDNDILIK
                     ILYAGICHSDIHTARSEWGEAVYPCVPGHEIAGEVIAVGKNVSKFKVGDYAGVGCMVN
                     SCGECEACKKSQEQFCEKGQTIYTYNSCDIFHDNENTYGGYSNNIVVSEKFAVCVPKD
                     APMEKVAPLLCAGITTYSPLKFSNIKAGSSVAVAGFGGLGMMAVKYAVKMGAKVSVFA
                     RNENKKADALAMGVSSFYTSTDKNAVKERFDLIISTIPTPYDPSAYMDLLKFGGEMAI
                     VGLPPHEVAPSISVITFVHKAGKKVYGSLIGGIAETQEMLDFSLKHKIYPETELITSK
                     DIDKAYENLTSGKAKFRYVIDMRDE"
     gene            complement(13811..14263)
                     /locus_tag="R8X70_000120"
     CDS             complement(13811..14263)
                     /locus_tag="R8X70_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HEF2927941.1"
                     /translation="MIELIGDVNLEKYMGTWLEMARKPAFFQKSCVQSKAEYQLEYEG
                     STPVVNIKNICVKKDGEVSQVQGKAKVKSPRALSVKFSIFMNLFNKTNYEILFIDTNY
                     EVAVVGSPDKEYLWILSRKIIDKKEIDKLLDIAKQKGFDISDIVFDKY"
     gene            14387..15577
                     /locus_tag="R8X70_000121"
     CDS             14387..15577
                     /locus_tag="R8X70_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2927942.1"
                     /translation="MQQSSITINNTYQIKILITLCLGVFGLISMELGVMGIIPLISEK
                     FGVSVSDAGWSVSIFALIVMCCAPIAPMLCANFNPKKLMLFCLAIFSLSSLASMFVND
                     FWLHLILRAIPAFFHPIYLALAFSTAANLADDKSKVPHIVAKIFMAISAGLVLGVPLS
                     SYFGGNFSFEMAMAFYVVINSLAFFITLFFMPEFKKTSRIKVGKQLLSLRYALLWISM
                     LAVFCISTGYLGFYSYYSEFLFSVSKMSFTNISLALFIYGFASIIGNNIAGKTLVNHS
                     NQTLIFASMAMILIYALIFVNAAQFAIMLTLSLILGIVNGVMNNAMHYIITFPFPRAK
                     DFTNGLFISVSNISISVGATLCGLVISIKETKYIAISSIIMVGLGLILVLVRMRLEDK
                     KLKI"
     gene            complement(15627..16073)
                     /gene="tnpA"
                     /locus_tag="R8X70_000122"
     CDS             complement(15627..16073)
                     /gene="tnpA"
                     /locus_tag="R8X70_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010889992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEF2927943.1"
                     /translation="MKKARKMRKNNYKLHGYISTNRSKHNLKAHLILVCKYRKKLLVG
                     LLNDEIKAIIDKIANASDFNIIAMESDIDHLHLMVQYLPKVSITQIIRKIKQITTFRI
                     WQDKRFYHLLCRNFWKEKTFWSDGYFACSVGEATPETIKKYIENQG"
     gene            16117..17316
                     /locus_tag="R8X70_000123"
     CDS             16117..17316
                     /locus_tag="R8X70_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEF2927944.1"
                     /translation="MLRAVKYRIYPNKAQQELILKHFGCARFVYNHFLNYRQERYALG
                     IKETYFTMQSKLTELKKEHTFLSECNSQSLQMALRQLVTAFDNFFSKRAKYPRYKSRK
                     YSKQSFAIPQNIKLSKNRVILPKFKEGIKAKIHKILSNDCVIKQAFISCVAGNYYVSL
                     SYEDNKSIPKPVEIKSAVGLDMGLENLLIRSDKIVYENKKFLQNKEAKLIKLQKAVSK
                     KKKGSNNRAKAIKKLAIAHHRVVLARDDYLHKITNEITNDYDFIAIENLNVKGLIRNK
                     HLSKSIANVSWHKLISMLTYKAELKGKTLMQIDKFFPSSQICSNCGVNTGKKALNIRA
                     FTCPNCNTYHNRDINASINIRNYALGMLDDRSRVKIDKFRVGITRSYACGDSSCGTSK
                     YGKIFAS"
     gene            17388..17969
                     /locus_tag="R8X70_000124"
     CDS             17388..17969
                     /locus_tag="R8X70_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEF2927945.1"
                     /translation="MKNILLLNGAKSFGHSGGKLNDTLHEVAKESLLNLGLKVDETYI
                     DKGYDIENEVAKILNADAIIYQMPGWWMGEPWIVKKYIDEVFTAGHGKFYANDGRSRE
                     DASKKYGSGGLVNNKKYMFSLTWNAPLEAFNDKDQFFEGVGVDGVYLHLHKANQFLGM
                     KPLPTFICNDVMKNPQVEKYIEDYKAHLQKVFS"
     gene            18103..19002
                     /locus_tag="R8X70_000125"
     CDS             18103..19002
                     /locus_tag="R8X70_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEF2927946.1"
                     /translation="MDRSKYLFILLVIAMFLWGSSWPTSKILANYTDTSIITFWRFFF
                     VVLGSFFVLSFLKIPLRLEKNALKWVLIAGVLNGLYAFVFFIAIKHGLAGKGGVLVTT
                     MIPIFSYLIFVIAIFFQKDKKSTHKITKSEILGLFLGLISGLCLLNLGSMEELLGKFN
                     ALFLSCAFIWALMAVFTHKAKGTHPLAINFYINLMSLLMFSWVLFDLKSYEIFQFDFK
                     FWINLFVVAFLSTVVGTSIYYYGIHILGSVKANSFVLITPASALICSFFILDEVPTIL
                     TLIGCVLAIFAIYFINIYSKKKS"
     gene            complement(18999..19763)
                     /locus_tag="R8X70_000126"
     CDS             complement(18999..19763)
                     /locus_tag="R8X70_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012856140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydro-lyase"
                     /protein_id="HEF2927947.1"
                     /translation="MNPKELREKIAKGEIKEQTSGMALGYAQANLVILPKEYAKDFQT
                     FCMLNPKPCPLLEIVHGKFTQKIAKNANIYTDIPKYFIYENGIKTKEAYDISEYYNDD
                     LIGFLLGCSFSFEEALLEKGLEIRHISNKCNVPMYKTNIACKSVGVFSGEMVVSMRPF
                     TPDNAKKAKEITANFPLVHGAPVQIGNAKEIGINNILKADFGDDPIIKEGEIPVFWAC
                     GVTPQNVIMKAKLPFVITHAPGHMFISDILNSSLKS"
     gene            complement(19772..20737)
                     /locus_tag="R8X70_000127"
     CDS             complement(19772..20737)
                     /locus_tag="R8X70_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEF2927948.1"
                     /translation="MSIKVIEASINSTIQDLGRKNYAKLGIARSGVMDELSLRIANIL
                     LGNKQDEAGLELCLKGGKYEFLDESYFVLSGAEFEAKLNNKKIQTCKVYQAKKGDILE
                     LGLAKIGFRGYLCVAGGFKIKSFLNSKSSDVKMGVGVFNGRALQKDDVLELNNSFIPF
                     NLSKRECENPVFQFAKEPTIRVILGTNDDAFTQNGLNTFLNTSYKIGLKSDRMAIYAE
                     AKTTIEHKNSADIISDPAVFGSIQVPKNGLPIILMAGRQSTGGYTKIASVIENDLPLL
                     AQAKLGTNFKFENISMQNALELYKQREEKFKTLDKKINLDFENLI"
     gene            complement(20718..21458)
                     /gene="pxpB"
                     /locus_tag="R8X70_000128"
     CDS             complement(20718..21458)
                     /gene="pxpB"
                     /locus_tag="R8X70_000128"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEF2927949.1"
                     /translation="MFSVHFSGSKAVLLRFKQEISPQINALVLSTEARIQKGINENEI
                     YGIDELVSAYSSLLIYFNPCVLSLNSLLDFLEKIKKDIKITEKKSNLCIKVPLCYDEE
                     FGLDLEFVCKYHNLSKEELINLHTKPYYLVFMLGFMAGFPYLGGLDERLFTPRLASPR
                     TKIEAGSVGIADKQTGVYPISSPGGWQIIARTPLEFFNKEDEKNPTLLKAGMLLKFKA
                     ISKDEFYDIKEQVLKKAYQKEIYEYKSH"
     gene            complement(21460..22629)
                     /locus_tag="R8X70_000129"
     CDS             complement(21460..22629)
                     /locus_tag="R8X70_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEF2927950.1"
                     /translation="MINKTALLGAAFLMATSAIGPGFLTQTATFTGSLLASFGFVILV
                     SIILDIGAQLNIWRIIGISGKRGTEVANMVLPNLGYFVAFLIALGGFFFNIGNIAGAG
                     LGLNIVLGISVENAAVISAIIAIGIFIFKKAGELMDKFIVLAGFVMIVLTAYVAFASK
                     PPIGEALFRTFIPTQIDVISIVTLVGGTVGGYIVFSGAHRLIDAKLYGKENLNYINKA
                     AVSGIIITGIMRVILFLAVLGVVSSGFILDKENPAGSVFHHALGDLGLKIFGVVLFLA
                     AISSVIGAAYTSVSFIRSFHPWIEKYNRFVVIFFIIVSTLVFYILGKSPASILIIVGT
                     INGWILPVTLFIMIIAAHKKSVVGDYKHPKWMSAFGLLIVALMSYLSVLSMIKLM"
     gene            complement(22651..23421)
                     /locus_tag="R8X70_000130"
     CDS             complement(22651..23421)
                     /locus_tag="R8X70_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HEF2927951.1"
                     /translation="MFKVDLNSDLGESFGVYKMGMDEEILKFVSSVNVACGFHAGDPC
                     VMDKTLNLAKQNNVCIGAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAK
                     DMKIQHFKAHGALYNMAALDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
                     YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKA
                     DSICVHGDGIKALEFVKKIKENLTKEQIQIKALNDFIN"
     gene            complement(23766..24575)
                     /locus_tag="R8X70_000131"
     CDS             complement(23766..24575)
                     /locus_tag="R8X70_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEF2927952.1"
                     /translation="MKKIISLALALALSASAAELRMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKDFVSKGFGVDRTPVMYNDFIII
                     ADKSLAPKFKDKTLKESLELIKNEKLTFISRGDKSGTDNKEKALWKDLGGVPEKESWY
                     QQSGQGMLASIKIAEEKKGVILTDRGTYIKYEANEKGNPNLVIVNEGDDNLKNFYSII
                     ATNPKHCKNVNYTEASKFIKWVTSDKTLNVISEFKLLNKPLFIVDAKTRKD"
     gene            24658..25344
                     /locus_tag="R8X70_000132"
     CDS             24658..25344
                     /locus_tag="R8X70_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2927953.1"
                     /translation="MDYILEGFTQALFLLFNADESVISAIKTTLFSSSISIVLSLIVG
                     FPLGFALGFFEFKLKRFIKLMVDTSLSFPTVAVGLILYALISSRGPLGDLGLLFTVKA
                     LILGQFVLALPIVIALFSNLIENMNKKHFLLIKSLHLSPLKLVMTIIYELRFALVSVV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLIFIAFIL
                     NFIIHKLKRY"
     gene            25345..26340
                     /locus_tag="R8X70_000133"
     CDS             25345..26340
                     /locus_tag="R8X70_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2927954.1"
                     /translation="MIELCNFKFNYGQKNILNIKHLCLDTDKISILMGSNGSGKSTLL
                     RILKFLEGEFDNITYFGNKHLNSDEKRQIYLLFPEPVFLNRSVEKNFYFLLKTYKLDS
                     KEIKKRLNEVLNLLEIDRSLLKKYPSELSSGQGQKIAFALALSVRAKYYLLDEPSAFL
                     DKDTMILFKKAILYMQKTYKSGFLIASHDKNFLDFLAQKKYYLHAGEILEFENTNIFE
                     LENKGVNFSNFIDFSMCKNYICKDEISNKIAIDPYKISFLYPDDFSKQTFDFILQKCI
                     IIALRTRKEFVFIRVECGGKILEFALESERFKQEKLSLYQELCLVFNEEAICFLN"
     gene            26481..28454
                     /gene="acs"
                     /locus_tag="R8X70_000134"
     CDS             26481..28454
                     /gene="acs"
                     /locus_tag="R8X70_000134"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEF2927955.1"
                     /translation="MRYQNTQGLFKPNKQLSRNARIKNLCEYYDLCDEVREDFEGFWK
                     RQALEKIDWFSPFSRVLNDDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAAIVFEGE
                     MGDYEVYTYRRLLHEVCKAANLLKRFGVKKGDRVIIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDKALSEGCESVEKVL
                     IVIRNNEPIEYVKGRDYIYNELVKNESYKCEPEIMDSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQVSKFYTSPTAIRMLHADAPDEPKKYDLNTLEVLGTVGEPINP
                     SAWQWFYENIGNSKCSIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNVKDVAEDGLLCITKPWPSMIRGIWGDENRYIESYFSQAKKEGKPVYFSGDGAFY
                     DDNGYITITGRTDDVVNVAGHRIGTAEIESAIAKHPSVAESAVVSVLDAIKGESLFAF
                     VVLNPTSSCDLGGAIETLKELNDILRAEIGPIAKIEKILYTTGLPKTRSGKIMRRILR
                     TIARGEELKQDISTLEDSGVVQSIIDAAKTGIQ"
     gene            28562..29386
                     /gene="galU"
                     /locus_tag="R8X70_000135"
     CDS             28562..29386
                     /gene="galU"
                     /locus_tag="R8X70_000135"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEF2927956.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKALPKEMLPILTKPLIHYGVDEAL
                     EAGMDNMGFVTGRGKRALEDYFDISYELEHQISGTNKEYLLKDIRSLIHRCTFTFTRQ
                     NEMRGLGDAVLKGRPLAGDEAFGVILADDLCINEEGVNVMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSSYGVIAGNFVEEDLIMVNSMIEKPSPQEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEIQLTDALLTQATNGMVLAYKFKGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            29380..30600
                     /locus_tag="R8X70_000136"
     CDS             29380..30600
                     /locus_tag="R8X70_000136"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEF2927957.1"
                     /translation="MLNNTLFFKESEIRTISSYANRINDEVESGDIGYYHLIDTSLTL
                     IDESLNFIQDKEHVKNIVLVGMGGSSCGVKALRDMLFDEKNNQRELFILDNTSSHSFS
                     RTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFIFITDKDSKLH
                     KEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFIHKK
                     DEILQKAYHYCTHKSASINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTITFLKIKDSQKAPVIPDIHFKFLDDLSNKVNLHDLL
                     NAQCDATMHALIAENLSVDIIELEKLDAWHAGYLMYYYELFTSACGVMLGINTYDQPG
                     VEVGKLILKNILKS"
     gene            30725..31174
                     /locus_tag="R8X70_000137"
     CDS             30725..31174
                     /locus_tag="R8X70_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEF2927958.1"
                     /translation="MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFYSIHEYTEKAY
                     EEMAELFDNCAERALQLGEKAITCQKTLMENAKSPKVEKDCFTPVEVMELIKKDYEYL
                     LAEFKKLNEEAEKASDTTTAAFAQENIAKYEKSLWMLSSALQNTCKM"
     gene            31398..31982
                     /locus_tag="R8X70_000138"
     CDS             31398..31982
                     /locus_tag="R8X70_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
                     /protein_id="HEF2927959.1"
                     /translation="MFKVLTHNIFQKECVIIGKFEPLMAFYFIKRFDLLAHINEDYLD
                     SRGGFRASLFQNKENKEFILAIAGSDLRPLKFDIGDLISDFILLNGKIPKKQFDSLLK
                     FYTLIKKEFCFGKITLVGHSLGGHLAQLFVLDFALEVQNIYTFQAPGIAKKILKDIKN
                     EAYIQKISYHFHTCGDFKKMHGINLILFKICILK"
     gene            32096..33133
                     /locus_tag="R8X70_000139"
     CDS             32096..33133
                     /locus_tag="R8X70_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2927960.1"
                     /translation="MKVLNFFYENHPKFEISYERKVQIPLCNIIIKGPKFSGKKTLIF
                     NYLSQFKPNEILFLNLYDTRFENQSLGHLSNFLEKNVQIKFLCIYNVEFALNLQDIKI
                     PIIISTDKKDLHIEGFQELELDYFDFEEFVSISRKNLPINNLVGLFLQSGRSKLGEKN
                     ILLRQNFNTLELEILKYLALNLGQQISISKLFLELKKKLKTSKDSVYHTIKELENTYI
                     IHPISHDEKKLQKIYFRDFGLRNNLCIQKDFAHLFENLILNELFKFKQEFFYNKFFTF
                     YSKVSKIAYISSPTLDIDLIKLRAKKILSKGLELGIFHVVFITLSSEDSFFEQGVKFE
                     VLPFDKFSLGF"
     gene            complement(33140..33871)
                     /locus_tag="R8X70_000140"
     CDS             complement(33140..33871)
                     /locus_tag="R8X70_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEF2927961.1"
                     /translation="MKRIIIFLSFYLLPLFGNSELKNGFGEEYYKLNVEQKRQIFFVK
                     MNAMFDKSFEEIAKERAFVEAFFYDAYKNGLRNSNQNNLEKLINLKNKYRVENLYDFT
                     EYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKH
                     KIRIFDSLQDSVDSYVLNLNRHFAYEEFRNERAKFESEGKEITGLEAIKTLDSYSERK
                     GYYINIVTKIIQRYDLERYDTPKSF"
     gene            complement(33846..34595)
                     /locus_tag="R8X70_000141"
     CDS             complement(33846..34595)
                     /locus_tag="R8X70_000141"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEF2927962.1"
                     /translation="MKFYKYCASGNDFVIMNASEKKDRSALAKELCNRYEGIGADGFV
                     VILPHKKYDFEWEFYNNDGSTASMCGNGSRAAAHFAHHINGIKPHMAFLTGAGVIKAN
                     VDNNSVEVSLGKIKNIQDAFSECEKNWQLCDTGVPHLVHFCENLDEFDLKLCKQMREK
                     YNTNVNFVKVENDNTLRVRTFERGVEDETQACGTGMGACFYLAFLNKKIHNQARVIPK
                     SGEELSFKFENEELFFKGKVRYCFEANYNFS"
     gene            complement(34592..35197)
                     /locus_tag="R8X70_000142"
     CDS             complement(34592..35197)
                     /locus_tag="R8X70_000142"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEF2927963.1"
                     /translation="MKNAFFVTASIACGKSTFIEIANSLGFKSISADSIAHEILDKYA
                     LELAQIFSKFHKKNLLKAEGKIDRKILGEIVFQNKEAKTILENFTHPKIRAQILEQMQ
                     ILEQENKPFFVEIPLFFESGAYDGLGKVILIYAPKELSLKRIIQRDNLSLEAAKARLD
                     SQMNIEEKLKKADFIIKNIGSYVDFRQECVKVIQNISKGQM"
     gene            35258..36247
                     /locus_tag="R8X70_000143"
     CDS             35258..36247
                     /locus_tag="R8X70_000143"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEF2927964.1"
                     /translation="MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDKVVGGIGSFAGA
                     FRMPSGFKNPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFL
                     DYYATAKLEVEVAKSVVAGIAEGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFEGLKLKFDDKIEGKNLIDVL
                     LEPTRIYVRDFLTLKPYINALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYT
                     IGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEITINEGVVLE"
     gene            complement(36267..37721)
                     /gene="dcuC"
                     /locus_tag="R8X70_000144"
     CDS             complement(36267..37721)
                     /gene="dcuC"
                     /locus_tag="R8X70_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HEF2927965.1"
                     /translation="MPIFMICSTLLAVIVVAYYILKKYNPIFVFFLSGIILLIFAFYI
                     TGTPIPKAPSREHASFLNVLLDSYAFITATFKSQLSGVGLIIMSVAGFAAYMKHINAS
                     AKLAFLANKPLGKIKNKYLILSGTFIVGMALKIVISSYAGLLLLLLACIYPVLISLKI
                     RPITAVCVLSLIALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVMVIAIL
                     IPFYFAWVDKRDKEKGVLNDEVEIPPIIDPKCPTFYILFPWLPVVFLFIAYFFTIKLD
                     VVTANFLSISLVFLVEFARHRNARKLGEDMMVILKAMAEIFISVVSIIIAAGVFAEGI
                     KALGGVNILANAVSNLGTGNFAWFGILLSITVLSFLVYFATVIMGSGIAAFNAFGKLA
                     PDIATKLGVAPITFVLPIEIASCLGRAASPIAGGIIALAGFVKVDPMDIIKRTTPLLL
                     IAMIINIAVAFYLAQTNPLPKEQNSTKIELNRVK"
     gene            37929..40892
                     /gene="cas9"
                     /locus_tag="R8X70_000145"
     CDS             37929..40892
                     /gene="cas9"
                     /locus_tag="R8X70_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790896.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HEF2927966.1"
                     /translation="MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESL
                     ALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPY
                     ELRFRALNELLSKQDFARVILHIAKRRGYDDIKNNGDEEKSEILKAIKQNEEKLVNYQ
                     SVGEYLYKEYFQKFKENSKEFINVRNKKESYERCIAQSFLKDELKLIFQKQREFGFSF
                     SKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLN
                     NLKNTEGILYTKDDLNTLLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKK
                     YKEFIKALGEHNLSQDNLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKD
                     HLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNP
                     VVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDA
                     ELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRS
                     FDDSYMNKVLVFTKQNQEKLNKTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNY
                     KDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAK
                     SGMLTSALRHTWGFSTKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELY
                     AKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEF
                     YQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFAL
                     KVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPELVYFNAFTS
                     STVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVT
                     KAEFRQREDFKNELR"
     gene            40879..41769
                     /gene="cas1"
                     /locus_tag="R8X70_000146"
     CDS             40879..41769
                     /gene="cas1"
                     /locus_tag="R8X70_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HEF2927967.1"
                     /translation="MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINII
                     VLESLQASLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSA
                     QKKAILWQKIIKNKILNQAFILKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYF
                     KTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALC
                     DDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYV
                     ANFKNALLYEDELKIVKFDD"
     gene            41762..42193
                     /gene="cas2"
                     /locus_tag="R8X70_000147"
     CDS             41762..42193
                     /gene="cas2"
                     /locus_tag="R8X70_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HEF2927968.1"
                     /translation="MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFS
                     VYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNE
                     TNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF"
     repeat_region   42337..42703
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=42337..42372
                     /rpt_unit_seq="attttaccataaagaaatttaaaaagggactaaaac"
     gene            complement(42820..44010)
                     /locus_tag="R8X70_000148"
     CDS             complement(42820..44010)
                     /locus_tag="R8X70_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEF2927969.1"
                     /translation="MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKN
                     QPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSD
                     TLVPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAEL
                     GFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFP
                     LLKDDEKATFSTLESALQSCDILITTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDI
                     IFMP"
     gene            complement(44014..44460)
                     /locus_tag="R8X70_000149"
     CDS             complement(44014..44460)
                     /locus_tag="R8X70_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEF2927970.1"
                     /translation="MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGG
                     IEALSFDIYEPLLKKWFDEWQKRVDFDGISLLFAHSIGDVAVHESSYFAGILSKQRKL
                     GLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG"
     gene            complement(44461..44682)
                     /locus_tag="R8X70_000150"
     CDS             complement(44461..44682)
                     /locus_tag="R8X70_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEF2927971.1"
                     /translation="MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAV
                     SLNDEIIFDKNTKLKTGDKIALLPPVCGG"
     gene            complement(44684..46225)
                     /gene="cueO"
                     /locus_tag="R8X70_000151"
     CDS             complement(44684..46225)
                     /gene="cueO"
                     /locus_tag="R8X70_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HEF2927972.1"
                     /translation="MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTS
                     FINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKT
                     LFYTYNGLIPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAG
                     EERIYRFEIPQDSAGTYWYHPHPHYTTSKQVFMGLAGAFVIKAKKDALSHLKERDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN
                     LRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDK
                     MMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGK
                     SEGELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            46338..47486
                     /gene="nspC"
                     /locus_tag="R8X70_000152"
     CDS             46338..47486
                     /gene="nspC"
                     /locus_tag="R8X70_000152"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HEF2927973.1"
                     /translation="MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFA
                     FSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEMSEIAHLSHHIVF
                     NSLYQFDKFKSLCANNSLGLRCNLEFSFAPKELYNPCGKYSRLGILSKDLENFDLSGV
                     EGLHFHALCEESADALEAVLKVFEEKFGKWIKQMKWVNFGGGHHITKQGYDIRKIITL
                     CKNFSDKYGVQVYLEPGEAVGWQSGVLVASIVDIVENEKRIAILDTSSEAHMPDTIIM
                     PYTSEVLNARILATRENEKISDFKENEFAYLLTGNTCLAGDVMGEYAFKEELKRGDRV
                     VFLDQIHYSIVKNTTFNGIRLPNLMLLNSKNELEMVREFSYKDYALRN"
BASE COUNT        15753 a         7203 c         7638 g        17010 t
ORIGIN      
        1 agtttttact tgaaataata aagttaagat ataaaagtta attttaaaat ttctatagtt
       61 actatttaga tgttgtatat tttaaaaatg caaacttaaa atattagcat aataaggata
      121 tttgaattta taacaatttt cattaataat gcaaattatc gtttatagtt aaatattaca
      181 atgcctactt aaaaattttg aaactaggag tttgtaatga aaaaatatat tagtagctgt
      241 ttggctattt gttgtttaag tagtgctatt tatgcaaatg atgtaaaata tgatgcacaa
      301 aaaatagcgg atatttttta tcaactcaat gcggatccta aaaatcccaa agtaaaagtt
      361 aatcatgcaa aaggtttttg tgctatggga acttttgagc cagcacaatc tattaataaa
      421 gaaattgatg tgcctttatt gacatacaaa agtttaccaa ttcaagtaag gtattcttta
      481 ggtggagctt ttaaagatga taaaagcaaa acaagaggca tggctattag aattactgat
      541 cctcaagatt ctgcttcttg gactatggtt atgttaaata cagaaataaa ttttgcaaaa
      601 aatcctaaag aatttggtca gttttttgaa atgagacttc ctgtaaatgg taaagttgat
      661 caagaaaaaa taagtaaaat aatgcaagag gttgattcct atagaaattt tgctgcatat
      721 actgataaaa ttggtattag taaaagtgta gcaaatactc cattttttag catacatact
      781 ttctatttta agcaaacagg gagtgaaaac tatttgccag caagatggaa attagttcca
      841 agtgaaggtg tggcgtattt aaatgaggca caaatgaaaa gtgcaagtag tgatttttta
      901 aaagaagatt tcgaagatcg cgtaaagact aataagccag tagaatataa aatgtattta
      961 gtatatgcaa ataaaaatga tattattaat gaaacgacag ctttatggag tggtaagcat
     1021 aaagaaagct tagttggaac ttttaaagtt aatgctttga gtgatgaaga ttgtaatttt
     1081 gatgtatatt tcccttcaga tgtacctcaa ggagtaaatc cgccacaaga tcctttgttc
     1141 gatgtaagaa acgaggctta tgctatcact tttggcatgc gtcaataaat ctttactttc
     1201 aagggttaaa gtcttttaag aatttatact gttttgccaa agcttgtctt aagattaagc
     1261 tttggggatt cattttttta tgtttgtgaa aaatataggt tttatgagat ataaaataca
     1321 agtgataatt tagtattttt gaaatataaa aatgtgattt tagagtaaaa atataaaaat
     1381 aattaaccct agtattctat ataatattta cacttatact ttataattta gtaaatacta
     1441 aaaaaggaaa aaaatgaaaa ctttaatcat tttcgcacat acattttggg aagattctaa
     1501 ggcaaataag gctttgtttg aaagcattaa aaattcaaaa caagtacaaa ttcacaatct
     1561 tagcgaaatt tacaaagagg gtaaaatcga tgtcagtaaa gaaatggctt tgttaaaaaa
     1621 tgccgataaa atcatctttc aatttccact tttttggttt agcactccag cgcttttaaa
     1681 agagtggcaa gatagggttt taacagcaat tctttatgga gaaaataaag aacttttaaa
     1741 agataaaaaa tttcagattg taacgacttt aggcggcgcg caagagagtt atgatgggca
     1801 tcatggtgcg actttagaag agcttttaaa gccgatttgt tatgcatttg aatatctagg
     1861 atgtaagagt ttaaagcctt ttgcaatctt tagtgcagat gcaaataagc ttgatttaaa
     1921 agcttatcaa gacgctataa gtcaaaattc agggtgttct taaatacttt ttataaattt
     1981 aagaaaatgc ttacaactta caaaaaattt ctaaaactct agcaatataa aaagcttgaa
     2041 tttaaggtga ttgatcgcct taaatttttt aattaaattt taatcctcaa aatttctaag
     2101 caagggataa atttttattt tttataaaca ctgaactaat atttatagta taattttttc
     2161 caaattttat gtatcaaatt ggcgatataa aggaagataa aatgacttat gacatagcgg
     2221 ttattggaag tggtagtgtg gggagttttg ctgggtatta tgcggctaaa atgggcttaa
     2281 aaacctgtct tatcgataaa tttcaagcac ctcatactca aggttcttat catggtgata
     2341 caaggatttt tcgtatagct tatggcgagg gtgaaaagta tataccgctt ttacaagagg
     2401 catacacgct ttggggagaa tttgaaaagg agcaaaatac caagcttttt gagcgttgtg
     2461 ggcttttaaa tatcggctca aattctactt ttatgcaaaa tgtgctctca agtgtgaaaa
     2521 attacgatct taaagcaaaa attctaaatg ccaaagaatt gcaagaaaat tataatattt
     2581 gcgtatcaga tgattttttc ggcgtgttag aaacagatac aggctttgtg tatagtgatt
     2641 tgagtgtaaa aagtgctatc aatgctgctt gcaagcttgg tgcgcatact ttgtgtgatg
     2701 aaatcgtgcg catatgcaaa gaaaatggag tgtataaaat acaaacacaa aattccagca
     2761 tacaagcaaa acaaattcta atcagtgcag gaagttatgt caatgaagta ttgggcgtgt
     2821 gtgaatttga cttgccaaaa gtgcctgtgg gcattagacg caaagtggtg aattggtttg
     2881 atacggattc ttataaactc tcacaaggtt ttccagcgtt tatactcgaa tttgaagacg
     2941 attattttta tggttttcct gattttgcag atggattaaa agtgggtaga gataaagtag
     3001 gggagatcat tagcacccgc gaagaacgcg tggaatttgg atcttatgag caagatactc
     3061 ttgatatagg caagcatatc aaagaatttt ttcctgattt aaaagatttt agcaagggca
     3121 gtgtatgcac ctatccttta agtcctgatg atgattttat catcgatttt ttagatgaaa
     3181 atctcttttt tatgggtggg cttagtcatg ggtttaaatt cgctcccgca cttggacttt
     3241 taggcgtgaa agcattgcag actcaaaagc tagatccgag tataaagcag tattttagcc
     3301 taaagcgttt tggataaagc tgtataaccc ttatatttaa gggttattta atacgctcta
     3361 attcttctat aaccaaaggc aaatctttaa agccttcgct ttccataaaa tgtccaccat
     3421 ttggagtttg tatgaattta gcatttagct ttttggctaa attttcactc acccaaattg
     3481 gcacgacttt atcgtctttt gcgctgatga tgattttgtg aattatcatg ttatcaagct
     3541 ttttatagtc taattttggc tttataaaat catttaaaat aggcaatttt gccaaaggtt
     3601 catcaaaggg tgcaaccatt attacaccgc cgattttagt cctttcatca agcgaattta
     3661 aaaaatcaag caccgcaact ccacctaaag aatgcgtgat aaaaaaggta ttttcatcaa
     3721 gttttgtgaa attttgactc atggtttgca tccactcatc aagcttaggc gaaaaagcat
     3781 tagggaaact taaaagtaaa acttcatgat ttttagcttt taaattcttt gctacacttg
     3841 gtaaaaatcc gtaattctca tcgctgccat agccatgcac gatataaatt tgcttagcaa
     3901 aaacaaagct aatgcaaaga caaagcaaaa agatgatttt tttcataagt gtcctttcta
     3961 aaattcagta gtttagataa tattttgtat tttttgcaaa agctcattgg ctttttcttg
     4021 atttgccttt aaagtactta ggatttcttc tacttcacgc aaggtttttt cttccttgga
     4081 atttggattt ttagcactta gatcatagtt tctttcttca agttctttta tgctaactag
     4141 ataagaatga ggagtgattt ttctttcctt atagattttt aaaaattcct caaaatgtgc
     4201 gtattctaaa ggcttgtttt tggtgagttt aaaaggtggt ataagctcat aataatacac
     4261 cttatcatct tcaccacaaa tgcttctttt tccttttgag aaaaaaagca cattggtttt
     4321 taccgcacta taaggtaaaa ataccccgct tggcaagctt aaaacgcatt cgagattgaa
     4381 attttctagc aagtcttttt tcacgcttac aaaggcattt gaattttgaa aaagcacgcc
     4441 ctcaggcact attatagcac atcttccgtt gttgtttaaa gattttaaga tatgttgtaa
     4501 aaataaaagc tcagtagcgt ttgattttac gggaaagttg ttttgaattt gttctttttc
     4561 cttgcctcca aagggtggat ttgccaaaat cacttcatat ttttcgcttt gggttatgtc
     4621 tgtgattttt ttatttagag tgtttgtttt gatgatattt ggagatttta cctcgtgcaa
     4681 gatcatattc atcacgccca ttgcgtagct tagtggggtt ttttctttgc caaataatgc
     4741 atcattttgt aaaaattcaa gctcttctac gcttaaattt gcttttttgt ttttattcct
     4801 gtcttcatac aagatatgca aaaagctttc tactaaaaac ccacaactcc cacaagcagg
     4861 atcataaatc ctttcttttg ctttaggatc tatcacttct accatagctc ttatcaaagg
     4921 gcgtggcgtg taaaattctc cactatttcc cccatcgctt cccatatctt ttaaaagctt
     4981 ttcataaact tcacctaagg caaatacatc actttcttta ctaaagctta gctcatcgac
     5041 taaatttata acctctctta aggtgtgtcc attggctatg cgattgtcta taaactcgaa
     5101 aattccgcct attttatact ctatgctttt gaaattttca ttatctttaa agctttttag
     5161 atatggaaaa agctcgttat ttacaaagct aagcaaatca tctccgctta aagcattttt
     5221 tacatcaagt ttgccttcac ttgtttttgg agctgcccat attctccagc tgaatttttc
     5281 ttctaaaatg cttttatatg ctttatcatt taagatagct tctagtttta attcttcttc
     5341 ataatcatct aaaaatttta aaaacaatat ccagctgatt tgctcactat agtgcatcgc
     5401 accgcttata ccatcatcgc gtcttagtat gtctgtgatt ttgtcgattt tattttgcat
     5461 ttaaaaaatt ccctttttaa aaagtcttaa aagttctata tttatataat aatgatttct
     5521 acctatttta atgcattcta atacccctaa attttcacaa attttaagat attttgaggc
     5581 actttgccta gaaatattta atttttctat caaaaaatct atctttgtat aaggatgaga
     5641 aaacaaaagc tctacaaagt ctttactata aaaattggtt ttattttgca aaatttcgct
     5701 tacatttagc atcatttttt ctatcgtggc aatagtttca atagttttta tagcagtttg
     5761 ctctacgcct tttagtatgt attctatcca ttctaaaatc gctctttcat ctcgcacttt
     5821 ttgcaaaaga ctataatact cccctttatt ttttacaata taagcactca aatataagat
     5881 aggcaaatca agcaagcctt tataaaccaa ataaagtata tttataatcc tgcctgttct
     5941 gccattgcca tcataaaatg gatgaatgct ttcaaattga taatgaatga ttgccatttt
     6001 tactaaaaaa tctagttcat ctaaagtatc atcgttaatg tattgctcta aatttctcat
     6061 aagctcttgt atgtcgctat gattttgtgg gggtatgtgt ttgatttctc ctgtgatagg
     6121 gtttttaagc attgtgccac tttgttttct aaagcctgca ttgtttcttt ctaatctttt
     6181 ttgaatttct aaaatatgtg catttctcaa caaacgctct ttttttaaaa gctcataccc
     6241 ttttttcaaa gcattttcat agtcttttac ttcttttgct gctcttgtaa gtttgctttc
     6301 atcgatttga gataaaaaaa gttcatcatg ggttgtgatt atgttttcta tctcactcga
     6361 atcttttgct tcttgcaaaa ttaaagcatt gattaaaatg tttggattag ggatactttt
     6421 gctaagtcca ttgagttctg ctaattttct tgaagccttg atgataaggc tgtaaatatt
     6481 tgaatttaat tctatattta gaggtagttt tggcggtatg aattctttca tgatttttcc
     6541 atatgttaaa atttctaaaa aattttaaca ttataaaaaa atatgttaaa aaaatcaaaa
     6601 atttttaaca tattaagcca atgtgttaaa atttggcaaa ttttttaaca ttataattct
     6661 cccttaaaag ctttattaag caaggattgc ttaagctctt cataatcttt tagttcttta
     6721 gtgtaaagct cttttaaagc ctttgtcttt tcaaagacaa aatctaaatg ctttgcgatt
     6781 tgctcttgct ctttgagtgg gggtaggggg atttgtaggg atttaaattt tggtatagta
     6841 agttgcggaa tactagaacc ttcacctttt gctataaaaa aattcaaaca aaaatataaa
     6901 taatgtaagc ataatatatt ttcacaagga attaaagaaa taagccttac aataggaaaa
     6961 taaggttctt ttctaatgca aacaaaacct attgttcctc tagcagatat agttaaagaa
     7021 ggttttataa tggtagcttt atctgtatat ccaactaaac cattattatt tacaccattt
     7081 gcataaacag ggatttgatt tttggcagtt ttactttctg tgcagttttt tggcttatct
     7141 ccacccgcag aaatattttc gctaatctct tctaagcttt tccattccca agattgcggg
     7201 agttgataat tttctttagt attgtcgtta agtggattaa aagccttttg caaagcactt
     7261 tgcataagct catcaatatt tgctaaattt tcttttgctt ttttgatatt ttcatcaatc
     7321 ttactaaaag caaaatccaa aatccccact atcctttctt gctctttgag cggcggtaac
     7381 ggaatttcga tttgtttaag aatttttaca ctagctatat ttttgattgc tgaacctaag
     7441 gtggattcta aaattttctc ttgcattatt ggagaattaa aataataaat aaaataacta
     7501 tttaagattt ttatattatt aagccttatt tttaaaagtg cttgatttat aatccccatt
     7561 tctgtatctt tgggtaattc tactattttt cccaaagttc cagaacagct aattagtagg
     7621 tcgccttctg ttgccttaaa cgcttctaat tcttgaaatt tttcatgcga aataaaatat
     7681 cttttccaat gtggatcatt gtttatagga ttatattgtt caaaaattct aatacccttt
     7741 tctacaaaaa agcttttttt taaagcactt ccaaatggcc ctctttttat agagtattta
     7801 tcacttgata atatttcacc aagtgtttcc attttccaac cctgcggtaa atttgtcatt
     7861 gtattgcctt tttctattta tttacctatg cttttaacta acgctttata ttgttgttta
     7921 tcattttgtt ttattgtttc taaaataaat tcagctattt ttttagcttc ttctatatca
     7981 ataggttgca ttcctctgct aagtatctct cttaaatgtg agtattcatt ttgataccta
     8041 tttataatac ttgctaccat tttttgatga ttttcatcaa tcctatcact ttgatatgta
     8101 tcattaaaaa atcttttgat taattcttta tctaaactct taatttcatt tggatattta
     8161 aaaaataaat aaatctcaag aaattttctt aaattatttc caaaattata aacaagagaa
     8221 atttaaatct tcattatatg tatcatcaat atttttaaac ttataaattt gttcaaaaag
     8281 ataattaaat tctgttgtat atctttctaa acatttaggt aattttttaa tttcacttgt
     8341 ttctatactt tttttaacac ccctttcaat aaaatagtat tgtgggaatt cgtacttttt
     8401 ttactatttt cattttgctt aggtttgatt tttttaacct cttcgtatat tttaaaaaat
     8461 ctaaattatg cgtagatata aaaaattgct caaaagaatt ttttcttact atttcattct
     8521 ctatcacaga aaatataaaa aatatatgat tattatcaag gctagagata ggatcgtcta
     8581 tccatattat aggattttta tctttggtgt ttgcatcttt taaacttgcc acaaaataac
     8641 aaaaagcaat taaactacac tcaccctcac ttaaattctt agcttgcttg ccatttctta
     8701 aaatttcaaa ttctccattt aattgtcctt tgtcatcttt ttttactttt aactctagca
     8761 tattatgtcc aaaatatgat tttaaatatt tgtttatatt gcttgtagaa gtttctagat
     8821 tactaagttt ttctttatat ttttctattt caaggttgta gttatttatt tcattttttt
     8881 ctgtctcaat agtactttgc atattgctta gtttttggcc taagttttta atttcatctt
     8941 gtttagcaaa acaatcacta tctttagcaa attttgctac ttcatttagt cttagttttt
     9001 ttcttgcttc atcttgcttt gataataaat tttttgcgta ttcgttattt tctttacata
     9061 aattttcaat tttatttaat atctgcaata tctcatctga aaaatcattt atgttttcta
     9121 atttcatagg tgtaaaaaca tcttttttct tttttgttaa tttttttcta tttttaacaa
     9181 ctcttcgttg taatttgcaa tacttactcc tagctgttct ttcaagccaa taaaaatatc
     9241 tttatagtta gaataaaaat tttcatattc aatacctagc aataattttt ttgattctag
     9301 cttatagctt tcaaaattat ctagtaaatc ttttaattct ttttcaattt gttctttttc
     9361 tccgctatca tcttttatgt tattttcaat ccaagctatt ctttctagtg ttaaagggtt
     9421 attgcaaaat ttacattgct gtgtaaatga atgctctttg tgaaattcca aaccctcttc
     9481 tagccatttt ctcaattcgc ttgttaaatt ttctttaatg ataacttctt tttcaagaat
     9541 ctttaatgaa tatgtgaaaa taccttgaaa attatcttta ttaaaagtat ttttgaaaat
     9601 tatattttgt ttttctttat cttctaagat ttttataagt tgattttgtt cttcattgtt
     9661 aagaatataa gcatttatat tatctttaat ttctattaaa tcattttcta aatttctttt
     9721 atcataatta ctgccctgtt ttattaaatt tggttcactt tttactaact tagctttatc
     9781 tataagcttt tcgtttaaag tttttatttt ggcttgttgt gttttagaaa tattttcccg
     9841 attggcttgt atatctttta atttttcatt tcttgttttt aaaatttcct ttcttttttc
     9901 aatactttct tttatatctt tttgctccac acctatactt ttaaaacctt ttatattccc
     9961 ttttttatca tatagataat ttaaattttc ctttacaaaa tcactattat aaactctaat
    10021 atctagatta gaatttataa catcattttg ggttaaaaaa ctaccatctt ctagttttat
    10081 tttaaaattt ccatctaaaa aatcttcatt atgtttttta agctcaaagc ttctagctat
    10141 ccttgaaagt gtcgttttac ctgaataatt tctgccataa aaaatattga ttgttttaaa
    10201 ttcttcaaga ccattatccc atgtaaaatt ttcataagag ccaaaattta ttttatcaaa
    10261 ttttaagatt ttcatttttt acctcgcata aatttccctt tgcaaatcat ctacgctttg
    10321 ctttaaattc tccaccccgc caaattcact gactatttct tttacattgc ctaaagagct
    10381 aagctctatc aaaggagcca agcttctatc aaaatctttt atgccgtatt gctgatatct
    10441 accgagtaaa aattctatga atttcagagc tttttctttt tggaagcgtt ttaaaaattc
    10501 actcttttct acttgtaaaa cgcgttcttg tcttgttttg atctcagcat taaaactcaa
    10561 atgtgccaaa acatcatata tatcacaatc ctttttatca aaaatttcac ccaaatcttt
    10621 caaggcattt tcatccactc catctttttc aagggttttt aagaaattca gcctagtttc
    10681 ttgcttgctc caaatttcac gaagttttac ttcatcgtcg tagtattctg ctagcttgcc
    10741 tatcaaaaat tctaaaaatt ctttagtgct aagtggtttg ccattacttc ctagatagct
    10801 tgtgtttatg tcaagcactt tgagttttgt gccttttaaa tgcacggtga ttgctttttt
    10861 gctttctgtt tcttttgttt tgtctgattc ttttttattt tgcttgcccc aaatttcgct
    10921 tttatcttct ttatcttcat ctttgacttg ttcgccatcc cattttggat cataaaataa
    10981 ctttgtcgca cctacaaaat ctatgatggt aaaaaagtct tttccttcat acactctagt
    11041 gcctcgccct atgatttgtt taaattctat gatagagcct atatttgcca aaagtactat
    11101 attgcggaca tttctagcat ctacgcctgt ggttagcatt ttagagcttg taaggattac
    11161 aggatagctt ttgtcattgt cttgaaattg ttttaaatat tcaagtccta tcttaccctc
    11221 atcgctcgta actcttacac aataatcatc tcttttaaca cttttaaatt tatcaatagc
    11281 tctttttata tcgcttgcgt gagcttgatt ggcacaaaag atgatggttt tatccatagg
    11341 atctataagt tttaaaattt ctttagctag aaaatcatta tattgaggta gatggatatt
    11401 tctttcaaat tcactcattt tataaaatcc tttttctagc tctccttcta tgagatcatc
    11461 aggattatat acatagcctt cgctaagtgt ggtggtgatg cgttttacct tataaggggt
    11521 taaaaatcca tcttctatac cctcttttag gctatactca tacgcacttt caccaaaata
    11581 cctgtaagtg tctacattat cactcttttt aggtgtggca gtaagtccta aatgagtagc
    11641 tgatgaaaag tgctctagta cgcacgccca gtttccttct tcgtttgctc cgcctctgtg
    11701 acactcatcg atgatgataa ggtcaaaaaa atcttttggg tattgtagat aaaatttgct
    11761 ctcttgttct tcttgggtat tttcttgatc tttagaattt gcagctagac tttgataaat
    11821 tccaaagaaa acatttgcgt tggtgatgat ttttccatca ttttttctaa tctcttctgc
    11881 gctgattact ttacaatcgc tttctactgc gttaaattct cccaaagctt gatctcttaa
    11941 gctcactcta tcgcataaaa acaatatttt aggtttttgg tctttgtttt ctttattcca
    12001 tcttgcttca agcaaacgat aacacaaagc aaaagctata gtcgtcttac ctgtgccggt
    12061 agcaagggta agtaaaattc tatctttacc attgattaaa gcttctatga ctttatctac
    12121 ggctattttt tggtagtatc ttaatgtttt ttgaggtatg tataattctc tttgagttaa
    12181 aagtttgtat tgccattctt ttaaatttcc ataaactctt tgaaaaagtt cgttagggct
    12241 tggaaaattt tctatatact caccccttga aacccttaaa tcatactcat aaattttatc
    12301 gccattagtg ctataaacaa aaggcacatt taaagtttta gcgtattcta taccttgaga
    12361 taagccatct aaggcgtctt tgttttgttt tttagcttct atgatggcaa gattgttgtt
    12421 ttgaaatttg agcaaataat ctgcaaattt tctttcagct cttttgttgc ctatgagttt
    12481 gcgtccatcg gtgaaataat aattccttat gatattttct tcactccaag aactagcata
    12541 aagctttgcg tctataagct taacccttgt atcatcttct gaatataaat tttgcatttt
    12601 taccccaaag tgaaattaaa ttttgtaatt ataacattta taataaattt ttaaaaaatt
    12661 taatttccct cttgacttat agctactcta atgttttata atttcaaaaa tcaaaaaata
    12721 aggagagaaa atggactcta aaatcttttt agaaaatggt cgcattcaaa gcaagggcta
    12781 tgctatgctt agcaaagatg cgaaattcac accctttgaa ttcacacgcc acgctgtggg
    12841 tgataatgat attttgatta aaattttata cgcaggaatt tgtcatagcg acatccacac
    12901 tgcaagaagc gagtggggag aagctgtgta tccttgtgtg ccagggcatg agatagcggg
    12961 agaagtgatc gcagtgggta aaaatgtgag caaatttaaa gtaggggatt atgcaggggt
    13021 tggctgtatg gtaaattcat gcggagaatg cgaagcatgc aaaaaatccc aagagcaatt
    13081 ttgcgaaaaa ggacaaacca tctatactta caatagctgc gatatttttc atgataatga
    13141 aaacacctat ggaggctact caaacaacat agtcgtaagt gaaaaatttg ctgtttgtgt
    13201 gccaaaagat gcaccgatgg aaaaagtcgc gcctttgctt tgtgcaggaa ttaccactta
    13261 ttctccgctt aaattttcaa acattaaagc tggctcaagc gtagcagtag caggatttgg
    13321 cggacttggt atgatggcgg ttaaatatgc tgtgaaaatg ggtgcaaaag taagtgtttt
    13381 tgctagaaat gaaaacaaaa aagccgatgc tttggctatg ggcgtgagtt ctttttatac
    13441 aagcacagat aaaaatgctg taaaagaacg ctttgatctt atcatttcta ccatcccaac
    13501 tccttatgat cctagtgctt atatggattt gcttaaattt ggcggtgaaa tggcgatagt
    13561 gggcttgcca cctcacgaag ttgctccaag tatcagcgtg ataacctttg tgcataaagc
    13621 gggtaaaaaa gtctatggtt cactaatcgg cggaatcgca gaaactcaag aaatgcttga
    13681 tttttcttta aagcataaaa tttaccctga aaccgaactc atcacttcaa aagatatcga
    13741 caaagcttat gaaaatctca cttcaggaaa agcaaaattc cgctatgtga tcgatatgag
    13801 agatgagtaa ttaatactta tcaaaaacta tatcgctaat gtcaaaacct ttttgcttag
    13861 cgatatctaa aagtttatct atctcttttt tatcgatgat ttttctagat aaaatccaaa
    13921 gatactcttt atcaggactt ccaacgacag cgacttcata gtttgtgtct ataaagagaa
    13981 tttcataatt tgttttatta aataaattca taaaaatgct aaatttcacc gataaagctc
    14041 ttggggattt tactttggct ttgccttgta cttgcgaaac ctctccatct tttttaacac
    14101 agatattttt tatatttaca acaggggtag agccttcgta ttctagttga tattcagctt
    14161 tagactgaac gcaagatttt tgaaaaaatg caggttttct agccatttca agccaagttc
    14221 ccatatattt ttctaaatta acatctccta taagttctat catgatatcc tccttttgtt
    14281 ttttgaaata ttctttatat ctgattaaat catcacttta tgtattgaca ttataacttg
    14341 cataaattaa aattgcgagt ttaatttttc gaaaaaggtt tttttaatgc aacaatcaag
    14401 tataactata aacaatactt atcaaatcaa gatcttaatc acgctttgtc taggtgtgtt
    14461 tgggcttatc agtatggagc ttggggtgat ggggatcata ccgcttatat cggagaaatt
    14521 tggcgtgagt gttagtgatg cggggtggag tgtgagtata tttgcactta ttgtaatgtg
    14581 ctgtgcgcct atagcaccta tgctttgtgc gaattttaat cctaaaaagc ttatgttatt
    14641 ttgcttggct attttttctc ttagctcttt ggcaagcatg tttgtaaatg atttttggct
    14701 tcatttgatc ttaagagcta tccctgcttt ttttcatcct atttatcttg cacttgcttt
    14761 tagcacagcc gcaaatttag cagatgataa aagtaaagta ccccatatag tcgcaaagat
    14821 ttttatggct attagcgcag gtttggttct tggtgtgccc cttagtagtt attttggtgg
    14881 gaattttagc tttgaaatgg cgatggcttt ttatgtggtg atcaattctt tagcgttttt
    14941 tatcactttg ttttttatgc ctgaatttaa aaagacaagt aggataaagg taggaaaaca
    15001 gcttttaagt ctaagatatg cgcttttgtg gatttctatg cttgctgttt tttgtatttc
    15061 gactggatat ttaggatttt attcttatta ttctgaattt ttatttagcg tgagtaaaat
    15121 gagctttaca aatatcagtt tagcactttt tatttatggt tttgcaagta ttattggtaa
    15181 taatatcgca ggaaaaactt tagtcaatca ctcaaatcaa acgcttatat ttgcttctat
    15241 ggcaatgatt ttgatatatg ctttgatttt tgtaaatgca gcgcaatttg caatcatgct
    15301 tacattaagt ttgattttgg gaattgtaaa tggggttatg aataatgcaa tgcattatat
    15361 catcactttt cctttcccta gggcaaaaga ttttaccaat gggcttttta taagtgtttc
    15421 aaatatttct atcagcgtag gtgctactct ttgtggctta gtcatttcta taaaagaaac
    15481 taaatacatt gcgataagtt ctatcatcat ggtgggctta gggcttattt tggtattggt
    15541 tagaatgaga ttagaagata aaaaattaaa aatttaaaag aatctaggct gaaatcccaa
    15601 ccatctttag tggttgggct gaaagcctat ccttgatttt ctatatattt tttgatagtt
    15661 tcaggggtag cttcgccaac cgaacaagcg aagtacccat cgctccaaaa tgttttttct
    15721 ttccaaaaat ttctgcaaag taaatgataa aatctcttat cttgccaaat tctaaaagta
    15781 gtaatctgct taatttttct tataatttga gttattgaaa cttttggcaa gtattgcacc
    15841 attaagtgta aatggtctat atcgctttcc attgctatta tattaaaatc actagcattg
    15901 gctattttat caataatagc cttaatttcg tcatttagta atcctactaa aagctttttt
    15961 ctatacttac atactaaaat taagtgggct tttagattat gcttacttct atttgttgaa
    16021 atatagccgt gaagtttata attatttttt ctcatttttc ttgccttttt tatatatttt
    16081 agatataatt atacaaaaat attaagaaaa agagaaatgc taagagctgt aaaatataga
    16141 atttacccaa ataaagcaca acaagagctt attttaaagc actttggttg tgctagattt
    16201 gtttataatc attttctaaa ttatagacaa gagcgatatg ctcttggcat aaaagaaact
    16261 tattttacta tgcaatcaaa gcttactgag cttaaaaaag aacatacttt tttaagtgaa
    16321 tgtaattctc aaagcttaca aatggctctt agacagttag ttactgcctt tgataatttt
    16381 ttttctaaaa gagccaaata tcctagatat aaatctagaa aatatagtaa acaaagcttt
    16441 gctattccac agaatataaa gctaagtaaa aatagagtta tcttgccgaa attcaaagaa
    16501 ggcattaaag ctaaaattca taaaatccta agtaatgatt gtgtgataaa acaagctttc
    16561 attagttgtg tagcaggaaa ttactatgtt tctcttagct atgaggataa taaatctata
    16621 cctaagccag tagagataaa atcagctgtt ggtttagata tgggtttaga aaacttactt
    16681 attagaagtg ataaaatagt ctacgaaaat aagaagtttt tacaaaataa agaagctaaa
    16741 ctcataaagc tacaaaaagc cgtttcaaaa aagaaaaaag gctcaaataa tagagcaaag
    16801 gctattaaaa aactagctat tgctcatcat agagttgttc tagcaagaga tgactatttg
    16861 cataaaatca ctaatgagat aaccaatgat tatgatttta tagcgataga aaatctaaat
    16921 gtaaaaggac ttataagaaa taaacattta tcaaaaagca tagcaaatgt aagttggcat
    16981 aagctaatat ctatgctaac ttacaaagca gagctaaaag gaaaaactct aatgcaaata
    17041 gataagtttt tccctagttc tcaaatatgc tctaattgtg gagtaaatac tggcaaaaaa
    17101 gctctaaata tcagagcttt tacttgccct aattgtaata cataccacaa tagagatata
    17161 aatgctagta taaatataag aaattatgct cttggtatgc ttgatgatag aagtagagta
    17221 aaaatagata aatttagggt tggaatcacc cgaagttacg cttgtggaga tagctcttgt
    17281 gggactagca aatacggtaa aatatttgct agttagcaat ctatcgttga aacaagaagc
    17341 ccacctatct tttagtaggt gggtgattca cttataaagg agaaaagatg aaaaatatac
    17401 ttttattaaa tggagcaaaa agtttcggac attcaggcgg caagctcaat gatactttgc
    17461 acgaagtggc aaaagaaagc cttttgaatt tgggattaaa ggtcgatgaa acctatatcg
    17521 ataagggata tgatatagaa aatgaagttg caaagatact taatgctgat gcgatcatct
    17581 atcaaatgcc aggatggtgg atgggtgagc cttggatagt gaaaaaatac attgatgagg
    17641 tttttactgc agggcatgga aaattttatg caaacgatgg tagaagtaga gaagatgcaa
    17701 gtaaaaaata tggcagcggc ggacttgtaa ataataaaaa atatatgttt agccttactt
    17761 ggaatgcacc acttgaagcc tttaatgata aagatcagtt ttttgaaggt gtgggcgtag
    17821 atggagtgta tttgcattta cacaaagcaa atcagttttt aggtatgaag cctttgccga
    17881 cttttatttg caatgatgtg atgaaaaatc cacaagtaga aaaatacatc gaggattata
    17941 aagcgcattt gcaaaaagtg tttagctaag ctaaatagca aatgtaaaat ttgcaccatt
    18001 tcatagatga ttttaaataa acattaattc atgctgggtt attatttaac ctagcatttt
    18061 gatatcataa aaacattctt atttatttca aaggtagtat aaatggatcg ttcaaaatat
    18121 ttatttatct tgcttgttat tgctatgttt ttatggggtt cttcatggcc gacatctaag
    18181 attttggcga actatacaga tacttctatt attaccttct ggcgtttttt ctttgttgta
    18241 ttgggttcat tttttgtttt aagcttttta aaaattcctc ttagacttga aaaaaatgct
    18301 ttaaaatggg tcttgatagc aggagtttta aatggacttt atgcctttgt attttttatc
    18361 gctataaagc atggtttagc aggtaaagga ggggttttag taaccactat gatccctata
    18421 ttttcttatt tgatatttgt gatagcgata ttctttcaaa aagataaaaa atcaactcac
    18481 aagatcacaa agagtgaaat tctaggctta tttttgggtt tgatttcagg gctttgtttg
    18541 ctaaatttag gctctatgga agagcttttg ggtaagttta atgctttgtt tttaagctgt
    18601 gcttttatat gggctttaat ggctgttttt actcataaag caaaaggaac tcatcctttg
    18661 gcgatcaatt tttatatcaa tcttatgtca ttattgatgt tttcatgggt gttgtttgat
    18721 cttaaaagtt atgagatctt tcaatttgat tttaaatttt ggatcaatct ttttgtggtg
    18781 gcttttttat ctacggtggt aggtacgagt atatattatt atggaattca tattttagga
    18841 agtgtaaaag caaattcttt tgttttaatc actcctgcaa gtgctttgat ttgtagcttt
    18901 tttatcttag atgaagtgcc tactatactt actttaatag gctgtgtttt agcgattttt
    18961 gctatatatt ttatcaatat ttatagcaag aaaaaatcct aagattttaa agatgaattt
    19021 aaaatatcgc ttataaacat atgccctggc gcatgggtaa tcacaaaagg caattttgct
    19081 ttcattatca cattttgtgg agttactccg caagcccaaa atacaggaat ttcgccttct
    19141 tttataatag gatcatcacc aaaatcagct tttaaaatat tatttatacc aatttcctta
    19201 gcattgccaa tttgcacagg agctccgtga accaaaggaa aattagcagt gatttcttta
    19261 gcttttttgg cattatcagg agtaaaggga cgcatggaaa caaccatttc accgctaaaa
    19321 actcctacac ttttgcaagc aatattggtt ttatacattg gcacattgca tttattgcta
    19381 atatgtctta tttctaagcc tttttcaagt aaagcttctt caaaagaaaa gctacaaccc
    19441 agtaaaaaac ctatcaaatc atcgttataa tactcgctta tatcgtaagc ttctttagtt
    19501 tttatcccat tttcatagat aaaatatttt ggaatatcgg tgtaaatatt tgcatttttg
    19561 gcaatttttt gagtaaattt accatgtact atttctaaaa gtgggcaggg ttttggatta
    19621 agcatgcaaa aggtttgaaa gtctttagcg tattctttgg gtaaaatcac caaatttgct
    19681 tgtgcgtagc ctaaggccat gcctgaagtt tgttctttta tctcaccttt tgcgattttt
    19741 tctcttagtt cttttggatt catctttatc cttaaatcaa attttcaaaa tcaagattga
    19801 tttttttatc caaagtctta aatttttctt ccctttgctt ataaagttct aaagcatttt
    19861 gcatgctaat gttttcaaat ttaaaatttg ttcctaattt cgcttgtgca agcaaaggca
    19921 agtcattttc tataacagag gctatttttg tataacctcc agtgctttgt cttcctgcca
    19981 ttaaaatgat aggtaggcca ttttttggca cttgaatact tccaaaaacc gcaggatctg
    20041 aaataatatc ggctgaattt ttatgttcta tcgtagtttt agcttctgca taaattgcca
    20101 ttctatcgct ttttaagcct attttataac tagtatttaa aaaggtattt aagccatttt
    20161 gcgtaaaagc atcatcattt gtgcctaaaa taacacggat agtgggttct ttagcaaatt
    20221 gaaaaacagg attttcgcat tctctttttg atagattaaa ggggataaag ctgttattta
    20281 gttctaatac atcatccttt tgcaaagctc ttccattaaa taccccaaca cccattttta
    20341 catcgcttga ttttgaattt aaaaagcttt ttatcttaaa tccacccgct acgcatagat
    20401 agcctcgaaa acctattttt gctaaaccaa gttctaaaat atcacccttt tttgcttgat
    20461 aaactttgca agtttgaatt tttttattat ttaatttagc ttcaaattct gccccgctta
    20521 atacaaaata gctttcatct aaaaattcgt attttccacc ctttaaacaa agctcaagtc
    20581 ctgcttcatc ttgtttattt ccaagtaaga tatttgcaat ccttaaagaa agttcatcca
    20641 tcacaccgct tcttgctatg cctaatttag cataattttt acgcccaaga tcttgtatgg
    20701 tggaatttat agaagcttca atgactttta tactcataaa tttccttttg ataagccttt
    20761 tttaaaactt gttctttaat atcgtaaaat tcatcttttg aaatggcctt aaattttaaa
    20821 agcattcccg cttttaaaag tgtaggattt ttctcatcct ctttgttaaa aaattccaaa
    20881 ggagttctag caatgatttg ccaaccgcct gggcttgaaa tcggataaac tcctgtttgc
    20941 ttatcggcaa tacctacact tcctgcctca attttagttc tagggcttgc aagtcttggg
    21001 gtaaaaagtc tttcatcaag tcctccaaga tagggaaaac ctgccataaa tcctagcata
    21061 aaaacaagat aatagggttt tgtgtgaaga tttatcaatt cttccttgga aagattgtga
    21121 tatttgcata caaattctaa atcaagccca aattcttcat cataacaaag tggaacttta
    21181 atacagagat tggatttttt ctccgttatt ttaatatcct ttttgatttt ttccaaaaaa
    21241 tcaagtaaag aatttaagga taatacgcaa ggattaaaat aaataagcaa gctagaataa
    21301 gcacttacaa gctcatctat gccataaatt tcattttcat ttatgccttt ttgaattcta
    21361 gcttctgtac ttaaaaccaa agcattaatt tgaggtgaaa tttcttgttt aaagcgcaaa
    21421 agcaccgctt tacttccact aaaatgtacg ctaaacattt tacattaact ttatcataga
    21481 aagtacagat aaataagaca tcaaagccac gatcaaaagt ccaaaagcac tcatccattt
    21541 aggatgttta tagtctccaa ctacgctttt tttatgcgct gcaattatca ttataaatag
    21601 ggtaacaggc aaaatccaac cattgatcgt cccaacgatg attaatatac ttgcaggaga
    21661 ttttccaagt atataaaaaa ctaaagttga aacaataatg aaaaaaatta ccacaaagcg
    21721 gttatatttt tcaatccaag ggtgaaagga tcttataaaa gatacagaag tgtaagcagc
    21781 cccgataact gatgaaatag cagctaaaaa tagtactacg ccaaagattt ttaagcccaa
    21841 atcccctaaa gcatgatgaa atactgaacc agcaggattt tctttatcca gtataaaacc
    21901 agaactaact actcctaaaa ctgctaaaaa caaaatcaca cgcatgattc ctgtgatgat
    21961 gattccgctt actgcagctt tattaatata gtttaaattt tcttttccat aaagctttgc
    22021 atctataagt ctgtgcgcgc ctgaaaatac tatatatcca cccactgttc cgcctactaa
    22081 ggttactata gaaataacat caatttgtgt aggtataaag gttctaaaaa gagcttcgcc
    22141 aatgggaggt tttgaagcaa aggctacata agcagtaagt acaatcatca caaaacctgc
    22201 taaaacgatg aatttatcca tcaattcccc agctttttta aagataaaaa taccaatagc
    22261 gataatagcg ctaataactg ctgcattttc tacgctaata cctaatacta tatttaatcc
    22321 aagcccagct cctgctatgt ttcctatatt gaagaaaaag ccacctagtg caattaaaaa
    22381 agctacaaaa tagcccaaat tgggtaaaac catattggct acttcagttc ctctttttcc
    22441 acttatccct ataatgcgcc aaatattaag ctgtgctcct atatccaaaa taatagaaac
    22501 aagtattaca aaaccaaaac tagccaataa gcttcctgta aatgttgctg tttgggttaa
    22561 aaatccaggg ccaatagcag aggttgccat caaaaaagca gcgcccaaaa gagcggtttt
    22621 gtttatcatt tttatccttt cttatagttt ttaatttata aaatcattta aggcttttat
    22681 ttgaatttgt tcttttgtta aattttcttt gattttttta acaaattcta atgcttttat
    22741 accatctcca tgcacgcaaa tactatcagc ttttaaatca atttctttgc catttatgct
    22801 tgtaactttg ctttctttta tcatttttat cacgcgtttg atggctaaat tttcatcgtg
    22861 tattaacgct ccttctaatt ttcttgaaac taaagtgcca tcatcattat aggcacgatc
    22921 tgcaaaaact tcattagcat atcttaaacc ttttttctta gctgcttcat tcatagcaga
    22981 attactaagc cctagaaaaa taatattttc atcaaaactc gccactgcct cacaaagtgc
    23041 taaagctaaa ttttcatcaa gggctgccat attataaagt gctccatgag ctttaaaatg
    23101 ctgtattttc atatcttttg ccttagcaaa gccaaataaa gctcctagtt gatacaaggc
    23161 atagttttta gcctcttcaa agcttatttg catattgcgt cttccaaaac ccaaaagatc
    23221 aggataagat gggtgtgctc ctatgcaaac attattttgc ttggctaaat ttaaggtttt
    23281 atccatcaca caaggatcac ccgcatgaaa gccacaagcg acatttactg aacttacaaa
    23341 ttttaaaatt tcttcatcca ttcccatttt atagacgcca aagctttctc ctagatcact
    23401 atttaaatct actttaaaca ttttttacct tatttgttta atataatctt aacttttatt
    23461 gtatcttttt ttaaccagac taagaatgat atttttttaa aaaaatgtaa attttataaa
    23521 aaaatataaa atttattaca aattgtaata aatatgttat aatttaacta taaaaatatt
    23581 ttaagaaatc aaaacaatgc aagaaaatac tcaaagacat atacaaaata taaaaatatc
    23641 agctctaagc ggtgtgggaa taatttttat gctgatatat tttttatcct ctttttttat
    23701 cattgttgta tttaaaatga aaaagataaa atgagttttt aagcaaggaa attccttgct
    23761 tgaatttaat cttttcttgt ttttgcatcc actataaata aaggtttgtt aagaagttta
    23821 aactcactga taacattcaa agtcttatcg cttgttaccc atttgataaa tttgctagcc
    23881 tctgtgtaat ttacattttt acaatgcttt ggatttgtag cgattataga gtagaaattt
    23941 ttaagattgt catcgccttc atttacgatc actaaattag gattgccttt ttcattggct
    24001 tcgtatttga tataagtgcc acgatcggtt aaaatcacgc cttttttttc ttctgcgatt
    24061 ttgatacttg ctaacattcc ttgtccgctt tgttgatacc agctttcttt ttcgggtaca
    24121 ccaccaagat ctttccaaag agctttttct ttgttatcag tgcctgattt atcgcctctt
    24181 gaaatgaaag taagtttttc atttttgata agttctaggc tttcttttaa agttttatct
    24241 ttaaatttag gagctaaaga tttatctgcg ataatgataa aatcattata cattacaggc
    24301 gttctatcta cgccaaaacc tttgctcaca aagtcttttt ctgcttttgg agaatgcaca
    24361 aaaagcacat cagcattgca atcttcaccc atttttaaag ccgcacccgt tcctacagcg
    24421 acccatttta aggtattgcc actttctttt tcatagagcg gttttaaagc atctaaaagt
    24481 cctgtgttat cggtgcttgt tgtggttgcc attctaagtt ctgctgcgct tgcacttaag
    24541 gctaaggcaa gagctaaaga aatgattttt ttcattttgt ctcctaatta aaattttact
    24601 taaaaaatat tgtaacataa ttatgctaaa attacttatt taaaataagg aaactttttg
    24661 gattatatct tagaaggctt tactcaagct ctatttttgc tttttaacgc tgatgaaagc
    24721 gttatttctg caatcaaaac aacacttttt agctccagca tttctatcgt tttatctttg
    24781 attgtaggtt ttcctttggg ctttgcttta ggtttttttg aatttaaatt gaagcgtttt
    24841 ataaaactta tggttgatac cagtctttct tttcctacgg ttgcggttgg gcttatactt
    24901 tatgctttga tttcaagcag agggcctttg ggggatttag gcttgctttt tactgtaaaa
    24961 gcattgattt tagggcagtt tgttttagct cttcctattg ttatcgcact tttttctaat
    25021 ttgatagaaa atatgaataa aaagcatttt ttactcatca aatctttaca tttaagccct
    25081 ttaaagcttg tgatgactat catttatgag ttgcgttttg ctctagtaag cgttgtggct
    25141 ttagcttatg gcaggatagt tgctgaagta ggagtagcga tgatagtggg tggaaatatc
    25201 aaatacgata ctagaactat taccacagcc atttcccttg aaaccaacaa aggtgaattt
    25261 gctagcggta ttgctcttgc tttagttttg attttcatcg cttttatttt aaattttatt
    25321 atacacaaac tcaaaagata ttaaatgata gaactttgta attttaaatt taattatgga
    25381 caaaaaaata ttttaaatat caaacactta tgtttagata ctgataaaat cagtatttta
    25441 atgggttcaa atggaagtgg aaaatctaca cttttaagaa tactcaaatt tcttgaagga
    25501 gaatttgata atatcactta ttttggcaat aagcatttaa attcagatga aaaacgccaa
    25561 atttacttac tatttcccga gcctgtcttt ttaaatcgca gtgtagaaaa aaatttttat
    25621 tttttgttaa aaacttataa attagacagc aaagagatta aaaaacgcct taatgaggtt
    25681 ttaaatttac ttgaaattga tagaagtttg ttaaaaaaat atcctagcga gctttcatct
    25741 ggacaagggc aaaaaatagc atttgcttta gctttaagtg ttagagcgaa gtattattta
    25801 cttgatgagc caagtgcttt tttggataaa gatacgatga tattgtttaa aaaagctatt
    25861 ttatatatgc aaaaaacata caaaagtggt tttttaatcg ctagtcatga taaaaatttc
    25921 ttagactttt tggcgcaaaa aaaatattat ttgcatgcag gagagatttt agaatttgaa
    25981 aatacaaata tttttgaact cgaaaacaaa ggtgtgaatt ttagtaattt tatagatttt
    26041 agtatgtgta aaaactatat ttgcaaagat gaaatttcaa acaaaatagc tatcgatcct
    26101 tataaaattt cttttttata tcctgatgat ttttccaaac aaacatttga ttttatactt
    26161 caaaaatgta tcatcatagc acttagaaca agaaaagaat ttgtttttat cagagtggag
    26221 tgtggaggta aaattttaga atttgcctta gaatcagagc gatttaaaca agaaaaacta
    26281 agcttgtatc aagaactttg cttagttttt aatgaagagg ctatttgttt cttaaattaa
    26341 cataatttag aaatgttttc tttaatttat tacaaatatt cacatttttg taattttctt
    26401 cattaattat ttttaaattt gtataaaaca caaaaaaagt cttatataat gtttataaat
    26461 aacttaaaga aggaggattt atgcgttatc aaaatactca aggacttttt aaacctaaca
    26521 aacaactttc tcgcaacgca agaataaaaa atttatgcga atattatgac ttatgcgatg
    26581 aggtaaggga agattttgaa ggtttttgga aaagacaagc tcttgaaaaa attgattggt
    26641 tttcgccttt ttctcgtgtt ttaaatgatg ataaagcccc attttataaa tggtttgagg
    26701 gtgggacttt aaatgtaagt tatcagtgct tagatcgcca tatgaaaaca agacgcaata
    26761 aagctgctat tgtttttgaa ggggaaatgg gtgattatga ggtttatact tatcgtagat
    26821 tattgcatga agtttgcaag gcggcaaact tacttaaacg ctttggtgta aaaaaaggcg
    26881 atagggttat aatttatatg cctatgattc cagaaacggc tattgttatg ttagcttgtg
    26941 caagaattgg agctattcat agtgtggtat ttggaggctt ttcgcctgaa gctttaagag
    27001 atagaatcat agatgcagga gccaaacttg tagtaacagc cgatggagct tttcgtcgtg
    27061 gcaagcctta tatgttaaaa cctgctgttg ataaggcttt gagtgagggt tgtgaaagtg
    27121 tagaaaaagt gcttatagtt atacgcaata acgaacctat agaatatgtc aaaggaaggg
    27181 attatatcta taatgagtta gtaaaaaatg aatcttataa atgcgaacct gaaattatgg
    27241 atagtgaaga tttgttattt ttactttata cttcaggttc tacgggcaag ccaaaaggag
    27301 taatgcatgc aagtgcaggt tatatacttt gggcgcaaat gactatggaa tgggtatttg
    27361 atataaaaga ttatgataat tattggtgta gtgcggatgt gggttggatc acaggacata
    27421 cttatgttgt ttatggccct ttagcatgtg gagcaactac tattatgcat gaaggaacgc
    27481 ctacttatcc aaattcaggg cgttggtgga gaatgataga agagtatcaa gtgagcaaat
    27541 tttatacttc gcctactgct ataagaatgc ttcatgcaga tgctcctgat gagcctaaaa
    27601 aatatgattt aaacactctt gaagtgcttg gaactgttgg agaacccatc aatcctagcg
    27661 cttggcagtg gttttatgaa aatataggaa attcaaaatg ctccatcgtt gatacttggt
    27721 ggcaaactga aacaggaggg catatgataa cacctttacc tggagctact cctttaaaac
    27781 caggttgtgc taccttgcct ttaccaggaa tttttgccga ggttattgat gaagagggta
    27841 atgtaaaaga tgtggctgaa gatggcttgc tttgtattac caagccttgg ccttcgatga
    27901 ttcgtggaat ttggggagat gaaaaccgct atatagaaag ttatttttca caagccaaaa
    27961 aagaaggaaa gccagtttat tttagcgggg atggggcttt ttatgatgat aatggctata
    28021 ttactatcac gggaagaact gatgatgtgg taaatgttgc agggcaccgt ataggaacag
    28081 ctgaaataga aagtgccatc gctaaacatc caagcgtagc agaatcagca gttgtaagtg
    28141 tgcttgatgc gattaagggt gagtctttat ttgcttttgt ggttttaaat ccaacttcaa
    28201 gttgtgattt aggaggggct atagaaacct taaaagaatt aaatgatatt ttaagagcag
    28261 agattggacc tatagctaag atcgaaaaaa ttctttatac tacaggcttg cctaaaacaa
    28321 gaagtggtaa gatcatgaga agaattttaa gaaccatagc aaggggcgag gaattaaaac
    28381 aagatatttc aactcttgag gattcaggag tggttcaaag tattatcgat gcagctaaga
    28441 caggaattca ataaggcaaa aaattctttg ccttattttt aaatacatgt taaacttagt
    28501 tttgatttat ttaaaaattg tagtttttgg ttataatacc aaaaacaaat aaaggataat
    28561 tatgcttcaa acttgtattt ttcctgcagc aggatatggg actaggtttc tacccgcaac
    28621 caaagcttta cctaaagaga tgttgcctat acttaccaaa cctttgattc attatggagt
    28681 agatgaggct ttagaagcag gtatggataa tatgggtttt gttacaggtc gtggaaaaag
    28741 agctttggag gattattttg atatttctta tgagcttgag catcaaattt cgggtacaaa
    28801 taaagagtat ttgttaaaag atatccgctc tttaatccat cgttgtactt ttacctttac
    28861 aagacaaaat gaaatgcgcg ggctcggcga tgcggtatta aagggtaggc ctttagcagg
    28921 cgatgaggct tttggtgtga ttttggctga tgatttgtgt atcaatgaag agggtgttaa
    28981 tgtgatggca caaatggtta aaatttatga aaaatatcgt tgcaccatca tagctgttat
    29041 ggaagttcca aaagagcaag tatcaagtta tggagtgatt gcaggaaatt tcgtagaaga
    29101 ggatttaatc atggtaaatt caatgataga aaaaccatct cctcaagaag ctccaagcaa
    29161 tcttgctatc ataggaagat atattttaac tcctgatatt tttggaattt tagaaaatac
    29221 taaagcagga aaaaatggag aaattcaact cacagatgca cttttaaccc aagcgactaa
    29281 tggtatggtt ttagcttaca aatttaaggg aaaacgcttt gattgcggaa gtgtagaggg
    29341 ctttgtagag gctacaaatt atttttatga gaaaagtaaa tgctaaataa tactcttttt
    29401 tttaaagaaa gtgaaattcg cactataagt tcttatgcaa atcgtatcaa tgatgaagta
    29461 gaaagtgggg atatagggta ttatcatctt atcgatacaa gtttaacctt aatagacgaa
    29521 agcttaaatt tcatacaaga taaagagcat gtaaaaaata tcgttttagt gggtatgggt
    29581 ggttcaagtt gcggtgttaa agctttgcgt gatatgcttt ttgatgaaaa aaataatcaa
    29641 agagaacttt ttatacttga taataccagt tcgcactcct ttagcaggac tttagagaaa
    29701 atcaagcttg aagaaagttt gtttttaatc atcagtaaaa caggtagcac tatagaagta
    29761 gtatcgcttt ttaagcttct tatagaacat tttaaactcg atatgcaaga attaaaaaaa
    29821 tactttattt ttatcacaga taaagattct aaactgcata aagagggtga gaatttaggc
    29881 atcaaatgct tttttatccc tgcaaatgta ggagggcgtt ttagcatact ttcagctgtg
    29941 ggtatagtgc cactttgttt ttgtggttat aatgctaaag ctcttttaga aggagctaag
    30001 gcatgctttg aagatttttt tatacataaa aaagatgaaa ttttgcaaaa agcttatcat
    30061 tattgtactc acaaaagtgc aagtatcaat gtactttttt cttacagcga tgcttttaag
    30121 ggttttaatg aatggtatat ccagcttatt gctgaaagtt tgggtaaaaa acaaggctac
    30181 aaacgcatag gtttaactcc tatcgctctt ataggagcaa gggatcagca cagcttttta
    30241 caactcatta tggatgggcc aaaaaacaaa actattactt ttttaaaaat caaagatagt
    30301 caaaaggctc cggttatacc cgatatccat tttaaatttt tagatgattt gagcaataaa
    30361 gtcaatttac acgatctttt aaatgctcaa tgtgacgcga caatgcatgc tttaattgct
    30421 gaaaatttaa gtgtcgatat aatagagctt gaaaaattag atgcatggca tgcgggatat
    30481 ttgatgtatt attatgagct ttttacttcg gcttgtgggg taatgctagg aattaatact
    30541 tatgatcagc ctggggttga ggttgggaag ttgattttaa aaaatatttt aaaatcatag
    30601 taaattttaa ataaaaagag tataatagaa ataagtaaaa ttaataataa aaatttttaa
    30661 ctaataataa ttattattta aggattttat gttataattt taaaaattaa aaaaaggagt
    30721 taacatgtca gtaacaaaac aattattaca aatgcaagca gatgctcatc atttatgggt
    30781 taaatttcac aattatcatt ggaatgttaa gggtttacag ttttattcaa tccacgaata
    30841 tacagaaaaa gcttatgaag aaatggcaga gctttttgat aattgcgcag aaagagcttt
    30901 gcaacttggt gaaaaagcta tcacttgcca aaaaacttta atggaaaatg caaaaagtcc
    30961 aaaagtagaa aaagattgtt tcactccagt tgaagtgatg gagttgatca aaaaagatta
    31021 cgaatatctt ttggcagaat ttaaaaaatt aaacgaagaa gctgaaaaag ctagcgatac
    31081 tactacagct gcttttgctc aagaaaatat agcaaaatac gaaaaaagcc tttggatgct
    31141 ttcttcagct ttacaaaata cttgcaaaat gtaatttcaa ggggcttttt gcccctttat
    31201 gatttaaatc aatttttaga actttctcat aaaaaaactt aaattctcaa gagtcaaatt
    31261 taaagaaaaa tttatatttt gattttaagc aaaataaaaa tactctaata catttatatc
    31321 attacgcctt actttctcat gctgcttatc ttaatttaaa tacaacagat atttttttaa
    31381 atatagatag aaaaacattg tttaaggttt taactcataa tatttttcaa aaagaatgcg
    31441 ttataatagg aaaatttgag cctttgatgg cattttattt tattaagcga tttgatttac
    31501 ttgctcatat taatgaagat tatcttgatt caaggggtgg gtttagagca agtttatttc
    31561 aaaacaagga aaataaagaa tttattttag ctatcgcagg aagtgattta agacctttaa
    31621 aatttgatat tggagatttg attagtgatt ttatacttct aaatggaaaa attcctaaaa
    31681 aacaatttga ttctttgtta aaattttata cactaataaa aaaagaattt tgttttggta
    31741 aaattacttt agtaggacat tctttaggtg ggcatttagc acagcttttt gttttagatt
    31801 ttgccttaga agttcaaaat atttacactt ttcaagcccc aggtattgct aaaaaaatac
    31861 taaaggacat caaaaatgaa gcttatatcc aaaaaatttc ttatcatttt catacttgtg
    31921 gtgattttaa aaaaatgcat ggtataaatt taattttgtt caaaatttgc attctaaaat
    31981 aggatatcca atttggctaa atataggaaa taaattccat catcctaaga tttgtcccaa
    32041 gatattgcat aaggttttaa atatgttata attttccttt ttaaaaggat aatatttgaa
    32101 agtattaaat tttttttacg aaaatcatcc caaatttgaa ataagctatg aaagaaaggt
    32161 acaaattcct ctttgtaata tcatcatcaa agggccaaaa tttagcggta aaaaaacctt
    32221 gatttttaac tatttatccc aatttaagcc caatgaaatt ttatttttaa atttgtatga
    32281 tactcgtttt gaaaaccaaa gcttagggca tctttcaaat tttttagaaa aaaatgtcca
    32341 aataaaattc ctttgcatat ataatgtcga atttgcctta aatttgcaag atattaaaat
    32401 tcctatcatc ataagtacag ataaaaaaga tttgcatatc gaaggatttc aagagcttga
    32461 gcttgattat tttgactttg aagaatttgt aagtatcagt agaaaaaact taccgataaa
    32521 caatctagtg ggactttttt tacaaagtgg gcgtagtaaa ttaggtgaaa aaaatatact
    32581 tttaagacaa aattttaaca ctctagaact tgaaatttta aaatacttag ctttaaattt
    32641 aggacagcag atcagtattt ccaagctttt tttagagctt aaaaaaaagc taaaaacatc
    32701 taaagatagc gtttatcaca ccataaaaga gcttgaaaat acctatatca tccatcctat
    32761 aagccacgat gaaaaaaagc ttcaaaaaat ttattttagg gattttggct taagaaacaa
    32821 tctatgcata caaaaagatt ttgctcattt gtttgaaaat cttattttaa atgagctttt
    32881 taaatttaaa caagaatttt tttacaataa attttttaca ttttatagta aggtttcaaa
    32941 aatcgcatat atttccagtc cgacgctaga tatagacttg atcaaattgc gcgctaagaa
    33001 aatcctttct aagggtttgg agcttgggat ttttcatgtg gttttcatca ctctttcgag
    33061 cgaagatagc ttttttgagc aaggggtgaa atttgaagtt ttgccttttg ataaattttc
    33121 actcggcttt tagctaagac tagaaagatt ttggagtatc gtatcgctca agatcgtatc
    33181 gttggatgat tttagtaacg atattgatat aataaccctt gcgctcggag taagaatcta
    33241 aagttttaat agcctctagt cctgttattt ctttgccttc gctttcaaat ttagctcttt
    33301 cgttgcgaaa ttcctcataa gcaaagtgcc gatttaaatt cagcacataa gaatccacac
    33361 tatcttgcaa gctatcaaaa attctaattt tatgtttttt atcaggatgt cttagatcag
    33421 ggattaagcc cttttctccc caggtccatt ctccaaaaag attatttgcc tctcttgcaa
    33481 aacggcttgt tcccgtagca ctttcgacca aagcttgggc tatacccatg gattttggaa
    33541 ttttttgaat gcgttttttg tattctgtaa aatcataaag attttcaacg cggtatttgt
    33601 ttttaagatt gattaatttt tctagattgt tttggtttga atttctaagt ccatttttat
    33661 acgcatcata aaaaaaagct tctacaaaag ccctttcttt cgctatttct tcaaagcttt
    33721 tatcaaacat tgcattcatt ttgacaaaaa atatttgtct tttttgctct acattgagtt
    33781 tataatactc ctctccaaag ccatttttaa gctcgctatt gccaaaaaga gggagtaaat
    33841 aaaaactaag aaaaattata attcgcttca aagcaatatc tcacttttcc cttaaaaaat
    33901 aattcttcat tttcgaattt aaaacttagc tcttcaccgc tttttggaat cactctagct
    33961 tgattgtgaa tttttttatt taagaatgca agataaaaac aagctcccat gcccgtgcca
    34021 catgcttgcg tttcatcttc tacacctctt tcaaaagtgc gaactcttaa agtattgtcg
    34081 ttttcaactt ttacaaaatt tacattggta ttatattttt ctctcatttg tttgcaaagc
    34141 ttaagatcaa actcatccaa attttcacaa aaatgcacca aatgtggaac tcccgtatcg
    34201 caaagttgcc agtttttttc acactcacta aaggcatctt gtatgttttt tatcttccct
    34261 aaagaaactt ctacgctatt attatcaaca tttgctttta taactcctgc tccggtaaga
    34321 aaagccatat ggggtttgat accatttata tggtgtgcaa aatgtgctgc tgctcttgag
    34381 ccatttccgc acattgaggc tgttgagcca tcgttgttgt aaaattccca ttcaaaatcg
    34441 tattttttat gaggtaaaat cactacaaag ccatctgcac ctatgccttc ataacgattg
    34501 caaagttctt tagctaaagc acttctgtct tttttttcac tcgcattcat tatcacaaaa
    34561 tcattgccac ttgcgcaata tttataaaac ttcacatttg tcctttggaa atattttgta
    34621 ttactttaac acattcttgc ctaaaatcga cataagagcc aatattttta atgataaaat
    34681 ccgctttttt aagtttttct tcaatattca tttgagaatc aagccttgct tttgcagctt
    34741 ctaaacttaa attatctctt tgtatgattc tttttaggct gagttcttta ggagcataga
    34801 ttaagatcac ttttcccaaa ccatcataag caccgctttc aaaaaaaaga ggaatttcta
    34861 caaaaaaagg tttattttct tgttctagaa tttgcatttg ttctaaaatt tgagcacgaa
    34921 ttttaggatg ggtgaaattt tctaatatgg ttttggcttc tttgttttga aaaacaattt
    34981 ctccaagaat ttttctatct atcttgccct ctgctttcaa taaatttttt ttatgaaatt
    35041 tagagaaaat ttgagccagt tccaaagcat atttatctaa aatttcgtga gcgatactgt
    35101 ctgcactaat gcttttaaag cccaaagaat ttgctatttc tataaaagtg ctttttccac
    35161 aggctataga ggcggttaca aaaaaagcgt ttttcatctt atgccttatt aaaacttttt
    35221 tcgttaaaat atctttttag ttcttaaagg aaaataaatg aaaatttcat acgaagatgc
    35281 tggagtaagt atagataatg gcaatgcctt tgtagaggcg atcaaacctt tggtaaaaga
    35341 aacctttaac gataaagttg taggaggtat tggctctttt gctggagctt ttagaatgcc
    35401 aagtggcttt aaaaatcctg taattttggg ggctacagat ggtgttggga ctaaacttcg
    35461 tttggctatt gatgcaaaaa aatacgacac catagggcaa gatttagtag caatgtgcgt
    35521 gaatgatttg atttgtaatt ttgctactcc tttgtttttc ttggattatt acgctacagc
    35581 caagcttgaa gtagaggttg caaagtcagt tgtggcaggc attgccgagg ggtgtaaaat
    35641 ggcaaattgt gctttaatag gcggagagac tgccgaaatg cctggaatgt atgcaaaaga
    35701 tgattttgat cttgcgggtt ttgcagtggg catggctgaa gaagatgaga tcgatagaag
    35761 taaatttgtt aaaaatggcg atattttgct tgctcttcct agttcaggac ttcattcaaa
    35821 tggctattct ttagcaagaa aagtactttt tgaaggttta aaactgaaat ttgatgataa
    35881 gatagaaggt aaaaatttaa tcgatgtttt attagagcct acaagaattt atgtacgcga
    35941 ttttcttact ttaaagcctt atatcaatgc tttagcacac atcacagggg gtggtttagt
    36001 agaaaattta ccacgcgttt tgcctcgcgg aatgggagca actatacgca aacatcatct
    36061 taaaacccct gaaattttct ataccatagg acaagctgta gaagaaagtg aaatgtatag
    36121 aagctttaat atgggtgtag gcttagtaat ggtcgtagat ccatctaatg taagtaaggt
    36181 tttagaaaac tcagacgctt ttatcatcgg cgaaatcacg atcaacgaag gtgttgtttt
    36241 agagtaaaat aaagcgttaa tgtgctttat tttactctat taagttctat ttttgtggaa
    36301 ttttgctctt tgggcaaagg attggtttgc gctagataaa aggcaacggc tatattgatt
    36361 atcatagcta taagtaaaag tggagtggtg cgttttataa tatccatcgg atctactttt
    36421 acaaatccag ccaaagctat gataccgcct gctatgggcg aggctgcgcg ccctaaacaa
    36481 gatgcaattt ctataggtaa aacaaaagtg ataggggcaa cgcctaattt tgtagctata
    36541 tcaggagcta atttcccaaa agcattaaaa gcagcaatcc cacttcccat aatcactgta
    36601 gcaaaataaa ctaaaaagct taaaacagtg atgcttaaaa gtatgccaaa ccatgcaaaa
    36661 tttcctgttc caagatttga aaccgcgtta gcaaggatat taactccacc aagtgcttta
    36721 atgccttcag caaatactcc agcggcgatg attatgctta cgactgagat aaaaatttca
    36781 gccatagctt ttaaaatcac catcatatct tcgcctaatt ttctagcatt tctgtgtctt
    36841 gcaaattcaa caagaaaaac taaagaaatg cttaaaaaat ttgctgttac aacatcaagc
    36901 ttgatagtaa aaaaatatgc tataaataaa aatacaacag gtaaccaagg aaagagtata
    36961 taaaaagtag gacatttagg atcaatgatt ggtggaattt caacttcatc atttaaaaca
    37021 cctttttctt tatctctttt atcaacccaa gcaaagtaaa aaggtattaa gatagcaata
    37081 accatcacat aagcaatcac gctataaatt tggtaattta aaaaaagccc cacgacatta
    37141 tcgctttgtc ctaccatatc tgccatattg attgaatttc catcttttgg accataatca
    37201 agcgcaatca aagaaagcac acatacagct gtaataggac ggattttaag tgagattaaa
    37261 acaggataaa tacatgctaa taaaagcaaa agaagtccag catagctaga aataacaatt
    37321 tttaaggcca ttccaacgat aaaagttccg cttaaaatca aatatttatt tttaattttt
    37381 cctaaaggtt tgtttgctaa aaaagcgagt ttagccgaag cattgatatg tttcatataa
    37441 gcagcaaaac ctgccacact catgataata agtcctactc cagaaagctg acttttaaaa
    37501 gtcgctgtga taaaagcata gctatcaagt aaaacattca aaaagcttgc atgttctctg
    37561 ctcggagctt ttggtatagg tgttcctgtg atgtaaaaag caaaaataag caagataata
    37621 cctgaaagaa aaaatacaaa aataggattg tattttttaa gtatataata agcaacgaca
    37681 attaccgcta aaagtgtaga acatatcata aaaattggca tgatttctcc taaagttatt
    37741 attagctttt attttatttt agctaaaatt taactaataa atatttttca tttaaaattt
    37801 tacttatttt ttgcattata aaattaataa tatgtatagt ttggttactg aaaagtttat
    37861 gtttgtttaa aaaaatgatt tttgtattat aattatacac aaatcataaa tattaaaaag
    37921 gatctagtgt ggcaagaatt ttggcatttg atataggaat aagctctatt ggctgggcat
    37981 ttagtgaaaa tgatgagtta aaagattgtg gagttaggat ttttacaaag gctgaaaatc
    38041 ccaaaacagg agaatcctta gccttgccaa gacgccttgc aagaagtgcc agaaaacgcc
    38101 ttgctagacg caaagcaagg ctaaatcact taaaacattt aatcgcaaat gaatttaagt
    38161 taaattatga agattatcaa agctttgatg aaagtttagc taaggcttat aaaggctctt
    38221 taattagccc ttatgagtta agatttagag ctttaaacga gcttttaagt aagcaagatt
    38281 ttgcaagagt gattttacat attgcaaaaa ggcgtggcta tgatgatatt aaaaataatg
    38341 gtgatgaaga aaagagcgag attttaaaag ctatcaagca aaatgaagaa aaactagtaa
    38401 attatcaaag tgtgggagag tatctttata aagagtattt tcaaaaattc aaagaaaatt
    38461 ccaaagaatt tataaatgtt agaaataaaa aagaaagtta tgaacgctgc atagcgcaaa
    38521 gttttttaaa agatgaatta aagcttattt ttcaaaaaca aagagaattt ggcttttctt
    38581 tttcaaagaa atttgaagaa gaagtgctta gtgtagcatt ttataaaagg gctttaaaag
    38641 atttttctca tttagtggga aattgtagtt tttttactga tgaaaaaaga gcgccaaaaa
    38701 attcgccttt agcttttatg tttgtagcac ttacaagaat tatcaatctt ttaaacaatc
    38761 ttaaaaatac tgaaggaatt ttatatacaa aagatgattt aaacaccctt ttaaatgaag
    38821 ttttaaaaaa cggcactcta acttataaac aaacaaaaaa gcttttgggc ttaagcgatg
    38881 attatgaatt taaaggagaa aaaggaactt attttattga gtttaaaaaa tacaaagaat
    38941 ttataaaagc cctaggtgag cataatttaa gccaagataa tttaaatgaa atagcaaaag
    39001 atattactct tataaaagat gagattaaac ttaaaaaggc tttagcaaaa tatgatttaa
    39061 atcaaaatca aattgatagt ttaagcaaat tggaatttaa agaccattta aatataagtt
    39121 ttaaagcctt aaaacttatc actcctttaa tgcttgaagg taaaaaatac gatgaagctt
    39181 gcaatgagct taatttaaaa gtagcaatca atgaagataa aaaagacttt ttacccgcat
    39241 ttaatgaaac ttattacaaa gatgaagtaa ctaatcctgt ggttttaagg gcgattaaag
    39301 aatatagaaa ggtcttaaat gccttactta aaaaatacgg taaagtgcat aaaataaaca
    39361 ttgaattagc aagagaagta ggtaaaaatc acagccaaag agctaaaata gaaaaagagc
    39421 aaaacgaaaa ctacaaggcc aaaaaagacg ccgaacttga atgtgaaaaa ctaggcttaa
    39481 aaataaatag caaaaatatt ttaaaattaa gattatttaa agaacaaaaa gaattttgtg
    39541 cttatagtgg agaaaagatt aaaattagtg atttgcaaga tgaaaaaatg cttgaaattg
    39601 atcacattta cccttattct agaagttttg atgattctta tatgaataaa gttttagttt
    39661 ttaccaagca aaatcaagaa aaacttaata aaaccccctt tgaagccttt ggcaatgata
    39721 gtgcaaaatg gcagaaaatt gaagttttag caaaaaattt acctactaaa aagcaaaaaa
    39781 gaattttaga taaaaattac aaagacaaag agcaaaaaga ctttaaagat agaaatctaa
    39841 acgatactcg ctacatcgca aggcttgttt taaactacac taaagattat ttagattttt
    39901 tacctttaag cgatgatgaa aatacaaagt taaacgacac acaaaaaggc tcaaaagtgc
    39961 atgtagaagc aaaaagcggt atgcttacat cggctttaag acacacttgg ggctttagta
    40021 ctaaggatag aaataaccat cttcatcacg ccatcgatgc agtaattatt gcttatgcaa
    40081 acaactctat tgtaaaggct ttttcagatt ttaaaaaaga gcaagaaagc aacagtgcag
    40141 aactttatgc aaaaaaaatt agtgaattag attataaaaa caaaaggaag ttttttgagc
    40201 cttttagtgg ttttaggcaa aaggttttag ataaaattga tgaaattttt gtctcaaaac
    40261 ctgagagaaa aaagccaagt ggagctttac atgaagaaac atttagaaaa gaagaagaat
    40321 tctatcaatc atacggcgga aaagaaggag ttttaaaagc cctagagctt ggtaaaatcc
    40381 gcaaagtaaa tggtaaaatt gttaaaaatg gcgatatgtt tagagtggat atttttaaac
    40441 acaaaaagac aaataaattt tatgctgtgc caatttatac tatggatttt gctttaaaag
    40501 tattaccaaa taaagctgta gcacgaagta aaaaaggtga gataaaagac tggattttaa
    40561 tggatgaaaa ttatgagttt tgcttttctt tatacaaaga tagtttgatt ttaattcaaa
    40621 ctaaagatat gcaagagcca gaacttgttt attttaatgc ttttacaagc tctactgtta
    40681 gtttgattgt ttcaaaacac gataataaat ttgaaacgct aagcaaaaat caaaaaatat
    40741 tgtttaaaaa tgcaaatgaa aaagaagtaa tcgcaaaaag cataggaatt caaaatctaa
    40801 aagtatttga aaaatacata gtttcagcac ttggagaagt gacaaaggct gagtttagac
    40861 aaagagaaga ttttaaaaat gagttacgat gaagctttta aaacactgct tattagctct
    40921 aatgccaagc taaatttaga gctaaatcat cttgtgatta agcaagatga aaatatagcc
    40981 aaattgtttt taaaagatat aaatatcatc gttttagaaa gcttacaagc aagccttagt
    41041 tccgcacttt ttaatgcctt tgcaaggcat aaaatcatct tgctaacctg cgatgaaact
    41101 catagtataa atggcgtttt tactcctttt ttagggcatt ttcaaagtgc aaaaatcgca
    41161 aaagagcaaa tgaatgtaag cgctcaaaaa aaggctattt tatggcaaaa aatcattaaa
    41221 aataaaatcc taaatcaagc ctttatctta aaaaaacaca ataaaataga gcaaagcaat
    41281 gagcttataa atttggctaa aaaagtaagc ttaaatgata gtaaaaatat tgaagctgtt
    41341 gcggcggcgc tttattttaa aactttgttt ggcgtttctt tttcaagaga tgagctttgc
    41401 tttgaaaatt ctgctttaaa ttatggctat gcaatcatta gggcttgtat tattagagca
    41461 gtttgcataa gtgggctttt gccttggctt ggcataaagc acgataatat ttataattct
    41521 tttgcgcttt gtgatgattt gatagaagtg tttagggcta gtgttgatga ttgtgtttta
    41581 aagcttaagg gtgaaagtga gtttttaagc aaagatgaca aaagagcgtt gattggcaat
    41641 ttacaaagta aaatcaattt tgatgggcaa aattatcctt taaacagagc gataaatcat
    41701 tatgtggcaa attttaaaaa tgctttattg tatgaagatg aactaaagat agtgaaattt
    41761 gatgattgaa gataaattta tgcgtgtgct tttgatgttt gatgtgccaa ctaaaagtaa
    41821 aaaagagcaa aaactagcaa gtaaatttag aaataatctt ataaaattag gttattttat
    41881 gctgcaattt agtgtttata tgcgtatttg caagggttta agttctgcaa aaagttctat
    41941 tgaaaatgta aaaaagattt tgccacctta tggaaatgta agggctttaa tcatcactga
    42001 aaagcaattt gataaaatgg agcttttgct tggtggcata gtttttaacg aaaaagttaa
    42061 taacgaaacc aatttaacgc tttttgatat agatagtcat ggagaattta aatataaaaa
    42121 ttcaaataat gaagaaattc aaataaacaa aaaacaagaa aaatatcatc agcaaaattt
    42181 atttgaattt taaaagcggt tttaggggat tgtaacccgg cagagtcccg caaactcttt
    42241 attttagtcc ctttttaaat ttcttatgag attatagcat aatttttgct atttttcatg
    42301 aaaaaccccg aaattttcat tatctggtaa atatctattt taccataaag aaatttaaaa
    42361 agggactaaa acatgttaat tgtagttgca tatcatatcc ttattttacc ataaagaaat
    42421 ttaaaaaggg actaaaacaa gtttagtgtt gtttttttac ctttttatat tttaccataa
    42481 agaaatttaa aaagggacta aaacatcaca aagccttcat gcgataagca taggatttta
    42541 ccataaagaa atttaaaaag ggactaaaac aatatattat taatgtagta aaaaaatatt
    42601 attttaccat aaagaaattt aaaaagggac taaaactgaa tttttacaac tttatagatt
    42661 ttcaaaattt taccataaag aaatttaaaa agggactaaa aaaccctagt ggattgaaac
    42721 tccgctaggg ctaattactc cactaaaagg aggttgcaaa tttgaaactt attgaaattt
    42781 agggttgatt aaaatcgaaa taaaattatt taaataattt taaggcataa agataatatc
    42841 cactaagctt tcattttcta acatttcaca ttcttttggt actaccataa gggcagcttt
    42901 attgttaaga ttgtttataa tcgcactaga gccttctttt ttaccttcaa gattagctaa
    42961 aatgcgtcca tttttaaact ctatattgca agcgacaaat tccaaataag gtgttttttt
    43021 cttgtagctt ccttgtaaaa aggctttgca aatatagtct ttaggctgaa gtaaccaaga
    43081 gtttaaaatc tctcttgcgt aaagattaaa cattaccata gccgagtaag gaaaacctgg
    43141 taaggcgatg atgaattttt cattagcctt ggctattttg atatgtctgc ctggttttat
    43201 gtcggcttta tcgatgatga tttcatattc tttgatggct ttttttaaaa agtcaaaatc
    43261 ccccatagaa accccgcccg ttgtaatcaa aatatcacaa ctttgcaaag cactttcaag
    43321 ggtagaaaaa gtggcttttt catcatcttt taaaagagga aaaacccttg tatcgcaatt
    43381 taaattttta gctaaattag ctatggcgat atgatttgaa gagcggattt gagcaggatt
    43441 ttccaaggct tctcctagat ccttgatctc acttccacta cttaaaaccc ctacaatagg
    43501 ctttataaac acactaatgt gaaaaaatcc aagttcagct aaaagagcta tctcgctata
    43561 atttaacctt gtgccttttt tgagtaaaat ttcatctttt ttatagtttt ctcctaccgc
    43621 acgcacggca aaagcttgag gaactttttt ttctataaaa agagtatcat tttctacgcg
    43681 tacattttca acagggacta aagtatcgct tccttcgctc atgagtgagc ctgtaaaggt
    43741 ttttacacaa gtaccatttt gcacgctaaa ttgtggcata gtgcccgcag gtgtgaggcc
    43801 taaaattttt aaaggcttat cttgatcttc aaatttgatc gcataaccat ccatagccga
    43861 agttggaaat tcgggctgat ttttaggggc ttttatgtct tgagctaaaa tgcgtcctaa
    43921 acactctgta agagctattt tttcaatctt ttcataggtt ttgatatgag aatgtaaaat
    43981 ttttaaactt tcttcataag acattaacat tttttatcct tttaaaagtc ctgcaccgca
    44041 aagtttggtt gatctttctt tggcgtaaat tctttctttg tttatcacat catacttcca
    44101 aatgggtgca cttgctttaa aatcttcaac aaattcatta agaagtttaa gtcctaattt
    44161 tctttgtttg cttaaaattc ctgcaaaata cgagctttca tgaaccgcaa catcgcctat
    44221 agagtgagca aaaagcaagc taataccatc aaaatctact cttttttgcc actcatcaaa
    44281 ccattttttt aaaagcggtt cataaatatc aaaactaagt gcctcaatgc ctccttcttc
    44341 acgcacaata ccacaaaaag tcagtaaagc accgcagttt ttatccttgg aaaattcata
    44401 ccattggcta taaattttag gaatatctaa agagccttga taaagtgtaa aatgtttcat
    44461 ttaacccccg caaactggcg gtaaaagtgc tattttatca ccagttttta acttagtgtt
    44521 tttatcaaaa atgatttcat catttaaaga taccgcacaa agttctagcc attcttttaa
    44581 actctcatct ttttgcaaaa tttcttttaa ttcttttaaa ttttttactt caagttctaa
    44641 attttcttta tttatagggc ctaaaaattc cacttttacc attttattcc tttacttcta
    44701 aatttcccat cattcctaaa tcttcatgtt ctaaaatatg gcaatgatac attctaagtc
    44761 ctttaaaatc ttgtttcatt ctaagtctta actcttcatt aggacgcaca tttatagtat
    44821 ctcttaaggc tctaaattcg gctttttgaa ctttgccatt gagttttgat gagatgagtt
    44881 caaattgcgt gccatgtata tggaaaggat gatccatgtg agatttgttt atcactatcc
    44941 agtcttcaac tactccaagc ttggagctta aatcaatgcg ttttaaatca tagcttttgc
    45001 cattgattaa aaacatagac gcaagagcga tttttaattc gccttcactt tttcccatca
    45061 taccatgcat ttgcatatga tcttcactca tgattatttc tttaaattcc ttaggttctt
    45121 ctgaaggttt gaaaattttt aaattttttg gaagttctac attttctttt tttaggttaa
    45181 tattggctag aaatagggta ttaggttctt cttttaccat cattttatcc ctatcataat
    45241 aagcactttc tagcttaaaa ttcccatctt ttggagcatc gattaaaact tctacacgag
    45301 aagcaggact taagaaaagt tcttctttat aaatagcttt ttctataagt ccaccatcag
    45361 taccaacaag tataaactta gctccttgta tgcgtaaatt taaatatctt gctgcagtag
    45421 cattataaat gcgtatgcgt tcgtttgtgg cgagtttaat tttaggttta aattgtccat
    45481 tgatgagtac aaattctcct tctctaccat taagccaatc atttaggttg ttgtttggaa
    45541 tttgagcgtt ttcatcaaga cgtaaatcgc taatcatcaa atctctttct tttaaatgac
    45601 ttaaagcatc ttttttcgct ttgatcacaa aagccccagc taaacccata aagacttgtt
    45661 tagaagtggt ataatgagga tgcggatgat accagtaagt tcctgcgcta tcttgaggaa
    45721 tttcaaatcg atatattctc tcctctcctg ctaagatagg atcatgtggg cttccatctt
    45781 gatcaggtgg tacaggaacg ccatgccaat gtatagttgt agcttctttg agtttatttt
    45841 tgactaaaat ttcaagttta tctccttcaa aaacttctat ttttggagcc ggtattaagc
    45901 cattgtaagt gtaaaataga gtttttttac ctttgatgag ctctatgtga ttttctttga
    45961 tttctagggt agcacgaaaa atattttttt ctttactttc atttttgagt aaaggtaagg
    46021 cttttaaaat ttctccttgg gggaattgtt ttggatctaa aagctttaaa ttttttggag
    46081 caaagtttat aaaagaagta tctaagtcat gatttataga atgattttta tgcatggagt
    46141 gcatatcgtg cataggattt gcataggcta cacccatact tgctagagta agtgcattaa
    46201 attttaaaaa atttcttcta ttcattagtt tttccttttg cttgattttt tgtattatat
    46261 ttaactttag taaatattta ttttgaaaat ttggtttaat tttgttatga ttttagcaat
    46321 ttaatcaagg aaaaataatg ttttatgaaa aaattcaaac tccagcttat attttagaag
    46381 aagataaatt aagaaaaaat tgtgagcttt tagcaagtgt tggcgaaaaa agtggtgcta
    46441 aagtgctttt agctttaaaa ggttttgctt tttcaggagc gatgaaaatt gttggagaat
    46501 acttaaaagg ttgtacttgt agcggacttt gggaagcaaa atttgctaaa gaatacatgg
    46561 ataaagaaat tcatacttat tcgcctgctt ttaaagaaga tgaaatgagt gagattgccc
    46621 atttgtctca tcatattgtt tttaattctt tgtatcaatt tgataaattt aaatccttgt
    46681 gtgctaataa ctccttagga cttcgttgca atttagaatt ttcttttgct cctaaagagc
    46741 tttataatcc ttgcgggaaa tactctagac tagggatttt gagcaaggat ttagaaaatt
    46801 ttgatttaag cggagtagaa ggacttcatt ttcatgcact ttgtgaagag agtgcagatg
    46861 ctttagaagc tgttttaaag gtttttgaag agaaatttgg caaatggatc aaacagatga
    46921 aatgggtcaa ttttggcgga ggtcatcata tcacaaaaca gggctatgat atccgaaaaa
    46981 tcatcactct ttgtaagaat tttagtgata aatatggcgt gcaagtttat cttgagccag
    47041 gagaagctgt gggttggcaa agtggggttt tggtagcaag tatagtggat atagttgaaa
    47101 atgagaaaag aattgctatt ttagacactt caagtgaagc tcatatgcct gataccatca
    47161 tcatgcctta tacgagcgag gttttaaatg ctagaatttt agcaacaaga gaaaatgaaa
    47221 aaatttcgga tttcaaagaa aatgaatttg cctatttact cacaggaaat acttgtttag
    47281 ctggagatgt gatgggagag tacgctttta aagaagaatt aaaacgcgga gatagggtgg
    47341 tatttttaga tcaaattcat tattctatag tgaaaaatac aacttttaat ggcataagac
    47401 ttccaaattt aatgctttta aattccaaaa atgagcttga aatggtaaga gaattttctt
    47461 acaaggatta cgctctaaga aattaaaatt ttttggaaga ataattttat tatttctttt
    47521 tagcataaaa tattttttaa atgacaaaat gaaagttttg ttttttaggt ttaaatattt
    47581 tatgcaactt tttttaaaaa acct
//
LOCUS       DAQUWA010000004        45521 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.004, whole genome shotgun sequence.
ACCESSION   DAQUWA010000004 DAQUWA010000000
VERSION     DAQUWA010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 45521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45521
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.004"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            27..950
                     /gene="yibB"
                     /locus_tag="R8X70_000153"
     CDS             27..950
                     /gene="yibB"
                     /locus_tag="R8X70_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YibB"
                     /protein_id="HEF2927974.1"
                     /translation="MEELTIVTAFYNVGRTTRSNEQYLSYFDFWAGLKNKVIIYTTDD
                     MKESILEIRKKHNLEDKTIIITKDLKEFDEQSLEKIKDTFNKYDQTLNRKNPRNIECN
                     NPLYCYLMYLKPFFVVDAIERNLTGENVMWLDFGFNHGDEFFTNRAQFNFLLEKQEII
                     NEEKINFFSVKEEEYKNIANVYFNMEPFIMGGLIFTKSKNWYIFKEHMKNALNAFLSF
                     GMVDDDQIMYLWCTRNHSNNYKIIRSYEWFDALFNFIPIKIKQKLSFKRKNSKYYKII
                     KEEIKNSKNKNLIYKIQLYIKYIYYKFINKK"
     gene            complement(956..2050)
                     /locus_tag="R8X70_000154"
     CDS             complement(956..2050)
                     /locus_tag="R8X70_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEF2927975.1"
                     /translation="MINFLDLQKINLRFKEEIENKFREVLQSGWFLLGEQNKIFEENF
                     SAYCGVKGCVGVANGLDALRLIIKAYGFSNEDEIIVPANTYIASVLAITDNGCKPIFV
                     EPDINTYNINPDLIEEKITSKTKAIMVVHLYGLATDMSKIQKIAKKYNLKIIEDCAQA
                     HGAVYDKKRVGNLGDAAAFSFYPGKNLGALGDGGCVVSNDEKLILKIRALANYGSHKK
                     YENLYTGLNSRLDEIQAGILDIKLKYLDEDNRKRRKIAKYYLENIKHKDIILPFYEEE
                     ENHVWHLFVIRTKNRNDLQEYLMKNGVQTLIHYPIPPHKQECYKEYNHLNFPITEQIH
                     AEVLSLPISPVMTQDEISETAKIINSWKKL"
     gene            complement(2043..3263)
                     /locus_tag="R8X70_000155"
     CDS             complement(2043..3263)
                     /locus_tag="R8X70_000155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2927976.1"
                     /translation="MINVTMQKNVYFFYPSKILGGAELLFIRVANYLAQYSNDIEIGY
                     IGLCDDIALLHLQQKIRFVVVNDGIRLPDNTVIISHPAASLKIPRIIGNDICYIFWIL
                     HIKELESFLFSCKMNQNEAYSEFCKMVDDKSVICMDNETYNVAKKFVRHDLEYPCIVP
                     VMLDNVRYTVKKQLNEKNTLNIAWIGRLSEDKIYALINLMERLEKIRLDDLKIKLHIV
                     GEGPYGAKLFKDYKNFSILTYGSIQPKELSIFLEKNIDLVFAMGTSMLEAEKLGIPSA
                     LVFYTEKITSDNCFLWSFKLKEYCLGMEDKNNYKADIVELESIIGYFLKNIQLYSIEA
                     RKHFEQFLIDKQIYSFVECVNNTEYTNEALRQFYNRHKKLVLKNTKLKNKIYLRLFNH
                     LKRKLTNKGLLFYD"
     gene            complement(3260..4219)
                     /locus_tag="R8X70_000156"
     CDS             complement(3260..4219)
                     /locus_tag="R8X70_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEF2927977.1"
                     /translation="MSKNKPLVSVVMPTFNGSTSGYIKESIESVLRQTYKNFEFIIVN
                     DCSIDDTLNIIQDYASQDDRIRIVNNQTNQKLPQSLNNGFNLANGIYYTWTSDDNYYH
                     ENALEEMVKYLEKNPNKILVCSDYEILGLKSYSRIFKVSAAKEDLISYDSVGACFMYR
                     ADAAKQIGDYNKEEFKVEDYEYWLRLGLIGDFGVIHKILYTYRFQPNSLSMTAKKGEI
                     DNKTNELLYKFLPRYIEKYPNLNLDVISRMRMALVSGLNLKDEVKKIWKTSDRRTKRM
                     IYVFLRDRFANSGKNIYKESIKVLSVKYIVKFYIFCIKHRIKF"
     gene            complement(4212..5333)
                     /gene="wecB"
                     /locus_tag="R8X70_000157"
     CDS             complement(4212..5333)
                     /gene="wecB"
                     /locus_tag="R8X70_000157"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011114925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEF2927978.1"
                     /translation="MKNLLFILGTRPEAIKLAPLILEFKKYPNLYNVIVCNTEQQKEL
                     SNQALNFFGIKADIFLDVMKPNQRLSELQARLLMQLEKIIDQIKIDATIIQGDTMSVF
                     AGALVSFFHKIPIVYVEAGLRSYDLNEPFPEESIRQMTSRIATLHFTPTNEATEALKK
                     EQITSQKIYLTGNTGIDALRLLSENQDTAYGKFWLKLGIDIEKDEVVLVTIHRRENHG
                     DRLVSILKAIEKLSRAFPTHRFVLPVHPNPNIRENVYKHLNKYENIFLIEPIEYPHLV
                     HILKNAKLILTDSGGIQEEAPTFGCPILVLRYETERKEGIKLGFSQLVGTETELIYKK
                     ASDILLLDKKETRIYKENPYGDGIASQRIEKIIRRFLYE"
     gene            complement(5417..5863)
                     /locus_tag="R8X70_000158"
     CDS             complement(5417..5863)
                     /locus_tag="R8X70_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEF2927979.1"
                     /translation="MIHKLADVQSDNIGNNTNIWQFCVVLPNAVIGKNCNICSHCFIE
                     NNVKIGNNVTIKCGVQIWDGITIEDNVFIGPNVTFCNDKYPRSKQYPEEFSKTIIKKG
                     ASIGANATILPGITIGENAMIGAGAIVTKDIADNTVFYLKIGNNLN"
     gene            complement(5853..6269)
                     /locus_tag="R8X70_000159"
     CDS             complement(5853..6269)
                     /locus_tag="R8X70_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxcM-like domain-containing protein"
                     /protein_id="HEF2927980.1"
                     /translation="MITKKINCKLINLKYFDDKNSTLIAIEKQVNCPFEIKRIFYIFD
                     VPKNTIRGEHANLNSEFFFIVLKGECKIKIDNGKEQKKFILNNPKQGLYIDKMLWKQM
                     YDFSKDCILLVLSNTLYDANEYIRDYNEFLKAVDDT"
     gene            complement(6322..7344)
                     /gene="rfbB"
                     /locus_tag="R8X70_000160"
     CDS             complement(6322..7344)
                     /gene="rfbB"
                     /locus_tag="R8X70_000160"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEF2927981.1"
                     /translation="MNNVLITGGAGFIGSNFIEFYCNKYPNDKVVNLDLLTYAGNLEN
                     LKDISSNKNYIFYQGNICDIKLVEKIINTHKINIIIHFAAESHVDNSISSPDVFIKTN
                     VDGTFNLLYSAYKTWFEEPFKAKVGFENALFYHISTDEVFGSLGEEGYFSESTPYAPN
                     SPYSASKASGDMLVRSFHHTYGLNAVISNCSNNYGAKQHDEKLIPTIIRKALNGENIP
                     IYGDGKNVRDWLYVNDHCEAIDKILHFALQSKGNFFDTFNIGGNEEWKNIDIATLICE
                     ILDKKFPKARSHKEQITFVKDRAGHDKRYAIDSSKLQKELRWKPKESFESGILKTIEW
                     YVEKYK"
     gene            complement(7348..8226)
                     /gene="rfbA"
                     /locus_tag="R8X70_000161"
     CDS             complement(7348..8226)
                     /gene="rfbA"
                     /locus_tag="R8X70_000161"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEF2927982.1"
                     /translation="MKGIILAGGSGTRLYPITLTLCKQLLPIYDKPMIYYPLSVLMLA
                     KIREVLIISTPKDTSKFQELFGDGSWLGMEISYCVQEQPKGLAEGLILADNFIKNDDI
                     ALILGDNIFYGQGFSDLLQNAKNDSKNGYASIFSYHVKDPDRFGVAEISKNGEVLSLE
                     EKPQYPKSNYAVTGLYFYDNSAIEIAKSVKPSSRGELEITDVNIEYLKQNRLKSQILG
                     RGFAWIDTGTHDSLIEASEFVQTIELRQGYKIACLEEIAFRNNWIDERRLLDRAKLLD
                     KSGYGVYLRKLLEQGI"
     gene            complement(8236..9072)
                     /locus_tag="R8X70_000162"
     CDS             complement(8236..9072)
                     /locus_tag="R8X70_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEF2927983.1"
                     /translation="MPQLSIIIPLFNSCDFIARALQSCINQTLRDIEILVIDDKSEDE
                     SVKIALELAKKDERIRIFQNDENLGTFATRNLGVLKSRAEFIMFLDSDDFLALNACEV
                     ALAKMKQGFDLLCFDAFVHRVKTKQFYRFKQNEAFNQKEFFEFLGKQRHFCWSVWAKL
                     FRKDLILKSFERINLYERLSYGEDVLFCYMNFLECDKMGVFKECIYHYEFNEKGRYEN
                     KNKEILWQNYKDKKRSNGLIKKLSLESKDDEFCKRLFEVLEKEEEDLKARIAKIDTLD
                     LA"
     gene            9131..10096
                     /gene="waaF"
                     /locus_tag="R8X70_000163"
     CDS             9131..10096
                     /gene="waaF"
                     /locus_tag="R8X70_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEF2927984.1"
                     /translation="MKIFIHLPTWLGDAVMASSALYGVYHYFKNAEFILYGSFVSTAL
                     FKEFPNAKIIVENKKSRYKQALSLRKKLGKIDLALSFRSALSSKIILHILKVKQRYFF
                     NKYDFKEEHQVLKYLYFIENSLEIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
                     SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHILKEKNVKVKNLCN
                     KTTIKTLCQNIVFCDIFITNDSGPMHIAAAYKTKTIAIFGPTKFTQTSPWQNQNAKLV
                     HLNLSCMPCMQKTCPLKHHRCMKDLKPELVIESAKCLHQKLSSTI"
     gene            complement(10072..10632)
                     /gene="gmhA"
                     /locus_tag="R8X70_000164"
     CDS             complement(10072..10632)
                     /gene="gmhA"
                     /locus_tag="R8X70_000164"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEF2927985.1"
                     /translation="MINLVEKEWQEHQKVAKASEILKGQIAKVGELLCECLKKGGKIL
                     ICGNGGSAADSQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGSENDILIGISTSGKSPNVLEAFKKAKELNMLCLGLSGKGGGKMNELCDHNLVVP
                     SDDTARIQEMHILIIHTLCQIVDESF"
     gene            complement(10629..12014)
                     /gene="rfaE1"
                     /locus_tag="R8X70_000165"
     CDS             complement(10629..12014)
                     /gene="rfaE1"
                     /locus_tag="R8X70_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HEF2927986.1"
                     /translation="MLEFLSDQNPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLK
                     EDKRLGGAANVYANLKSLGADVFALGVVGDDESGKFLKENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDTSAILLEDELVELFNKRIENFKAVVLSDYAKGVLTPKVCKAFI
                     QKANELNIPILIDPKGNDFGKYSGATLLTPNKKEALEVLKFENLEGENLEKGIKKLKE
                     DFSLRYSIITLSEAGIAFFDENLRIAPAKALEVYDVTGAGDSVIAVLAFCLASGVEIF
                     KACEIANEAAAIVVSKIGSVSVSFDEMKSFKRVGFEKKIKTKEELLKILEQSDKRIVF
                     TNGCFDIVHFGHIKYLEKAKRLGDILIVGLNSDKSVKRLKGEDRPINSEFQRACMLAA
                     FYFVDFVVIFDEDTPLELISFLKPDILVKGADYKDKLVVGSNLVSRVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            complement(12007..12960)
                     /gene="rfaD"
                     /locus_tag="R8X70_000166"
     CDS             complement(12007..12960)
                     /gene="rfaD"
                     /locus_tag="R8X70_000166"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEF2927987.1"
                     /translation="MKIAITGGAGFIGSQLALNLQDEHEILIIDKMRSYETFENGNLQ
                     SFGHFKNLLDFNGELFVGDINDEKVLRKIEDFKPEVIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIKLHAKLVYASSASVYGDAKSPQTVGKDEEPKNPYAFSKFMMDKLAK
                     KYYDKAHLVGLRYFNVYGKGEFYKNKTASMVVQFAHQILAGKNPRLFEGSDQIFRDFT
                     YIKDVISANLIALESKCGVYNVGSGVARSFQDIVDILQKELHTNLTCEYIPNPYAKSY
                     QFHTQAKLDETWGYKPKFSLEEGIKDYLEEIKRLFEKEVNA"
     gene            complement(12957..13478)
                     /locus_tag="R8X70_000167"
     CDS             complement(12957..13478)
                     /locus_tag="R8X70_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEF2927988.1"
                     /translation="MKRKALFLDRDGIINIDKKYVYKIQDFEFCDGIFELCRYFLTQK
                     YLLFVATNQSGIARGYYTQEDFSKLCDFMLDEFMKENVKIDKIYHCPHLEGCECRKPK
                     AGMLLKAKEEFDIDMDNSIFIGDNISDMQAGKNAQIGTLCLVNEEEKEGDFFRQFKNL
                     NELLDFFKKKEDR"
     gene            13596..13895
                     /locus_tag="R8X70_000168"
     CDS             13596..13895
                     /locus_tag="R8X70_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEF2927989.1"
                     /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGAKADKVYLNK
                     VPALKSISSAERLQYMKEYSEGKRNAYGQGAIMKINLKGLTEEDFKAIEAYIETL"
     gene            complement(13925..14125)
                     /locus_tag="R8X70_000169"
     CDS             complement(13925..14125)
                     /locus_tag="R8X70_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein"
                     /protein_id="HEF2927990.1"
                     /translation="MNSVIMMMIGVSILGFFIILATLLWGIRTKQFDDDYKFTTLNDD
                     EDALRDAIELEKRKKEALKKRK"
     gene            complement(14118..16481)
                     /locus_tag="R8X70_000170"
     CDS             complement(14118..16481)
                     /locus_tag="R8X70_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HEF2927991.1"
                     /translation="MIMKCEHCRLDYQKSQMIEAKGKFFCCRGCLSVWEILHESGLDE
                     FYERLGNNALKPVSLEFSNKNYDEFITKTKEGFSEIYLMIHGIECSACVWLNERVLTK
                     QEGILELDINHLSHKARIVFDEQSVSLAQILNLIESIGYKASAYDPSKNSKKADLIKR
                     EFYSKLIVAIACVMNIMWIAVAKYAGFFSGMDRDIKDILNFAEFILCSPVLFYTGSNF
                     YKSAFKALKMRSLNMDSLVISGASLAYGYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTVDGLNDFLQNEVLVFNGKDFEPKDVQKVNIGDRILLKSGDKILIDG
                     ICKKGEASIDTSSLSGENEPCFVGVGSVVNSACIVLDGSIEYEANKLYKDSKLNQIIR
                     LLEFASTKKARLESLVSQISAYFSRTILTLALLCFFFWLFYHQESVEISLVHAISVLI
                     IACPCALALATPVSNLIALGQALKRAILFKDSSVVEKLSKCDIAVFDKTGVLTQTQLK
                     IAEVFLDERLNLNEFYSFVSLSNHPIAKSVAQFLQDKNAKLLNLDFKGLSNIQAKGIK
                     ACLDNTLFLGGSSKFLEDNGIKCKKEFNNSHFIFARDNEILAYFEFSSVLREGAKELI
                     SYLKQAKIDTMILSGDNERAVEKIAKELGITSFYASCLPQDKMQAIENLSHKKKVLFV
                     GDGVNDALALKYAAVAISLREGSDLAIENSDILLLKNDLLSLKYAIKLSKDTYKIIKQ
                     NLILSLAYNAFTIPLAFLGLINPLIAALSMSFSSIMVILNALRIKNE"
     gene            16594..17892
                     /gene="rho"
                     /locus_tag="R8X70_000171"
     CDS             16594..17892
                     /gene="rho"
                     /locus_tag="R8X70_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEF2927992.1"
                     /translation="MEKEKKQHQRTHIPVEGYKIEDLKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IRKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAMKLTGRILDLFTPIGKGQRGLIVAPPRTGKTELMKELASAIAKNHPEMHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNISDRRIYPAINIIKSGTRKEELLQGVAELQ
                     KIWAIRSAISQMDDIEALKFLYSKMLKTKDNVELLSIMNE"
     gene            17895..19451
                     /locus_tag="R8X70_000172"
     CDS             17895..19451
                     /locus_tag="R8X70_000172"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEF2927993.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSTSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCDNGPSDTPCGTCKQCLAALEGKHIDIIEMDAASNRGLED
                     IQALIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQNEILNHLKEILNKENVKFEEEALKFVARSGNGSLRDTLT
                     LLDQAIIFCQNDISTSKITDMLGFLDPAKIKEFYHAILTKNKDRVFDFLEELKDYEAS
                     SVIDEMLFYLKESFFAKSSEFSTLIYERFFRILARAKNLICDDDGFTLCVMAFMMMEA
                     SHLKEIDTQINEIQKNLTNTNSNLEKQEVKTPIVLEIQKSSTIKNAYEILLEKIYDRD
                     YELGECFKQSTQFISYENEILTISSNAQGSNRDKLNKGFKLIQELFRNHFGSNAKIVV
                     QKAIIIDESKLQSLTQELPQQNNEAQAPKKIDLHSSFNELKQGAKKFDPQEDTKEALR
                     EYFGEPKIEN"
     gene            complement(19463..21586)
                     /locus_tag="R8X70_000173"
     CDS             complement(19463..21586)
                     /locus_tag="R8X70_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002833017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEF2927994.1"
                     /translation="MQEFRVKIGKMTCVNCSNAIERACKKIQGVSDASVSYVNSSGVF
                     LLEDEARSQDVIEKIQSLGFEILENEQNLEEYRKKELISLRKNLLLSIVLSALIMYFE
                     MFDTSFLSQNMQMLLSFFVIFYCGRTFFSHAIKGLKNWNLDMNTLIALGCISAFAYSF
                     CIYLNLFEDEKHLYFSGAAMIISFVLLGKFLETNAKFKALNYQKRLNEIDIKKAKILN
                     EAGELNEILSAFVKNGDIIVVREGESVAVDGVVIQGKAEIDTSFLSGEFLPSSVRVDD
                     EIKAGSILLNGNLHIKASKKAMDSTLEQIKDLVFKAGNVKTPLENSVDRISRYFVITI
                     IAFALAVFVFWSFKVGVSEAFLHACAVLLISCPCALGLATPIALITAQGAAMKNFILI
                     KNPAALENLNKIKTAFFDKTGTLTQNNLELFRHNLNAKDFQMLALIESSSSHPIAKAI
                     FEASKIKAQILKGSSEIFIGKGVKYIEENEEYLLGNLKFMQESGVKNLEKADEFLQSL
                     KEEALICVYFAKNGECLGVLTLKNTLKEGAKELIEDFKKQKIQSIILSGDNEKSVQSV
                     ANLLGIADFKAGLLPEEKLQIIKEHKQNSLFVGDGINDAAALNLASVSMSFKEGSDLA
                     KNAGDFILMKDDLRLISWCFKLAKKTKNIIKLNLFWAFFYNILCIPIAAGFVPFITLS
                     PHLAALAMCFSSLCVVLNSLRLRKV"
     gene            complement(21586..21789)
                     /locus_tag="R8X70_000174"
     CDS             complement(21586..21789)
                     /locus_tag="R8X70_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEF2927995.1"
                     /translation="MKFKVANINCQNCANLIKNSLEDIFGEIKIDLDANPRTLSLNLD
                     SSREEEFKKELGELGFEVLEKIE"
     gene            complement(21779..22720)
                     /gene="czcD"
                     /locus_tag="R8X70_000175"
     CDS             complement(21779..22720)
                     /gene="czcD"
                     /locus_tag="R8X70_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HEF2927996.1"
                     /translation="MYEFLLHEPLANKSKHNHEDHSHEHHHADARSVDKKILKISLLM
                     TFSMMLVQFIYSLLSNSLALLSDTLHMFSDVFALTLSFLAIIAIEKWQDHQKTFGYFR
                     LEILVAFINALTIILSAIFIIYEAIEKLINPSSIDAKTMIIVAVLGFLVNAINAFMMF
                     RGANLENVNMKSAFLHMMSDLLGSLVVIIGGIAVYFSGIVYIDTILAIILSLLLLRWA
                     ITLLKQSVNILLETSPVDIEEVKQALLLNSKVEEVIDLHITQITNKMLVASMHLRVNI
                     DDLKEFEQLSYDLSHDLLHRFEIGHITIQPLRSKNEI"
     gene            complement(22795..23064)
                     /locus_tag="R8X70_000176"
     CDS             complement(22795..23064)
                     /locus_tag="R8X70_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HEF2927997.1"
                     /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERST
                     PNTASFNQAPRQEPRYNDHSYSHQSHDHYYKKKKRESWLGELFDF"
     gene            complement(23122..23616)
                     /locus_tag="R8X70_000177"
     CDS             complement(23122..23616)
                     /locus_tag="R8X70_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEF2927998.1"
                     /translation="MIEFILKDMFFAAMAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLIEYFHFETLAIATFVASFCVGCLGIALAKIIKTPAEVIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTLSVTLALAIGVSVTLLIFFEQSFMMTRH
                     AKKH"
     gene            complement(23613..24389)
                     /locus_tag="R8X70_000178"
     CDS             complement(23613..24389)
                     /locus_tag="R8X70_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HEF2927999.1"
                     /translation="MQKPDIQSLTNFLIDYTKTLLSAGTYTARVAKCVGRIAQVYGYE
                     ININFFFHHITLNIVDIEDNSIQRTYVIPNHHAHINFKLIFELSALSWAIYDHKYELE
                     KAKSAFNAISIQKKHSYVLNLLFVSIANSGFCRLFGGDFGAGVLVFFATFLGLLLRFA
                     LTKIKIDLRIQYILCSFVSSWFVFLGLDMGYTNTSDAALGSSILYLIPGVFFINSIID
                     ILKDHILMGLSRIISVAILICCIALGIYMTLSISKFGILQ"
     gene            24455..25378
                     /locus_tag="R8X70_000179"
     CDS             24455..25378
                     /locus_tag="R8X70_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEF2928000.1"
                     /translation="MSKIGIVGLGFVGAASAYNIVVQNICSELYLYDIKQDLALAHAR
                     DLEDMSAIHSSYTRIIHATNLEQLASCDIIILAFRKENLKELSSRLVELQNNITELKD
                     IVLSLKHANFKGKYIVATNPNDTITYYTQILSSLPKNHVFGSGTNLDSSRLKKILAKD
                     LDLNPKDITAYMIGEHGDSQFAALSTASVLGQNLLTFCDKMGKKLDIENIEKAVVDEG
                     YFIYKRKGRTEFGIGTSCANLAKAVLEDRKSLHPVSVVFDDLAFSLPAIIGKNGVEKI
                     FGLDFNEREKIKLENSKLQIKNAIQSVSDKI"
     gene            complement(25375..25980)
                     /locus_tag="R8X70_000180"
     CDS             complement(25375..25980)
                     /locus_tag="R8X70_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEF2928001.1"
                     /translation="MQEIIHFIIETAGDWGYLGIIILMTLESCFIPFPSEVVMIPAGY
                     LAHKGELDIVFCILSGVLGSVLGALINYYICFFWGKKFVLRWGKYFGINEAKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLVNFVLFTALGSAIWVSILAFLGYY
                     IGENEELIKAYLTQILIVIIIFIVLASLIYIKIKKPFAKKA"
     gene            complement(26145..26627)
                     /locus_tag="R8X70_000181"
     CDS             complement(26145..26627)
                     /locus_tag="R8X70_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEF2928002.1"
                     /translation="MIKTIDTSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGIGGPGYEIICECDDQEHKHERGTLSMAHA
                     GRDTGGSQFFICHSPQAHLDGVHTVFGQIDPKDEESLEVLDSIRQGDKIIDIKICDKI
                     "
     gene            complement(26637..27344)
                     /locus_tag="R8X70_000182"
     CDS             complement(26637..27344)
                     /locus_tag="R8X70_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEF2928003.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEE
                     LEQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEDDDDVQAVYTNID"
     gene            27453..27794
                     /locus_tag="R8X70_000183"
     CDS             27453..27794
                     /locus_tag="R8X70_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEF2928004.1"
                     /translation="MNIAKKELFIAWFFLIAAIVFEVLGTSFLKMENQILGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQFLGIVLSIVG
                     IIMINIGEVKE"
     gene            27794..28102
                     /locus_tag="R8X70_000184"
     CDS             27794..28102
                     /locus_tag="R8X70_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEF2928005.1"
                     /translation="MYIFIIVLSALLDIVANLLLKKSDGFKHKIWGLAAIVNAILAFF
                     LLSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY
                     "
     gene            complement(28120..29712)
                     /locus_tag="R8X70_000185"
     CDS             complement(28120..29712)
                     /locus_tag="R8X70_000185"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEF2928006.1"
                     /translation="MKNIIFNEIKKILECDFALENPKDKNLAHFATPLAFSLAKELKK
                     SPMLIASDLASKFQNHDCFESVEAVNGYLNFRISKTFLNELANQALTNPNDFAKGEKK
                     QESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLL
                     GLSILLSVKENTLHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAK
                     DKMLVLIKQNLEQAKIKIDSYVSERSYYDALNATLESLKEHKGIYEQEGKIWLASSQK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFL
                     GFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNL
                     LFEALNLKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSANENDLLKLFSL
                     VALSIKTAFSLMGIEAKNKMEH"
     gene            complement(29724..29963)
                     /locus_tag="R8X70_000186"
     CDS             complement(29724..29963)
                     /locus_tag="R8X70_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEF2928007.1"
                     /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     NNDDEVAKNTQKIEENKNTTNNTNTDASIDETKKA"
     gene            complement(29965..30582)
                     /gene="gmk"
                     /locus_tag="R8X70_000187"
     CDS             complement(29965..30582)
                     /gene="gmk"
                     /locus_tag="R8X70_000187"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEF2928008.1"
                     /translation="MSAFILLVSGPSGAGKSTLLKKLFDEFQEELYFSISSTTRLPRE
                     GEQHGVDYYFITHDEFQQGIDKEQFLEWAKVHENFYGTSLEHIQNALNDGKIVVFDID
                     VQGFKIVKKKMAEKIISVFITTKNKDELKKRLIKRNTDTILQLEKRLQNASDEMKELN
                     EYDYFIINDKLEESYEALRAILIAHKFKTKGQNLEQIQNIWNEGE"
     gene            complement(30579..32132)
                     /locus_tag="R8X70_000188"
     CDS             complement(30579..32132)
                     /locus_tag="R8X70_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928009.1"
                     /translation="MKILLLNENPVVSRLISLSAKKMSYDFEEINAYDENLGHYDVII
                     VDSDTPAPLKILKEKCDKLIFLAPRNQSADIDALILHKPFLPTDFLNLLNQENLKIAD
                     DIILPIEEAENPYANISLDLDGLNLDDLPDENTEDTQENELSMEENLESLALYDMEEE
                     TNQKEIASENTDKELNLDDLSLDEDQEENDASEQTTANHIEEKNEDEQALEVAFQDDI
                     LNDKTSEENEEEFEIQEQDTQEQDANQDEQDKIEDTQELEDQVDNLNGDLVQDNENSE
                     AQEAIVNNNLDAEEAQPEVLEDAEEPSKTQLQDFITDDFPIVEEQERKIDFDDIPEDA
                     EFLGQRKEEDEAVEDFLPVVEDQENLNEHDDFEEMSSLSTQDQIKEELAQLDELEYDI
                     DSDDNIKVLEDFKEEPILDDKDLPNNDEEIVVPKLQINDFDSLKESDIQEALGEEIST
                     LEDNKSEKLKIKEDQLASEAGEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNINI
                     SISFNEDKN"
     gene            complement(32188..32955)
                     /gene="fliR"
                     /locus_tag="R8X70_000189"
     CDS             complement(32188..32955)
                     /gene="fliR"
                     /locus_tag="R8X70_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HEF2928010.1"
                     /translation="MEFVNYLGDKNVATFMLLFARMSGLIVFFPFFSHNSIPMIIKTT
                     FALFLTMYLFPLAKLEILHLDSFFIIQLLSEIVFGMIAGLMLQIVFAIVMMAGEQIAF
                     TMGFTMASVLDPSSGTNMPITSQILHLIALLFFLAFDGHHLMLLFLSHSLGYINLGGF
                     YPHENLMHYLNMGMLNIFIIGFTMSFPILGISLLADTIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLIAILLVMMQYFKDLILEVFTHMQTLFFA"
     gene            complement(32942..33577)
                     /locus_tag="R8X70_000190"
     CDS             complement(32942..33577)
                     /locus_tag="R8X70_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928011.1"
                     /translation="MELLRVENLGHSFDYPLFENLNFSLNQKDCITIQGSSGCGKSTL
                     LHIISSLLKPNKGEVFFKGQNLYKISENERLKIRRYDLGIIFQTHYLFKGFSALENIE
                     LASVLSNQDLDEKILKKLGIHELLKQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLVSYAKENDAALFFVTHDSKLAQFCDKTYILNTNGIC"
     gene            complement(33587..34660)
                     /locus_tag="R8X70_000191"
     CDS             complement(33587..34660)
                     /locus_tag="R8X70_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEF2928012.1"
                     /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QNNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFASLKASANGVVNGYIHT
                     NGRVGVIIAAACDNAEVANKSRDFLKQLCMHIAAMKPSYLSYEDLDIEFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPKFASRKQLSDAILKEAEENIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVMDDKKTIEQVIAEKEKELGGKIKIVEFI
                     RFEVGEGLEKKTEDFAAEVAAQL"
     gene            complement(34660..35451)
                     /gene="rpsB"
                     /locus_tag="R8X70_000192"
     CDS             complement(34660..35451)
                     /gene="rpsB"
                     /locus_tag="R8X70_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEF2928013.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALPSEEKEITDEEKKEVLDEAMSEEDFNGEQE"
     gene            complement(35568..36731)
                     /locus_tag="R8X70_000193"
     CDS             complement(35568..36731)
                     /locus_tag="R8X70_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEF2928014.1"
                     /translation="MLEKQMIKFILSKWNYGNFRIVFWDQEEFYVGNQPAKFSLIFKE
                     KIPLLKLFSDTSLVFAKHYMESKLEIEGDYDEIAKVLYYFSNKRFLKNKEDILSKIAQ
                     KEESKNIKSHYDIGNDFYRLWLDDTMSYSCAYFKTSSDTLYEAQINKIEHTLKKLDLK
                     PNEKLLDIGCGWGWLSIMAAQKYGVKVVGVTISEEQCKKAQERVRELKLEDRVEIRLQ
                     NYQDLEFEDYFDKVVSVGMFEHVGKENLGLYFMKAKQVLKPGGSMLLHSILAMFEGKT
                     NAWIDKYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRIHYAKTLDIWSENFNQVLPQ
                     VREKYDEEFVRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKEYIYK"
     gene            complement(36857..37981)
                     /locus_tag="R8X70_000194"
     CDS             complement(36857..37981)
                     /locus_tag="R8X70_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEF2928015.1"
                     /translation="MRELKIFLVVVVFTALVYWGVEPYAHSVMKPHVAPANFDYAAED
                     TAYAKGIIAEKEIALEDAKKSNDAKRIESAQKDLDKAKENLAKVEELWADVAKIDFTK
                     GNAAKGKEFFNNNCFACHGVKEDDIAANITDSSLGVIPPDLSSAGVIFDEKFLAALIM
                     NPALALKVDHKFGDAFIMTAYNSEVSGDSEELVNANIADVIAYLKEVGLKFEAKENAT
                     IKQEAELKYSKIEDANEKSALVEKEIAFAKDKSTFIEACGRCHDIKYDNFFTPSNHND
                     LANYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEDAQVKVVSYLE
                     KVGDSKKEERESTGIYIMIFFVILSIFAIGWKRSVWSKLH"
     gene            complement(37978..39228)
                     /locus_tag="R8X70_000195"
     CDS             complement(37978..39228)
                     /locus_tag="R8X70_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEF2928016.1"
                     /translation="MAHIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFTVLFITGLLLVMYYKPDTALAFDSVNKTIMQEVEYGWLWRHMHGVAASVIF
                     LIIYIHMLTGIYYGSYKRGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPLIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPH
                     VNNEIAEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYICLFMIFFFYLVSFKF
                     GFAMDPINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQ
                     IIFFLLPWLDRSNVVKPAHERPLFFIWFWVLLIDLIVLTIYGKLPPTGVNAWVGFYAS
                     IIFLLLFIVVLPVITIMERKGAKQ"
     gene            complement(39230..39733)
                     /gene="petA"
                     /locus_tag="R8X70_000196"
     CDS             complement(39230..39733)
                     /gene="petA"
                     /locus_tag="R8X70_000196"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEF2928017.1"
                     /translation="MATSESRRSFMGFAFGTVAAVGGVFSLVAVKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDPNMEKDTKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYHASEQLFKCACHGGEFDTSGKNTFGPPPRPLDIPPFKIDGTKLVLGEEGPEY
                     KKMTEEA"
     gene            complement(39823..41091)
                     /locus_tag="R8X70_000197"
     CDS             complement(39823..41091)
                     /locus_tag="R8X70_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEF2928018.1"
                     /translation="MLASVIFIITLILLFWRPWNLPLWLISIFGALFAFIFKLVNLED
                     AFFVFDLVWDSSLTLVGLIILSFSLEVLGFFSFIAIRILRLSKLKNSHAIHTKKLMLF
                     MLVFVFCLSALFGNDGAILIITPIVLALFSTLKNYKESAILSAFLLSVSFLCDASSNA
                     LIISNLTNIITANYFNLDFLEFAKTMFLPNLFVLLSTIIMVFLIFAKILPKGLEINIL
                     SNDCISVKLFIFCVIYLIFFVSSFFIGEIYNLNASFFAVSGALLFWFFVCFLKKREAL
                     KIIKNVPWGIFAFSFGLYMVVFALHKVGISDILIFIYDILAQNAITAIFGTGFISAFL
                     SSVFNNLPMALIGDLALKNFPQSMVYAHLLGVNIGPKLTPIGSLATLLWLGLLAKKGI
                     EISFWKYCKFGFLITLPVLTCSLFALVLQY"
     gene            complement(41091..42950)
                     /gene="mnmG"
                     /locus_tag="R8X70_000198"
     CDS             complement(41091..42950)
                     /gene="mnmG"
                     /locus_tag="R8X70_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEF2928019.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVRGSRAQIDMDKYRIV
                     ARNKLLKLKNLEISQEQVCELIYENGSVVGVKTNLQNTYEAKKVILTTGTFLNGLIHV
                     GENKLTAGRVGELASVNLGQNLLSTSLKMGRLKTGTCPRVDAKSIDFDVLEIQYGDQN
                     PKAFSFRTKNFNPIQLPCYIARTNLNTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIED
                     KINRFSEKESHHLFIEPQTIDATEYYINGFSTSLPYEVQIQMLRSVKGFEESKITRFG
                     YAIEYDYIEPTELYHTLETKKIKNLYCAGQINGTTGYEEAAAQGFMAGVNAVLALDNK
                     EPFILRRDEAYIGVLIDDLVIKGTKEPYRMFTSRAEFRLLLREENAIVRLGKYGKGLG
                     LLEDESYQFIENIRLNTQKGLELLLEKEFTPNTENNAFLASIGEEKITSIVNLQKIVA
                     RSSFDIEKLKKLNTIFENMDEYSLREILNEAKYYHYIAMQKSQVEKMKNLIDMKIPSD
                     FDFTSVSGLSNEVVEKLQKHKPLTLFAASEISGITPAALDILQIYIKMQKKKS"
     gene            complement(43037..43534)
                     /gene="cetB"
                     /locus_tag="R8X70_000199"
     CDS             complement(43037..43534)
                     /gene="cetB"
                     /locus_tag="R8X70_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetB"
                     /protein_id="HEF2928020.1"
                     /translation="MSREIFLQEDSLITSKTDLKGRIVYANDDFLKYAGYTMGEVLNK
                     PHNIVRHEEMPKTVFKYLWDYMREGREIFAYVKNKTKDNNYYWVFANVTPSIDINNNI
                     IGYYSVRRMPNKSAISTIESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFS
                     LQETR"
     gene            complement(43552..44931)
                     /gene="cetA"
                     /locus_tag="R8X70_000200"
     CDS             complement(43552..44931)
                     /gene="cetA"
                     /locus_tag="R8X70_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetA"
                     /protein_id="HEF2928021.1"
                     /translation="MMKNGLLSTIFLSVIGVLGVIFIHIFVGVIIFVLIAVLMIYLLR
                     QHKDEQIMIDKLLVLCRELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLRE
                     INTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLMD
                     LSLGNQNKDMSQISSSLNQDISMMKNVYDTVDAISHTATENGSEVDSLQNAMGSLMDV
                     VNLSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKRL
                     EENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQD
                     ERAQGVINELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQRS
                     AEILAKLKI"
     gene            complement(45049..>45521)
                     /locus_tag="R8X70_000201"
     CDS             complement(45049..>45521)
                     /locus_tag="R8X70_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEF2928022.1"
                     /translation="DALVTSKTDLKGNIIYANNDFLKYAGYSVGELLSKPHNIVRHED
                     MPRTVFKCLWDYVQNGKEIFAFVKNKAKDGRYYWVFANVSASFDANGNIINYYSVRRA
                     PNRKSLSIIEEIYKILLEKEQKSGINAGVSALMDIVSSYKMTYNELVFHLQENN"
BASE COUNT        15631 a         8352 c         5820 g        15718 t
ORIGIN      
        1 cataaaaaat attaaggttt atataaatgg aagagttaac catcgttact gctttttata
       61 atgtaggtag aaccacaaga agcaatgaac aatacttgtc ttattttgat ttttgggcgg
      121 gtttaaaaaa caaagtaatc atttatacta cggatgatat gaaagaatct attttagaga
      181 ttagaaaaaa acacaatcta gaagataaaa ccatcatcat tacaaaagat ttgaaagaat
      241 ttgatgagca aagccttgaa aaaatcaaag acactttcaa caaatatgat caaactctaa
      301 atagaaaaaa tccaagaaat atcgagtgca acaatccatt atattgctat ttaatgtatt
      361 taaaaccttt ttttgttgtt gatgccatag aaagaaattt aaccggcgaa aatgtaatgt
      421 ggcttgattt cggatttaat catggagatg aatttttcac aaacagagca caatttaatt
      481 ttttactaga aaaacaagaa attatcaatg aagaaaaaat taactttttt tccgttaagg
      541 aagaggaata taaaaatatt gctaatgtat atttcaatat ggaacctttt ataatggggg
      601 ggctgatttt tactaaaagt aaaaattggt atattttcaa agaacatatg aaaaatgcct
      661 taaatgcttt tttatctttt ggaatggttg acgatgatca aattatgtat ttatggtgca
      721 caagaaatca ctcgaataac tacaaaataa tacgatctta tgagtggttt gacgctttgt
      781 ttaattttat cccaattaaa attaaacaaa aattaagctt caaaagaaaa aatagtaaat
      841 attataaaat catcaaagag gaaatcaaaa attctaaaaa taaaaatttg atatacaaaa
      901 tacaattata tatcaaatat atctattata aatttataaa taaaaaatga taaaactata
      961 attttttcca actatttata atttttgctg tttcgctaat ttcatcttgc gtcattacgg
     1021 gtgaaattgg caaagataaa acttcagcat gaatctgctc tgttattggg aaatttaaat
     1081 gattgtattc tttataacac tcttgtttat gtggcggtat gggataatga attaaagttt
     1141 gcaccccatt tttcatcaaa tactcttgta aatcattgcg atttttagta cgaataacaa
     1201 aaagatgcca aacatgattt tcttcttctt cataaaaagg caaaattata tctttatgtt
     1261 ttatattttc taaataatat ttagcaatct ttcttctttt tcgattgtcc tcatctaaat
     1321 attttaattt gatatctaaa attcctgctt gaatttcatc aagtcttgaa tttaaacctg
     1381 tataaagatt ttcatatttt ttatgagaac cataatttgc taaagctcta atttttaaaa
     1441 taagtttttc atcattactc actacacatc caccatctcc tagtgcacct aaatttttac
     1501 caggataaaa tgaaaaagct gccgcatcac ctaaatttcc aactcttttt ttatcataca
     1561 ccgccccatg tgcttgagcg caatcttcta tgattttaag attatatttt ttggctattt
     1621 tttgtatttt agacatatct gttgctaagc cataaagatg caccaccata atagcctttg
     1681 ttttagaagt gattttttcc tcaatcaaat cagggtttat attataagta tttatatcag
     1741 gctctacaaa aataggcttg caaccattat cggttatcgc taaaacagaa gcaatatagg
     1801 tatttgcagg aactataatt tcatcttcat tgctaaatcc ataagctttg ataataagtc
     1861 ttaaagcatc aagtccattt gcaacaccga cacaaccttt tacaccgcaa tatgcagaga
     1921 aattctcttc aaaaatttta ttttgctcac ccagaagaaa ccatccgctt tgtaaaactt
     1981 ctctaaattt gttttcaatt tcttccttaa agcgcaaatt tatcttttgc aaatctaaaa
     2041 aattaatcat aaaataataa tcctttgttg gttaacttcc tttttaaatg attaaacaat
     2101 ctcaaatata ttttattttt taattttgta ttctttagga ctaatttttt atgcctatta
     2161 taaaattgtc ttaatgcttc atttgtatat tctgtattat taacacattc tacaaaacta
     2221 tatatctgtt tatcaattaa aaactgttca aaatgtttcc tagcttcaat agagtataat
     2281 tggatatttt ttaaaaaata tccaattatg ctttcaagtt caacaatatc tgctttataa
     2341 ttatttttat cttccattcc taggcaatat tcctttaact taaaactcca taaaaaacaa
     2401 ttatctgatg tgattttttc agtataaaat actaaagccg aaggaattcc tagtttttca
     2461 gcctctagca tagaagttcc cattgcaaat actaaatcta tatttttttc taaaaatata
     2521 gacagctctt taggctgtat tgagccatat gttagaattg aaaaattctt ataatcttta
     2581 aataattttg ctccataagg cccctctcca acaatatgca actttatttt taaatcatct
     2641 aatcgaattt tctctaatct ttccatcaaa ttaattaaag cataaatttt atcctcactt
     2701 aatcgtccaa tccaagcaat attaagagta ttcttctcgt ttaattgttt ttttactgta
     2761 tatctaacat tatcaagcat aacaggcaca atgcaaggat attctaaatc atgacgcaca
     2821 aatttctttg caacattata agtctcatta tccatacaaa taacactctt atcatcaacc
     2881 attttacaaa attcactata agcttcattt tgattcattt tgcaactaaa taaaaaactt
     2941 tcaagttctt ttatatgcag tatccaaaaa atataacaaa tatcatttcc tataattctt
     3001 ggaattttca aagaagcagc tggatgcgat ataatcactg tattatcagg aagtctaatg
     3061 ccatcattta caacaacaaa tctgattttc tgttgtaaat gtaacaaagc tatatcatcg
     3121 caaagcccta tataacctat ctctatatca ttggaatact gagctagata gttagctact
     3181 cttataaata ataattcggc accgccaagt attttactag gataaaaaaa ataaacattt
     3241 ttttgcatag ttacattaat caaaatttaa tcctatgttt tatacaaaaa atataaaatt
     3301 tgacaatata tttcacgctt aaaaccttga ttgattcctt atatatattt ttaccagaat
     3361 ttgcaaaacg gtctcgtaaa aatacataga tcatcctttt tgttcttcga tcgctcgtct
     3421 tccatatttt tttaacttca tcttttaaat ttaaaccgct cacaagagcc attctcattc
     3481 ttgaaataac atctaaattt aaattgggat atttttcaat atatctaggt aaaaatttat
     3541 ataacaattc atttgtttta ttatcgattt cgcctttttt tgcagtcatt gataaactat
     3601 ttggttgaaa tctatacgta tataaaattt tatgtattac tccaaaatca ccaattaacc
     3661 ctaatctcag ccaatattca tagtcttcta ctttaaattc ttctttattg taatcaccaa
     3721 tttgtttagc agcatctgcc ctgtacataa aacaagctcc aacactatca taagaaatta
     3781 aatcttcttt tgcagcactt actttgaaaa ttcttgaata cgatttcaat cctaaaattt
     3841 catagtcgct acataccaaa attttattag gatttttttc taaatacttc accatttctt
     3901 ctaaagcatt ttcatgataa taattatcat cagaagtcca agtgtaataa atcccattag
     3961 ccaaattaaa accattattt aatgactgcg gcagcttttg attggtttga ttattcacta
     4021 tacgaattct atcatcttga ctagcataat cttgtataat atttaaagta tcatctatag
     4081 aacaatcatt aactataata aattcaaaat ttttataagt ttgtcgcaaa acactttcta
     4141 tagattcttt aatatatcca cttgtagatc cattaaatgt tggcattaca acactaacta
     4201 aaggtttatt tttactcata taaaaatctc ctaataattt tttctattct ctgacttgca
     4261 attccatcac cataagggtt ttctttataa atgcgcgttt cttttttatc taataataaa
     4321 atatcagaag cttttttata aattagttct gtttcagttc caaccaactg tgaaaaacct
     4381 agttttatac cttctttgcg ttcagtttca taacgcaata ccagaatggg acaaccaaaa
     4441 gttggtgctt cctcttgtat accaccgcta tctgttaata ttaattttgc attttttaga
     4501 atatgtacta gatgagggta ttcaataggt tcaatcaaaa aaatattttc atatttattt
     4561 aaatgtttat agacattttc tctaatatta ggattaggat gaacaggcaa aacaaaccta
     4621 tgtgttggaa atgctcgaga tagtttctca atagctttca gtatgctaac aagtctatca
     4681 ccgtgatttt ctcttctatg gatagtcact agcactacct catctttctc aatatctatc
     4741 cctaatttta accaaaattt accatatgct gtatcttgat tttcactcaa tagtcttaat
     4801 gcatctatac cagtattacc agttaaataa attttttgcg aggtaatttg ctcttttttt
     4861 aatgcttctg tagcttcatt agtaggagta aaatgcaagg tagcaatcct actagtcatc
     4921 tgtcttatac tttcttcagg aaaaggttca tttaaatcgt aagatctcag tcctgcctca
     4981 acataaacta taggaatctt gtgaaaaaaa cttactaatg ctccggcaaa aacactcata
     5041 gtgtcacctt gaattatagt tgcatctatt tttatctgat ctataatctt ctccaattgc
     5101 attagcaatc ttgcttgcaa ttcacttaaa cgttgattcg gtttcataac atctaaaaat
     5161 atatcagcct taattccgaa aaaatttaaa gcttgattag aaagctcttt ttgttgctct
     5221 gtattgcata caataacatt atataaattt gggtattttt taaattccaa aataagagga
     5281 gctaacttaa tcgcttctgg tctagtacct aaaataaaca gcaaattttt catttttttc
     5341 tcattgataa tgatatttac ccaaatccta aatctattgg ttatgtgatt ataacatttt
     5401 taatttttaa tatactttaa tttaaattat tacctatttt taaataaaaa actgtgttat
     5461 ctgcaatatc ctttgtaaca attgctccag ctcctatcat tgcattttca cctatggtaa
     5521 tgcctggtaa aatagttgca tttgctccta tgcttgcgcc ttttttaata atcgttttgg
     5581 aaaattcctc aggatattgt ttagatcttg ggtatttatc attacaaaaa gttacattag
     5641 gacctataaa aacattatct tctattgtta taccatccca aatttgaaca ccgcatttaa
     5701 ttgtaacatt atttccgatt ttcacattgt tttcaataaa acaatgtgaa caaatattac
     5761 agtttttacc tatgactgca tttggaagca ccacgcaaaa ttgccaaata tttgtattat
     5821 ttcctatatt atcactctga acatctgcta atttatgtat catctactgc ctttaaaaac
     5881 tcattataat ctctaatata ttcatttgca tcataaagag tattgcttaa aaccaaaaga
     5941 atacaatctt tactaaaatc gtacatttgc ttccataaca tcttatctat ataaagacct
     6001 tgttttggat tatttagtat aaattttttt tgttcttttc cattatctat tttaatttta
     6061 cattcaccct ttaaaacaat aaaaaaaaat tcagaattta aatttgcatg ctcccctcta
     6121 atagtatttt taggaacatc aaaaatataa aaaattcttt taatttcaaa aggacaattt
     6181 acttgcttct caattgctat caaagtagaa tttttatcat caaaatattt cagatttatt
     6241 aatttacaat ttattttttt tgtaatcatt tttgccctat tacctttatt aaactatttc
     6301 gtaagttttt tattattatt ttcatttata tttctccaca taccattcaa tagtttttaa
     6361 aattccactt tcaaaacttt ccttaggctt ccatctaagc tctttttgca attttgaaga
     6421 atcgattgca taacgtttat catgccctgc cctatctttt acaaaggtaa tttgctcctt
     6481 atgggatctt gctttaggaa attttttatc taaaatttca caaattaaag tagcaatgtc
     6541 tatatttttc cattcttcat tgcctcctat attaaaagta tcaaaaaaat ttcctttact
     6601 ttgcaaagca aagtgtaaaa tcttatcaat cgcctcacaa tgatcgttta cataaagcca
     6661 atctctaaca ttttttccat caccatagat aggaatattc tccccattta atgccttgcg
     6721 aattatagta ggaataagct tttcatcatg ttgcttagct ccataattat tggagcagtt
     6781 ggaaatcacc gcatttaagc cataagtatg gtgaaatgat cttactagca tatcaccaga
     6841 agccttagaa gcagaataag gagaatttgg agcatatgga gtactttcgc taaaatatcc
     6901 ttcctctcct aagcttccaa aaacttcatc ggtgctaata tgataaaata aagcattttc
     6961 aaatcctact ttggctttaa aaggctcttc aaaccatgtt ttatatgcac tatataaaag
     7021 attaaaagta ccatcaacat ttgttttaat aaacacatcg gggctgctga tggaattatc
     7081 cacatgagat tctgcggcaa aatggatgat aatgttaatt ttatgtgtat taataatctt
     7141 ttcaaccaat tttatatcac aaatgttacc ctgatagaaa atatagtttt tattactgct
     7201 gatatctttt agattttcta aatttccagc ataagttaat aaatcaagat taacaacttt
     7261 atcatttggg tatttattac aataaaattc aataaaattc gaacctataa atcctgctcc
     7321 acctgtaatt aaaacattat tcatctttta aataccttgc tcaagtagtt ttctaagata
     7381 gactccgtag ccacttttgt caagcagctt tgcgcgatct aacaatcttc tctcatctat
     7441 ccagttattt cgaaaagcaa tttcttccaa acatgcaatc ttgtatcctt gtctaagttc
     7501 tattgtttgc acaaattctg aagcttctat taagctgtca tgcgtacctg tatcaatcca
     7561 agcaaaacct cgtcctaaaa tttgcgactt taatctattt tgtttcaaat attctatatt
     7621 aacatcggta atttcaagtt ctcctctaga gctaggtttt acactttttg ctatttcaat
     7681 agctgagtta tcataaaaat aaagcccagt taccgcataa ttgctcttag gatattgagg
     7741 tttttcttcc aaacttaaaa cctcgccatt tttagaaatt tcagctacac caaaacgatc
     7801 cggatctttt acatgataag aaaatatact agcatagcca tttttagaat catttttagc
     7861 attttgcaac aaatcgctaa atccttgtcc atagaaaata ttatccccta aaattaaagc
     7921 tatatcatca ttttttataa aattatccgc taaaataagt ccttctgcta agccttttgg
     7981 ctgctcttgt acacaatacg aaatttccat gccaagccaa gagccatcac caaaaagctc
     8041 ttgaaattta ctcgtatctt taggtgtgga gataatcaag acttcgcgaa ttttagccaa
     8101 catcaaaaca gatagaggat agtaaatcat gggcttatca taaattggca aaagctgctt
     8161 acataaagtt aaagtgatag gataaagcct cgtaccacta ccaccggcta aaataattcc
     8221 tttcaaacac actcctcaag caagatctaa agtatctatt ttagcaattc tagcctttaa
     8281 atcttcttcc tctttctcca aaacctcaaa caatctttta caaaattcat cgtcttttga
     8341 ttccaaagaa agctttttta taagcccatt gcttcttttt ttgtctttgt aattttgcca
     8401 caaaatttct ttatttttgt tttcatatct acccttttca ttaaattcat aatgataaat
     8461 gcactcttta aaaacaccca ttttatcgca ttctaaaaaa ttcatatagc aaaaaagcac
     8521 atcttctcca tagctcaaac gctcgtataa atttatcctt tcaaagcttt ttaaaatcaa
     8581 atctttccta aaaagcttcg cccaaaccga ccaacaaaaa tgcctttgct tgcctaaaaa
     8641 ttcgaaaaat tctttttgat taaaagcttc attttgttta aaacgataaa attgtttggt
     8701 tttgactcta tgtacaaaag cgtcaaaaca aagcaaatca aagccttgtt tcatcttagc
     8761 taaagccacc tcacaagcat ttaaagccaa aaaatcatca ctatctaaaa acatgataaa
     8821 ttcagctcta gattttaaaa ctcctaaatt tctagtcgca aaagtaccta aattttcatc
     8881 attttgaaag atccttatcc tctcatcttt tttagccaat tctaaggcta tttttacact
     8941 ctcatcttcg cttttatcat caataaccaa aatttcaata tctcttaaag tctgatttat
     9001 acagctttgc aaagctcttg cgataaaatc acaagaatta aaaagcggga ttataataga
     9061 aagttgtggc atattttccc taaattttgt taaaataata aaaagaattt tatcaaattt
     9121 taggaaatct atgaaaattt ttatccatct tcccacttgg ctaggcgatg cggttatggc
     9181 ttcatctgct ttatatggag tttatcatta ttttaaaaat gctgaattta tcctttatgg
     9241 atcttttgta tctacagcgc tttttaagga atttcctaat gctaaaatca ttgtagaaaa
     9301 taaaaaatca cgctacaaac aagccctttc tttacgcaaa aaacttggaa aaatcgatct
     9361 agccctttct tttagatcag ccctttcctc taagatcatt ttacacatcc ttaaggtaaa
     9421 acaaagatat ttttttaaca aatatgattt taaagaagaa catcaggttt taaaatatct
     9481 ttattttata gaaaattcat tagaaattaa agctcattct aaggatttaa aacttccttt
     9541 taaattaaaa tttcaaaatc ctattgtttt aaaaaatggc aaaaaaatcc taggattaaa
     9601 ccctggagcg agttttggaa gtgctaaaag atgggatgcg agctattttg cacaagttgc
     9661 tttaaatttt agcaaaactc atgaaatttt gatttttgga gcaggtaaag cagaacaaga
     9721 actttgcgat gaaatttttc atatactaaa agaaaaaaat gtcaaagtaa aaaatctttg
     9781 caataaaacc actatcaaaa ccctttgtca aaatatcgtt ttttgtgata ttttcatcac
     9841 aaacgatagc ggtcctatgc acatagctgc cgcttataaa acaaaaacca tagctatttt
     9901 tgggcctact aaatttaccc aaacctcacc ttggcaaaat caaaatgcaa aattagtaca
     9961 tctaaattta tcttgcatgc cttgcatgca aaaaacctgt cctttaaaac atcatcggtg
    10021 catgaaagat ttaaaaccgg aattagttat agaaagtgct aaatgccttc atcaaaagct
    10081 ctcatctact atctgacaaa gcgtgtgtat gattaagata tgcatttctt gaattctagc
    10141 cgtatcatca cttggcacga caagattatg gtcgcaaagc tcattcatct ttccacctcc
    10201 tttgccacta agccccaagc aaagcatatt taattcttta gcttttttaa atgcttctag
    10261 gacattagga ctttttccac tggttgaaat gcctattaaa atatcatttt cacttcccaa
    10321 agcttctact tgtcttgaaa aaacaaactc aaatccataa tcattgccta tagcactaag
    10381 tgctgaagtg tctgttgtca aagctatacc cgctaaagct ttgcgttctt ttttatatct
    10441 gccgctaagc tccgctgcaa aatgttgaga atccgcggca ctcccaccat ttccacaaat
    10501 taaaattttt ccaccttttt ttaaacactc acacaaaagc tcgcctactt ttgcgatttg
    10561 cccttttaaa atttcacttg ctttggcaac tttttgatgt tcttgccatt ctttttctac
    10621 taaatttatc attttttatc cttgattttt tctataatct tactcgtact aaaaccctct
    10681 tcaaaatcga tcaattcaac tcttgaaacc aaatttgaac ccaccacaag cttgtcttta
    10741 taatcagctc cttttaccaa aatatcaggc tttaaaaagc ttataagctc taaaggtgta
    10801 tcctcatcaa aaatcactac aaaatccaca aaataaaaag ccgcaagcat acaagctctt
    10861 tgaaattctg aatttatggg acgatcttcg cccttaagcc tttttacact tttatcagag
    10921 tttaagccca cgattaaaat atcgcccaat ctttttgctt tttcaagata ttttatatgt
    10981 ccaaaatgta cgatatcaaa gcaaccattt gtaaaaacga tccttttatc actttgttct
    11041 aaaatcttta aaagctcttc tttggttttg atcttttttt caaagcccac gcgtttaaag
    11101 cttttcatct catcaaaact cacactcacg ctgcctattt tactcactac gatagccgct
    11161 gcttcatttg cgatctcaca agctttaaaa atttccactc cactagctaa acaaaaagcc
    11221 aaaacagcga tcacgctatc acctgctcca gttacatcat aaacttctaa agctttagca
    11281 ggagctatgc gtaaattctc atcaaaaaaa gcaatccctg cttctgaaag tgtgatgata
    11341 gaataacgca aactaaaatc ttcttttagt tttttaatac ctttttctaa attttcgccc
    11401 tctaaattct caaatttcaa aacctctaaa gcttcttttt tattgggtgt taaaagcgtt
    11461 gctccactgt atttaccaaa atcatttcct ttaggatcga ttaaaatagg tatatttagc
    11521 tcatttgctt tttggataaa agccttacac actttaggcg ttaaaactcc ttttgcataa
    11581 tcacttaaaa ccacagcttt aaaattttca attcttttgt taaacaattc tacaagctca
    11641 tcttctagca aaatcgcact cgtatcctct tcatcaagtc ttaaaacttg ctgattatgt
    11701 gccatgatgc gatttttaaa aggggttttg cgtccttttt ggattaaaaa ttctcctttt
    11761 aaattttctt ttaaaaattt cccactctca tcatctccta cgacaccaag cgcaaaaaca
    11821 tctgctccta gactttttaa atttgcataa acatttgccg ctccgcctag tcttttatct
    11881 tcttttaagg tttttgccac taaaacagga gcttcaggac taatgcgcga acaatcacac
    11941 caagtgtaat tatccaccat gaaatcccct atgataagaa tttttggatt ttgatcactt
    12001 aaaaattcaa gcattcactt ccttttcaaa aagtcttttg atttcttcta aataatcttt
    12061 aatcccctct tctaaactaa attttggctt ataaccccaa gtttcatcta attttgcttg
    12121 agtatgaaat tgataagatt ttgcataagg attagggata tactcgcaag ttaaatttgt
    12181 atgaagttct ttttgtaaaa tatctactat atcttgaaag cttcttgcta ctccacttcc
    12241 tacattataa accccgcatt ttgattcaag agcgattaaa tttgcactga taacatcttt
    12301 aatataagta aaatctctaa aaatttgatc acttccttca aataaacgcg gattttttcc
    12361 agctaaaatt tgatgagcaa actgcactac catcgaagcg gttttgtttt tataaaattc
    12421 acctttacca taaacattaa aatatctaag tcctaccaaa tgggctttat cgtagtattt
    12481 tttagctagc ttatccatca taaatttgga aaatgcgtaa ggatttttag gctcttcatc
    12541 cttacctacg gtttgtggac tttttgcatc accataaaca gaagctgagc tagcataaac
    12601 aagctttgcg tgaagtttta tgctgagctc tataaaatct ttaaaagtgt taagattagt
    12661 ctgtaaaacc ttagtttgat caaaaactgt tgtatctgaa atcgctgctt gatgaaaaat
    12721 cacttcgggt ttaaaatctt cgatttttct taaaaccttt tcatcattaa tatcgcccac
    12781 aaaaagctcg ccattaaaat cgagtaaatt tttaaaatgt ccaaaacttt gcaaatttcc
    12841 attttcaaaa gtctcataac tacgcatttt atcgatgatt aaaatttcat gctcatcttg
    12901 taaatttaag gcaagttgtg agcctataaa acctgcgcct cctgtgattg ctattttcat
    12961 ctatcttcct tttttttgaa aaaatctaaa agttcattta aatttttaaa ttgtctaaaa
    13021 aaatcgcctt ctttttcttc ttcatttacc aaacacaaag tgccaatttg tgcgtttttt
    13081 ccagcttgca tatcgctaat attatcccct ataaaaatag aattatccat atctatatca
    13141 aattcttcct tagcttttaa aagcattcct gctttaggtt tgcgacactc acaaccctct
    13201 aaatgaggac aatgataaat tttatcaatt tttacatttt ctttcataaa ttcatcaagc
    13261 ataaaatcac aaagcttaga aaagtcttct tgggtataat accctcttgc aatgcctgat
    13321 tgatttgtag ctacaaaaag caagtatttt tgtgttaaaa aatatctaca aagctcaaaa
    13381 attccatcac aaaattcaaa atcctgaatt ttatagacat attttttatc tatatttata
    13441 atgccatctc tatctaaaaa taacgctttt cttttcatgg gtatattata atataattca
    13501 aattaaagaa aataaacatt ttgatatttt taagaaaaat gttaaagtta aaaatatata
    13561 attattatgt attaaaactt ttcaaggaga atataatgaa aaaattacta gtagtttctg
    13621 ctttagcatg tcttggcgta tcagctttcg ccgcagatgg agctacactt tttaaaaaat
    13681 gtgcagtatg ccacggtgca aaagcagata aagtttatct aaacaaagtt ccagcattaa
    13741 aaagcatctc ttcagctgaa agacttcaat atatgaaaga atactcagaa ggtaaaagaa
    13801 atgcttatgg acaaggcgct atcatgaaaa tcaaccttaa aggtttaact gaagaagatt
    13861 tcaaagctat cgaagcttat atcgaaactt tataatttta aggctttcaa aatttagaaa
    13921 gcctttattt tctctttttt aaagcttcct tttttctttt ttctaattct atagcatcgc
    13981 gcaaagcatc ctcatcatca tttagagtag taaatttata atcatcatca aattgtttag
    14041 tccttatccc ccaaagcaag gtagccagta taataaaaaa acccagtatt gaaaccccta
    14101 tcatcatcat gattacacta ttcatttttt atccttaaag catttaaaat caccattata
    14161 ctactaaaag acatagaaag tgctgcgatt aaaggattaa ttaaacctaa aaatgccaaa
    14221 ggtatggtaa aagcattgta agctaaagaa aggattaaat tttgcttgat aattttataa
    14281 gtatccttag aaagcttaat ggcgtatttt aaagaaagca aatcattttt taaaagcaaa
    14341 atatcactat tttcaatcgc caaatcactc ccctcgcgca aagatattgc tacagcagca
    14401 tattttaaag ccaaggcatc attgactcca tcgcctacaa ataaaacttt tttcttatga
    14461 cttaaatttt caattgcttg cattttatct tgaggcaagc aggaagcata aaaagaagta
    14521 attcctaatt ctttggcaat tttttcaacc gctctttcat tatctccact taaaatcatc
    14581 gtatcaatct tagcttgttt aagataagat ataagctctt tagcaccttc tcttaatacg
    14641 cttgaaaatt caaaataagc aagaatttca ttatcacgcg caaagataaa atgagaattg
    14701 ttaaattctt ttttacattt tatcccatta tcttctaaaa atttcgaact tccgcccaaa
    14761 aataaagtat tatcaagaca agctttaatg ccctttgctt gaatattgct caaaccctta
    14821 aaatccaaat ttaaaagctt tgcattttta tcttgtaaaa actgcgctac acttttagca
    14881 ataggatgat ttgaaagcga tacaaagcta taaaactcat ttaaatttag cctttcatct
    14941 aaaaaaactt cagctatttt taattgggtt tgagtaagaa ctcctgtttt atcaaatact
    15001 gctatatcgc attttgaaag tttttcaacc acgcttgaat ccttaaataa aatcgctctt
    15061 tttaaagcct gacccaaagc gataagattg cttactggag tagctaaagc tagagcacaa
    15121 ggacaagcaa tgattaaaac agaaatcgca tgaacaagtg aaatttcgac actttcttga
    15181 tgataaaaca gccaaaagaa aaaacaaagc aaggcaagag ttaaaatggt acgagaaaaa
    15241 taagcagaaa tttgagaaac caagctttca agtctagctt ttttggtgct agcaaattcc
    15301 aaaagcctta tgatttgatt taatttagaa tccttataaa gcttatttgc ttcatattct
    15361 atacttccat ctagcacaat acaagctgaa tttacaacac tacccacgcc cacaaagcaa
    15421 ggctcatttt cgccacttaa agaagaagta tcgatacttg cttcaccctt tttgcaaatt
    15481 ccatctatga gaattttatc cccactttta agtaaaatcc tatctccgat attgaccttt
    15541 tgaacatctt taggctcaaa atctttgcca ttgaaaacca aaacttcatt ttgtaaaaaa
    15601 tcatttaggc catctactgt atccaaagcg cgttttttgc taaacatttc aagatattta
    15661 cctataaaaa caaagcaaat aatcatagcc acagaatcaa aatacacctc gcctactcta
    15721 aaaaacatcg cccataaaga gtatccataa gccaaacttg ctccgcttat aaccaagcta
    15781 tccatattta aactacgcat ttttagagct ttaaaagcac ttttataaaa atttgaacct
    15841 gtataaaaaa gcacaggaga gcaaaggata aattcagcaa aatttaaaat atctttaata
    15901 tccctatcca taccgctaaa aaatcccgca tattttgcta ctgctatcca catgatattc
    15961 atcacacaag caatggcaac tatgagctta gagtaaaatt ctcgcttgat taaatctgct
    16021 tttttggaat ttttagatgg atcataagca ctggctttat atcctatact ttcgataaga
    16081 tttaaaattt gcgccaaaga aacactttgt tcatcaaaaa caatgcgtgc tttatgcgaa
    16141 agatgattga tatctaactc caaaattcct tcttgtttgg ttaaaactct ctcattaagc
    16201 caaacacaag cggagcattc tatgccgtgt atcatgagat aaatttcgct aaaaccctct
    16261 ttggttttgg tgataaactc atcataattt ttgttagaaa attccaagct aactggcttt
    16321 agtgcgttat tgcccaatct ttcgtaaaat tcatccaagc cactttcatg taaaatttcc
    16381 caaacactca aacagcccct acagcaaaaa aatttaccct tagcttctat catttgagat
    16441 ttttgataat ctagtctaca atgttcacat ttcataatca ttctttaaaa aaatattttt
    16501 tataattata gacaaatttg acaaaaagta tattttttta ctaaaatcac ggttttaatt
    16561 tgctacaaaa ttactgcttt cttgcgagga cttatggaaa aagaaaaaaa acaacatcaa
    16621 agaacccaca ttccagtgga gggttataaa attgaagact taaaactact tgacttagaa
    16681 aacctagtta aaatagctaa tgaatgcgag atagaaaatc ctagagaatt tcgccgtcaa
    16741 gaactcattt ttgaaatttt aaaagcccaa accaaaaagg gtggttttat cctttttaca
    16801 ggaattttag aaatttcttc agaaggttat ggctttttaa ggggtatgga ttcaaattta
    16861 agcgatagtg tcaatgatgc ttatgtttca aactcacaaa ttcgtaaatt tgctctacgc
    16921 gtgggcgata tagtaactgg acaagttaga gagcctaagg atcaggaaaa atactatgct
    16981 cttttgaaaa tagaagcgat taattatttg cctttgcaag aagctaaaga aagaccttta
    17041 tttgataact taactcctat ttttccaaca gaaaaaatca aactcgaata cgatgctatg
    17101 aaattaactg gaagaatttt agatcttttt acccctatag gtaaaggaca acgcggactc
    17161 atcgtagcac cgccaagaac gggtaaaaca gaacttatga aagagctagc aagtgcgatt
    17221 gctaaaaatc atcctgaaat gcatttaatc gttcttttag tcgatgaaag acctgaagag
    17281 gttactgata tgcaaagatg tgtaaagggt gaagtgttta gctctacttt tgatttgcct
    17341 gcttataatc atgttcgcgt ggcagaacta gttatcgaaa aagcaaaaag aatggtagaa
    17401 acaggcaaag atgttatcat tttgctagat agtatcacaa ggcttgctag agcttataac
    17461 actgcaactc caagcagtgg aaaggtacta agtggtgggg tagatgctaa tgcacttcat
    17521 aaacctaaac gcttttttgg tgcagcaaga aatatagaaa atggcggatc tttgaccata
    17581 gtagcaactg cacttatcga cacaggttca agaatggatg atgtgatctt tgaagaattt
    17641 aaaggaacgg gtaatagcga aatagtctta gatagaaata tttcagatag aagaatttat
    17701 cctgcgatta atatcatcaa atctggaact cgaaaagaag aacttttaca aggagtggca
    17761 gaactacaaa aaatttgggc tattcgttca gcgatttctc aaatggatga tatcgaagcg
    17821 cttaaatttc tttattcaaa aatgttaaaa actaaagaca atgtagaact tttatctatt
    17881 atgaatgagt agagatgctt caagccttag cgattaaata cagacctaaa acctttgatg
    17941 aactcatagg acaaaaaaca gtcagcacaa gcttaaaata tgcattaaat cacaatcgcc
    18001 tagctcatgc ttatctcttt tcaggcttac gcggaagcgg taaaacttca agtgctagaa
    18061 ttttttctag agccctagtt tgtgataatg gcccaagcga tactccttgt ggaacttgca
    18121 aacaatgcct tgccgcactc gaaggcaaac atatagacat catagaaatg gacgctgcta
    18181 gcaatcgtgg gctagaagac atacaagctc ttattgagca aactaaatat accccttcta
    18241 tggcaagatt taaaatcttt atcatcgatg aagtacatat gctaacacct caagcggcta
    18301 atgcgctttt aaaaacactg gaagaacctc caagctatgt gaaatttatc ctagcaacca
    18361 ccgatccttt aaaattgccc gctaccgtgc tttcaaggac gcaacatttt cgtttcaagc
    18421 aaattccgca aaatgaaatt ttaaatcatt taaaagaaat tttaaacaaa gaaaatgtca
    18481 aatttgaaga agaagccttg aaatttgtcg caagaagtgg aaatggctct ttaagggata
    18541 ctcttacctt gcttgatcaa gctattatct tttgccaaaa cgatataagt acgagcaaga
    18601 ttactgacat gttaggcttt ttagatcctg ctaaaatcaa ggaattttac catgccattt
    18661 taaccaaaaa caaggataga gtttttgatt ttttagaaga gcttaaagac tatgaagcct
    18721 caagcgtgat cgatgaaatg cttttttatt taaaagaaag tttttttgca aaaagtagcg
    18781 aattttcaac tctcatttat gaaagatttt tccgtatctt agcaagagca aaaaatctca
    18841 tctgtgatga tgatggcttt acgctttgtg tgatggcttt tatgatgatg gaagcaagtc
    18901 atttaaaaga aatcgataca caaattaatg aaattcaaaa aaaccttaca aatacaaatt
    18961 ctaatctaga aaaacaagag gtgaaaaccc ctatagtatt agagattcaa aaatcttcaa
    19021 cgattaaaaa tgcatacgaa attttacttg aaaaaatcta cgatagagat tatgaacttg
    19081 gagaatgctt taaacaaagc actcaattta taagttatga aaatgaaatt ttaactatta
    19141 gttcaaatgc gcaaggaagt aaccgcgata agcttaataa gggctttaaa ctcattcaag
    19201 aactttttag aaatcatttt ggctctaatg ctaaaattgt cgtgcaaaaa gcaatcatta
    19261 tagatgagag caaattacaa tccctaaccc aagaactgcc tcaacaaaat aatgaagcac
    19321 aagctcctaa aaaaatagat cttcactctt cttttaatga gctaaaacaa ggagcaaaga
    19381 aatttgatcc tcaagaggat acaaaagaag ctttaagaga atattttggc gaacccaaaa
    19441 tagaaaacta agtctctaaa gcttagactt ttctaagtct tagagaatta agcactacac
    19501 aaagtgagct aaaacacatt gcaagtgctg ctaaatgagg acttaaagtg atgaaaggca
    19561 caaagcctgc ggctatggga atacaaagaa tattataaaa aaacgcccaa aaaagattga
    19621 gcttaataat attttttgtc tttttagcaa gcttaaaaca ccaagaaata agccttaaat
    19681 catctttcat aagtataaaa tctccagcat ttttagctaa atcacttcct tctttaaaac
    19741 tcatactcac acttgctaaa tttaaagcag ctgcatcatt aatcccatct cctacaaaaa
    19801 gtgaattttg cttatgctct ttaatgattt gcaatttttc ttcaggcaac aatcctgcct
    19861 taaaatcagc aatacccaat aaatttgcga cactttgtac gcttttttca ttatctccac
    19921 ttaaaataat gctttgaatt ttttgctttt taaaatcctc tataagctct ttagcccctt
    19981 cttttaaggt attttttaga gtaagcaccc ctaagcactc accattttta gcaaaataca
    20041 cacaaattaa agcttcttct tttaaactct gtaaaaattc atctgccttt tctaaatttt
    20101 ttactccact ctcttgcata aattttaaat ttcctagcaa gtattcttca ttttcttcta
    20161 tgtattttac acccttgcct ataaaaattt cactacttcc ttttagaatt tgagctttta
    20221 tcttagaagc ttcaaagata gccttagcga taggatgaga acttgaactt tcgattaagg
    20281 ctagcatttg aaaatcttta gcatttaaat tgtgcctaaa aagttctaaa ttattttgcg
    20341 ttaaggtgcc tgttttatca aaaaaagctg tcttgatttt atttaaattt tctaaagcag
    20401 cagggttttt gattaggata aaatttttca tcgccgcacc ttgagcggtg attaaagcga
    20461 taggagttgc aagccctaag gcgcaagggc aagagattaa aaggactgca caagcgtgta
    20521 aaaaagcttc acttacgcct actttaaagc tccaaaatac aaaaactgcc aaggcaaaag
    20581 cgattattgt gatgacaaaa tatctagaaa ttctatcgac tgaattttcc aaaggagttt
    20641 tgacatttcc tgctttaaag acaagatctt tgatctgttc taaagtgcta tccatagcct
    20701 ttttacttgc ttttatatgt aaatttccat ttaaaagtat agagcctgcc tttatctcat
    20761 catcaactct tacactgcta ggcaaaaatt ctccgcttaa aaaactcgta tcaatctcgg
    20821 ccttaccttg gatcactacc ccatcaactg ctacgctttc accctctctt actactataa
    20881 tatctccatt tttaacaaaa gcacttaaaa tttcattaag ctcccctgct tcgtttaaaa
    20941 ttttagcctt ttttatatca atttcattga gtcttttttg ataattcaaa gccttaaatt
    21001 tagcatttgt ctctaaaaat ttacccaaaa gcacaaaact tataatcatg gccgcaccac
    21061 taaaataaag gtgcttttca tcttcaaaaa gatttaaata tatacaaaaa gagtaagcaa
    21121 aggcactgat acagcctaaa gcgattaagg tattcatatc taaattccaa ttttttaaac
    21181 ccttaatcgc atgagaaaaa aaagtcctac cgcaataaaa aatcacaaaa aagcttagaa
    21241 gcatttgcat attttgactt aaaaaacttg tgtcaaacat ttcaaaatac ataatcaaag
    21301 cacttaaaac tatgcttaaa agcaaatttt tacgcaagga gatgagttct tttttacggt
    21361 attcttccaa attttgctca ttttctaaaa tctcaaagcc aagactttga attttttcaa
    21421 tcacatcttg actccttgcc tcatcttcga gtaaaaatac cccactagaa ttcacataag
    21481 aaacacttgc atcactcact ccttgtattt tcttacaagc acgctctatg gcattagagc
    21541 aatttacgca agtcattttg cctattttta cacgaaattc ttgcattatt caatcttttc
    21601 taaaacttca aaaccaagtt cgccaagttc ttttttaaat tcttcttctc ttgagctatc
    21661 taaattcaaa cttagcgtgc gtggattcgc atcaagatct attttgatct ctccaaaaat
    21721 atcttctaaa gaatttttaa tcaaatttgc acaattttga caattgatat ttgcgacttt
    21781 aaatttcatt tttactcctt aaaggttgaa tggtaatatg ccctatttca aatcggtgta
    21841 acaaatcatg cgacaaatca taagataatt gttcaaattc ttttaaatca tcgatattaa
    21901 ctcgtaaatg catagaagct actaacattt tattggtaat ttgtgtgata tgcaaatcaa
    21961 tcacctcttc tactttagaa tttaaaagca aagcttgttt tacctcttct atatccacag
    22021 gagaggtttc aagtaaaata tttacacttt gcttaagaag tgttatagcc catcttaaaa
    22081 gtaaaagcga taaaataata gctaaaatcg tatctatata aactataccg ctaaaatata
    22141 cagcaatacc acctataatc actaccaaag agcccagcaa atcactcatc atatgcaaaa
    22201 aggctgattt catattgaca ttttctaaat ttgcgcctct aaacatcata aaagcattta
    22261 tagcattgac taaaaaacct aaaacagcta ctataatcat agttttagca tcgatactgc
    22321 ttggatttat aagcttttct atagcttcat agatgataaa aatcgctgat aaaatgatag
    22381 ttaaagcatt gataaatgcg accaaaattt ctaagcgaaa ataaccaaaa gtcttttgat
    22441 gatcctgcca tttttctata gcgataatag ctaaaaaact aagtgttaga gcaaaaacat
    22501 ctgaaaacat atgcaaagta tcacttaaaa gcgcaagaga attagaaagt aaagagtata
    22561 taaattgaac cagcatcatt gaaaaagtca tcaaaagaga aattttcaat atttttttat
    22621 ccacactcct tgcatcagca tgatgatgtt catgagagtg atcttcgtgg ttatgtttag
    22681 atttattcgc taagggttcg tgtagtaaaa attcatacat tttatatcct ttttgcttga
    22741 tattttaaga tattaaacta aaaaggatat aaagatttat atttttcata aaaattaaaa
    22801 atcaaaaagt tcgcctagcc agctttctct ttttttcttt ttgtaataat gatcgtggct
    22861 ttggtgacta taagaatgat cattatatct aggctcttgt cttggagctt ggttaaaact
    22921 tgccgtatta ggagtgctgc gttctatgat tttatcaagt tctccacgat caagccaaac
    22981 accacgacac tttggacaat aatcaatctc aactccgctt ctatcgctca ttaccaaatc
    23041 aacattacaa acaggacaca acatgtattt ttcctttttt ataaaatttt caaaattata
    23101 ataagaaaga ttaaacaaaa atcaatgctt tttagcatgc cttgtcatca taaaactttg
    23161 ctcaaagaat ataagcaagg taacgcttac ccctatagcc aaagccaaag ttaccgaaag
    23221 tgtggtaaaa aaataatcaa aaaactgcac caaaaattca gacttagcct ttaaatcatc
    23281 actgcgtata aaagagataa gatataaaat agccttataa gcataaatac caggtatcat
    23341 aggaataagc gcaggaaaag caataacctc agcaggggtt ttaataatct tagccaaagc
    23401 aatacccaaa caacccacgc aaaaagaagc tacaaaagtt gcaattgcca aagtttcaaa
    23461 atgaaaatat tctatcaaag taaagcgaag tccgtgagca atggccgcta agagtgcaga
    23521 taaaataaga gtttttaaag gaggattaca agcatacgcg aaaccaaacc cagccatagc
    23581 agcaaaaaac atatctttta agataaattc aatcattgta aaatcccaaa ttttgaaata
    23641 ctaagagtca tataaattcc aagagcaata cagcaaatta aaatagctac gctgataata
    23701 cgacttaaac ccattaaaat atgatctttt aatatatcga ttatagaatt gataaaaaat
    23761 acccccggta taagatataa gatactagaa ccaagtgctg catcagaagt atttgtatag
    23821 cccatatcta aacccaaaaa tacaaaccaa gaagaaacaa aagagcaaag aatgtattga
    23881 attcttaaat ctatttttat cttagtaagg gcaaatctta aaagcagtcc taaaaaagtc
    23941 gcaaaaaata ccaaaacccc tgcgccaaaa tccccgccaa aaagtctaca aaaacctgaa
    24001 ttagctatag aaacaaataa aagatttaat acataagaat gttttttttg aatacttata
    24061 gcattaaagg ctgattttgc tttttcaagt tcgtatttgt gatcgtatat ggcccaactt
    24121 aaagcactta attcaaaaat aagtttaaaa ttaatatgag catgatgatt aggtatcaca
    24181 taggttcttt gtatggaatt atcttcaata tctacaatat ttaaagtaat atggtgaaaa
    24241 aagaaattaa tattgatctc atatccataa acttgagcta tcctgccaac gcatttagca
    24301 actctagctg tgtaggttcc tgcgcttaaa agtgttttgg tatagtcgat tagaaaattt
    24361 gttaaacttt gaatatcagg cttttgcata tttataattt ctttaaaatc aaatttatat
    24421 aattataaca aaatttcaaa gcaaaggaaa taaaatgtca aaaatcggta ttgtgggttt
    24481 gggttttgtg ggtgcagcaa gtgcttataa tattgttgtg caaaatattt gctccgaact
    24541 ttatttatat gatatcaagc aagacttagc cttagcacac gcgagagatt tagaagatat
    24601 gtctgcgatt cattcttctt atacgagaat aattcatgct acaaatttag aacaactagc
    24661 aagttgtgat attatcatcc tagctttcag aaaagaaaat ttaaaagaat tatccagtcg
    24721 tttagttgag cttcaaaaca atatcaccga gcttaaggat attgttttga gtttaaaaca
    24781 tgcaaatttt aagggtaaat atatcgttgc tacaaatcca aatgatacga ttacttatta
    24841 tactcaaatt ctaagctctt tacctaaaaa ccatgttttt ggaagtggaa ccaatcttga
    24901 tagctctaga cttaaaaaaa ttctagccaa agatttagat cttaatccta aagatatcac
    24961 cgcttatatg ataggagagc atggggattc gcaatttgcc gccctttcta cggctagtgt
    25021 tttagggcaa aatttactaa cattttgcga taagatgggt aaaaaattag atatagaaaa
    25081 tatcgaaaaa gcagttgttg atgaggggta ttttatctat aaacgcaaag gaagaaccga
    25141 atttggcata ggaacttctt gtgcaaattt agctaaagct gttttagaag atagaaaaag
    25201 cttgcatcct gtaagtgtgg tttttgatga tttagcattt tcattgcctg ctatcatagg
    25261 aaaaaatggg gtagaaaaaa tctttggact agattttaac gaaagagaaa aaatcaagct
    25321 agaaaattca aaactgcaaa ttaaaaatgc tatacaaagt gtgagcgata aaatttaagc
    25381 ctttttagca aaaggctttt ttatttttat ataaattaaa cttgccaaaa ctataaaaat
    25441 aattataaca ataagaattt gagtcagata agctttaatc aattcttcat tttctcctat
    25501 ataataaccc aaaaatgcga gtatacttac ccaaatagca ctacctagtg cagtaaaaag
    25561 cacaaaatta acaagtttca ttttaaccaa acccgcaggc atggaaatat actgacgaat
    25621 tcctggcaaa agcctacaag taaaagtgga aaattctccg tgtttattaa aaaattcttc
    25681 aaatttggca aatttagctt cattgatacc aaaatattta ccccatctaa gtacaaattt
    25741 tttaccccaa aaaaagcaaa tataataatt aatcaaagct cctaaaacag agcctaaaac
    25801 tccacttaat atacaaaaaa ctatatcaag ctcgccctta tgcgctaaat atcctgctgg
    25861 aatcatcaca acttcacttg gaaaaggtat aaaacaactt tctaaagtca ttaaaataat
    25921 aatgcctaaa tatccccaat caccagcagt ttcgataata aaatgaatga tttcttgcat
    25981 attagcctta tagaagaaaa atttccaaaa ttgtaactta aaaaaataaa caaattaaag
    26041 caagtattta aaatcatact ttctaactaa gatttataca gaagctatct tagctagtct
    26101 agtaaaagac cagctttagt aggcaagata aaaattaatg taaattagat tttatcacag
    26161 attttaatat cgatgatttt atcaccttga cgaatagaat ctagcacttc caaactttct
    26221 tcatcttttg gatcaatttg cccaaaaaca gtatgaactc catctaaatg agcttgaggg
    26281 ctgtggcaaa taaaaaattg agagccaccc gtatcgcgtc ctgcgtgtgc catagataag
    26341 gttccacgct catgtttatg ttcttgatca tcacattcgc aaatgatttc atatccaggc
    26401 ccacctatac cattgccgtg tggacaaccc ccttgtatga caaaatttgg gatcacacga
    26461 tggaaattta aatctttata aaatccttca ttagctaaag tagcaaaatt acaaaccgtt
    26521 tgtggagcct catcgccaaa aagttttagt ttcattgtac ctttttcagt ttctataaga
    26581 gcaaatttat attcgtttac tttgcttgtg tcgattgttt ttatcattat ttctccttaa
    26641 tctatatttg tataaacagc ttgaacatca tcatcatctt ctaacttatc taaaagtttt
    26701 tctatatcgc taagctgttc ttcgctaaag cttacaggat tgtttggtat atactcaagt
    26761 cctgcttttt taagaactaa acccttagct tctatagcag aacttagctc accaaaggca
    26821 gtataatcac cgctaattac taactcttct tcattttgtt ctaattcttc aagccctgca
    26881 tcaatcaaat caagttctaa ttcttctaaa tctcctgcaa atttttcaag atgaaaaacc
    26941 gcttttctag taaacataaa gcctaaagat ccattttgta aaacttctcc accatttttg
    27001 ctaaaaatag cttttacatt agccacggtg cgtgtagggt tatcgctcat acattcaact
    27061 ataaccaaag ctccatgtgc agcttttcct tcataatgaa tgtttttaat atctgcgcta
    27121 tcctttccac tcgcacgctt aatagccgca tctatattat cttttggcat attatttgct
    27181 tttgctgtag ctatagcact tcttaatttt ggattcatat caggatcagt gccaccttct
    27241 ttagcagcta cttgtatggc tttagcaagc ttaggaaaaa gcttactcat tttatcccat
    27301 ctagcctctt tagaagctct tcggtattca aacgctcgtc ccataaattc tcactttctt
    27361 taaagatttt taaacttaaa agtataaact aaaaaggcta attaaagctt taaatggtat
    27421 gattttacca tttatttttg gggagaaact ttttgaatat cgcaaaaaaa gaacttttta
    27481 ttgcttggtt tttcttgatt gctgctattg tatttgaagt tttaggtact agttttttaa
    27541 aaatggaaaa tcaaatttta ggctatatat ttatggcttt atttatagct ttttcttatt
    27601 tttttatggg caaggcgatt aaaaaaattc aagtaggcat agcctatgct gtatgggaac
    27661 ttttagggat tattcttata cttttagttt cttttatagt ttttaaagag agtttaacct
    27721 taactcaatt tctaggcatt gttctttcta tcgttggaat tatcatgatt aatataggcg
    27781 aggttaaaga ataatgtata tttttattat tgttctatcg gcattgttag atatcgtagc
    27841 aaatttattg ctaaaaaaat cagatggttt taaacataaa atttggggct tagctgcgat
    27901 tgtcaatgct atacttgctt tttttctact ttctttttct ttaaaatatg ttcctttaag
    27961 catagcttac tcaacttggg gtgctatagg catcatagga acttgtcttg gtggatggat
    28021 tttatataaa gaaaaattaa acaaaatagg aattttaggt atcattatcg tgataatagc
    28081 agtattttta ctaaactatt aaaacagcaa aatgctgttt taatgttcca ttttgttttt
    28141 tgcttcaata cccattaaag aaaatgcggt tttaatacta agagcaacca aagaaaataa
    28201 tttaagcaaa tcattttcat ttgcagagcc tacaacttta ttttcattgt agaatttatg
    28261 aaaatttgca gctaaatttt taagataatc aggaattttt tgcaaagctc tagcctcaaa
    28321 agcatcgttt aaaatagcct ttaaattcaa agcttcaaaa agcaaattta cgccatcttg
    28381 atttaaactt tgcaaatcag ctttcattac atcatcgatt tttttaccag ctttagcaaa
    28441 cacttgatga attctagcgt gtgcatagtt gatatagtat acaggattag agctatcttc
    28501 tttttgcaaa tcactaatat caaattccaa atgagtatcg cattttttac tcaaaaagat
    28561 ataacgcaaa gcatcacttc ctatctcatc aactacatcg ctcatcaaga taaaatttcc
    28621 tgctcttttg ctcattttat aaggctctcc atctttaagc aaggaaacca tttgtgctaa
    28681 aataatctca agattattag agtcaaatcc caaaaactcc atcgcagctt tcattctagg
    28741 gatataacca tgatgatctg ctccccaaat attaatacac tttccataac cacgactcat
    28801 tttatcttta tgataaacaa tatctgctgc caaataagtc ccgcgtccat cttcacggat
    28861 aattacccta tctttttcat cgcctttttg cgaagaagca agccaaattt taccttcttg
    28921 ctcgtaaatt cctttatgct cttttaaaga ttctaaagtt gcatttaaag catcataata
    28981 cgatctttcg cttacatagc tgtcaatttt aatctttgct tgttctaaat tttgtttaat
    29041 caaaacaagc attttatctt ttgcccaatc agccaaacta gggatatttt cttcgctaaa
    29101 aaattcttta ccaaattttt caaaagcttc ttttgccaaa tccgctatat actcgccttt
    29161 gtaatattgc tctggatatt caacattttc atgaagtgta ttttctttca cacttagtaa
    29221 aatagaaagc cctagtaaat aaatttgatt acccgcatca ttaacatagt attctgtatc
    29281 gaatttataa cccaaatgtc ttgcaagtct tgttaaggtg tctccaaaaa cagcacctct
    29341 tgcatgtcct atgtgtaaag gcccagtagg atttgcactc acatattcaa gcaaaaaact
    29401 ttcttgtttt ttttctcctt tagcaaaatc atttggattt gttaaagcct gatttgcaag
    29461 ttcatttaaa aaagttttgg aaattctaaa atttaaatac ccatttacag cttcaactga
    29521 ttcaaaacaa tcatgatttt gaaatttgct cgctaagtca ctagcgatca acataggaga
    29581 tttttttaac tccttagcca gtgaaaaagc caaaggggta gcaaaatgtg ctaaattttt
    29641 atcctttgga ttttcaagtg caaaatcaca ctctaaaatc tttttaattt cattaaaaat
    29701 aatatttttc aaaagactaa accttaagct ttttttgttt cgtctatact tgcatcagta
    29761 tttgtattat tagttgtgtt tttattttct tctatttttt gagtattttt tgctacttca
    29821 tcatcattat tcatttcatc tttaaaagtt ttaatacctt tacctaaacc ctttgcaagt
    29881 tctggaattt tttttgctcc aaaaagcaat acaacaatca ataaaataat caaccaatga
    29941 cttggacttg accaaccacc cattttattc tccttcattc caaatatttt gaatttgctc
    30001 tagattttgc cctttagtct taaacttatg ggcaattaaa attgctctta atgcttcgta
    30061 actttcctct agcttatcgt taatgataaa ataatcatac tcattaagct ctttcatttc
    30121 atcacttgca ttttgcaatc tcttctctag ttgcaatatt gtatcagtat ttcgcttaat
    30181 aagtcttttt tttaattcat ctttattttt tgtagtgata aaaacagaaa tgattttttc
    30241 agccattttc tttttgacta tcttaaaacc ttgtacatct atatcaaaaa caactatttt
    30301 tccatcattt aaagcatttt gtatatgctc aagcgaagtg ccgtaaaaat tttcatgcac
    30361 tttagcccac tctaaaaatt gctctttatc tataccttgc tgaaattcat catgcgtgat
    30421 aaaataataa tccactccat gttgctcacc ttctcttggt aagcgtgttg tcgaagaaat
    30481 agaaaaataa agctcttctt gaaattcatc aaaaagcttt tttaaaagag tggattttcc
    30541 agctccactt ggccctgaaa ccaacaatat aaaagcactc aatttttatc ctcattaaaa
    30601 ctaatgctaa tatttatatt catattcata cccttaagtg ctgcttttaa ggtatcatct
    30661 ttaatgcttg aagtgatagc ccctgctata ctttggctta attcattaac aatttcttca
    30721 cctgcttcac ttgctagttg atcttctttg atttttaatt tctcgctttt gttatcctct
    30781 aaagtagata tttcttcgcc taaagcttct tgtatatcgc tttcttttaa actatcaaaa
    30841 tcattgattt gtaattttgg aacaacgatt tcctcatcat tatttggcaa atctttatcg
    30901 tctaaaatag gttcttcttt aaaatcctct aaaaccttaa tattatcatc gctatcaata
    30961 tcgtattcaa gctcatcaag ttgtgctaac tcttctttga tttgatcttg agtgcttaag
    31021 ctactcattt cttcaaaatc atcatgttca tttaaatttt cttgatcttc tacaacaggc
    31081 aagaaatcct ctacagcttc atcctcttct tttctttgac ctaaaaattc agcatcttct
    31141 ggaatatcat caaaatcgat ttttctttct tgctcttcaa cgataggaaa atcatctgta
    31201 ataaaatctt gcaactgagt tttactaggc tcctctgcat cttctagtac ttccggttga
    31261 gcttcttctg catctaaatt attatttaca attgcctctt gagcttcaga gttttcatta
    31321 tcttgcacta agtcaccatt taaattatca acttgatctt caagttcttg agtatcttct
    31381 attttatctt gttcatcttg gtttgcatct tgttcttgtg tatcttgctc ttgaatttca
    31441 aattcttctt cattttcttc gctagttttg tcatttaaaa tatcatcttg aaatgctact
    31501 tccaaagctt gctcatcttc atttttttcc tctatatgat tagctgttgt ttgttctgac
    31561 gcatcattct cttcttgatc ttcatcaaga cttaaatcat ctaaatttaa ttctttatcg
    31621 gtattttcac tagcaatttc tttctggttt gtttcttctt ccatgtcata taaagctaaa
    31681 gattctaaat tttcttccat agaaagctca ttttcttgcg tatcttcagt attttcatca
    31741 ggcaagtcat ctaaatttaa accatctaaa tctaaactga tattagcgta aggattttca
    31801 gcttcttcga ttggcaaaat aatgtcatct gcgattttaa gattttcttg attgagtaaa
    31861 tttaaaaagt ctgtaggtaa aaatggttta tgcaaaatta aggcatcaat atccgcactt
    31921 tgattacgcg gcgctaaaaa aattaattta tcgcattttt ctttaagaat tttcaaagga
    31981 gcaggtgtat cactgtcgac tataatcaca tcataatgac ctaaattttc atcataggca
    32041 ttaatttcct caaaatcata agacattttt tttgcactca agcttataag tcttgataca
    32101 acagggtttt cattcaaaag taaaattttc atcactttaa tccttaaaaa taattgctat
    32161 tctataacat tttcatttat cctttgctta ggcgaaaaac agagtttgca tatgagtaaa
    32221 aacctccaaa atcaaatctt taaaatattg catcatcaca agcaaaatag ctattagaac
    32281 tacaaatcct aaagctatct tgataggata accaattact aaaagattga attgtggcat
    32341 agttttcatt aaaagcccaa aaatagtatc tgccaaaaga gaaattccaa gtattggaaa
    32401 actcatcgta aaacctataa tgaaaatatt caacatcccc atatttagat aatgcattaa
    32461 attttcatga ggataaaaac cgccaagatt tatataaccc aaagaatgac ttagaaataa
    32521 aagcattaaa tgatgaccat caaaagcaag aaaaaataat aaagcaatca aatgcaaaat
    32581 ttgagaagta ataggcatat ttgttccaga acttggatct aaaacgcttg ccatagtaaa
    32641 tcccatagta aaagctatct gctcgcccgc catcataaca atagcaaaaa caatctgcag
    32701 cataagccct gctatcattc caaaaacaat ttcacttaaa agctgtataa taaaaaaact
    32761 atctaaatgc aaaatttcaa gttttgctaa aggaaataaa tacattgtta aaaataatgc
    32821 aaaagtagtt ttgataatca tagggataga attatgagaa aaaaaaggga aaaatactat
    32881 aagcccactc attctagcaa aaagcaacat aaaggtagct acatttttat ctcctaaata
    32941 attaacaaat tccattggta tttaaaatat aagttttatc acaaaattga gcaagcttag
    33001 aatcatgagt aacaaaaaac aaagcagcat cattttcttt agcataagaa accaaaagct
    33061 ctatgacatt tttagcatta tcaaaatcta aatttcctgt agcctcatcg gcaaaaataa
    33121 tttttggttt tttacaaagc actctagcta tactcacgcg ttgttgctga cctccgctta
    33181 atttacctat tttttgtttt aaaagctcgt gaatgcctag tttttttaag attttttcat
    33241 ctaaatcttg gtttgataaa acactagcaa gttctatatt ttctaaagct gaaaaacctt
    33301 taaaaagata atgggtttga aaaatgatgc ccaagtcata acgacgaatt ttcagtcttt
    33361 cattttcact tatcttgtaa agattttgac ccttaaaaaa aacttcgccc ttatttggct
    33421 ttaataaaga agaaattata tgcaaaagag tagattttcc gcaaccacta ctgccttgta
    33481 tagtaatgca atctttttga tttaaagaaa aatttaaatt ttcaaagagc ggataatcaa
    33541 agctgtgacc taaattttcc actcttaata attccatttt gatactttaa agctgtgcag
    33601 caacttcagc agcaaaatct tcggttttct tttctaaacc ttctcctact tcaaaacgaa
    33661 taaattcaac gattttaatt tttccaccta attctttttc tttttcagca attacttgtt
    33721 caatggtttt tttatcatcc attacataaa attgacccat taaagtaagt ttgctgtcaa
    33781 gttgagaatt atccgctata aagctattca ttttaccagg aataatattg tcccaaattt
    33841 tctcaggttt gccttgagct ttgagctctt cttttatatt ttcttctgct tcttttaaaa
    33901 tcgcatcgct aagttgtttg cggcttgcaa atttaggaat tttatgctct ggtttgtttg
    33961 gatctttaag tctgcgtctt tcttcatttt ctttttcaag ctctgcaact aaagctttgt
    34021 attcattttc tacaaattct atatccaaat cttcatagct taaatagctt ggcttcatag
    34081 cagctatatg catacaaagt tgttttaaga aatctcttga tttatttgct acctcagcat
    34141 tatcacaagc tgcagcgatg ataacaccca cacgaccatt agtatggata tatccattta
    34201 ccacaccatt tgcacttgct tttaagctag caaatcttct tacaaccaaa ttttcaccga
    34261 tagttgcaat ttgacttttt aaatattctt caaattttac gccgttgatt gtactagagt
    34321 gaagctcttc aacactttgc aagctattgt tttgaatgtg tgctgttgta tcttttgtta
    34381 aagcaataaa ttgatcattt ttagccacaa aatctgtttc tgagttaatc tcacttactg
    34441 ttgcgcttgt aaaatcatca cttaccttaa cacttaccaa gccttctgcg gcaagtctat
    34501 cagctttttt agcagcttta cctaagcctt tttctcttaa aagttgaact gctttatcaa
    34561 agtctccatt tgtttcactc aaagcatttt tacaatccat catccccgcg cctgtacttt
    34621 cgcggagttc ttttaccatt gcagcagtaa tttcagccat tattcttgct ccccattaaa
    34681 atcttcttca ctcattgctt catctaaaac ttcttttttt tcttcatctg tgatttcttt
    34741 ttcttcactt ggtaaagctt caccatcttg ttctcttaac gcttttcctt cattgatagc
    34801 ttcagccatt tcttggcaga aaagttgcac tgagcggatt gcatcatcat ttcctggaat
    34861 aggataagtt acaagatcag gatcgcagtt tgtatctaac ggagctacta cagggattct
    34921 tagtctattt gcttcttgaa ctgcaatttt ttcttttact gtatctataa caaaaatcat
    34981 atctggttgt gttttcatat aacgaattcc accaagataa gccaataatt tttctttttt
    35041 tcttgtaagc attaaagctt cttttttggt taaaagttta atacttccat cttcttccat
    35101 tttttcaata acttctaatt ttctaattga ttggcgaata gttccaaaat ttgtcatcat
    35161 accgcccaac catctgtgat ttacataagg cataccgcat ttttcagcat attctttaat
    35221 cgctccaccc gcttgttttt ttgtaccaac aaaaagtata gtttttcctt cagcagcagc
    35281 atcgcgaacg atattgtagg tatatctaaa atatctcaaa gttttttgta agtctattac
    35341 ataaatacct tttctctcac caaaaataaa ttttttcatt tttggattcc agcgtcttgt
    35401 ttggtgtcca aagtgtacac cacattccaa taaatctctc atacttacca tgagtttctc
    35461 cttataattt agctttattc ctccgcatcc cttatctata aaacaagcta aaaggacttg
    35521 atgcgtgtga aatgaagcta aaattatatc aaatttaagt ttagtattta cttataaata
    35581 tactctttag taaggctaag attattattg atttctttcg taattaaaaa ttgaaacaaa
    35641 tctacacttc caacgcgaaa tgcagaagca caagaacgaa gatacagatc ccacattctt
    35701 acaaattctt catcatattt ttctctgact tgaggtaata cttgattaaa attctcactc
    35761 catatatcta aagttttagc atagtgtatt ctcaagcttt ctgccaaaag aagatgaaaa
    35821 tcccactcac tcatagcact tacaacctct cttaacgatg gcaaataacc tcctggaaaa
    35881 atatatttat ctatccaagc attagttttt ccttcaaaca ttgccaaaat tgaatgcaaa
    35941 agcatagaac ctcctggttt taatacttgt tttgccttca tgaaataaag tcctaaattt
    36001 tctttaccca catgttcaaa cattcccact gaaacaacct tatcaaaata atcctcaaat
    36061 tctaaatctt gataattttg aagtcttatc tccactctat cttcaagctt aagctctctt
    36121 actctttctt gggctttctt gcattgctct tctgaaatag taactccaac aaccttaact
    36181 ccatattttt gtgccgccat aatagaaagc caaccccaac cacaacctat atccaaaagc
    36241 ttttcgttag gttttaaatc gagtttttta agagtatgct ctattttatt gatttgagct
    36301 tcataaagag tatcgctaga agtcttaaaa taagcgcaag aataactcat cgtatcatca
    36361 agccaaagtc tataaaaatc attgcctata tcataatgac ttttgatgtt tttactttct
    36421 tctttttggg ctattttact caagatatct tctttatttt ttaaaaaacg tttattggaa
    36481 aaataataca aaactttagc tatttcatca taatcaccct ctatttctaa cttggactcc
    36541 atataatgtt ttgcaaaaac taaactcgta tcactaaata attttaacaa aggtattttt
    36601 tctttgaaaa ttaaagaaaa tttagcaggt tgattgccca cataaaattc ttcttgatcc
    36661 caaaatacaa ttctaaaatt tccataattc cattttgaaa gaataaattt aatcatttgt
    36721 ttttcaagca tgatatactc caattaataa aaattattat ttgtagtatc tcttaattag
    36781 gtttaaaatt taataaaatc gaagaaaaga aggatttttg ccacagatgt aaaatagtgg
    36841 caaaaatttt ataatattaa tgtagtttag accaaacaga acgcttccag cctatagcaa
    36901 aaatacttag aattacaaag aatatcatta tataaattcc tgtgctttct ctttcttctt
    36961 ttttgctatc gcccactttt tcaagataag aaacaacttt aacttgtgca tcttctgtta
    37021 aacctactct tggcatagca gttcctggaa gaagtttttg agtattattg ataaaatcat
    37081 gcaagtattg ctccccgcga gatctaatca tcatagaaag atcaggtgga accgaaccta
    37141 aataatttgc caagtcatta tggttagatg gggtaaagaa attatcatac ttaatatcat
    37201 gacaacgacc acaagcttct ataaaagtac ttttatcttt agcaaaagca atttcttttt
    37261 caactaaagc tgatttctcg ttagcgtctt caatttttga gtacttaagc tctgcctctt
    37321 gtttaattgt agcattttcc ttagcttcaa atttaagacc tacttctttt aaataagcaa
    37381 taacatcggc tatatttgca tttacaagct cttcactatc tcctgaaacc tcactattgt
    37441 aagcagtcat aatgaaagca tcaccaaatt tatgatctac cttcaaagca agagcaggat
    37501 tcatgatcaa agcagctaaa aacttctcat caaaaataac acctgctgag ctaagatctg
    37561 gtggaattac acctaaagaa gaatctgtaa tatttgctgc tatatcatct tctttaacgc
    37621 catgacatgc aaaacaatta ttattaaaga actccttgcc ttttgcggcg tttcctttag
    37681 taaaatcaat ttttgcaaca tctgcccaaa gctcttctac tttagctaaa ttttctttag
    37741 ccttatctag atctttttga gcactttcta ttctttttgc gtcatttgat tttttcgcat
    37801 cttctaaagc tatttctttt tctgctataa tacctttagc ataagctgta tcttctgctg
    37861 cataatcaaa attagcagga gcaacatggg gcttcattac agagtgcgca taaggctcaa
    37921 ctccccaata aacaagagca gtaaaaacta ctactactaa aaatattttt agctctctca
    37981 ttgcttagct ccttttcttt ccatgatagt tattacaggt aaaacgacta taaataaaag
    38041 taaaaatatt atagaagcat aaaaaccaac ccaagcattt acacctgttg gaggtaattt
    38101 tccataaata gttaaaacga tgagatctat aagcaatacc caaaaccaaa taaaaaataa
    38161 aggtctttca tgagctggtt ttacaacatt acttctatca agccaaggaa gcaagaagaa
    38221 aataatttgt gcgataccaa aagcagccaa acctatatca aaagctttaa tacctgcaat
    38281 atcaaagaaa aatcctctta aaacttcata actccacaag aaataccact caggataaat
    38341 atgtgctggg gttttaagtg cattagctgg atcaaagttg ataggatcca ttgcaaaacc
    38401 aaatttaaaa cttaccaaat agaaaaagaa aatcataaaa agacaaatat acataaagtc
    38461 tttagataaa aatcctggcc aaaaaggaat tactttagaa ccttttgtat cacctgccat
    38521 gtatttttca gcttctaaat caaaatctaa ttcttcagca atttcattat ttacatgagg
    38581 aattcttaaa gaataaaagt ggaatgctat gatagcaatg attactatag gaagtaaaca
    38641 tacatgaagc ataaaaaatc ttgtcaaagt tggatcagaa actgcataat caccacgaat
    38701 ccaaataaca agctcaggtc caataagtgg aattccacca aaaagattag taataacttg
    38761 agctgcccaa taactcattt gtccccaagg aagcatatat ccactaaaag cttcggcaga
    38821 gaatactaca aaaagtagca taccgcttac ccaaatcatc tctctaccac gcttataaga
    38881 accataataa attcctgtta gcatatgaat atagataatt aagaagataa ccgaagcggc
    38941 aacaccgtgc atatgacgcc aaagccaacc atattccact tcctgcatga tagttttatt
    39001 tacactatca aaagcaagag cagtatcagg cttataatac ataacaagca aaagccctgt
    39061 aataaaaagc acagtaaaaa gagtagttaa aataactccc attgcccaaa gaaaattgat
    39121 ttgctttgga atccaatatt ttaccattaa aacatcaagt aatttatgta ctgctagtct
    39181 ttgatcaagc caatccacta gcccattagc ctttctaata tgcgccatat taagcttcct
    39241 ccgtcatttt tttgtattct ggaccttctt cacctagaac aagtttggtt ccatctattt
    39301 taaaaggagg tatatcaaga ggtcttggag gaggcccaaa ggtatttttt ccacttgtat
    39361 caaattcacc accatgacag gcacatttaa aaagttgctc acttgcgtga taagcaggaa
    39421 tacaacccaa atgagtacaa agtcctataa caacagtata tgcagcatta tctaccacaa
    39481 catctcgctt tgtatccttt tccatatttg gatctttttt taagataaaa ataggctttt
    39541 tacgccattc tatagttcta agctctccat cttgcattcc tgataaatct actgtagtaa
    39601 aacccgcagc tttaacactt ggaagcggat cccaagtttt tttcaccgca acaagtgaaa
    39661 aaacaccgcc tacagcagct actgttccaa atgcaaaacc cataaagctt cgtctacttt
    39721 cagatgtagc cataactttg tcctttcgtt tttttatttt taaccaaatt attagtgtat
    39781 ctaaaataaa ataaattttt tctttgttta ctaagttttg ttttaatatt gtaaaacaag
    39841 tgcaaaaagt gaacaagtaa gtactggtaa agtgattaaa aaaccaaatt tacaatactt
    39901 ccaaaaagaa atttctatac ctttttttgc taaaagtccc aaccaaagca aggtagctaa
    39961 agaacctatg ggagtaagtt ttggtcctat attaactcct aaaagatgtg cataaaccat
    40021 actttgagga aaatttttta aagccaaatc gccaatcaat gccataggca gattattaaa
    40081 tacagaagaa agaaaagccg agataaaccc tgttccaaaa atagcagtaa ttgcattttg
    40141 agccaaaata tcatagataa aaattaaaat atcgctgatt ccaactttat gtaaggcaaa
    40201 aaccaccata tagagtccaa aactaaaagc aaaaataccc caaggtacat ttttgataat
    40261 tttcaatgcc tctctttttt ttaaaaaaca aacaaaaaac caaaagagca aagcgccgct
    40321 tacagcaaaa aaactagcat ttaagttata aatttctcct ataaaaaaac ttgatacaaa
    40381 aaatattaaa taaataacac aaaaaataaa aagctttacc gaaatacaat catttgataa
    40441 aatattgatt tcaagcccct taggtaatat ttttgcaaaa atcaaaaata ccattataat
    40501 agtagacaat agcacaaata aattaggcaa aaacatagtc ttagcgaatt ctaaaaaatc
    40561 aagattaaaa taattagctg taataatatt tgtcaaattt gagataatta aagcatttga
    40621 acttgcatcg cacaaaaaag aaacactgag taaaaatgca cttaagatag cgctttcttt
    40681 ataattttta agagttgaaa aaagcgcaag cacaataggc gtaatgatta aaatagctcc
    40741 atcatttcca aataaagccg aaagacaaaa aacaaaaacg agcataaaaa gcattaattt
    40801 tttagtgtga attgcatgag aatttttaag ttttgaaagg cgcaaaattc ttatagctat
    40861 aaaactaaaa aaccctaaca cttccaagct aaaggaaagt ataatcaagc ccacaagtgt
    40921 taaggagcta tcccaaacaa gatcaaaaac aaaaaaagcg tcctctaaat taaccagctt
    40981 aaaaataaat gcaaacaaag ccccaaaaat agaaatcaac cataaaggca aattccacgg
    41041 acgccaaaaa agtaaaatca aggtaattat aaaaattaca ctagcaagca ttaagatttt
    41101 ttcttttgca tttttatata aatttgtaaa atatccaaag ccgcaggggt aatcccactg
    41161 atctcactcg ctgcaaaaag cgttaaaggc ttatgttttt gaagtttttc tacaacttca
    41221 ttactcaatc cactcacact tgtaaaatca aaatcacttg gaattttcat atcaattaaa
    41281 tttttcattt tttcaacttg cgacttttgc atagcgatat aatgataata tttagcctca
    41341 tttaaaattt ctcttaaaga atactcatcc atattctcaa aaatcgtatt taattttttt
    41401 agcttttcta tatcaaaact cgatcttgcg acaatttttt gcaaattgac tatggaagtg
    41461 attttttcct ctcctatgct cgctaaaaag gcattatttt cagtatttgg agtaaattct
    41521 ttttcaagaa gcaattcaag tcctttttga gtatttaaac gaatattttc tataaactga
    41581 taagactcat cttctaaaag acccaaccct ttaccatatt ttccaagtct tacgatggca
    41641 ttttcttctc ttaaaagcag tctaaattca gcccttgaag taaacatcct ataaggctct
    41701 tttgtgccct taatgactag atcatcaatc aaaacaccga tataagcctc atctctacgc
    41761 aaaataaaag gttctttatt atccaaagct aaaacagcat tcactcccgc cataaaacct
    41821 tgagctgctg cttcttcata tcctgtagtg ccattaattt gtcctgcaca ataaagattt
    41881 ttaatttttt ttgtttctag agtatgataa agctccgttg gttctatata atcatattct
    41941 atagcatagc caaagcgtgt aattttagac tcttcaaaac cttttactga gcgtaacatt
    42001 tgaatttgaa cttcataagg taaagaagtt gaaaagccat taatataata ttctgttgca
    42061 tctatagttt gtggctctat gaaaagatga tgactttctt tctcgctaaa acgattaatc
    42121 ttatcttcta tagaaggaca ataccttggc cctacacctt caatctggcc tgtaaaaagt
    42181 ggggcacgat aaaaattatt cttaataatc tcatgagtat ttaaattggt tcttgcaata
    42241 tagcaaggaa gttgtatggg attaaaattt tttgttctaa agctaaaagc tttagggttt
    42301 tgatcgccgt attgaatttc taatacatca aaatcaatac tcttagcatc cactcttggg
    42361 caagtccctg tttttagtct acccattttt aagctagtac ttaataaatt ctgacccaaa
    42421 ttcacagagg caagctcccc taccctaccc gctgtaagtt tattttcccc cacatggata
    42481 agtccgttta aaaaagtccc tgtagttaag atcactttct tcgcttcata agtattttga
    42541 agattggttt taacccctac aacgctacca ttttcataaa tcaattcgca tacttgctct
    42601 tgagaaattt ctaaattctt aagctttaaa agcttattgc gtgcaacgat acgatattta
    42661 tccatatcaa tttgcgccct acttcctcgc accgcaacac ccttactttc atttaaaatg
    42721 cgaaattgta tccctgcttc atcggtgatt tcacccataa gaccacccat ggcatcaagt
    42781 tcttttacca aatgtccttt tgcaagccct cctatagccg gattacaact tgctgctcct
    42841 atttgctcaa tcaatgtagt taaaagtaag gtttttttac ccattctagc agcagcagca
    42901 cttgcttcaa cacccgcatg tccgccacct ataacaatga catcaaacat attttgcctt
    42961 aaaaatgtga attattaaaa gaaagattat ataatactta gacttaaaac aaactcgttt
    43021 taagtctaac aaaaaattat ctagtttctt gaagagagaa aattaactca ttataagttt
    43081 tatctgcatc tttgcagaaa tttttaagca tctcaacacc cttatttaaa ccttgttgtt
    43141 gttctgctct taaaagatca ctataaaggc tttctatcgt agaaatagcg cttttatttg
    43201 gcatacgacg aacggaataa tagcctatga tattattatt aatatctatt gatggagtta
    43261 catttgcaaa aacccaataa taattattat ctttggtttt gttttttacg taagcaaaaa
    43321 tttccctacc ctctctcata taatcccata aatatttaaa aacagttttt ggcatctctt
    43381 catgtcttac tatgttatga ggtttattta aaacttcacc catggtataa cctgcatact
    43441 ttaaaaaatc atcatttgca taaactattc taccttttaa atctgtttta gaagtaatta
    43501 aactatcttc ttgcaaaaaa atttctcttg acattttccc accctcttaa tttatatttt
    43561 taattttgct aagatttcag cacttctttg ctctagtgat ttaatatcat ttacaatcgc
    43621 atcataagct ttttgatcga tataatcttg acttgattct tctattgctt ttttagcgtt
    43681 atcttttata aattctttag ctaaatttaa ctcagtttca gaactaagct cattaataac
    43741 accttgagct ctctcatctt gacaaagatt agaaattgga tctacacttt caagattgaa
    43801 attttgagcc ccatttaaat ttaaatatat atttgattta taaagaatat gatcgatttt
    43861 aaccacagac aaaatcaatc tctttgcaaa ggatccaaaa ttaacaccaa gagcactact
    43921 attttcttct agacgtttaa aagcttgaga aaatttatta attctttctt cagattcact
    43981 aacaatgtta aaaacttgct cactaccact ttggatattt acaaaatctt gttgcatagt
    44041 ctgaattgca atagaaattt cgcttgtaga tctttgagtt ctttctgcta actttctaac
    44101 ttcatcagcc acaaccgcaa agcctctacc atgttctcca gcacgcgcag cttcaatagc
    44161 agcatttaaa gctagaagat tggtttgatc ggctatatcg cgtattactt caaccactga
    44221 agtaatattt tgggaattag ccacaaaagt ttgcactgtt tccttgctca aatttacaac
    44281 atccattaaa gaacccatag cattttgcaa agaatcaact tcagaaccat tttctgtagc
    44341 tgtatgagaa atggcatcca ctgtatcata tacatttttc atcatgctaa tatcttgatt
    44401 taatgagcta gaaatttgag acatatcttt attttgattt ccaaggctta aatccattaa
    44461 agttcttgat aaagcatttt taaaagtaga tcttgctgtc acttctatgt ttgctaaagc
    44521 tttatttata aattcgatat tatgagcaaa aattcctttt aaaccttcag gcaaagcctt
    44581 gcgataaaat tcaccttttt gagaacatga aatagaagta ttaatttccc ttaagtaagc
    44641 ttctagccca tcaatagtat tgttaagatt atctgctatt tcggctaatt ttttgctttt
    44701 tgtttttaca tagatgattc tattgtcaaa atttccttct tttaactctc tacaaagaac
    44761 caaaagttta tctatcatta tttgctcatc tttgtgttgt ctaagcaaat aaatcattaa
    44821 aacagcgatt aaaacaaaaa ttatcactcc aacaaaaata tgaataaaaa tgacacctaa
    44881 aacaccgata acacttagaa aaatagttga taataatcca tttttcatca taatttatcc
    44941 ctttattaaa aatttttgaa ttcataaatt aaagcaatac tttaataata tattacttta
    45001 aatttttagg cgaagattgt acaataaaaa agattaaata tatcttattt agttattttc
    45061 ttgtaagtga aaaacaagtt cattataagt cattttataa gaactcacaa tatccattaa
    45121 agctgaaact ccagcattaa tgcctgattt ttgctctttt tcaagtaaaa ttttataaat
    45181 ttcttcaatt atagaaagag attttctatt aggcgcacgg cgaacagaat aataattgat
    45241 gatatttcca ttggcatcaa atgaagcact tacatttgca aatacccaat aatatcttcc
    45301 atctttggct ttatttttca caaaagcaaa aatctcttta ccattttgta cataatccca
    45361 caaacattta aaaacagtgc ggggcatatc ttcatgtctt actatattat ggggctttga
    45421 taaaagttca ccaacactat aacctgcata ttttaaaaaa tcattattag cataaatgat
    45481 atttccctta agatcagtct tggatgtaac aagagcgtct t
//
LOCUS       DAQUWA010000005        42979 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.005, whole genome shotgun sequence.
ACCESSION   DAQUWA010000005 DAQUWA010000000
VERSION     DAQUWA010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 42979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42979
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.005"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            2..757
                     /gene="proB"
                     /locus_tag="R8X70_000202"
     CDS             2..757
                     /gene="proB"
                     /locus_tag="R8X70_000202"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEF2928023.1"
                     /translation="MQRIVVKVGSHVISDENLLNLKRFENLVAFLTKLMQKYEVILVT
                     SAAISAGCTKLHIDRKNLINKQVLAAIGQPFLISVYNEFLAKFGKMGGQILLTGKDFD
                     SRKATKHAKNAIDAMIDLGILPIINENDATAIEEIVFGDNDSLSAYATHFFEADLLVI
                     LSDIDGFYDKNPSEFSDAKRLERVEFIKEEWLNVSVKTGSEHGTGGIVTKLKAAKFLL
                     ENHKKMFLASGFDLSVAKAFLLENKQIGGTLFE"
     gene            1024..1752
                     /locus_tag="R8X70_000203"
     CDS             1024..1752
                     /locus_tag="R8X70_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928024.1"
                     /translation="MSILVNAVDTFYSTKNEAVFSASKSENIKRNVADFNTDNNTKNS
                     VYFFSDDKEISLNLSNESMELLTNHFSANDFLKLSNGNIGLSGKAAAFVEGWYKDIMI
                     NRNFLNADRDKNGRIENNEHLSLKNSVEDVAKNQDLSKNFGAVVLRMTQSTTGYVENT
                     ISDKSLSIEALIDESIKSDRNFDGIITRLEYSAKGGTDMQGYTNWAIDALNDILDDSD
                     KAKNSFSCRSYKQNLAFVCRQNIK"
     gene            1667..2059
                     /locus_tag="R8X70_000204"
     CDS             1667..2059
                     /locus_tag="R8X70_000204"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928025.1"
                     /translation="MIAIKPKIHLVVDPTSKIWHSYAGKTLNEVKAYYDNPFRATSGT
                     SASGFLNIVIEEPRILPSNDLENEKEQLLNEFPEFRALIQNNPNITKEKLLKLKNQQR
                     ITHNYQDHQKQDLQKEFTQNFFKTDLKA"
     gene            2201..3118
                     /locus_tag="R8X70_000205"
     CDS             2201..3118
                     /locus_tag="R8X70_000205"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEF2928026.1"
                     /translation="MKKIIFMGTPSYATCILKALLEDENFELLALFTQPDKAVGRKQI
                     LTPSDTKAFLLQKAPQIPIFTPNSLKDESVIEQICALKPDFIVVAAYGKILPKAILDI
                     APCINLHASLLPKYRGASPIQSAILNADEKSGVCTMLMEEGLDTGAVLESVECDIRDK
                     NVNEVFEILANLAAKLTLSTLLNYEKLLPKKQDESLATHCKKIKKEDGLVSLDNAREI
                     YQKYLAFTPWPGVFLENGLKFIELELVDELKQNAKMGEILELEKESFLLACKQGILRI
                     KKLQESGKKALDGRTYLNGKRLKSADSLC"
     gene            3081..3734
                     /locus_tag="R8X70_000206"
     CDS             3081..3734
                     /locus_tag="R8X70_000206"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEF2928027.1"
                     /translation="MEKGLKVQIACVESIDSTHLFLCEQIRSGKINENFALYALNQTK
                     GVGSRENSWQSSSGNLHLSFCIKEGDLPSDLPLASVSIYFAYLLKEILQEKGSRIWLK
                     WPNDLYLDDKKVGGVISTKISDFIVGGMGLNLKFAPHDAALCDVEILLKDLIQEFLQR
                     LEKKFLWKHIFSKYMLEFEKSRQFSVHYEGKVFSLENAFLYEDGSILLGDKRVYSLR"
     gene            3731..4516
                     /locus_tag="R8X70_000207"
     CDS             3731..4516
                     /locus_tag="R8X70_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEF2928028.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMILKNQIQEVLDEYDFIIIDSPPALGSITINAFVASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINPKLKVRGFLPTMYSSQNNLSKDVVEDLKQNFKKQLFTINGNED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSLAYQNLAYSILG"
     gene            4521..5357
                     /locus_tag="R8X70_000208"
     CDS             4521..5357
                     /locus_tag="R8X70_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEF2928029.1"
                     /translation="MGLNKNRGLSTLMGDVGEVYSRELGLDKNQVSLVEISKITPNPF
                     QPRKTFDEAALNELANSIKEHGLIQPIIVLKKNDSFILVAGERRLRATQILGKENILA
                     FVSDSDESKLRELALIENIQRENLNPIELANSYKDLIEVYNITQENLAELIHKSRTQI
                     TNTLRLLNLDPKTQDLIASGKISQGHAKVLVGLDKEDEKVLVDSILGQKLSVRDTERL
                     VQKVKNKENTEDVEFENSMQSLKQTLNKLGFASKNNKKELIIRLDNIEKIKKLTEILN
                     KF"
     gene            5416..5841
                     /locus_tag="R8X70_000209"
     CDS             5416..5841
                     /locus_tag="R8X70_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HEF2928030.1"
                     /translation="MFEDMHPSIMLATMAIFLAMIVILNTMLYRPLLKFMDERNDSIK
                     NDENKVKENSQEMLGANDEVEAIHVSTREEIHKIKQNAINAAKEEAQQAIKAKKEELE
                     RKMANFYTELVSQKKELQDHLSAHLPDLKQALQNNIKQH"
     gene            5854..6366
                     /locus_tag="R8X70_000210"
     CDS             5854..6366
                     /locus_tag="R8X70_000210"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEF2928031.1"
                     /translation="MKKLFYFIFLLPLCAFGASNGSGEYDIVPRTINFLIFVAILYYF
                     VANPFKAFYKNRILRISLKLDEIQKKLLESKAKKLDTMKKLEEAKANAAAALVVAKKE
                     AEVLAQKIKEETQNELALLEKHFEEQKDYEFRKMEKEVVSLTLKEIFEDSNIALKQNE
                     IIDIMMKKVS"
     gene            6366..6887
                     /locus_tag="R8X70_000211"
     CDS             6366..6887
                     /locus_tag="R8X70_000211"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEF2928032.1"
                     /translation="MNDLIAKRYAKAIALREDISEFYDNLSILSSAFASPKFKNIIES
                     NQIQKEKKLEFVISLIEKASPSFNNFLKLLAENSRLSCIPQIAKELERQKSFKENIFL
                     GTVYSKEVLSEDNIKELENRLSAKFGVKIKLQNKVGLNEGVKISLEELGYEISFSMKA
                     LQNKMSEYILKII"
     gene            6900..8405
                     /gene="atpA"
                     /locus_tag="R8X70_000212"
     CDS             6900..8405
                     /gene="atpA"
                     /locus_tag="R8X70_000212"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEF2928033.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFDNGDKGMALNLEESSVGIVILGKGEGLKEGTSVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINSNEFRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQKGQGVVCIYVAIGQKQSTVAQVVKRLEEHGAM
                     DYTIVVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGYLDDVAV
                     SKIREFEDGIYPFIEAKYPDLFEQIRSKKALDAELEEKLAKAINEFKANHL"
     gene            8415..9299
                     /locus_tag="R8X70_000213"
     CDS             8415..9299
                     /locus_tag="R8X70_000213"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEF2928034.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSRV
                     YAQKIDEILSEISFQVNKIVHNEEDSRFVLFHKKNQIKNVDLIFITADKGLCGGFNIK
                     TLKAVSELLKEYEEKNINVRLRAIGKTGIEYFNFQKIELLEKYLGLSSSPDYDKACSV
                     IQAAVDDYLNGITDEVVLVHNGYKNMITQELKISHLIPVEPKQIEGNSNSLLELEPED
                     TDLLGDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            9326..10723
                     /gene="atpD"
                     /locus_tag="R8X70_000214"
     CDS             9326..10723
                     /gene="atpD"
                     /locus_tag="R8X70_000214"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEF2928035.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKQKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGELIDEGE
                     EISFDKKWAIHRDPPVFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRSIAEKGI
                     YPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     IVERARKIEKFLSQPFFVAEVFTGSPGKYISLEETIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            10727..11116
                     /locus_tag="R8X70_000215"
     CDS             10727..11116
                     /locus_tag="R8X70_000215"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEF2928036.1"
                     /translation="MDNLISFEIVTPMGVIYQGEVKSVTLPGSEGEFGVLKGHAALVS
                     SLKSGVIDIEKADLNHELIAIDAGHAKVDEDKISVLAKGAVWISGSSESEIEKNLESA
                     KELIKSMSSDNTALAATFSKLDNAKVR"
     gene            11117..11671
                     /locus_tag="R8X70_000216"
     CDS             11117..11671
                     /locus_tag="R8X70_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEF2928037.1"
                     /translation="MNFEAIFQFFGSSSIITYIVLAWLSLYFILSFFILFSRVTYLAA
                     WKNKEKESLEALLLGEKDLSRTRSILRKCTDTSLSHLEIYKNLASRRASNGLTWLSIV
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSNK"
     gene            11682..12071
                     /locus_tag="R8X70_000217"
     CDS             11682..12071
                     /locus_tag="R8X70_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HEF2928038.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKSTSAPSVKSLIVSINAKKEIFLNQEKYSFVSFADNLAQKKAQFNTDEPVFIRADK
                     SLKYDDVIFVLKSIKNLGFNKVALQTE"
     gene            12075..12851
                     /locus_tag="R8X70_000218"
     CDS             12075..12851
                     /locus_tag="R8X70_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HEF2928039.1"
                     /translation="MKEYGLGKINSFLLAVAVYVFIIILIFFRLVAHIQPAIQYTDIQ
                     DSFIDIELMEPSKKVVNEQSAPKDIQKPAQELDIEKLFAQTTNKAVKTEDVDQKASNF
                     NELFGSIKEIQEEKTTKIQSSAKSETTSSSKTQASELVKQLNDSLLEEESINQGESIK
                     NQKTGIYDEFLGKVVRTIAQRWRQYHPNSENISVKVKIFIDENGNFGYTSVEKSGNSL
                     YDAKVAEFLENQKGKFIAYPPQNKSISITMNLKDEAQIQK"
     gene            12865..14076
                     /gene="tolB"
                     /locus_tag="R8X70_000219"
     CDS             12865..14076
                     /gene="tolB"
                     /locus_tag="R8X70_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HEF2928040.1"
                     /translation="MKKIVTVFLIFLGILWAEDPVIDVVNSGVVLPKIIVKDNSNLSD
                     INLKRSFYNIIVNDLKVSSNFEVVSDASSEAANYTFEYDLSKNGNALNLHVKIKAGGL
                     EKSSQTYALNGVEQYPFLAHKSVKASVNALGLAPVEWMDHKILIARNSSSKKSQIIMA
                     DYTLTYQKVIIDGGLNLFPKWGNKEQSIFYYTAYDHDRPTLYRYDLRTNKASKILASG
                     GMVVASDVSLDGSKLLVTMAPKDQPDVYLYDLNSKNLTQLTNYSGIDVNGNFIGVDDS
                     KFVFVSDRLGYPNIFIQNLNNGSAEQAVFHGKNNSAVSTYKDFLVYSSREPNQVGVFN
                     IYLMSINSTGIRQFTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFP
                     LKVGKIQSIDW"
     gene            14153..14650
                     /gene="pal"
                     /locus_tag="R8X70_000220"
     CDS             14153..14650
                     /gene="pal"
                     /locus_tag="R8X70_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEF2928041.1"
                     /translation="MKKILFSSIAAFALVISGCSTKSTSVSGDTSVDSNRGTGGSDGW
                     DIDSKISQLNDTLGKVYFDFDKFNIRPDMQNVVNTNANIFNNEVSGVSITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAQGVNSDRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            14654..15607
                     /locus_tag="R8X70_000221"
     CDS             14654..15607
                     /locus_tag="R8X70_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEF2928042.1"
                     /translation="MKKIFSVALIGATLLYAESSAFGAGDLTSNSPYGLTSSEKLLKE
                     KLDTLSNNNVQANSRINEIEQRVEGLQSTLEGINSQYAKSNSRLTQLETRFEAMENNL
                     STELQNLKAYVEESRKIQDANNKQIKKILTELSSLVDSINANYVSKDDLNSTNLSIKN
                     TVVVPLSIDDKNITSSDENNASVAPVQEKEVKQIDDSWKKKKNNEILDLAIKDLNNNS
                     YENSKIKLNYLISKQYKPARANFWLGEIEYKQKKYNNAIAYYKKSSALSTKGDYFPKL
                     LYHTAISLDKIGDPKTANGFYKALKTNYPNSPEAKASPNRK"
     gene            15623..16195
                     /locus_tag="R8X70_000222"
     CDS             15623..16195
                     /locus_tag="R8X70_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEF2928043.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYAQPISFILGKGQILE
                     ALEEEVMKLDCPSNADVVIKKDKGLGEYDENAVQVLPKEQFAGIDLKIGMELFGEGEN
                     GETVRVTVKEISDNDVTIDYNHPYAGRDLLFSLNIVDARAASEDELLTGIIAGSHSCG
                     CGSGHGHGHDHHGHGGGGCCGGGGGGCGCH"
     gene            16197..17117
                     /gene="fabD"
                     /locus_tag="R8X70_000223"
     CDS             16197..17117
                     /gene="fabD"
                     /locus_tag="R8X70_000223"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEF2928044.1"
                     /translation="MNAVFIFPGQGSQSLGMGKDFYENSKTAKELLENASDFCKIDFK
                     NLLFNENDDLNKSEFTQPAILLNSLMAYSALSELKPDIKVKFALGHSLGEFSALAING
                     AFSFLEATMLVHKRGLFMQEDCAKVEAGMMVILGLDDKKVEELCQKARDEDKKIFAAN
                     YNCDGQIVVAGLKPDLASYESVFKEAGAKRAMLLNMSVASHCPLLENASNKLCIELEK
                     ILEPTFKAVISNATAKAYTSKQEALELSKTQLVAPVLYKQSIKACENEADCFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIEEFLKVI"
     gene            17118..17804
                     /gene="pfs"
                     /locus_tag="R8X70_000224"
     CDS             17118..17804
                     /gene="pfs"
                     /locus_tag="R8X70_000224"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HEF2928045.1"
                     /translation="MKIAILGAMSEEITPLLETLKDYTKIEHANNTYYFANYKNHELI
                     LAYSKIGKVNSTLSASVMIEKFGAQVLLFTGVAGAFNPELEIGDLLYATKLAQYDLDI
                     TAFGHPLGFVPGNEIFIKTDDKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKAK
                     IREIFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKISA
                     NFVLKMCEKL"
     gene            17801..18556
                     /locus_tag="R8X70_000225"
     CDS             17801..18556
                     /locus_tag="R8X70_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine biosynthesis protein TtcA"
                     /protein_id="HEF2928046.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHL
                     LNRMQAHAPFKFEFEAVTLSYGMGEDYSGLHAHCEEHGIKHSVLDSNIYEVSGDTIRE
                     NSSFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLVPIY
                     QSKRGITVIRPLIFVRERQLRDNATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKDHPKLFTSLKTAFANLHTESFWLQKA"
     gene            18561..19082
                     /locus_tag="R8X70_000226"
     CDS             18561..19082
                     /locus_tag="R8X70_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HEF2928047.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTH
                     LLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSL
                     ELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDKNLEKS
                     AFDLLRAYGIEIV"
     gene            19082..19696
                     /gene="recO"
                     /locus_tag="R8X70_000227"
     CDS             19082..19696
                     /gene="recO"
                     /locus_tag="R8X70_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HEF2928048.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKMLIKVYRFYGLRHSSILSGY
                     KIDFALEENPSFLPRLKDVLHLGFLWIMQRDKMLIWQEFIRLLYRHLKDVEELDSFYF
                     DLLQECVKRFEKQNPKRVIVDAYLKILEFEGRLHKDFFCFACDEKIQNSITLLRAFLP
                     SHSQCALGFEFEEKKLKQFYSSKNCAIFDDEEIENLYHLIKEGL"
     gene            19693..20100
                     /gene="ybeY"
                     /locus_tag="R8X70_000228"
     CDS             19693..20100
                     /gene="ybeY"
                     /locus_tag="R8X70_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEF2928049.1"
                     /translation="MILSDEKCDFLEPIASFLSSKHVELVFVESKEMQEINLEQRKQD
                     KTTDVLSFPLENIDESLPLGSVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGF
                     DHENDNGEMREKEKELIEHFNLPKSLIVRTLEG"
     gene            complement(20228..20349)
                     /locus_tag="R8X70_000229"
                     /pseudo
     CDS             complement(20228..20349)
                     /locus_tag="R8X70_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343522.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
     gene            20420..20731
                     /locus_tag="R8X70_000230"
     CDS             20420..20731
                     /locus_tag="R8X70_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928050.1"
                     /translation="MLKKLTSSLILGSLLASSAFAGDFLAKVSNGALSDNSQGVKALN
                     LDEMKQVKGGAISQDGRIAPLLVYGGRQLAMWGIRYAAWGAYQERHPINSGIGIHGWR
                     P"
     gene            21184..21969
                     /locus_tag="R8X70_000231"
     CDS             21184..21969
                     /locus_tag="R8X70_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928051.1"
                     /translation="MINSLNSNLNYDYNTSNFKQDKNIDFKINKHGVAVITGEGALPY
                     RGKKFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSPLKDFNPAYTKWDP
                     TTEKMMLGFFVSYSKMFHLGYDIIKKADEFYKEFDALISKDLSLDEFKTKYIDFKQRH
                     DEFVKEYEMTMGDKMLLSSDNEIITQQSEKPFKAIQGESKNKETYKDDSTRNELVKKL
                     LEGKFSTSEELELLFGMKFSDDAGEFNKILSLNSAPKIIDIKA"
     gene            complement(21994..22920)
                     /locus_tag="R8X70_000232"
     CDS             complement(21994..22920)
                     /locus_tag="R8X70_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEF2928052.1"
                     /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFKNLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGV
                     DFVSIHGRTRKQLYSGKADYESIASAKASVKIPVIANGDINAQNAKEVYKITKCDGLM
                     IGRASVGNPWIFHEIKSGKSVDEKFKKEIILTHFDEMIKHYKDQGISIFRKHLHEYSK
                     GHKDASAFRDSVNRIDNVEEMRKKIEEFFSLT"
     gene            complement(22917..23903)
                     /locus_tag="R8X70_000233"
     CDS             complement(22917..23903)
                     /locus_tag="R8X70_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928053.1"
                     /translation="MKIRLFFIASFIYIALIFALAWYLELGNYTLNFNTYSFELPIMI
                     WLILPLIPLVFFAIIHMGFYYFLLTLKFKHFFKDSTKFENFTRDLLLEKESNISFQTK
                     EFRQVAQLAKTLKTHEKIPNANKINEILDLIDGIKKEEYFNLNKFKLENNNILFLENE
                     KNHIKNDINYAYSKIKNLSQTQDEFQDLAFESLIKKGTYEQIKNIKITKKPCHILTLI
                     KRFKEGNLELSVAEYEVLLSHNILSEKDYLNAAKLSIKLLNPDAILGIFNKIKNEKSE
                     ALRAYLYLLAEFGLLDELREQIHNDDKKFNDFKAFLTLREKNIKIDLNQLIQ"
     gene            complement(23900..24253)
                     /gene="dksA"
                     /locus_tag="R8X70_000234"
     CDS             complement(23900..24253)
                     /gene="dksA"
                     /locus_tag="R8X70_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEF2928054.1"
                     /translation="MKKNEIQVFKTILENRKKTILENLQSNSKEIEALHNSVPSDSVD
                     FSVIETGSQIDFAISANLKQELEEIEDSLEKIKDGTYGICESCDEEIAIERLKIKPHA
                     KYCIVCRENLEKGEL"
     gene            complement(24265..24714)
                     /locus_tag="R8X70_000235"
     CDS             complement(24265..24714)
                     /locus_tag="R8X70_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEF2928055.1"
                     /translation="MQVNIFHIQKNDEFKIWGEKYAKLISKFADLKEHNLFNKKIAAA
                     QNLNAQAAKLSYEEAFAPYTKGFCIVLDERGKELTSVEFAKLIADKNNLNFFIGGAYG
                     LRDEFSQSLDFRLSLSKLTLAHQFVKILLLEQIYRAFCINSNHPYHK"
     gene            complement(24716..25558)
                     /locus_tag="R8X70_000236"
     CDS             complement(24716..25558)
                     /locus_tag="R8X70_000236"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEF2928056.1"
                     /translation="MNFADIFSKIRRQQPSTKEAPNHWVKCQSCHALMYYKEIESCFN
                     VCPKCSYHMRISPMDRIKLLSDENTFVEYDANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSAVISGECLIDGLKIQLVVFDFSFMGGSLGSVEGEKIVRAIQRAITDKTPVVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISVLTDPTMGGVSASFAWLGDLII
                     AEPGALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERSDMKKYLSDTLKF
                     FCGK"
     gene            complement(25573..26289)
                     /locus_tag="R8X70_000237"
     CDS             complement(25573..26289)
                     /locus_tag="R8X70_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEF2928057.1"
                     /translation="MKQFLDACLKANLQISEYLNNICESDLSFCPELGFDNNQSYKLD
                     LKCEKIFIEHLCNLGQIFSEESGLIGENSPYKIILDPLDGSSNFVSKIPFYGTSAALF
                     KDEEAQSAFICNLANHEILIFDDNKNLKSNLFNPNYSPFLPNHFSQIGIVEKITLCPS
                     LINHLAQNKLKFRSLGATALSIAYAPYFSFVLVLGKTRIFDTAGALMLCKNLYIENNE
                     NFLLISKDKKIFDIILEFLK"
     gene            complement(26289..28505)
                     /gene="bamA"
                     /locus_tag="R8X70_000238"
     CDS             complement(26289..28505)
                     /gene="bamA"
                     /locus_tag="R8X70_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEF2928058.1"
                     /translation="MKKIISICALVALSNAAVIKEIKFSGLNHLSNASALNLTGLKIG
                     ETINLDKINTAILNLYKQNYFENIAVEENNGILNIIVTEKPSIAKISITGIASNDRKQ
                     VESILGIKRGTLFDEASAKEASERIKAYYEAKSYFDTIVEYRKKTLENTEGLELEFIV
                     NRGENIIINNVNLSGAEKFSYSDIEPAIVNKEKEFMGWMWGRNDGKLKIFELSNDSAR
                     ISDEYMKKGYLDVQVSSPYLKTYTDTYQANLTYFIKEGKPYKIENISIENPLFSEEEN
                     IQNVKNLRSTQGKLINIEDIRKDVKTIETQSADLGYAFAEVYPDIQKNDQTQEASVVF
                     KVIPHDKVYIRNVIISGNSRTVDRVVRRELYITEGNLYNRTDLSESTNALRRTSYFDD
                     VEIKEEKVDDTHIDLIVNVKEASTGAISGGIGYGSSDGLLLNASLSDTNIFGSGIKSS
                     VSVDKSDDTLSGRISLINPRILDSQYSLGGTLYSNDYEWDNYSEKNYGFDITLGRQFA
                     RYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKTIKSSITPAITFNNTDDYYLPRKGII
                     ASTSLEYAGLGGDQEFLSSSSKFNFYQGLQDYIGYDLIYRYKASFYKVWDEGYLPINQ
                     RIYLGGIRSLRGFESRTVSPKNEWGDEVGGTIAFANSVELSFPLIDRIKLRGSVFFDY
                     GMIGNKNLDEIQRMSTGLGIEWITPIGPLQLVFAKPLNDKKGDDTNTFEFNLGTRF"
     gene            28581..29408
                     /locus_tag="R8X70_000239"
     CDS             28581..29408
                     /locus_tag="R8X70_000239"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEF2928059.1"
                     /translation="MKVAIIGLGLIGGSLGLCLKENKLISCVYGLDSSKENEQDALNL
                     GLVHELIEFENLHLCDMIFIATPVNAIIEILQKLVNLPSNTTIIELGSTKRKIIEKLP
                     AKLTKQTLFAHPMAGTENSGPKAAFKELYKDAVCVLCDSEVADDLHQKRAVEIFSHLG
                     MRIVFMDSTAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPIMWGSIFEQNKDNVLSSIEFFQKELEFCKKMIEEDKNEELKSWMQKANTLREIL"
     gene            29506..30879
                     /locus_tag="R8X70_000240"
     CDS             29506..30879
                     /locus_tag="R8X70_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEF2928060.1"
                     /translation="MARKKGKIYLYLLVLVLIGVLAFFISKTNAFETTPPKILMPDII
                     YSDLKKPISVHVKDDEGSIESVQIFLQKEGNETGMLIADEKIQNSNDITLQVALPKLA
                     YKEKVKSFIMEIKAKDKSFWNFFGGNEASKQVLIMIDDSAPKVNVLSNSYQIEQGGAA
                     SVVFSASDANLDKVYIETNTGKIFQATPYLKEGYYAALIAWDARDEEFRAYIIATDKA
                     GNITKERIRYYFVNRKYRVSNINLTDRFLDGKIEDLAQEYAPKDNNFTRFEKFKFVNE
                     TLRGNNEILIHKITSEVPESKIDDFKIDLFLPLRNGMKVADFADHRYYSYNGQFVSDS
                     YHMGIDLASVAEAPIISNNSGKVVFAEENGIYGLNLIVYHGFGVYSLYGHCSSKSVEL
                     DEILSKKSVIGRTGVSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNEGK
                     KIILGKN"
     gene            30879..31763
                     /locus_tag="R8X70_000241"
     CDS             30879..31763
                     /locus_tag="R8X70_000241"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEF2928061.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLN
                     ATYKASPENVINTQMATVLGDERGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGDKYVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRDMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYISYAGSHHLNHLLTKEVLKDKDAY
                     EIVTLEKANEKAYEKVFA"
     gene            31775..32203
                     /locus_tag="R8X70_000242"
     CDS             31775..32203
                     /locus_tag="R8X70_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HEF2928062.1"
                     /translation="MLNALSKPLMIGIYQDDKLVKSIESEEKASEFVPKILKILLKEF
                     SFDELIYANGPGSYMGIKISYVSLRTLSIVKNIPLFAISAFELNNNQPIAAHKNMCFV
                     KKEDEIILEENTAGEFFLPPNLSKLNKKDDNLPFYFLSAI"
     gene            32221..33099
                     /locus_tag="R8X70_000243"
     CDS             32221..33099
                     /locus_tag="R8X70_000243"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004288104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEF2928063.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLALFNHTIIEKSNFFSISVNGE
                     GSENLSLKKNNIFVSIFNEIYQRLSGRKDHFRFIFDNAIPLSRGLGSSSAVIIGAIAS
                     AYEMAGFKAEKEKILNKALKYENHPDNIAPAALGGFVVSMVENEKVFSIKKDLDENLN
                     AVVVIPNVAMSTEQSRNALPSNLSLKDCVFNLCHSSFLTACFLEKKYDLLALASKDLL
                     HQTRRMQNLPELFEVQKFALENKALMSTLSGSGSSFFNLAYKDDAKHLAQKMEQKFRN
                     FKILCLEFDNKGFKIC"
     gene            33153..33386
                     /locus_tag="R8X70_000244"
     CDS             33153..33386
                     /locus_tag="R8X70_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF448 domain-containing protein"
                     /protein_id="HEF2928064.1"
                     /translation="MCIVCKNRYLQKNMHRFKHFQGELYKDFAFGRSVYLCETCILSE
                     GKVLQKAFFKSCKNLNTKITQQNLKEIVLNGKN"
     gene            33373..35943
                     /gene="infB"
                     /locus_tag="R8X70_000245"
     CDS             33373..35943
                     /gene="infB"
                     /locus_tag="R8X70_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEF2928065.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLNIKTASNAVEPEVAA
                     GIYEYIQTKIIPEAFKKNLKQDPVKKAKAAPKEEKKEEKSPKEVETKAPAKVVEEVKP
                     EPKTPEEPKENIQESLASATLAKRRGLVIVKKKKDEEEAAKKEEPKASTPSNEERLSL
                     KTMFSNADENLKKKKKEKKPFVATKKESAEKMDFLEGHDFADISLEDEDVVVLPDFSV
                     KEQEKPQNTMKKPPNFLRQAVGNSANLGLEGGIQRRSRKKPPKKVEKKENEAVSSVEI
                     SKEIRVYEFADKIGKSVSEVISKLFMLGMMTTKNDFLDEDAIEILAAEFGIEINIINE
                     ADEFDYVKDYEEEVDEKDLVSRAPVITIMGHVDHGKTSLLDYIRKSRVASGEAGGITQ
                     HVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAIN
                     HAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKTGMGIE
                     DLLEIVLLQADILELKANPKSFAKASVIESSIQKGRGAVATIIVQNGTLKVGSTIVAG
                     EAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAVKSDKEAREYANKRH
                     EYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLEALKASLEKLRNDEI
                     KVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEIKERAKDKGVEIKTYNVIYN
                     LLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCMVTEGVINRGAKIRLI
                     RDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGDYIESYKEVEEQASL
                     "
     gene            35940..36302
                     /gene="rbfA"
                     /locus_tag="R8X70_000246"
     CDS             35940..36302
                     /gene="rbfA"
                     /locus_tag="R8X70_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEF2928066.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            36292..36714
                     /gene="rimP"
                     /locus_tag="R8X70_000247"
     CDS             36292..36714
                     /gene="rimP"
                     /locus_tag="R8X70_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEF2928067.1"
                     /translation="MNLEALCKEAELSFYDDELVSENGKKIYRIYVQKEGGVNLDDCA
                     KLSEILSPIFDVEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITTGEKEKIE
                     AKIISVEDENITLENLENQEKTTLKFSDIKKARTFIQW"
     gene            36788..37075
                     /locus_tag="R8X70_000248"
     CDS             36788..37075
                     /locus_tag="R8X70_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928068.1"
                     /translation="MLEDKYDWKISKADQNGNVYYYFPKDEDEFKEAVVKNGGMSVYV
                     YQDDKLIDEFHTKSQGYRWKTPIFTYIKNMNKDREKFRRYYKNCKFFAIVD"
     gene            37087..37281
                     /locus_tag="R8X70_000249"
     CDS             37087..37281
                     /locus_tag="R8X70_000249"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928069.1"
                     /translation="MKFVEFNFSNGEKIQTEIKESNEENFRAFLEKRLKNFDQYIKAT
                     KGIIEECKRLNIVNRDEIII"
     gene            37412..39138
                     /locus_tag="R8X70_000250"
                     /pseudo
     CDS             37412..39138
                     /locus_tag="R8X70_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805434.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            39101..40474
                     /locus_tag="R8X70_000251"
     CDS             39101..40474
                     /locus_tag="R8X70_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEF2928070.1"
                     /translation="MMGKINQKMINNNTFSIIEHQAFSKEDLQGIFKEKAKKFYQELE
                     DFAKNNENFLGFKNKNTLTAKNYVGIIQTKSGVLEILPKCTNLDSYKDKECKLSTISK
                     EKLLKNYILNQISQAKTSENFYGEDFAFNPKTLLINMLKTLKNSPFKKSQISSLQISK
                     MPLLEVFIAMFLDELDGVYKKGLKKDYISIEENRNFLKGKLQFSQHLKQNLVHKERFF
                     TQSDEFMLDIAPNRLIKSTLNLLKSKTTHHKFKIIKALEMFDEVGFSTNYEKDFTYKI
                     SRHFDYYENLLSWCKIFLQNQTFAPYKGKNEAFALLFPMEKLFEDYVAHMLKKANPTQ
                     NIKTQSSGKYLISKKGEKCFMLKPDLYIENETILDTKWKIPDSNEDKKHGIAQSDLYQ
                     MFAYACKFKIHDIKLIYPLCERTMSLQNTIKELEFNANEHLAFLNDNSPLKTNIKVQV
                     IFTPLPF"
     gene            complement(40463..41269)
                     /locus_tag="R8X70_000252"
     CDS             complement(40463..41269)
                     /locus_tag="R8X70_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEF2928071.1"
                     /translation="MFEILNFTFFQNALLAAVLVSIACGVVGTLVMINRLFSIAGGIT
                     HGAFGGIGIAFYFSLPILISTGIFTLFLAFLVAFLSKRYEHRSDSIVAVIWAFGMAFG
                     IILIDLSPGYSTDLMAYLFGNILAVGMQDLWLMAIVDGVVIVLMLLFYRQFEALSFDV
                     EFAKVRGINTSFFHYLLIALMAFCIVISIRLVGIILIMALLSIPSFIAENFTKKLGLI
                     MILASVLSMIFCVLGLIISYYFNLSSGACIIAVACFGFLIHLLAKFLLKR"
     gene            complement(41262..42116)
                     /locus_tag="R8X70_000253"
     CDS             complement(41262..42116)
                     /locus_tag="R8X70_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEF2928072.1"
                     /translation="MLFFEISNLNYAYNNETILKNINLSYDSKDFLSIIGPNGAGKST
                     LVKLILGLLKTKKTISFHGIKKNEIGYVPQHTLANPNFCPRVIEIVLMGLVNKKIFGF
                     YSKKDKNKALEALASVGMQDFWDRKINELSGGQKQRVFIARALVDECKMLILDEPTAS
                     VDSKSAIQIFELLSSLHEKGIGILLICHDINLVLAYSDKIAYLNKELFLHTNTKEKDK
                     SVFLKHLYENHSHFCDVEMSLNSCFCDEENCEKKKICEQEFARRNLKKSNFKKENFCL
                     KFSKESHV"
     gene            complement(42129..42974)
                     /locus_tag="R8X70_000254"
     CDS             complement(42129..42974)
                     /locus_tag="R8X70_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004316639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEF2928073.1"
                     /translation="MFLLFIFLGLFNSFLCAKTLQPSENLNLPLISVSIAPQAFFVKK
                     IAGDTLNINILSTNTHKPKSKSNPMKKLEKSELYFTIGLEFEKKLTDKLEQKFPKVKI
                     IDMQKDIPLAKTSSSNSKEILDPFTWLDPILVQNIALNTYNALVQKYPQNKSLYKHNL
                     DKFLTELDVLNLQISSKLQKVKNKEFITYHPAWSYFAKRYDLVQNHIEFLGKKLKSKD
                     IKNLGALIKEKNIKVIFVQTRFPEKTAKTLEKEYNVKIYKIDYLSYDWENELLKTANA
                     FYENL"
BASE COUNT        15442 a         5887 c         7749 g        13901 t
ORIGIN      
        1 tatgcaaaga atagttgtaa aagtaggctc tcatgtgatc agcgatgaga atcttttaaa
       61 tttaaagcgc tttgagaatt tggtggcttt tttgaccaaa ttaatgcaaa aatatgaagt
      121 tattttagtt acttcagctg ctatttcagc aggatgtacc aagcttcata tagatagaaa
      181 aaatttaatt aataaacaag ttttagctgc gataggacaa ccttttttaa tcagcgttta
      241 taatgaattt ttagccaaat ttggcaaaat gggtggacaa attttgctta caggaaaaga
      301 ttttgattca agaaaggcga ctaagcatgc taaaaatgct attgatgcga tgattgattt
      361 aggaattttg cctattatta atgaaaatga tgccacagct attgaagaga ttgtttttgg
      421 tgataatgat agtttaagtg cctatgcgac gcattttttt gaagctgatt tgcttgtgat
      481 tttaagtgat attgacggtt tttatgataa aaatcctagt gaatttagcg atgcaaagcg
      541 tttggaaagg gttgaattta tcaaagaaga atggcttaat gtgagtgtta aaacaggaag
      601 cgagcacgga acaggcggta tagttactaa gctaaaagca gctaaatttt tattagaaaa
      661 tcataaaaaa atgtttttag caagtggttt tgatttaagt gttgcaaagg catttttgct
      721 agaaaataaa caaataggcg gaactttatt tgagtgatta taaattttta tttttcctta
      781 agttttgaag agtaaaataa attatgcgca taattcataa tattaagaag aaatgatgaa
      841 aaagtcagta aaaatacttc tttcagttgc tacttttgca tacgatcctt atacttgctc
      901 tttgcaaaat ttaattaatc caggtagctg caatcctaat ttagtgccta atgatgagta
      961 tgcttgctag gctttaccta atgttagagt aaatggcgag cctgtttgtg tggagtatta
     1021 ttaatgtcta ttttagtaaa tgctgtagat actttttatt ctactaaaaa tgaagctgta
     1081 ttttcagctt ctaaaagtga aaatataaaa agaaatgtcg cagattttaa tactgataat
     1141 aatacaaaaa attccgtgta tttttttagt gatgataaag aaatttcttt gaatttaagc
     1201 aatgaaagca tggaactttt gacaaatcat tttagcgcaa atgatttttt aaaactttct
     1261 aatggaaata taggcttaag cggaaaagca gccgcttttg tagaaggctg gtataaagat
     1321 attatgataa atagaaattt tttaaatgcc gatagggata aaaatggcag aatagaaaat
     1381 aacgagcatt tatctttaaa aaattcagta gaagatgtcg caaaaaatca agatttaagt
     1441 aagaattttg gggcagttgt tttaagaatg actcaaagta caacaggcta tgttgaaaat
     1501 acaattagcg ataaaagctt aagtatagaa gcacttatag atgaaagtat aaaaagtgat
     1561 agaaattttg atgggattat tacgaggctt gagtattctg ctaaaggcgg tacagatatg
     1621 caaggctata cgaattgggc tatagatgct ttaaatgata ttttagatga tagcgataaa
     1681 gccaaaaatt catttagttg tcgatcctac aagcaaaatt tggcattcgt atgcaggcaa
     1741 aacattaaat gaggttaagg cttactatga taatcctttt agagcgacga gtggaacttc
     1801 tgcttctggt tttttaaata tagtgattga agaaccaaga attttaccaa gtaatgattt
     1861 agaaaatgaa aaagagcaat tgcttaatga atttcctgaa tttagagctt tgatacaaaa
     1921 caatcccaat attacaaaag aaaaactttt aaaacttaaa aatcagcaaa gaatcacaca
     1981 caattatcaa gatcatcaaa aacaagattt gcaaaaagaa tttacacaaa atttctttaa
     2041 aacagatctt aaggcctaaa ttcccttaaa aaattcggca atttccgcat ttaaccttac
     2101 aaaattttta taaagattca ccccgttttg actggattga gttagcttta aaatcaaatt
     2161 tgttataatc aaaaccttga attttatata aagcgaaatg atgaaaaaaa ttatttttat
     2221 gggcacacca agctatgcaa cttgtatttt aaaagctctt ttagaagatg aaaattttga
     2281 gcttttagcg ctttttactc agcctgataa agctgtgggt agaaagcaga ttttaacacc
     2341 aagtgatact aaagcatttt tgcttcaaaa agctccacaa attcctattt ttaccccaaa
     2401 ttctttaaag gatgagagcg ttatagagca aatttgtgct ttaaagcctg attttatagt
     2461 agttgctgct tatggaaaaa ttttacctaa ggctatttta gatatagctc cttgtatcaa
     2521 tctacacgct tcgcttttgc ctaaataccg aggtgctagt ccaatacaaa gcgcgatttt
     2581 aaatgctgat gaaaaaagcg gggtttgcac gatgcttatg gaagaaggac tagatacagg
     2641 agctgtgctt gagagcgtag aatgcgatat aagagataaa aatgtaaatg aagtttttga
     2701 aattttagca aatttagcag caaagcttac tctttctact cttttaaatt atgaaaaact
     2761 ccttccaaaa aaacaagatg aaagcttagc tacacattgt aaaaagatca aaaaagaaga
     2821 tgggcttgtg agtttagata atgcaagaga aatttatcaa aaatatctag cttttacacc
     2881 ttggcccggg gtttttttag aaaatggttt gaaatttata gaacttgagc ttgtggatga
     2941 gttgaagcaa aatgccaaaa tgggcgaaat tttagaactt gaaaaggaaa gctttttact
     3001 tgcttgcaaa caaggaattt tacgcattaa aaaacttcaa gaaagtggaa aaaaagctct
     3061 tgatggcaga acttatttaa atggaaaaag gcttaaaagt gcagatagct tgtgttgaaa
     3121 gtattgattc tacccatctt tttttatgcg agcaaattcg cagtggcaaa atcaatgaaa
     3181 attttgccct ttatgcctta aatcagacaa agggtgtggg tagtagagaa aattcatggc
     3241 aaagttctag cggaaattta catctttctt tttgcattaa agaaggcgat ttgccaagcg
     3301 atttgccctt ggcttctgtg agtatttatt ttgcttattt gttaaaggaa attttacaag
     3361 aaaaaggttc tagaatttgg cttaaatggc ccaatgattt atatttagat gataaaaaag
     3421 tgggaggggt aataagcact aaaatttcag attttatagt gggcggcatg ggtttaaatt
     3481 taaaatttgc tccccatgat gcagctttgt gtgatgttga aattttgctt aaagatttga
     3541 tacaagagtt tttacaaaga ctagagaaaa aatttttatg gaagcatatt tttagcaagt
     3601 atatgttaga atttgaaaaa tcaagacaat ttagtgtcca ttatgaaggt aaggtatttt
     3661 cacttgaaaa tgctttttta tatgaggatg gatcaatttt actaggcgat aaaagggtgt
     3721 atagtttaag atgagtgaga ttattactat agcaaatcaa aaaggtggag taggtaaaac
     3781 tacaacagct gtgaatttag cggcatcttt ggcggtggct gaaaaaaaag ttcttttaat
     3841 tgatgtggat ccacaagcaa atgctacaac aggcttgggt tttaatcgca ataattatga
     3901 atataatatt tatcatgttt ttataggtag aaaaaaactt tctgatatta ttttaaaaac
     3961 agaattaccc caacttcatc tagctccttc aaatataggt cttgtaggca tagagcaaga
     4021 acttgcaaaa ggcgaaaata acgaaaaaaa aatgatactc aaaaaccaaa ttcaagaagt
     4081 acttgatgag tatgatttta ttatcatcga ttctccgccc gcacttggaa gtatcactat
     4141 caatgctttt gttgctagcg atagtgttat catacctata caatgcgagt tttatgcgct
     4201 tgaaggtgtg gcaatggttt taaatacgat taaaattatt aaaaaaacta tcaaccccaa
     4261 attaaaagtg cgaggatttt taccgactat gtatagctcg caaaataatc tttctaaaga
     4321 tgttgtagag gatttaaagc aaaattttaa aaagcaactt tttaccataa atggcaatga
     4381 agatgatttt attgttatcc ctcgtaatgt aaaactagct gaaagcccaa gctttggaaa
     4441 gcctatcata ctttatgata tcaaatctcc tggttctttg gcttatcaaa atttagcata
     4501 ttcgatttta ggataaaaca atgggtctta ataaaaatag aggtttgagc accttaatgg
     4561 gggatgtagg agaagtttat agtagagaac taggtcttga taaaaaccaa gtgagtcttg
     4621 tagaaatttc aaaaattact ccaaatcctt ttcagccaag aaaaactttt gatgaagcag
     4681 ctttaaatga acttgcaaat tctataaaag agcatggatt aatacaacct ataatcgtac
     4741 ttaaaaaaaa tgatagtttt atcttagtag ccggtgaaag aaggcttaga gctactcaaa
     4801 ttttaggcaa agaaaatata ctggcctttg tgtcagacag cgatgagagc aagcttagag
     4861 aattagcact catagaaaat atacaaagag agaatttaaa tcctatcgaa cttgcaaatt
     4921 cttacaaaga cttaatagag gtttataata tcactcaaga aaatttagcc gaacttatcc
     4981 ataaaagcag aacccaaatc acaaatactt taagactttt aaatttagat cctaaaactc
     5041 aagatctcat agcaagtggt aaaatttcac aaggacacgc taaggtttta gtaggcttag
     5101 ataaagaaga tgaaaaagta cttgtagaca gtattttggg gcaaaaactc agcgtaagag
     5161 acacggaaag acttgttcaa aaggttaaga ataaagaaaa cacagaagat gtagaatttg
     5221 aaaattctat gcaaagttta aaacagactt taaataaatt aggatttgca tctaaaaaca
     5281 ataaaaagga actcattatt cgtttggaca atattgaaaa aattaaaaaa ctgactgaaa
     5341 ttctcaataa attttaacaa agtattagtt tttatttgtt acaataaaag acttataata
     5401 ccccaaagga gatctatgtt tgaagatatg catccttcca taatgcttgc tactatggct
     5461 atttttttag ctatgatagt gattttaaac actatgctat acaggcccct tttgaaattt
     5521 atggatgaaa gaaatgattc tataaaaaac gacgaaaaca aagtcaaaga aaattcacaa
     5581 gaaatgttag gagcaaacga cgaggttgag gcaattcatg tgagtacaag agaagaaatc
     5641 cataaaatca aacaaaatgc catcaatgca gccaaagagg aagctcaaca agctataaaa
     5701 gctaaaaagg aagagttaga gcgtaaaatg gctaacttct atactgaatt agtatctcaa
     5761 aaaaaagaac ttcaagatca tttgtcagca cacttgcctg accttaaaca agctttgcaa
     5821 aataatatta aacagcacta attaaggaga aagatgaaaa agctatttta ctttattttt
     5881 ttactgcctt tatgtgcctt tggtgcatct aatggtagcg gagagtatga tattgttcca
     5941 agaacaataa atttcttaat ttttgtagct atattgtatt attttgtagc aaatcctttt
     6001 aaagcttttt ataaaaacag aattttaaga atttctttaa aattagacga aattcaaaag
     6061 aagcttttgg aaagcaaggc aaaaaaactt gacacaatga aaaagcttga agaagctaaa
     6121 gcaaatgcag cagcagcttt agttgtggca aaaaaagaag cagaggtgct tgctcaaaaa
     6181 attaaagaag aaactcaaaa tgagcttgct ttacttgaga agcattttga agagcaaaaa
     6241 gactatgaat ttagaaaaat ggaaaaagag gttgtgtctt taactcttaa agagattttt
     6301 gaagattcaa atattgcttt aaaacagaat gaaatcattg atattatgat gaagaaggtg
     6361 tcttaatgaa tgatctaata gctaaaagat acgcaaaagc tatagcctta agagaagata
     6421 tttcagaatt ttatgataat ttgtctattt taagttcagc ttttgcttcg cctaaattta
     6481 aaaatatcat agaatcaaat caaattcaaa aagaaaaaaa attagaattt gttatttctt
     6541 taatagaaaa agctagtcct agttttaaca actttttaaa actattagca gaaaattcaa
     6601 gactttcttg cattcctcaa attgctaaag agcttgaaag acaaaaatct tttaaagaaa
     6661 atattttttt agggactgtt tattctaaag aagtattaag cgaagataat atcaaagagc
     6721 ttgaaaatag acttagtgct aagtttggtg ttaaaattaa actacaaaat aaagtaggtt
     6781 taaatgaagg tgtgaaaatt tcactagaag aattaggtta tgaaatttct ttttcaatga
     6841 aagctcttca aaacaagatg agcgaatata tactcaaaat tatttaagga gaatgtgtaa
     6901 tgaaatttaa agctgatgaa atcagttcta tcataaaaga aagaatcgaa aattttgatt
     6961 taaatttaga gattgaagaa acaggaaaaa ttatttcagt agctgatggt gtggctaagg
     7021 tttatggtct taaaaatatt atggccggtg aaatggtaga atttgacaat ggcgataaag
     7081 gtatggcatt aaaccttgaa gaaagtagcg tgggtatagt tatacttgga aaaggagaag
     7141 gcttaaaaga aggtacttct gtaaaacgcc ttaaaaaact tcttaaagtt ccagtagggg
     7201 aagctcttat cggtcgtgtg gtgaatgcac ttggtgaacc aattgacgct aaaggtgtta
     7261 tcaatagtaa tgaatttaga tttgtagaag aaaaagctaa aggtatcatg gctagaaaaa
     7321 gtgtacatga acctttacat acagggatta aagctataga tgcattggtg ccaattggtc
     7381 gtggccaaag agagctcatc ataggcgata gacaaacagg taaaactact gtagctgtag
     7441 atactatcat ttctcaaaaa ggacaaggag ttgtttgtat ttatgtagcc ataggacaaa
     7501 agcaaagcac agtggctcaa gttgtaaaaa gacttgaaga gcatggagct atggattata
     7561 ctatagttgt aaatgcgggt gcttcggatc cagcagcact tcaataccta gcaccttata
     7621 caggtgtaac tatgggtgag ttttttagag ataatgcaaa acacgcttta attgtttatg
     7681 atgatttgag taagcatgct gtggcttatc gtgaaatgtc cttgatttta cgccgtcctc
     7741 caggtcgcga ggcttatcct ggtgatgttt tctatcttca ctcaagactt ttagaaagag
     7801 ctagtaaatt aaatgatgag ttaggtgcgg gttctttaac agctttacca atcatcgaaa
     7861 ctcaagcggg cgatgtttca gcttatattc caaccaatgt tatttcgatc actgatggac
     7921 aaattttctt agaaactgat ttatttaact caggaattcg tccagctatc aatgtgggtc
     7981 tatcggtttc tcgtgtgggt ggtgcggctc aaattaaagc aactaaacaa gtttcaggaa
     8041 ctctaagact tgatcttgca caatatagag aactccaagc ttttgctcaa tttgcaagtg
     8101 atttggatga ggcaagtaga aaacaacttg aacgcggaca aagaatggtt gagttattaa
     8161 aacaacctcc ttattctcca cttagtgttg aaaaacaagt ggttttaatt tttgcgggaa
     8221 caaaaggtta tttggatgat gtagctgttt caaaaatcag agaatttgaa gatggaattt
     8281 atccatttat agaagcaaaa tatccagatc tttttgagca aattcgttcg aaaaaagctt
     8341 tagatgcaga gttagaagag aaattagcta aagcaataaa cgagtttaaa gcaaaccatt
     8401 tataaggttc ttttatgtct aatttaaaag aaattaaaag aaaaataaaa agcgtccata
     8461 atacgcaaaa aacaaccaat gcgatgaagc ttgtttctac tgccaaatta aaaaaggcag
     8521 aagaagcagc aaaaagatct agagtttatg cgcaaaaaat cgatgagatt ttaagtgaaa
     8581 tttcttttca agtcaataag attgttcaca atgaagagga ttcaagattt gttttatttc
     8641 ataagaaaaa tcaaatcaaa aatgtagatc tgatctttat aacagcagat aaaggacttt
     8701 gtggcggttt taatatcaaa accctaaagg ctgtaagtga acttttaaaa gaatatgaag
     8761 aaaaaaatat caatgttcgc ttaagagcta ttggaaaaac aggaattgag tattttaatt
     8821 ttcaaaaaat agagctttta gaaaaatatc ttggcttgag ctcaagtcct gattatgata
     8881 aagcttgctc tgttattcaa gctgctgtag atgattattt aaatggaata actgatgaag
     8941 ttgttctagt gcataatgga tataaaaata tgatcacaca agaattaaaa atttctcatc
     9001 taatcccagt agagccaaag caaatcgaag gaaactcgaa ttcgctttta gaacttgaac
     9061 ctgaagatac agatctcttg ggagatttga tgaaaacata ttttgaatac aatatgtatt
     9121 atgcattaat tgattctttg gctgcagaac atagtgcgag aatgcaggct atggataatg
     9181 ccaccaataa tgcaaaagct agggttaaac agcttaattt agcttacaat aaagcaagac
     9241 aagaatctat cactactgaa cttattgaaa ttatcagtgg tgttgagtca atgaaatagt
     9301 aaaattttta aggagagtat aaataatgca aggatttatt tcacaagtat taggtccagt
     9361 tgttgatgta gattttaacg actatttgcc tcaaattaat gaagccattg ttgtaaattt
     9421 tgaaagtgaa ggcaaaaaac aaaaacttgt tttagaagta gcagcacact tgggcgataa
     9481 tagagttaga actattgcta tggatatgac agatggcttg gtaagaggac ttaaagcaga
     9541 agctttgggt gctcctatta gcgttcctgt gggtgaaaaa gttttaggaa gaatttttaa
     9601 tgttacggga gaattgatcg atgaaggtga agaaatttct tttgataaaa aatgggcaat
     9661 tcatagagat ccaccagttt ttgaagatca aagcacaaaa agtgagattt ttgaaacagg
     9721 gattaaagtt gtggatttac ttgctcctta tgcaaaaggt ggtaaagtag gtctttttgg
     9781 tggtgcaggt gttggtaaaa ctgttattat tatggagctt attcacaatg ttgcatttaa
     9841 acatagcggc tattctgtat ttgcaggtgt aggtgagaga actcgtgaag gaaatgacct
     9901 ttataatgaa atgaaagaaa gtaatgtttt agacaaagtt gctctatgtt atggacaaat
     9961 gaatgaacca ccaggggcaa gaaatcgtat tgctttaaca ggtttaacaa tggctgagta
    10021 ttttagagat gaaatgggtc ttgatgtgct tatgtttatt gataatatct ttagattttc
    10081 acaatcaggt tctgaaatgt cagcactttt aggaagaatt ccatcagctg tgggttatca
    10141 accaacccta gcaagtgaaa tgggtaaatt ccaagaaaga attacttcaa ctaaaaaagg
    10201 atcaattact tcagttcaag cagtttatgt tccagcagat gacttaacag acccagctcc
    10261 agcaactgtt tttgctcact tagatgctac aactgtttta aatagatcta ttgctgaaaa
    10321 aggtatttat cctgcggttg atccacttga ctcaacttca agaatgcttg atcctcaaat
    10381 tattggcgaa gagcactata aagttgcgcg tggtgttcaa tctgtacttc aaaaatataa
    10441 agatttgcaa gatatcattg caattttggg tatggatgaa ttaagcgaag aagataaatt
    10501 gatcgttgaa agagcaagaa aaattgaaaa attcttatca caaccattct tcgttgcaga
    10561 agtatttacg ggtagccctg gaaaatatat ttctcttgag gaaaccattg caggctttaa
    10621 gggaatttta gaaggtaaat acgatcactt accagaaaat gctttctata tggtgggtaa
    10681 tattgacgaa gctattgcaa aagcagataa actgaaaggt taatttatgg acaatttaat
    10741 cagttttgaa atagttacac ctatgggtgt gatttatcaa ggggaggtaa aatcagttac
    10801 cttgccagga agtgaaggag aatttggagt acttaaagga catgctgctt tagtttcatc
    10861 tttaaaatct ggtgtaattg atatagaaaa agctgattta aatcatgaat taatcgcaat
    10921 tgatgcaggt catgctaagg tagatgaaga taagatcagt gttttggcta agggcgcggt
    10981 ttggatttca ggttctagcg aaagcgaaat cgaaaaaaat cttgaaagcg ctaaagaatt
    11041 aatcaaatct atgagttcag acaatacagc tttagctgct accttttcaa agcttgacaa
    11101 tgcaaaggtt aggtagatga attttgaagc gatatttcag ttttttggaa gttcaagcat
    11161 aattacttat atagtcttag cttggctttc cttatatttt atactttctt tttttatact
    11221 tttttcaaga gtgacttatt tggcagcttg gaaaaataaa gaaaaagaaa gtttagaagc
    11281 tctactcttg ggagaaaaag atttgagtag aacgcgttct attttaagaa agtgcacaga
    11341 tactagttta tcacatcttg agatttacaa aaatttagca agtcgtcgcg catccaatgg
    11401 gcttacttgg cttagtatag tagcttcaac ctctccattt ataggacttt ttgggactgt
    11461 tatttctata cttgagactt ttggtggttt agggacgcaa aattctttaa gtattattgc
    11521 acctaagatc agtgaagctt tagttgccac aggctgtggt attttggttg ctattcctgc
    11581 ttatactttt catcttatta ttaaaagaaa ggcttttgag ctcttaagta taattgatag
    11641 tgagattaaa gttattagtt ctaacaaata ggatttaaga tatgccattt gacgatgaga
    11701 agccagagct taatataact cctttggttg atatcatgct tgttttattg gctattttaa
    11761 tggtaacagc tccaagcatt acttatgaag aaaaaatcaa tcttcctcaa ggaagtcaaa
    11821 aatccacaag tgctcctagt gttaaaagct taattgttag tattaatgct aaaaaagaga
    11881 tatttttaaa tcaagaaaaa tatagttttg taagctttgc agataatctt gcgcaaaaaa
    11941 aagcacaatt taataccgac gaaccggtat ttattagggc tgataagagt ttaaaatacg
    12001 atgatgttat ttttgtttta aaaagtatta aaaatttggg ctttaataaa gtcgccttgc
    12061 aaacagaata agctatgaaa gaatatggtc taggcaagat aaattcattt ttgcttgctg
    12121 tcgcggttta tgtttttatt ataattctta ttttttttag actcgtagcc cacatacaac
    12181 ctgcaatcca atatacggat attcaagata gttttatcga catagagctt atggaaccct
    12241 caaaaaaagt cgtaaatgag caaagcgctc ctaaagatat tcaaaaacct gcccaagagc
    12301 ttgatattga aaaacttttt gcacaaacta caaacaaagc agtaaaaact gaagatgtgg
    12361 atcaaaaagc cagcaatttt aatgagcttt ttggtagtat caaagagata caagaggaaa
    12421 aaactactaa aatacaatca agcgctaaat cagaaacaac aagcagttca aaaactcaag
    12481 cttcagagct tgtaaagcaa ttaaacgata gcttacttga agaagaaagt atcaatcaag
    12541 gcgaaagtat taaaaatcaa aagacaggga tttatgatga gtttttggga aaggtggtgc
    12601 gcaccatcgc ccaaagatgg agacaatatc atcctaatag tgaaaatatt tcagtcaagg
    12661 taaaaatttt tattgatgaa aatggaaatt ttggctatac ttcagtcgaa aaaagcggaa
    12721 attctttata cgacgcaaaa gtagccgaat ttttagaaaa ccaaaaaggt aaatttatag
    12781 cctatccacc tcaaaataaa agcataagta ttactatgaa tttaaaagat gaggcgcaaa
    12841 ttcaaaaata attgaggagt aaaaatgaaa aaaattgtaa cagtattttt aattttttta
    12901 ggaatacttt gggcagaaga tcctgtgatt gatgtcgtaa attcaggcgt agtcttacca
    12961 aaaatcattg ttaaagacaa ttcgaattta agtgatatta atttaaagcg tagtttttat
    13021 aatatcattg taaatgactt gaaagtaagt tcaaattttg aagttgtaag tgatgcaagt
    13081 tcagaagctg caaattacac ttttgaatac gatttgagta aaaatggcaa tgctttaaat
    13141 ttgcatgtta agatcaaagc aggaggcttg gaaaaatcaa gtcaaaccta tgctttaaat
    13201 ggtgtagagc agtatccttt tttggcccac aaaagcgtaa aagcttcggt aaatgcatta
    13261 ggacttgctc ctgttgaatg gatggatcat aaaattttaa ttgccagaaa ttcaagctct
    13321 aaaaaaagtc aaattatcat ggccgattat actttaacat atcaaaaagt aatcattgat
    13381 ggaggattga atttatttcc taaatgggga aataaagagc aaagtatttt ttactatacc
    13441 gcatacgatc atgatagacc aacgctttat cgctatgact taagaactaa taaagcaagt
    13501 aaaattttag caagtggagg tatggttgta gcaagcgatg taagcttaga tggtagtaag
    13561 ttacttgtga ctatggctcc aaaagatcaa cctgatgttt atttgtatga tttaaattct
    13621 aaaaatttaa ctcaacttac gaattattca ggcatagatg taaatggaaa ctttataggc
    13681 gtagatgata gtaaatttgt ttttgttagc gatcgcttgg gttatcctaa tatttttata
    13741 caaaatctca ataatggatc tgccgaacaa gcagtttttc atggtaaaaa taattctgca
    13801 gtttcaacct ataaagattt tttagtatat tctagtcgtg agccaaatca agtaggtgtt
    13861 tttaatattt atttaatgtc aatcaatagc acaggtattc gtcaatttac cgcaaacgga
    13921 aagaatttat ttcctagatt ttcaagtgat ggcggtagta tagtttttat caaatatctc
    13981 ggagcacaga gtgctttagg tgttattcgt gttaatgcaa acaagacttt ttattttcca
    14041 ttaaaagttg ggaaaattca gtctattgat tggtaaaaat ttgtaatttt tggttaaatt
    14101 taattaattt tagatataat gctaacaatt tattaacttt gaaaggtcat aaatgaaaaa
    14161 aattcttttt agttctattg cagcatttgc attggttatc agtggttgta gcacaaaaag
    14221 cactagcgta agtggtgata caagtgtaga ttcgaatcgt ggaacaggtg gtagtgatgg
    14281 ttgggatatt gattcaaaaa tttctcaact taatgatact ttaggaaaag tatattttga
    14341 ttttgataaa tttaatatcc gcccagatat gcaaaatgtt gttaatacaa atgctaatat
    14401 cttcaacaat gaagtaagcg gtgtaagcat tactgttgaa ggtaattgcg atgagtgggg
    14461 aacagatgag tataatcaag ctttaggttt aaaaagagca aaagcagtta aagaagcttt
    14521 aattgctcaa ggtgtaaatt ctgacagaat tgctgttaaa agctatggtg aaacaaatcc
    14581 agtatgcaca gaaaaaacaa aagcttgcga tgctcaaaat cgtcgtgcag aatttaaact
    14641 atcaagataa ttgatgaaaa aaatattctc agtagctctt atcggagcta ctttacttta
    14701 tgcagaaagc tctgcttttg gtgcaggaga tttaaccagt aattccccct atggtttaac
    14761 atcaagtgaa aaattactca aggaaaaatt agatacttta agcaataata atgttcaagc
    14821 aaattctaga attaatgaga ttgaacaaag agtcgaagga ttgcaaagta ctttagaggg
    14881 tataaattcg cagtatgcca aatccaattc tagattaacg caacttgaaa cccgttttga
    14941 agctatggaa aataatttaa gcacagaact tcaaaattta aaagcttatg ttgaagaaag
    15001 tagaaaaatt caagatgcta acaataagca aattaagaaa attttaaccg aattaagttc
    15061 tttggttgat tctattaacg caaattatgt gtctaaagat gacttaaata gtacgaattt
    15121 aagtatcaaa aatacagttg ttgtacctct atcgatcgat gataaaaaca taacttctag
    15181 cgatgaaaac aatgccagtg ttgctccagt gcaagaaaaa gaagttaaac aaatagatga
    15241 ttcttggaaa aagaaaaaaa ataacgaaat tttagacttg gctatcaaag atttaaataa
    15301 taattcttat gagaatagca aaattaagtt aaactatctc atatcaaaac aatacaaacc
    15361 tgcaagggca aatttttggt taggagaaat tgagtataag caaaagaaat acaataatgc
    15421 tattgcttat tataaaaaaa gttctgcttt gagcaccaaa ggggattatt ttccaaagct
    15481 tttatatcac acagcgattt ctcttgataa gataggagat ccaaaaacag ctaatgggtt
    15541 ttataaggct ttaaagacaa attatcctaa ttcaccggaa gcaaaagctt cccccaatag
    15601 aaaataatat caaggagaaa aaatggctat agaaaaaaat agcgtagttt caatgtttta
    15661 tgaattaaaa gatgcaaata caaatgaagt tttagaatca aatttatatg ctcaaccgat
    15721 ttcttttatc ttaggcaaag ggcaaatttt agaagcttta gaagaagaag tgatgaagct
    15781 tgattgccct agcaatgctg atgtcgtgat taaaaaagat aaaggcttgg gcgaatacga
    15841 tgaaaatgca gtgcaagttt taccaaaaga gcaatttgca ggcattgatt taaaaatagg
    15901 tatggagctt tttggcgagg gtgaaaacgg agaaaccgtt cgcgtaactg ttaaagaaat
    15961 cagcgataat gatgtaacta ttgattacaa tcatccttat gcaggtcgtg atttgctttt
    16021 ttctttaaat atagtagatg ccagagcagc aagtgaagat gagcttctta caggcattat
    16081 agcaggaagc catagttgtg gttgtggaag cggacatggg catggacatg atcatcacgg
    16141 gcatggcggt ggcggatgct gcggtggcgg tggcggcgga tgtggttgcc actaagatga
    16201 atgctgtatt tatttttcca ggtcaaggct ctcaaagtct tggcatgggt aaagattttt
    16261 atgaaaactc caaaaccgca aaagaacttc tagaaaatgc cagcgatttt tgtaaaattg
    16321 attttaaaaa tttattgttt aacgaaaatg atgatttaaa caaaagtgaa tttacacaac
    16381 ctgctatact cttaaattct ttaatggctt atagtgcttt gagtgaatta aaacctgata
    16441 ttaaggttaa atttgctttg ggtcattcct tgggtgaatt ttcagctttg gcgatcaatg
    16501 gtgcttttag ctttttagaa gcaactatgc ttgtgcataa aagaggactt tttatgcaag
    16561 aagattgtgc aaaagttgaa gcgggtatga tggtaatttt agggcttgat gataaaaaag
    16621 tggaagagct ttgtcaaaaa gctagagatg aggataaaaa aatttttgca gctaattata
    16681 actgcgatgg gcaaatcgtt gttgcaggtt taaaacctga tttagcaagc tatgaaagtg
    16741 tatttaaaga agcaggcgct aaaagagcta tgcttttaaa tatgagcgtg gcaagccatt
    16801 gtccgctttt agaaaacgcg tctaataaac tttgcataga gcttgaaaaa atactagagc
    16861 ctacttttaa agctgtaatt tctaatgcta cagctaaagc ttatacgagc aaacaagaag
    16921 ctcttgagct ttcaaaaacc caacttgtag ctcctgtgct ttataaacaa agcattaagg
    16981 cttgtgaaaa tgaagcagat tgttttatag aatttggcgc tagtgtgctt aaaggtttga
    17041 ataaaaaaat cacttcaaaa gaaacttatg ctttaacaaa tatgaatgat atagaagaat
    17101 ttttaaaggt aatataaatg aaaatagcaa ttttaggtgc aatgagtgaa gaaatcactc
    17161 ctttgcttga aacacttaaa gattatacaa aaatagaaca cgctaataat acttattatt
    17221 ttgcaaacta taaaaatcat gagcttattc ttgcttattc taagataggc aaggtaaatt
    17281 ctaccctaag tgctagtgtg atgatagaaa aatttggcgc gcaagtttta ctttttacag
    17341 gtgttgcagg agcgtttaat cctgagcttg agattggtga cttgctttat gcaacaaaat
    17401 tagctcaata tgatcttgat atcactgctt ttggacatcc tttgggtttt gttccaggaa
    17461 atgaaatttt tataaagaca gacgataaat taaacaatct tgctttagaa gtcgcaaaag
    17521 aattaaatat caaacttcgt gcaggtatta ttgcaacggg tgatgagttt atttgcgatg
    17581 aagcaaaaaa agcaaaaatt agagaaattt tcaatgcgga tgcttgtgaa atggaaggcg
    17641 caagtgtggc tttggtttgt gatgctttaa aggtgccttg ttttatctta agagctatga
    17701 gtgataaagc cggcgaaaag gctgaatttg attttgatga gtttgtgatc aattcagcta
    17761 aaatttcagc caattttgta cttaaaatgt gtgagaaatt atgataaatc ttagcaaaaa
    17821 actcatacgc caagttgcac aagctaatgc taaatttgga cttattaaag atggagatag
    17881 ggttctttta gggcttagcg gcgggaaaga ttctttggct ttagcccatc ttttaaatcg
    17941 tatgcaagct cacgctcctt ttaaatttga atttgaagcg gtaactttga gttatggtat
    18001 gggcgaggat tattcagggc ttcatgcaca ttgtgaagaa cacggcatta aacatagcgt
    18061 gcttgattca aatatttatg aagtttcagg cgataccata agagaaaatt caagtttttg
    18121 tagttatttt tcgagaatgc gtcgtggagc tttatatact tacgctcttg aaaaaggttt
    18181 taacaagctt gctatagccc atcatttaga tgatgcagca gaaagctttt ttatgaattt
    18241 tattcataat ggagctttaa gaaccttagt gcctatttat caaagcaaac gcggtataac
    18301 tgtgatacgc cctttgattt ttgtgcgtga aagacagctt agagataatg ctacgcaaaa
    18361 tgaacttagc gtgataggaa atgaattttg tcctggtatg aaactcagtg aaaaaaatgt
    18421 aaaatttcca cacgctagag aagaagctaa acagctttta gcaaatttag aaaaagatca
    18481 tcctaagctt tttacaagtt taaaaaccgc ttttgccaat ttacacacgg agagtttttg
    18541 gcttcaaaag gcataaaagc atgaaaaaag cttttgtttt agtggattat caaaatgatt
    18601 ttattgatgg aagtttaggt tttgataagg ctttaaagat caaagaaaat attcttaaag
    18661 ccttaaatca aatcgatttt aataacacgc atttgctttt aacctatgat acgcatgatg
    18721 agcattatct acaaagtaaa gaaggtttaa atttacctgt aaaacattgc attaaagaga
    18781 gtttgggttg gcaaatgcca aaggaatttg aacctttttt acaaaaagct cataaaattt
    18841 tttataaaaa tacttttggt agcttagaat tagctaattt catacaaaaa agtgattatg
    18901 aagaacttca ttttgcaggg cttgtttctc atatttgtgt gttttgtaat atcattttag
    18961 cttttggtgc taagcctaat gcaaggataa ttttacacca aaatttaagt gcaagttttg
    19021 ataaaaattt agaaaaatct gcttttgatc tacttagagc ttatggtatt gaaattgttt
    19081 aatgcaaggc tttatactcc atactcaaaa agttaaagat gaggatttga tcgtttatat
    19141 tttaagtcct aaaatgctta ttaaggttta tcgtttttat ggacttagac attctagtat
    19201 tttaagcggt tataaaatcg attttgcttt agaagaaaat cctagttttt tgccaagact
    19261 taaagatgtg ttgcatttag gatttttatg gatcatgcaa agggataaaa tgcttatttg
    19321 gcaagaattt atccgtcttt tatatagaca cttaaaagat gtagaagagc ttgatagttt
    19381 ttattttgat ttacttcaag agtgtgtgaa aagatttgaa aaacaaaatc caaagcgtgt
    19441 cattgtcgat gcttatttaa aaattttgga atttgaagga agattgcata aagatttttt
    19501 ttgttttgcc tgtgatgaga aaattcaaaa ttccattaca ctgttaaggg cttttttacc
    19561 ttcgcattct caatgcgctt taggatttga gtttgaagag aaaaaactaa aacaatttta
    19621 tagcagtaaa aattgtgcga tttttgatga tgaagaaata gaaaatttat accatttgat
    19681 taaggaaggt ttatgatatt aagtgatgaa aaatgtgatt ttttagaacc tatagcaagt
    19741 tttttaagct ctaagcatgt ggagcttgtt tttgtagaaa gtaaggaaat gcaagaaatt
    19801 aacttagagc aaagaaagca agataaaacc actgacgtgc tttcttttcc gcttgaaaat
    19861 atcgatgaga gtttgccttt gggttctgtt gtgatcaatg tggatttggc aaaagaaaag
    19921 gctaaagaat tagggcatag ctatgaagaa gaaataagct tgctttttat acatgctatg
    19981 cttcatttac taggctttga tcatgaaaat gataatggag aaatgagaga aaaagagaaa
    20041 gaacttatag agcattttaa tttgcccaaa agtttgattg taaggacttt agaaggttga
    20101 actaaaataa taatttcggc gtccaaatca tagaaattgg ctctaaaaag aaggattaga
    20161 ataattaaga taaaaagttt agctctctaa tcaaaaataa taaatataga tttaaataaa
    20221 attaaaatca aaacaaacta aaagggctga aatcaaaatg taaagatttt ggagtattta
    20281 cttgaaaggt cttagttctt ttttaattaa agaataacca cctttattat atctatccaa
    20341 ataaaaaaaa ttgattttaa tatataattt atgatattat tcaaataaag agtaaaatag
    20401 ttaagaaaag gagaattata tgttaaaaaa attaacaagc tcattgattt taggctcttt
    20461 attggcaagt tctgcttttg ctggggattt tttagctaaa gttagtaatg gtgctttaag
    20521 tgataattct caaggggtta aagctcttaa tttagatgag atgaagcaag ttaagggtgg
    20581 agctatttct caagatggta ggatagcacc tcttttagtt tatggtggca gacaacttgc
    20641 gatgtggggt ataagatacg cagcttgggg tgcatatcaa gaaagacatc ctataaatag
    20701 tggtattgga attcatggtt ggcgtccata agcttatgtt agaaaatctt tttgctcaaa
    20761 taatagaaaa ttttatttac tgcaaggata agggttattt ttgcctcatt tttcttatta
    20821 ttggtgcttt tattttgttt tttatttttt caaagcttta tggatatttt taggagcaaa
    20881 tttaaatctt taattatgaa tttttccaca ctagaacttt gcataaatat tttgataatc
    20941 ttgctttttc tctatgtttt atgcaaccgt ttttttatga gcaaaatagg atttttcttt
    21001 tttataattt tatatttatt gctacatttt gtgaatatcg aaaatatatt tttgtggcta
    21061 tttttttctt taacctattg cattatttta ttcatagtgg ttttaaaaat atatcacaaa
    21121 aagaaacaaa ataaatatta agctactggg ttactttgcc gatatgattt gcaaggaata
    21181 aaaatgataa atagtctaaa ctcaaattta aactatgatt acaacacttc aaattttaaa
    21241 caagataaaa atattgactt taaaatcaac aaacacggag tagccgttat aacaggagaa
    21301 ggtgctttgc cttatcgtgg aaaaaaattt gagtataatc ccaaaatatt cggacttgat
    21361 gaaagtatta gcaaaaaaga tatgcaagaa tttaacaact ttatgaagtc aaatgcttta
    21421 aaagacccca ataaaataga aaaatctcct ttaaaagatt ttaatcctgc ttatacaaaa
    21481 tgggacccaa ctacggagaa aatgatgtta ggtttttttg tttcttattc taagatgttt
    21541 catttgggct acgacatcat caaaaaagcc gatgaatttt ataaagaatt tgacgcactt
    21601 ataagtaaag atttaagctt agatgagttt aaaactaaat acatagattt taagcaaaga
    21661 cacgatgaat ttgtgaaaga atacgaaatg actatgggcg ataaaatgtt gctttctagt
    21721 gataatgaaa ttatcactca acaaagtgaa aaacccttca aagccattca aggcgaaagc
    21781 aaaaacaaag aaacttacaa agatgatagt acaagaaacg aacttgtaaa aaaactatta
    21841 gaaggtaaat ttagcactag tgaagaatta gaacttcttt ttggtatgaa atttagtgat
    21901 gatgcaggag aatttaataa aatcctttct ttaaattctg caccaaaaat tatagatatt
    21961 aaggcttaag attttttaaa ttataaaaat caatcaagtt aaactaaaaa attcttctat
    22021 tttttttcgc atttcttcga cattgtcgat acgattaacg ctatctctaa aggctgaagc
    22081 gtctttatgc cctttagaat actcgtgtaa atgcttgcga aatatactta tgccttgatc
    22141 tttgtagtgt tttatcattt catcaaaatg agtgagtatg atttcttttt tgaatttttc
    22201 atctacactt ttaccacttt tgatttcatg aaatatccaa ggatttccta cgcttgcacg
    22261 ccctatcatg agtccatcgc attttgtgat tttataaact tctttagcgt tttgtgcgtt
    22321 gatatcgcca tttgcaatca caggaatttt cacgctcgct ttagcgctgg caatggattc
    22381 ataatcggct tttccgctat aaagctgttt tcttgtgcgt ccatgaatac ttacaaaatc
    22441 cacccccaag ctttcacaaa ttttagccat tttttcagga tatttttcat taaatcctag
    22501 tcgaaatttc acacttgtaa ggcttttttt attgttttct ttaatcactc ctacaagatt
    22561 tttaaaaagc tctaaatttt ctagcaaagc acttcctgca cattgtttaa caactttatt
    22621 gacagggcaa ccgcaattaa aatcgatccc atctacaaaa tccatttcat ttagcatttg
    22681 tactgctttt tttagcactt ctttatctcc acctgcaatt tggactatat aagggttttc
    22741 aagttcagct ctttctagca tatgtagagt tttagaactt tcataaacta aggcattaga
    22801 acttatcatt tcacttatgg taatatcagc accaaatttt tttaccacat tgcgaaaagg
    22861 cagatctgaa aaacctgcca taggggctaa aaacaagggt tttttgctaa aatctatcat
    22921 tgtatgagtt ggtttagatc gattttgata tttttttcac gcagggttaa aaaggcttta
    22981 aaatcattaa atttcttatc atcattgtga atttgctctc ttagctcatc taaaagtcca
    23041 aattcagcta aaagatataa atacgctctt aaagcttcac ttttttcatt tttaatttta
    23101 ttgaaaattc ctaaaatagc atcaggattt aaaagtttga tacttagttt tgctgcgtta
    23161 agatagtctt tttcgcttag tatattgtgt gaaagtaaaa cttcatattc tgctacacta
    23221 agttctaaat ttccttcttt aaaacgcttg atgagtgtaa ggatatgaca aggttttttt
    23281 gtgattttga tatttttaat ttgctcataa gttccttttt ttatcaaact ttcaaaagcc
    23341 agatcttgga attcgtcttg agtttgacta aggtttttga ttttggaata agcataattt
    23401 atatcatttt tgatatgatt tttttcattt tctagaaata agatattatt attttcgagt
    23461 ttaaatttgt taagattgaa gtattcttct tttttaatac cgtctataag atctaaaatt
    23521 tcattgattt tatttgcatt agggattttt tcatgtgttt ttagggtttt agctagctgt
    23581 gctacttgtc taaattcctt tgtttgaaag ctgatatttg attctttttc caaaagaagg
    23641 tcgcgggtaa aattttcaaa tttggtagaa tctttgaaaa aatgcttaaa ttttaaagtg
    23701 agtaaaaaat aataaaaacc catatgaatg atggcaaaaa acactaaagg tatcaaaggt
    23761 aaaataagcc atatcattat aggtagctcg aagctatatg tattgaaatt taaagtataa
    23821 tttcctaatt ctaaatacca agcaagagca aatataagag ctatataaat aaagcttgct
    23881 ataaaaaata atctaatttt cataactctc ctttttctaa attttcgcgg catacgatgc
    23941 agtattttgc atgaggtttg attttaagtc tttctatggc gatttcttca tcgcaagatt
    24001 cgcatattcc ataagtgcca tctttgattt tttctaaaga atcttctatt tcttctaatt
    24061 cttgttttaa attagcactg atagcaaaat caatttgcga tcctgtttca ataacagaaa
    24121 aatccacact atcacttggg acgctattat gtaaggcttc aatttcttta gaattgcttt
    24181 gcaaattttc caatatagtt ttttttctat tttctaagat agttttaaaa acttgtattt
    24241 cattcttttt cattgtttaa ccttttattt gtgataagga tgatttgagt tgatacaaaa
    24301 agcacgataa atttgttcta aaagtaaaat ttttacaaat tgatgtgcta aggtgagttt
    24361 gcttaatgaa agtctaaaat ctaaactctg gctgaattca tcccttaggc cataagcacc
    24421 acctataaaa aaatttaaat tatttttatc tgctatgagt tttgcaaatt ctacgcttgt
    24481 aagctccttg cctctttcat caagaactat gcaaaagcct tttgtataag gagcaaatgc
    24541 ctcttcatag cttaatttag cagcttgtgc atttaaattt tgcgccgcag ctattttttt
    24601 attaaagaga ttgtgttctt taagatctgc aaatttggag ataagttttg cgtacttctc
    24661 accccaaatt ttaaattcat cgtttttttg tatgtgaaaa atattaactt gcaagttatt
    24721 ttccacaaaa gaatttaaga gtatcgctaa ggtatttttt catatctgaa cgctctacta
    24781 ttgcatctat gagtccatgt tcgagtagaa attcagcttt ttggaagcct tcgggtaaat
    24841 ctgcacctat ggtttgttta atcactcttg ctcctgcaaa acccaccaaa gcgcctggtt
    24901 cagcgatgat taaatctcca agccaagcga aagaagcgct cacgcctccc atagtaggat
    24961 cggttaatac gctgatataa gggagttttt ctttgcttaa aagttttaaa gcagcgcttg
    25021 ttttactcat ttgcatcaaa gaataagtac tttcttgcat tctagctcca ccgcttgcac
    25081 ttacgataac aacaggagtt ttatctgtga tagctctttg gattgcccta acgatttttt
    25141 cgccttctac agagcctaaa gatcctccca tgaaagaaaa atcaaacacc acaagctgaa
    25201 ttttaagtcc atctataaga cattctccgc taatgactgc agactttcta ccggttttgc
    25261 tttcgccttc gctcaagcgt tttttataag acttgctgtc aacaaatttg agcggatcta
    25321 tggcttctaa atttgcatca tactcaacaa aggtattttc atcacttaaa agcttgattc
    25381 tatccatagg agaaattctc atatgataag agcatttagg gcatacatta aaacaagatt
    25441 ctatttcttt ataatacatt aaagcatggc aactctggca ttttacccaa tgatttggag
    25501 cctctttggt gctaggttgt tgtcttctga tttttgaaaa aatatctgca aaattcataa
    25561 taattcacct aattatttta aaaattccaa gattatatca aaaattttct tatctttact
    25621 tatgagaagg aaattttcat tgttttctat atataaattt ttacacaaca tcaaagctcc
    25681 tgcagtatca aagattcgag tttttcctaa aactaaaaca aagctaaaat atggagcata
    25741 agcaatgctt aaagctgtag cgcccaaaga gcgaaattta agcttatttt gtgcaaggtg
    25801 attgataaga cttgggcaaa gcgttatttt ttctacgatt ccaatttgag aaaaatgatt
    25861 aggcaaaaaa ggagaatagt taggattgaa aagatttgat tttaaatttt tattatcatc
    25921 aaaaattaaa atttcatgat ttgctagatt gcaaataaaa gcactttgag cttcttcatc
    25981 tttaaaaagt gctgcagatg ttccataaaa gggtatttta gaaacaaaat ttgaacttcc
    26041 atctaaggga tcaagaatga ttttataagg actattttct ccgatcaagc cactttcttc
    26101 ggaaaaaatt tgacctaggt tgcaaaggtg ctctataaag attttttcac attttagatc
    26161 aagcttatag ctttgattat tatcaaagcc aagttcggga caaaagctaa gatcgctttc
    26221 gcaaatattg ttaagatact cgctaatttg caaatttgct tttaggcaag catctagaaa
    26281 ttgtttcatt aaaagcgtgt tcctaggtta aattcaaaag tattggtatc atcacctttt
    26341 ttatcgttga gtggtttagc aaatacaagt tgcaatggcc caataggagt gatccattct
    26401 atacctaaac ctgtactcat tctttgaatt tcatcaagat ttttatttcc tatcatccca
    26461 taatcaaaaa atacactacc gcgaagttta attctatcga ttaaaggaaa gctaagctct
    26521 acagaatttg caaaagctat agttccaccc acttcatctc cccattcatt tttagggctt
    26581 acagttctac tttcaaaacc gcgaagagag cgaataccac ctaaatagat tctttgattg
    26641 attggaagat agccttcatc ccaaacttta taaaaacttg ctttataacg ataaataaga
    26701 tcataaccta tataatcttg caaaccttga taaaagttaa attttgaact cgatgaaagg
    26761 aattcttgat ctcctccaag tcctgcatat tctaagcttg ttgaagcgat aatacctttt
    26821 cttgggagat aataatcatc agtgttgtta aaagtaatag caggagtgat agagcttttt
    26881 atagttttgc caagctcata acctgttctt aaaagtgttg gacttagatg atagatatca
    26941 ctttgctcaa gattgtaagt taaacttaca ttataatatc ttgcaaattg acgacctagg
    27001 gtgatatcaa aaccgtaatt tttttcagag taattatccc attcataatc attagaataa
    27061 agcgttccgc ccaagctgta ttgactatca agaatgcgtg gatttataag actgattctc
    27121 cctgataggg tatcatcact tttatctaca ctcacagaac ttttaatacc tgaaccaaaa
    27181 atattggtat ctgataatga agcattgagt aacaaaccat cgcttgaacc ataaccaatg
    27241 cctcctgaaa tagcacccgt agaagcttct ttaacattga cgattaaatc tatatgtgta
    27301 tcatctactt tttcttcttt aatttctaca tcatcaaaat aagaagttct tcttaaagca
    27361 tttgtagatt cacttaaatc ggtgcgattg tataaatttc cttcggtgat ataaagttcg
    27421 cgacgtacta ctctatcgac cgtgcgagaa tttccagaaa tgataacatt tcttatatag
    27481 actttatcgt gaggaatgac cttaaataca acgctagctt cttgggtttg atcatttttt
    27541 tgaatatcag gataaacctc tgcaaaagca tagcctaaat cagcactttg tgtttctatg
    27601 gtttttacat ctttgcgaat gtcttctata ttgataagtt tgccttgggt tgagcgtagg
    27661 ttttttacat tttgtatatt ttcttcctcg ctaaataaag gattttctat acttatattc
    27721 tcaattttat aaggcttgcc ttctttgata aaataagtca gattggcctg ataagtatcg
    27781 gtataggttt taagataagg cgaggatact tgtacatcaa gatatccttt tttcatgtac
    27841 tcatcgctga ttcttgcgct atcattgctt aattcaaaaa ttttgagttt tccatcattt
    27901 cttccccaca tccagcccat aaattctttt tctttattga ctatagcagg ttcaatatct
    27961 gaatacgaaa atttctctgc cccgcttaaa ttgacattat taatgatgat attttctccg
    28021 cgattgacta taaattcaag ctctagtcct tcggtatttt ctagagtttt ttttctgtat
    28081 tctactatgg tatcaaaata gcttttagcc tcataataag ctttgatgcg ttcgcttgct
    28141 tctttagcgc ttgcttcatc aaataaagtt cctcttttta tacccaaaat gctctctact
    28201 tgttttctat cattagatgc aattcctgta atgcttattt tagctatgct tggtttttct
    28261 gtgacaatga tatttaaaat accattattt tcctctacgg caatattttc gaaataattt
    28321 tgtttataaa ggttaagtat ggcggtattg attttatcaa gatttattgt ttcgccgatt
    28381 tttaatcctg taagatttaa agcacttgca tttgaaagat gatttaatcc gctaaattta
    28441 atttctttaa ttactgctgc attgcttagt gcaactaagg cacaaatgct gatgattttt
    28501 ttcatttatt tttacctaaa gctttattaa aaatttgtat aatagcagaa aaaatttaac
    28561 aaagggattg agataatatt atgaaagtag caattatagg gcttggattg atagggggtt
    28621 ctttaggact ttgtttaaag gaaaataaat taatttcttg tgtgtatggt ttagattcaa
    28681 gcaaggaaaa tgagcaagat gctttaaatt taggacttgt tcatgagctt atagaatttg
    28741 aaaatttgca tttgtgcgat atgattttta tcgcaacgcc tgtaaatgct atcatagaga
    28801 ttttacaaaa attagtaaat ttgccttcaa atacaaccat tatagagctt ggaagtacaa
    28861 aaagaaaaat catagaaaaa ttgcctgcaa agcttaccaa acaaactctt tttgcccatc
    28921 ctatggcagg aactgaaaac agcggcccaa aagcggcttt taaagagctt tataaggatg
    28981 ctgtttgtgt gttgtgtgat agtgaagtgg ctgatgattt gcaccaaaaa agagcagtag
    29041 aaattttttc gcatttgggt atgaggattg tttttatgga tagcacagct catgatcatc
    29101 atgccgctat tatttcgcat ttgccgcatg tgattagttt ttctttagca aattttgtga
    29161 tgaaagaaga agataaaaga aatatcgttc atttagcggg tggttctttt aagggtatga
    29221 gtaggattgc taaatcatct cctattatgt gggggagtat ttttgaacaa aacaaagata
    29281 atgttttaag ttctattgaa ttttttcaaa aagaattaga attttgcaaa aagatgattg
    29341 aagaggataa aaatgaagaa ttaaagtctt ggatgcaaaa agccaatact ttaagagaaa
    29401 ttttgtgaaa tttgctggat atttactgaa attataataa aattttttta agttttttaa
    29461 gaaaaaataa attttgttaa aataaaaata tatttaggaa aaaatatggc gagaaaaaag
    29521 ggaaaaattt atttatattt gttagttttg gttttaatcg gtgttttggc gttttttatt
    29581 tcaaaaacga atgcttttga aacaacacct cctaaaatcc ttatgccaga tatcatttat
    29641 agtgatctta aaaaacctat ttcagttcat gtaaaagatg atgaaggttc tattgaaagt
    29701 gttcagattt tcttgcaaaa agaaggcaat gaaacaggta tgcttatagc ggatgaaaaa
    29761 attcaaaatt caaatgatat taccttacaa gttgctctac caaaacttgc ctataaagaa
    29821 aaagtaaaat cttttatcat ggaaattaaa gccaaagata agagtttttg gaattttttc
    29881 ggtggcaatg aagcgagcaa acaagtcctt atcatgattg atgatagtgc tccaaaggta
    29941 aatgtattga gcaattctta tcagattgag caaggaggtg ctgctagtgt tgtgttttca
    30001 gctagtgatg caaatttaga taaggtttat atcgaaacaa atacaggaaa aatttttcaa
    30061 gctactcctt atttaaaaga aggctattac gcagctctta tagcttggga tgcaagagat
    30121 gaagaatttc gtgcttatat cattgctaca gataaggcag gaaatataac caaagagcgc
    30181 ataaggtatt attttgtcaa tcgcaaatac cgcgtttcaa atatcaatct tacagataga
    30241 tttttagatg gcaaaataga agatttagca caagaatatg cgccaaagga taacaatttt
    30301 acgcgttttg agaaatttaa atttgtaaat gaaaccttaa gaggcaataa tgaaattttg
    30361 atacataaaa tcacttcaga agtgcctgaa agtaaaatcg atgattttaa aatcgattta
    30421 tttttaccac ttcgaaatgg tatgaaggta gcagattttg ctgatcatag gtattattct
    30481 tacaatggac aatttgtaag cgattcttat catatgggta tagatttagc aagcgtggca
    30541 gaagctccta ttataagtaa taattcaggc aaagtcgtat ttgcagaaga aaatggaatt
    30601 tatggactta atttaatcgt ctatcatggt tttggagttt atagtcttta tgggcattgt
    30661 tcttctaaaa gtgttgaact tgatgagatt ttaagcaaaa aaagtgtaat aggtagaaca
    30721 ggtgtaagtg gattggcttt gggggatcat ttgcactttg gtgttttagt tcaaggtgtt
    30781 gaaacacgcc ctgagcaatg gcaagataaa aaatggatag aaaataatat ttacaatgtt
    30841 ttaaacgaag gtaaaaaaat aattttagga aaaaattaat gaaacaatta actttagcaa
    30901 aaactgtcaa aggcgtaggt ataggacttc acaaaggtga gcctatagaa atcactttag
    30961 agcctttaga agcaaatagt gggatagttt tttttagaag cgatttaaat gctacttata
    31021 aagcaagccc tgaaaatgtt atcaatactc aaatggcaac ggttttgggc gatgaaaggg
    31081 gatttatttc tactatagag catttaatga gtgcaatcaa tgcttatggg atagataatg
    31141 tccgcatcgt tttaaatgct aatgaagcac ccgtaatgga tggatcaagc attagctttt
    31201 gtatgatgct tgatgaagca ggggttaaag agcttgatgc acctaaaaaa attatggtga
    31261 ttaaaaagcc tatagaggta agagacggtg ataaatatgt gcgtttaact ccgactaaag
    31321 aaccgcgtat taattatact atcaagtttg ataatgctgt tataggcgaa caaagctata
    31381 attttgaatt cagtaagaaa aactatatag aaaatatagc aagagctagg acttttggct
    31441 ttttaaaaga tgttcaagcc cttagagata tgaatttagc actaggtgga agtttagaaa
    31501 atactatagt ggtagatgaa aatcgtattt taaatcctga aggtttgcgc tttaaagatg
    31561 aatttgtaag acataaaatt ttagacgcga ttggagattt gactttgctt gggtaccgtg
    31621 tttttggaga ttatatttca tatgctggaa gccatcattt aaatcattta cttactaaag
    31681 aagttttaaa agataaagat gcttatgaga tagtgaccct tgaaaaagca aatgaaaaag
    31741 cttatgaaaa ggtttttgca taaaaaattc attattgctt aatgccttat ctaagccttt
    31801 gatgattggg atttatcaag atgataaact tgtaaaaagc atagagagtg aagaaaaggc
    31861 aagcgagttt gtacccaaaa ttttaaagat tttgctaaaa gaatttagct ttgatgaatt
    31921 aatttatgcc aatggtccag gctcttatat ggggattaaa atttcttatg taagtcttag
    31981 gactttgagt atagtgaaaa atatccctct ttttgctatc agtgcctttg agcttaacaa
    32041 caatcaaccc attgctgctc ataaaaatat gtgttttgta aaaaaagaag atgagatcat
    32101 cttggaggaa aatacagctg gagagttttt tttacctcca aatttaagca agcttaataa
    32161 aaaagatgat aatctacctt tttacttttt atctgcaatt taaagaattt aggaaaaaaa
    32221 ttgaaaattt tagtacctgc tacaagtgca aatttaggcc ctgggtttga ttgtttggga
    32281 ttgagtttag cactttttaa tcatactatt atcgagaagt caaatttttt tagtatcagc
    32341 gtcaatggtg aaggaagcga gaatttaagc cttaaaaaaa ataatatttt tgtaagtatt
    32401 tttaatgaaa tttatcaaag attaagtggt agaaaagatc attttagatt tatttttgat
    32461 aatgccattc ctttatctcg cggacttggc agctcttcag cagtgattat cggtgctatt
    32521 gcaagtgctt atgagatggc aggttttaaa gcagaaaaag agaaaatttt aaataaagcg
    32581 ttaaaatacg agaatcatcc tgacaatata gctcctgcag cacttggggg ctttgtagta
    32641 tccatggtag aaaatgaaaa agttttcagt ataaaaaaag atttggatga aaatttaaat
    32701 gctgttgtgg ttatacctaa tgtggcgatg agtacagaac aaagtcgcaa cgccttgcct
    32761 tcgaatttaa gtttgaaaga ttgtgttttt aatctttgtc attcttcttt tcttacggct
    32821 tgttttttag aaaaaaagta tgatttgctc gctcttgcta gtaaagattt attacaccaa
    32881 acgcgtagaa tgcaaaattt acccgagctt tttgaggtgc aaaaatttgc tcttgaaaat
    32941 aaggctttaa tgagtacgct ttcgggttca ggctcaagct tttttaattt agcatacaag
    33001 gatgatgcaa agcatttagc tcaaaaaatg gagcaaaaat ttagaaattt taaaattctt
    33061 tgtttagaat ttgataataa aggctttaaa atttgctaaa agaagaaaaa aaaagatata
    33121 attttgtaaa agataaacat gagcccattc gaatgtgtat agtctgtaaa aatcgatatt
    33181 tacaaaaaaa tatgcatcga tttaaacatt ttcaaggtga gctttataaa gactttgctt
    33241 ttggacgcag tgtttatttg tgtgagactt gtattttgag tgaaggcaaa gtcttgcaaa
    33301 aagcattttt taaatcttgc aaaaatttaa atacaaaaat cactcagcag aatttaaagg
    33361 agatagtttt aaatggcaaa aattagaatt catgaaattg cgaaagaatt aggctatgac
    33421 agcaaagaaa ttatcgagaa agcaaatgaa ttgggattga atatcaaaac cgcatctaat
    33481 gctgtagaac ccgaagttgc agcaggaatt tatgagtata tacaaactaa aattataccc
    33541 gaggctttca agaaaaattt aaaacaagat cctgtaaaaa aagccaaagc tgcacccaaa
    33601 gaagaaaaaa aagaagaaaa atcacctaaa gaagtagaaa caaaagctcc agctaaagtc
    33661 gtagaagaag taaagcctga gccaaaaact cctgaagagc ctaaagaaaa cattcaagag
    33721 agtttagcga gtgcgacttt agctaaaaga agagggcttg tgattgtcaa aaagaaaaaa
    33781 gatgaagaag aagctgcgaa aaaagaagag ccaaaggcta gcactccttc aaatgaagag
    33841 cgtcttagct taaaaaccat gttttcaaat gcggatgaaa atttaaagaa aaagaaaaaa
    33901 gagaaaaagc cttttgtagc gactaagaaa gaaagtgctg aaaaaatgga ctttttagaa
    33961 ggccatgatt ttgctgatat ttctttagaa gatgaagatg tggtggtttt acctgatttt
    34021 agtgtaaaag aacaagaaaa accacaaaat actatgaaaa aaccacctaa ctttttgcgt
    34081 caagcagtag gaaattcagc aaatcttggg cttgagggtg gaattcaaag aagaagtcgt
    34141 aaaaaaccac ctaaaaaagt tgagaaaaaa gaaaatgaag cggtttcgag cgtagaaatt
    34201 tcaaaagaaa ttcgtgttta tgaatttgca gataagatag gcaaaagcgt gagtgaagtg
    34261 atttcaaaac ttttcatgct gggtatgatg acaactaaaa atgatttttt agatgaagat
    34321 gcgattgaaa ttttagctgc tgaatttggc atagagatca atatcatcaa cgaagcagat
    34381 gagtttgatt atgtaaaaga ctatgaagaa gaagttgatg agaaagattt ggtaagtaga
    34441 gcaccggtga ttactatcat ggggcatgtt gatcatggta aaacttcttt gcttgattat
    34501 atcagaaaat ctcgtgtcgc tagtggcgaa gcagggggga tcactcaaca tgtgggcgct
    34561 tatatggtgg aaaaaaatgg gcgtaaaatc acttttatag atactccagg tcacgaagct
    34621 tttactgcta tgcgtgcaag gggtgcgagt ataacagaca tcgttatcat cgttgtagca
    34681 gcagatgatg gggtaaaacc acaaactaaa gaagcgatca atcacgctaa agcagcgggt
    34741 gtgcctatta tcatagcgat taacaaaatg gataaagaag ctgcaaatcc tgacatggta
    34801 aaaactcaac ttgccgaaat ggaaatcatg ccagtagaat ggggcggatc ttatgaattt
    34861 gtaggagttt ctgctaaaac gggaatgggt attgaagatt tgcttgaaat cgtgctttta
    34921 caagctgata ttttagagct taaagccaat ccaaaaagct ttgcaaaagc aagtgttata
    34981 gagagttcta tccaaaaagg acgcggtgcg gtagctacta tcatcgtaca aaatggaaca
    35041 cttaaagtag gaagcactat cgttgcaggt gaagcttatg gaaaagtgcg cgcaatgagc
    35101 gatgatcaag gcaaggcttt aaaagagatc aaaccgggtg aatgtggtgt tatcgtaggg
    35161 cttagtgaag tggctgatgc gggtgaaatt ttaatcgcag taaagagtga taaagaagca
    35221 agagagtatg ctaacaagcg ccacgaatac aaccgccaaa aagaacttag caaatccact
    35281 aaagtaagta tagatgagct tggggcgaag atcaaagaag gaaacttaaa agcccttcct
    35341 gtgattttaa aagctgatgt acaaggatct ttagaagcct taaaagcaag cttagaaaag
    35401 cttagaaatg atgaaattaa agtcaatatc atacacagtg gagtaggagg gatcacgcaa
    35461 agcgatatag agcttgcaag tgcaagtgaa aactccatcg tactaggctt taatatacgc
    35521 ccaaccggag agatcaaaga gcgtgctaaa gataaaggcg tggaaataaa aacttataat
    35581 gttatttata atctacttga tgatgtaaaa gccttgctag gtggtatgat gagccctatc
    35641 atctctgaag aacaacttgg acaagcagag attagacaag tgatcaatgt gccaaaaatc
    35701 ggacaaatcg caggttgtat ggtaaccgaa ggggtgatta accgtggagc taaaattcgc
    35761 cttatccgtg atggagttgt ggtttatgaa ggaaatgtaa gctcgcttaa acgttttaaa
    35821 gatgatgcta aagaagtggc aaaaggctat gagtgtggcg taggtataga agggtgtgat
    35881 gatatgagag tgggtgatta tatagaaagc tataaagaag tagaggaaca agcaagtcta
    35941 tgaacccaag tgagattaaa aaactacgca ctgaaagcat cttaaaagag ctgatccctg
    36001 aagctttagc aaatttagat gatgaaaatt tgaaaaattt gtgtgtagtg gatgtagagt
    36061 gtaaaaaagg cagatatgat gcttttgtgt atcttgataa gatgtttttt aatgttcatg
    36121 agcaagaaaa aattttatct tctttaaaaa aggcaagtag agctttgcaa aattactgca
    36181 tgagcgagca gggctggtat aggtgtccga attttcattt taaatttgat gataggcttg
    36241 agtatcaaaa ccatatggac gcactttttg aaaaaataaa aaaggataaa aatgaatctt
    36301 gaagcccttt gcaaagaagc agaacttagc ttttatgatg atgagctagt aagtgaaaat
    36361 ggtaaaaaaa tttatagaat ttatgtgcaa aaagaaggcg gggtaaatct tgatgattgt
    36421 gcaaagctta gtgaaatttt atcgcctatt tttgatgtag aaccacctgt aagtggggag
    36481 tattttttag aagtatcttc agcaggactt gagagaaaac ttagcaagat agagcatttt
    36541 gcaaaaagta tcaatgagct tgtaaaaatc acaacaggtg aaaaagaaaa aatcgaagca
    36601 aaaatcatca gcgtagagga tgaaaatatc actttagaaa atttagaaaa tcaagaaaaa
    36661 actactttaa aatttagcga tattaaaaaa gccagaacct tcatacaatg gtaaaaattt
    36721 agatttttaa atttttacct atcttttata taattaaaat taaacacaaa aattcaaaag
    36781 gcatacaatg ctagaagata aatacgattg gaaaataagt aaggcagatc aaaatggtaa
    36841 tgtgtattat tattttccaa aagatgagga tgaatttaaa gaagcagttg tgaaaaatgg
    36901 tggtatgagc gtgtatgttt atcaagatga taaattaata gatgaatttc atacaaaaag
    36961 tcaaggttat aggtggaaaa ctcctatctt tacttatata aaaaatatga ataaagatag
    37021 agaaaaattt cgtagatatt ataaaaattg taaatttttt gcgattgtag attgaaagga
    37081 aatggtatga aatttgtcga gtttaatttt tcaaatggag aaaaaataca aaccgaaata
    37141 aaagaatcaa atgaagaaaa ctttagagca tttttagaaa aaagactaaa gaattttgat
    37201 caatatatca aagctacaaa agggataatt gaagaatgca aaagactaaa tatcgttaat
    37261 agagatgaaa ttattatttg aattaaaaaa aggattgttg caagaataca ataataaaag
    37321 tggtaatgga tgtccgcatg cttgcattaa ttcccattat ttagaatttg taaaatatgt
    37381 caatgcctat aaagaatata cctcaaaaga tatggttaag tatttaaaaa caagaggcgg
    37441 agataaagaa tttaaggtag aaataaaaaa tcaaaaaata gaagttattg ccagtgttga
    37501 taatattatt agaacatatt ctttggaaag gtttttaaga tatagcgttt taggtaaaat
    37561 tgaagaagat tcaagctatg ctaaaccatt gtttgaagat atattaaata attcaaacct
    37621 tagcataatc aagctaagcg aaaatgaaaa aatttataaa gaacagcatt ttgaaaatga
    37681 aaagatacta agcgaaaatc aaaatctatc tttaaatcaa attctttatg ggcctccagg
    37741 aacaggaaaa acttaccata ctatagataa ggccttggaa atcttgggtg aaaatttaga
    37801 aagtagagat gagaaaaaag ctaaatttga tgagtatgta aaaaatggac aaatagtctt
    37861 tacaactttt catcaaagct acggatatga agaatttgta gaaggtataa agcctagttt
    37921 aaatagtgat gaaaattcgc aaattaatta taaggttaaa gatggaattt ttaaagagct
    37981 ttgcaagaaa gctttggaga atagagatga catagaaagt tttaattttt atataaatga
    38041 cttgaaagaa aaaacaaaag aagatgccaa taatcctgaa aaatattttc aattgccaaa
    38101 tacaaaatat tctattcaat atagaggtgg aaaaacattt agaattaaat ttgatgatat
    38161 gagcaaaaat cataaagact atccagtaag tatagataat atagaaaaat tatataaaac
    38221 ttctaatata gatgaaatat ataattcagc atatgttaaa gctatcttaa actatttgaa
    38281 atcacaaggt ttaaaagatt ataaagaaaa agatgaaaaa ataaatttac cttatataat
    38341 catcatagat gagatcaatc gcggtaatgt gagtaagatt tttggtgagc ttatcacctt
    38401 aatagaacct agtaaaagga taggtgaaag cgaggaatta aaagttactt tgccttatag
    38461 cggtaaaaaa tttggagtac ctaaaaatgt atatatccta ggcactatga atacagctga
    38521 tagaagtatc acttctcttg atacagcctt aagaagaaga tttgaatttg tagagatgat
    38581 gcctgatcct gatttgctta agaatgtttt tatttgcaaa gatgtagaaa atccaaataa
    38641 agatgaagat tatttaggag atgatgctaa aacagaaggt tttgcagaga tacttcaaaa
    38701 tattttaata agtataaata aaagaattga gtttttattg gatagggaaa aaccatagga
    38761 cacgcatttt ttatgagtga agctgttaaa tttaataaag ataattggtg taaaccagat
    38821 gaatatgaag aagattggta tgttttaagt atctcaaaat taaaaagtat ttttcaaaat
    38881 aaaatcatcc cgcttttgca agagtatttt tacaatgact atgctttaat tagcgcagtt
    38941 ttaaatgata atggtatgat tgaaaaatgt gaaaaaaatg ataaatatct acaaaaaata
    39001 aaaaatttgg acaatgtaga tagcgagaag attatttata atattgcttc atttgataat
    39061 aaaatttgga acgatataaa aacttatcaa gctatttata atgatgggga aaatcaatca
    39121 aaaaatgata aacaataaca ccttttccat catcgagcac caagcttttt ctaaagaaga
    39181 tttgcaagga attttcaaag aaaaggctaa aaaattctat caagagctag aagactttgc
    39241 taaaaataat gaaaattttc taggctttaa aaacaaaaac accctaacag ctaaaaatta
    39301 tgtaggcatt atccaaacca aaagtggagt tttagaaatt ttaccaaaat gtacaaattt
    39361 ggacagttat aaagataaag agtgcaaatt atctactatc tcgaaagaaa aactactaaa
    39421 aaattatatt ttaaatcaaa taagtcaagc taaaaccagt gagaattttt atggagagga
    39481 ttttgctttc aatcccaaaa cccttttaat caatatgcta aaaaccttaa aaaattctcc
    39541 ttttaaaaaa tcccaaattt catctttgca aatttctaaa atgcctttgc tagaggtatt
    39601 tatcgcaatg tttttggacg aattggatgg ggtttataaa aagggtttga aaaaggatta
    39661 tataagcatt gaagaaaata gaaattttct taaaggaaaa ttgcaattta gccaacattt
    39721 aaaacaaaat ttagttcata aagaaagatt tttcactcaa agtgatgaat ttatgctcga
    39781 tattgcgccc aatcgcctta taaaatccac tctcaatctt ttaaaatcca aaaccactca
    39841 ccataaattt aaaatcatca aagctttgga aatgtttgat gaggtgggat tttctacaaa
    39901 ttatgaaaaa gatttcactt ataaaatttc aagacatttt gattattatg aaaatctact
    39961 ttcttggtgt aagatctttt tgcaaaatca aacttttgca ccttataagg gcaaaaatga
    40021 agcttttgcc ttgctttttc ctatggaaaa actttttgaa gattatgtag ctcatatgct
    40081 aaaaaaagca aatccgactc aaaatatcaa aactcaaagc agcggaaaat acctgatctc
    40141 aaaaaagggt gaaaaatgct ttatgttaaa gcctgatttg tatatagaaa atgaaacgat
    40201 tttagatacc aagtggaaaa ttccagatag caatgaagat aaaaagcatg gcatagcgca
    40261 aagtgatttg tatcaaatgt ttgcttatgc ttgtaaattt aaaattcatg atattaaatt
    40321 gatctatcct ttatgtgaaa gaacgatgag tttgcaaaat acaataaaag aattagaatt
    40381 caatgcaaat gagcatttgg catttttaaa tgataatagc cctttgaaaa caaatataaa
    40441 agtgcaagtg atttttacac ctttaccttt ttagtaaaaa ctttgctagc aagtgtatca
    40501 aaaagccaaa gcaagctaca gctatgatac aagcaccgct tgagagatta aaataatagc
    40561 ttattataag ccctaaaacg caaaaaatca tactcaatac acttgctaaa atcattatta
    40621 aacctagttt ttttgtaaaa ttttcagcta taaagctagg tatgctaagt aaagccatga
    40681 tcaaaataat ccccacaagg cgtatagaaa tcactatgca aaatgccata agtgcgatta
    40741 aaagataatg aaaaaagctt gtatttatcc ctcgcacttt tgcaaattcg acatcaaagc
    40801 ttaaagcttc aaattgtcta taaaataaaa gcattaaaac aatcaccacc ccatctacta
    40861 tcgccatcag ccatagatct tgcattccta ctgctaaaat atttccaaaa agataagcca
    40921 tcaaatccgt gctataacct ggacttaaat ctataagtat gatcccaaaa gccatcccaa
    40981 aagcccaaat cacagcgact atactgtcgc ttctgtgctc ataacgcttc gataaaaatg
    41041 ctaccaaaaa ggctaaaaag agtgtgaaaa tacctgtact gatcaatata ggcaaagaaa
    41101 aataaaacgc tataccaata cccccaaaag ccccatgcgt gatgcctcct gctatggaaa
    41161 agagtcgatt tatcatcaca agcgtaccta cgactccaca agcaatgctg actaaaaccg
    41221 cagccaataa agcattttga aaaaaggtga aatttaaaat ttcaaacatg gctttccttt
    41281 gaaaatttca aacaaaaatt ttcttttttg aaatttgatt tttttaaatt tcttcttgca
    41341 aattcttgtt cgcaaatttt tttcttttca caattttctt catcgcaaaa gcaagaattt
    41401 aaactcattt ctacatcaca aaagtgcgaa tgattttcat aaaggtgttt taaaaatacg
    41461 cttttgtctt tttctttggt attggtatgc aaaaagagtt ctttgtttaa atacgcgatt
    41521 ttatcactat aagcaagcac gagattgata tcgtggcaaa tgagtaaaat tcctatgccc
    41581 ttttcatgca aagaacttag gagttcaaaa atttgaatcg cggatttgct atcaacgctt
    41641 gctgtaggct catctaagat cagcatttta cattcatcga ctaaagctct agcaataaaa
    41701 acgcgttgtt tttgacctcc gcttaattca ttgatttttc tatcccaaaa atcctgcata
    41761 cctacacttg ctagagcttc taaggctttg tttttatctt ttttactata aaaaccaaaa
    41821 atttttttat tgacaagtcc cattaaaacg atttctataa cccttgggca aaagttaggg
    41881 tttgctaaag tgtgttgagg gacatagccg atttcatttt ttttaatccc atgaaaactg
    41941 atagtttttt tagtctttaa aagccctagg atgagtttta caagcgtaga ttttcccgca
    42001 ccattagggc cgatgataga aagaaaatct ttactatcat agcttaggtt gatatttttt
    42061 aagattgttt cgttattgta agcgtaatta agatttgata tttcaaaaaa aagcattaaa
    42121 aaacctaact ataaattttc ataaaaagca tttgctgttt ttaaaagttc attttcccaa
    42181 tcataagata aataatctat cttgtaaatt tttacattgt attctttttc taaagttttt
    42241 gctgtttttt caggaaaacg agtctgtaca aaaataactt taatattttt ttctttaatc
    42301 aacgcaccca aattttttat atctttactt tttagttttt ttcctaaaaa ttctatatga
    42361 ttttgcacaa gatcataacg cttggcaaaa tatgaccaag cgggatgata tgttataaat
    42421 tctttatttt ttactttttg taattttgaa gagatctgta aatttaagac atctaactct
    42481 gttaaaaatt tatctaaatt atgcttgtat aagcttttgt tttgaggata tttttgaact
    42541 agagcattgt aggtatttaa ggctatgttt tgaactaaaa tgggatcaag ccaagtaaaa
    42601 ggatctaaaa tttctttgga gttgctagaa ctagttttag ctagaggaat atctttttgc
    42661 atgtctatga ttttaacttt tggaaatttt tgttctagtt tatctgttaa tttcttttca
    42721 aattctaagc ctatggtaaa gtaaagctca cttttttcaa gctttttcat agggtttgat
    42781 ttggattttg gcttgtgtgt atttgtggat aagatgttta tatttagagt atcacctgct
    42841 atttttttaa caaaaaaagc ttgtggggct atgcttacgc tgattaaagg taaatttaga
    42901 ttttcacttg gttgtaaggt tttagcgcaa agaaaggaat taaaaagtcc taaaaatata
    42961 aaaagaagga atatttttt
//
LOCUS       DAQUWA010000006        40359 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.006, whole genome shotgun sequence.
ACCESSION   DAQUWA010000006 DAQUWA010000000
VERSION     DAQUWA010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 40359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40359
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.006"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..523
                     /locus_tag="R8X70_000255"
     CDS             <1..523
                     /locus_tag="R8X70_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEF2928074.1"
                     /translation="IKKHMKNIRNLTNQTCQMGILKEENVLYLEKIDANNPVQLKSFI
                     GTSYPAYATSLGKALLSNKNKEELKKIYPNNFEKITENTLKNIDELYQQIEQIKKEKI
                     AIESGEINPQIECMAIGIEHKNKIIAAISISYLIFYSNETFREKNKKILLEEKNKIEK
                     ALKIHFNDLEELY"
     gene            complement(548..5098)
                     /gene="rpoC"
                     /locus_tag="R8X70_000256"
     CDS             complement(548..5098)
                     /gene="rpoC"
                     /locus_tag="R8X70_000256"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEF2928075.1"
                     /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENAGDAYYDNEST
                     KKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANTNNEDAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKMGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIIKSILPDFVTENMWNKVLKKKDIAALVDHVYKQGGLQ
                     ITASFLDKLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKTTNNTLSRDMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITVEDCGTHEGVEINEITADSSIIETLEERILGRVIAEDVIDPITNSVLF
                     TEGTLIDEEKARILGESGVKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKDI
                     VANRRNAAILLVEPKIKAPFKGIINIENIHEDVIVSIKDKKQEAKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGAEVEENESIVEMIKEGWNVPNRIPFASEILVKDGDPVVQ
                     NIKAGEKGILKFYILKGDGLDRVRNIKKGDIVKEKGFFVVVADENDREAKRHYIPRES
                     RIEFNDSEEVNFDSIIASAPKQEKSVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSADE
                     QIDEATGKRSLVINEYLPSGVRPTLIIAGKGDKAVRYQLEPKTVIFVHDGDKISQADI
                     LAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVHFDKPLRSKERLIIQ
                     AEDGTSAEYLIDKSKHIQVREGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISEI
                     QQVYRGQGVVISDKHIEVIVSQMLRQVKIINSGHTKFIEGDLVSRRKFREENERILRL
                     GGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVIL
                     GRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(5091..9227)
                     /gene="rpoB"
                     /locus_tag="R8X70_000257"
     CDS             complement(5091..9227)
                     /gene="rpoB"
                     /locus_tag="R8X70_000257"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEF2928076.1"
                     /translation="MCNMLDNKLRNRLRVDFSNISKQIEIPNLLQLQKASFDYFLNLE
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGIKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVVNKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPSDFMDRIEYDIKDEKGNIIHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     EIANDLANGVDAAIINSFAQDNETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     STHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVANGKVTNEVVYLTAT
                     QEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGP
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMMDREEMLRVCALLSKAPLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIK
                     AYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLVGLRLGDQIQEIFDRKQKDFVKELRAKMLEICSIPRLVNEKEFIKNLSDEELLNCA
                     RDWSKGVKFATPVFEGVNIEEFAKLFEIAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(9338..9715)
                     /gene="rplL"
                     /locus_tag="R8X70_000258"
     CDS             complement(9338..9715)
                     /gene="rplL"
                     /locus_tag="R8X70_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEF2928077.1"
                     /translation="MAISKEDVLEFISNLSVLELSELVKEFEEKFGVSAAPVMVAGGA
                     AAGGAAAAAEEKTEFDIILVDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKADAEEAKKQLEEAGAKVELK"
     gene            complement(9733..10212)
                     /locus_tag="R8X70_000259"
     CDS             complement(9733..10212)
                     /locus_tag="R8X70_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEF2928078.1"
                     /translation="MTRSEKVEIIAKLQEEFKISEAIVVCNYKGLSTKKLEELRNNAR
                     ENNVKVQIIKNTLANIALNNSGKTGLVLKDTNVYLWGEDQLSVSKVAAKFEENNDKFE
                     IKTAHIEGEVADVAKVRALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(10361..11062)
                     /locus_tag="R8X70_000260"
     CDS             complement(10361..11062)
                     /locus_tag="R8X70_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEF2928079.1"
                     /translation="MAKITKRLKELSQKIDVSKEYALNEAIETVRNLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLIE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNISTFIKAINKHKPAAAKGRYIKSAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(11120..11545)
                     /gene="rplK"
                     /locus_tag="R8X70_000261"
     CDS             complement(11120..11545)
                     /gene="rplK"
                     /locus_tag="R8X70_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEF2928080.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(11571..12104)
                     /gene="nusG"
                     /locus_tag="R8X70_000262"
     CDS             complement(11571..12104)
                     /gene="nusG"
                     /locus_tag="R8X70_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEF2928081.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFAHLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(12118..12297)
                     /gene="secE"
                     /locus_tag="R8X70_000263"
     CDS             complement(12118..12297)
                     /gene="secE"
                     /locus_tag="R8X70_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEF2928082.1"
                     /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVAVISLFL
                     ALVDWIMSSIVSAIV"
     gene            complement(12316..12391)
                     /locus_tag="R8X70_000264"
     tRNA            complement(12316..12391)
                     /locus_tag="R8X70_000264"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12356..12358),aa:Trp,seq:cca)
     gene            complement(12403..12561)
                     /gene="rpmG"
                     /locus_tag="R8X70_000265"
     CDS             complement(12403..12561)
                     /gene="rpmG"
                     /locus_tag="R8X70_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEF2928083.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNGKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(12614..13813)
                     /gene="tuf"
                     /locus_tag="R8X70_000266"
     CDS             complement(12614..13813)
                     /gene="tuf"
                     /locus_tag="R8X70_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEF2928084.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGIVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(13874..13948)
                     /locus_tag="R8X70_000267"
     tRNA            complement(13874..13948)
                     /locus_tag="R8X70_000267"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13914..13916),aa:Thr,seq:ggt)
     gene            complement(14044..14120)
                     /locus_tag="R8X70_000268"
     tRNA            complement(14044..14120)
                     /locus_tag="R8X70_000268"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14084..14086),aa:Gly,seq:tcc)
     gene            complement(14127..14212)
                     /locus_tag="R8X70_000269"
     tRNA            complement(14127..14212)
                     /locus_tag="R8X70_000269"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14176..14178),aa:Tyr,seq:gta)
     gene            complement(14273..14348)
                     /locus_tag="R8X70_000270"
     tRNA            complement(14273..14348)
                     /locus_tag="R8X70_000270"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14313..14315),aa:Thr,seq:tgt)
     gene            complement(14483..15220)
                     /locus_tag="R8X70_000271"
     CDS             complement(14483..15220)
                     /locus_tag="R8X70_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEF2928085.1"
                     /translation="MSILKIKNLQKYYGFHHALKNINLEVKQKEVVVILGPSGCGKST
                     LLRCINGLEEIADGVIEIGQDKIDKNFKDWTRVRQKVGMVFQSYELFEHLSVKDNILL
                     GPLKVQKRAKEEVLQEAKIWLEKVGLAHKIDAYPKELSGGQKQRIAIVRSLCMNPELM
                     LFDEVTAALDPEIVREVLEVILNLAKDGMTMLIVTHEMGFARAVADRIIFMDNGEIIE
                     ENTPDGFFENPKSERAKKFLNLFDYHK"
     gene            complement(15222..15878)
                     /locus_tag="R8X70_000272"
     CDS             complement(15222..15878)
                     /locus_tag="R8X70_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEF2928086.1"
                     /translation="MFDLLNPDTLSRLWKGLYITLEISIVSIIITSFGGLFLGILMSL
                     KNRYIYILCRFALEFVRVMPLLVWLFMVYFGLSRWLGINLSSVSSAIIVFSIWGSFEM
                     MDLVRTSLKSIPKHQYESAASLGLNKAQSYFYIIIPQAMRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFNNKNDLAPFIIYGLIFFIFFLICYPVTLYSKKLEKKWS
                     "
     gene            complement(15871..16572)
                     /locus_tag="R8X70_000273"
     CDS             complement(15871..16572)
                     /locus_tag="R8X70_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEF2928087.1"
                     /translation="MDFDFILANSNAFIAAAWLTLKLSFFGIIFSIIIGFFCILMSYF
                     KITIMEAFCKVYIEFSRNTPLLIQLFFLYYALPKFDIHLEQIPPLNLICLSVDEALRP
                     AFACAIVGLSFLGGSYMAESFRAGFEAIKKQQFEAGLSLGFTKLNNLRYVIMPQALGV
                     CLPGISANIVFLIKETSVVSIIALPDLVTVMKGLNSLTYKTDELLLLLFLGYLCIILP
                     ISLFLFFLEKRFSNV"
     gene            complement(16583..17179)
                     /gene="nssR"
                     /locus_tag="R8X70_000274"
     CDS             complement(16583..17179)
                     /gene="nssR"
                     /locus_tag="R8X70_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HEF2928088.1"
                     /translation="MQEYLDFLKGIGKIRKFEKNNILFFEGEKALKFFILLKGRVRVY
                     KSTAGEKEITLHYFTPPNFIAEMPTFKRLRYPANAICEEYCEILEIDFEDFETLCSQN
                     KEFNFLLISSLFEKIKILEKKLLENSLDLKSKLARYLLENEKNLAQISQRQIAVDLSV
                     RAESLSRILKEFKNSELIETKKGKIEILDKEGLKKGLW"
     gene            17261..17647
                     /gene="ctb"
                     /locus_tag="R8X70_000275"
     CDS             17261..17647
                     /gene="ctb"
                     /locus_tag="R8X70_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HEF2928089.1"
                     /translation="MKYETINQESIAKLMELFYDKIRKDKDLGPIFNNAIGTSDEAWK
                     EHKAKIGNFWAGMLLGEGDYIGQPLKKHLDLPPFPQEFFGIWLGLFEESLDKIYNNEE
                     MKNVILQRAQMIASHFQNMLYRFGGH"
     gene            complement(17650..19464)
                     /gene="recG"
                     /locus_tag="R8X70_000276"
     CDS             complement(17650..19464)
                     /gene="recG"
                     /locus_tag="R8X70_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEF2928090.1"
                     /translation="MKIKENDFDFFKKLKIKSAIDLALILPKKIENLSPSKTPKENEL
                     CTQKIIIKSIHSKKGQLFGLGFCKEWSQDISFVFFHPRAWHFGICKIGKELILNGKLT
                     RFGHVWQFNNPKILTSFAGFAPKYQIQGLQDKKISEFIHKYLNYENLKESGIEDKYIH
                     FLLNLHTYDEKSFLMFENLERFEKDLKYIEIYNFLKRLKAKKSHFKAYEIEIFNIANW
                     LKNLPFSPTRDQLNALKDIEQDLGSKEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAI
                     LMAPTSILANQLYEEAKKLLPEFVDILFIKGGKKEKDLEEKIKKANLIIGTHALIHLQ
                     SHNAVLVMIDEQHRFGSAQRQQIYSLNENELAPHFIQFSATPIPRTLSMIQSELLNFS
                     FIKEMPFKKDITTLCIQNEGFAKLSEKIKEEIAQNHQIIIIYPLVNPSDKIPYLSLEQ
                     ARRYWEDNYEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPRLSTIVIVG
                     AERLGLATLHQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAELDLKNR
                     LSGDLLDGFIQHGNEFKYFDFSKDEYILEKAKKDLMEI"
     gene            complement(19454..20674)
                     /locus_tag="R8X70_000277"
     CDS             complement(19454..20674)
                     /locus_tag="R8X70_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEF2928091.1"
                     /translation="MQNLEVSGVKIPFIFEENNDFPIVILKLVFRNCGRSYDEIAGLA
                     KMFARILNEGVDDSFFKELEFKAVNLEASSGFESLEINLSCLKENFEFALKHLENLLL
                     NPRFEEKILEKLKINALGELASKNSDFDYLAKNLLNSEIFECKEFQSPNDGDEKSIKQ
                     ISLSDLESFYKKNINLSNLVVILGGNLAQEKAKGLLNKLLAKLQKGSQNSQKTYEINS
                     KNKDIIQIRKESEQAYIYFAAPFFTKFNDKDFYLAKIALFILGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNASFTRVFGYLQTKNESAKEAKKIVKEVFRDFVKEGVSQNELVQA
                     KNFLIGSTPLRYESLSRRLSISFNEYYQGLPKGYYKEELKLIEKVELQELNAYIQKHN
                     EILDLNFASIANEN"
     gene            complement(20674..21720)
                     /locus_tag="R8X70_000278"
     CDS             complement(20674..21720)
                     /locus_tag="R8X70_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HEF2928092.1"
                     /translation="MKRLDKEEALYLLRNANLVELGEMAYQRKLELHPEKITTFVVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIGKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISISEVLQRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRRAHEIGMKSTATMMFGTVESDEEIIDHFE
                     HLRKLQDETGGFRAFILWSFQSENTALIQKHPEIMKQSSNKYLRLLALARLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIKSLGEN
                     PAKRNTAYEILERF"
     gene            21792..22979
                     /locus_tag="R8X70_000279"
     CDS             21792..22979
                     /locus_tag="R8X70_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2928093.1"
                     /translation="MNYIDLLKNNKNIRILTLVQFIVYFGAWFSQTGVFTLLVSLNAP
                     TWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLSMISIELVSIFCLIFVTSLSML
                     WLLFILIFVRLCVASIYFQAEMSLLAKILNPKELKLANEMHSVIWAVSYTASMASAGI
                     FINFFGIKAAFLFDCCLIIIGILFLTKLHIPHFKQKIQNKFFILIKEGFLYVLQNKII
                     LHLIILHAFIGLTAYETLVTLLAQHEYKEVLSAALVIGFLNAIRALALAFGPIFLSKI
                     TNNKNVFFLYLGQGLGIILWALTQFNFYISFIGLIAAGFCTSSLWAYTYTMIQKNCDK
                     TYYGRVIAYTDMVYLSFSALISQLMGLLFEQGFKLAIITALLGVVFIFAAFYWRWFDK
                     KYL"
     gene            complement(23006..24094)
                     /gene="nusA"
                     /locus_tag="R8X70_000280"
     CDS             complement(23006..24094)
                     /gene="nusA"
                     /locus_tag="R8X70_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEF2928094.1"
                     /translation="MERIADIIESIANEKNLDIESVKEKVIIALINTAKRIYGQEYDF
                     FVDRKNLNLYQKITVVADNDERLNENKESYIEFSKAKKEAPDVEIGDELTYECSLENL
                     GRTAVNILHKELEYHIQKLLEQTIFEKYKNKVGQMVFGNVVRIDNEENTYIEIDELRA
                     FLPRKNRIKGEKFKVGDVVKAVIRRVYTDKGIKMELSRTSPKFLECLLEAEVPEIKDG
                     YVSVVKCARIPGERAKIILQANGANIDPVGATVGVKGVRINAVSKELHNENIDCIEFS
                     NEPEILIARALAPAIVSSVKIENEKAIVTLNSEQKSKAIGKSGINIRLAGMLSGYEIE
                     LNEVNARTTSNTLSNEEALKNLQDLFKI"
     gene            24219..24461
                     /locus_tag="R8X70_000281"
     CDS             24219..24461
                     /locus_tag="R8X70_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928095.1"
                     /translation="MDLKLARNLINEEPKNISLAKIEEAVNQEGQKFFYFDKENSHKD
                     LIALVEHFEKKGLSVYHRTIRYGLDSNDFMYEVHIL"
     gene            24458..25759
                     /gene="miaB"
                     /locus_tag="R8X70_000282"
     CDS             24458..25759
                     /gene="miaB"
                     /locus_tag="R8X70_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEF2928096.1"
                     /translation="MSSKKLFIQTLGCAMNVRDSEHMIAELTQKDNYTLTEDIKEADL
                     ILINTCSVREKPVHKLFSEVGGFEKVKKSGAKIGVCGCTASHLGSEIFRRAPYVDFVL
                     GARNISKITQAVNTPKFMSVDIDYDESEFAFGDFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPLNIIYKEAQKAVDKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSTIEGLERIRFTSPHPLHMDDKFLEVFAKNPKVCKSMHMPLQSGSSQILKAMKRGY
                     TKEWYLDRALKLRELCPNVSISTDIIVAFPGESDKDFEETMEVLEKVRFEQMFSFKYS
                     KRPLTKAATMPNQIDEEIASNRLSTLQARHNEILDDIVKKQENKTFKVLFEELRAGNA
                     IVGRTDNNFLVQVEGSEELLGTFKEVKITNAKRMVLYGEII"
     gene            25743..26366
                     /locus_tag="R8X70_000283"
     CDS             25743..26366
                     /locus_tag="R8X70_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEF2928097.1"
                     /translation="MGKSFKIAFIARLVFILQWLIFLTCKKIYKGDKVDQISNVILFW
                     HGRLALMPFAFRHFGKKGKKAYVMISHHRDGEQIARIIKLFGLDTVRGSTSKGASTAL
                     RSAFKILDENHDVVITPDGPRGPYHSISDGAVLLAQKKNVKIRILNYEARNFWEFKSW
                     DKMILPKPFTHLVYRLSEPLDISSLDKDQAKFFLLEHFKKIEQMDKF"
     gene            26375..27361
                     /locus_tag="R8X70_000284"
     CDS             26375..27361
                     /locus_tag="R8X70_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HEF2928098.1"
                     /translation="MLFLLKKILPQLFTSIILEDKKNILKTSIYKNHKLISSNEKTFD
                     KSEKLLEYVKTLNSKFLFYHTALFLNVKEQGLIPSKNDKDFERFNVGKMSLKSIALNN
                     ALIYTATEHIEYFNELFEDYGGLDFLYSPFAILYHNILKEKPNSDKITLYAYKHEHIL
                     TLIICRGIEILYGDIIFFEEELDLEFGHQEENLDNLGEDTLNDTEVTLDNFNETLEDK
                     LNALDQFDNILGNNENDSEFLDGKDKFDLEEMDQFGNDIELCRHIVTSIEKFYKDDKY
                     PSAFIDKALILSTKELDQSAIEFLEEETLLEIESKPINTLDSIIELMQKELQ"
     gene            27358..27882
                     /locus_tag="R8X70_000285"
     CDS             27358..27882
                     /locus_tag="R8X70_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928099.1"
                     /translation="MKSYSFIQSRKKPIFTLFDKIWFGLFSFGIVFIFAVYFLYLTQI
                     ALTHNFIEEQKEQVLQFQNKTQENGKLYDILLEQSKIANTFHTQNQAFKNSLKNLFDI
                     IVKTDGITLESIEQEENSLKLIGVTPTKEMFALLLETPLKSIFDQSFTTYYRLNNGWY
                     RFISISKQNSGVLQ"
     gene            27879..28397
                     /locus_tag="R8X70_000286"
     CDS             27879..28397
                     /locus_tag="R8X70_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928100.1"
                     /translation="MKDKSLEELNILKIVIYVLSFITVCTALILFLLLPVLKDYKQTH
                     LRKNSQAAIFNAAKAKLDASENKISALRTENNKSLEQFEQQFNLTHFQNFLEKYFENI
                     QITELKLDKKEKYLTHRINIRASINNPRRLYDFIDALAQYNNLVKIDYPMTLKASDHG
                     IMINLNVQIYSN"
     gene            complement(28389..29681)
                     /gene="thiC"
                     /locus_tag="R8X70_000287"
     CDS             complement(28389..29681)
                     /gene="thiC"
                     /locus_tag="R8X70_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEF2928101.1"
                     /translation="MKTQMLYAKEGIFTKEMEIVAQKEEVSKDFLLANIACGKIIIPA
                     NINHKSLDPNGIGLGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFGIEAIMDLSNYG
                     KTSRFRDELIAVSKAMIGTVPVYDAVGFLEKDLKQISARDFLDVVYHHAKSGVDFMTI
                     HAGINSRAARVFKESKRLTNIVSRGGSVLYAWMAMKEAENPFFEYYDDLLEICLKYDV
                     TLSLGDALRPGSTHDASDAAQISELIELSLLTQRAWEAGVQVMIEGPGHMAINEIEAN
                     MQIEKRICKGAPFYVLGPLVTDIGAGYDHISGAIGGAVAAAAGADILCYVTPAEHLRL
                     PNLNDVRDGIVATKIAAHAGDLAKLPKERKRDDEMSKARQDIDWEKMFKLAIDGEKAK
                     KMFNERRPDDLNSCSMCGKMCAMNTMNQVLKGENVSLV"
     regulatory      complement(29726..29830)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(29853..30614)
                     /locus_tag="R8X70_000288"
     CDS             complement(29853..30614)
                     /locus_tag="R8X70_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEF2928102.1"
                     /translation="MSLQQVDQIISILSKQSKPYEWVIKEFKKIEELKDYELDLETFE
                     LLGLGLTLDKNNIFTLQTRTKKIKEEIFCIVDIESTGGIKNGQILEIGAVKIKNLQEI
                     DRFSSLVQVKEIPENITELTGINLDMVKDAPSLTKVLNDFRLFLKDSIFVAHNVRFDY
                     GFISKALNECGFGILLNRRICTIEFAQCCIESPRYKLDVLKELLGIKNAHHRALNDAL
                     AAAEIFKHCLGKLPYHIKTTEELINFTKTSRIKQK"
     gene            complement(30611..31258)
                     /gene="rpe"
                     /locus_tag="R8X70_000289"
     CDS             complement(30611..31258)
                     /gene="rpe"
                     /locus_tag="R8X70_000289"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEF2928103.1"
                     /translation="MYVAPSLLSANFLKLEEEIKAIDEAGADLLHIDVMDGHFVPNLT
                     FGPCVIEKISTITEIPLDVHLMVKDVGKFVDLFIPIKPKFISFHIESEAHPIRLCEYI
                     RSQGIHPAIVLNPHTPINSIKHMIDFVDMVLLMSVNPGFGGQKFLPLVYDKIKELRRL
                     IDEKNAKVFIEVDGGVNGLNASDLEAAGADILVAGSYIFSSNDYKTSISSLKLEF"
     gene            31397..31591
                     /locus_tag="R8X70_000290"
     CDS             31397..31591
                     /locus_tag="R8X70_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEF2928104.1"
                     /translation="MARICQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TRKMRIAASTLRTLKKQNSK"
     gene            31788..32003
                     /locus_tag="R8X70_000291"
     CDS             31788..32003
                     /locus_tag="R8X70_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEF2928105.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFERHNELDDQIKDAEEGRNLLS
                     DIEISNLKKEKLHIKDQLNQYLANYKK"
     gene            32015..33109
                     /locus_tag="R8X70_000292"
     CDS             32015..33109
                     /locus_tag="R8X70_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HEF2928106.1"
                     /translation="MFGSKINHTELQDIKNENQNLTQQLEKIKAENLELKDKISLLEQ
                     EALESKLKTDLLNVLLGGVLKNITIVQSDMLENVNKAEIISNYSKTSLAEMDELNHIA
                     NSINASLGDITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISINSN
                     AHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFAKSGQE
                     LADHTSCRLGKWVASTGKERFGDSKSFIKINEPHQKVHENMNSAIRIANTEDVSLSNT
                     QDAIIKKCENAENASLHLFDVFKEMLNEAN"
     gene            complement(33130..33723)
                     /locus_tag="R8X70_000293"
     CDS             complement(33130..33723)
                     /locus_tag="R8X70_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEF2928107.1"
                     /translation="MIFKNLKELPFCESNYIKPKRFSYESNGKFCTWDFIESKDSVSI
                     LLYHKELKSFIFVRQFRIPLWYHQKQDKNYHKDENMGYTIELCSGLVDKDLPLEQIAK
                     EECIEELGYAPKEFEKVGDFYTGFGSGVSKQSFYFAIVDENDKICDGGGVDDEQIEAV
                     FVKINEYEEFSKKIIHTPLLDFAYLWFLKEKKELCLK"
     gene            complement(33800..35863)
                     /locus_tag="R8X70_000294"
     CDS             complement(33800..35863)
                     /locus_tag="R8X70_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEF2928108.1"
                     /translation="MNAKKLKLSILCFCLMGLGEIKAEEQYQLDDVVVSASGFEQDLV
                     DAPASISVITKEELSKKPIKDIGEAISDIPGVDVTMNKTGTYDFSIRGFGSSYTLVLI
                     DGKRQSVANGFYDNGFGGSESGYLPPASMIERIEVIRGPASTLYGSDAVGGVINIITK
                     KNPNKTEANIEFSTLLQQHSSKYGNAGGFNAYVATPLIEDTLSISARIKYYDKAASDL
                     KWPTPVWSNGTQRPENYQIASHSPGYFTSLGFGSRLNWTVDDSNNVYLDVERYINEIS
                     VNSTSSSAIKSERQLFKDNVVLNHDGNYEFGTTNSYLQYGSTKDKDLHSQIWVGEGKV
                     VLPWNLDKYGNLVSTFGTRIDYETLKNDQESAGSEIRGKNLDQTTVALYGEGEYFISD
                     DLIFTTGLRYIYSDLFDSEVTPRVYLVYHLNDNVAFKGGVAMGYKTPAAKQLTNGYYN
                     YSNNGASFGNPDLKPEESTNYELGVDFRIFDFAHYSITGFITDFKNQISSEELTGMYN
                     GIDCANGVTCERSINLGKTQTRGIELAFNTKPYKGFSVNSSYTFMDNRYKDGQTNWFG
                     GDRIENLPRHIAMLKLNYEQGKFSSYVKARARLDTIARSKGGGSGTLPWQKYKPFYIV
                     DLGVNYKIDKQSSLSFTVQNLFDKDFFDPQVTRWDGANPGGYANRYQDYTEGRSFWLS
                     YKYDF"
     gene            complement(36106..36939)
                     /locus_tag="R8X70_000295"
     CDS             complement(36106..36939)
                     /locus_tag="R8X70_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEF2928109.1"
                     /translation="MKAKSFLFVPSIFPERFTKALQSGASQIIIDLEDSVEVAKKEVG
                     RKNIVDFSSQCAKNNDKFLIRINETKSKEFQKDLSLISTIKESNGIIGVVLPKAQSYE
                     DIDMLSQFELPILPIIESALGVENLDDIARHPSVLALSFGSLDMTLDLNLQEGEGKNF
                     ILNSIRTQIVLKSTKYNLLSPINGVYPDIKNIDGLKEDLIFAKSMGFGGSLCIHPNQV
                     APINEVFSPSAKQIAWAKEILSLRQNSNDIIFNYNGMMVDLPVIKKAEQILLDSNSNL
                     S"
     gene            complement(36949..38121)
                     /locus_tag="R8X70_000296"
     CDS             complement(36949..38121)
                     /locus_tag="R8X70_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEF2928110.1"
                     /translation="MLPLEGKLVLSIEQAIAAPFCTRQLADLGARVIKIERPEVGDLA
                     RGYDKRVDGIASHFVWVNRSKESLAIDLKDPDGLEFIKTILPKVDIFVQNLAFGASKR
                     LGLDYENLKKYNPKIIVCDISGYGEGGNYGHKKAYDLLIQSESGLVSITGTQDECVKV
                     PISIADISAGMYAYSGILQALLYLEKTGKGSRVEISMLECMAEWMNYPLYYTYKNATP
                     PERKGAFHASITPYGPYKAKDGVVMFGLQNPREWESFCKIVLQDESLIEHEDFKNNTL
                     RTKNASKVKEIIEDAFKNLSAKEVVDRLDEAKIANGNVNELNQVWEHPQLKARNRWRE
                     VDSEVGKIPALLPPATNNNYEARMDKIPALGEHTESILKEFGFSDKINLFKEKKII"
     gene            complement(38134..38964)
                     /locus_tag="R8X70_000297"
     CDS             complement(38134..38964)
                     /locus_tag="R8X70_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928111.1"
                     /translation="MSYENFIGKQEKFTENINEKQVQKIVATLQSKQLKNGDALPYLW
                     QWCFFNEALTPDKLGRDGHPKLGLDKNSFFPSFGEVNRMWAGGRFNFIAPLIIGEDAT
                     KITTIKKIQEKQGKSGKLTFVTLEHCYYQKEQLKIEEEQDIVYKQPAPPKLTSDVVAM
                     NADYSEKMQPDSTLLFRYSALTFNGHKIHYDFPYATQVEGYHGLVIHGPLLATYMINC
                     FVKNHPDKQIINYSYRGMHALCVPDSFAVESKIIDNNTAEVWINKNGFVAHSGTIHFK
                     "
     gene            complement(38975..40270)
                     /locus_tag="R8X70_000298"
                     /pseudo
     CDS             complement(38975..40270)
                     /locus_tag="R8X70_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790444.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT        13282 a         7491 c         5557 g        14029 t
ORIGIN      
        1 gattaaaaaa catatgaaaa atataagaaa tttaacaaat caaacttgtc aaatgggaat
       61 tttaaaagaa gaaaatgtgc tctatttaga aaaaattgat gcaaataatc cagtacaatt
      121 aaaatctttc ataggcacct cttatcctgc ttatgcaact tctttaggca aggctttatt
      181 gtccaataaa aataaagaag aattaaaaaa aatttatcca aacaattttg aaaaaatcac
      241 agaaaataca ctaaaaaata tagatgaact ctatcaacaa atcgaacaaa ttaaaaaaga
      301 aaaaattgct attgaaagcg gagaaatcaa tccgcaaatt gaatgtatgg ctataggtat
      361 agaacataaa aacaaaataa ttgccgctat tagtatatct tatcttattt tctactctaa
      421 tgaaaccttc agagaaaaaa ataaaaaaat acttttagaa gaaaaaaata aaatagaaaa
      481 agccttaaaa attcatttca acgatttaga agaattatac taaaatagcc caaaaaaggg
      541 ctataagtta ttcttgttct ttaagtttta aattttgctc accataaagc cctgttccaa
      601 caggaatcat tctacctaaa ataacatttt cttttaagtc ttctaagtag tcaaatttac
      661 ccgcgatact tgcttcggta agtacttttg ttgtttcttg gaatgaagct gcagaaatca
      721 cactatcact gcctatcgct gctcttgtaa cacctaaaag tacaggttcg gcaatagctg
      781 gttctccgcc caatctaaga attcgctcat tttcttcacg gaatttgcgt cttgaaacca
      841 aatccccttc gataaattta gtatgtccac tattaataat tttaacctgt cttaacattt
      901 gagaaactat aacctcaata tgcttatcag aaataacaac cccttgacct cggtatactt
      961 gttgaatttc agaaatcaag taataatgca aggctttttc gcctaaaatt ttaagcacat
     1021 cgtgacttga aactactcca tcagttagct tttcacctgc gtgaataaat tcaccttctc
     1081 ttacttgaat atgttttgat ttatcgatca aatattctgc gcttgtgcca tcttctgctt
     1141 ggataatcaa tctttctttt gagcgtaaag gcttatcaaa atgaaccaca ccgtcaatct
     1201 ctgcaattac tgctgcattt tttggttttc ttgcttcaaa aagctctgaa acccttggaa
     1261 gacctccggt aatgtctttt gatttcgctg ctgcttttgg agtttttgcc aaaatatctg
     1321 cttgagaaat tttatcacca tcatgaacaa aaataaccgt ttttggctcc aactgataac
     1381 gcactgcttt atcaccttta cctgcaatta tcaaagtcgg tcttactccg cttggtaaat
     1441 actcattgat cactagcgaa cgcttgcctg ttgcctcatc gatttgctca tctgcactat
     1501 aacctgcttc tatatcttca aaacttacca caccatcaat ctctgcaatg atagtattat
     1561 tataagcatc ccattctgca ataactgact tttcttgttt tggcgcacta gcgattatag
     1621 aatcaaaatt aacctcttcg ctatcattaa attctattct tgattctctt gggatgtaat
     1681 gtctttttgc ctctctatca ttttcatcag caactacaac aaaaaatcct ttttctttta
     1741 ctatatcgcc ttttttaata tttctaaccc tatcaagtcc atcgccctta agaatataga
     1801 attttaaaat tcctttttcc cctgctttga tattttgcac aacaggatcc ccatctttta
     1861 caagaatttc acttgcaaat ggaatacggt ttggcacatt ccaaccctct ttaatcatct
     1921 caacaatact ttcattttct tcaacttcag caccgctttg atacggtaaa taaagctttc
     1981 catcaatgct tccgctaacg cccgctaatt catttggttt agcaagatcg tattttctaa
     2041 gaatatattt tgcttcttgt tttttatctt ttatagaaac aattacatct tcgtggatat
     2101 tttctatatt gataataccc ttaaatggtg ctttaatttt tggctctaca agtaaaatag
     2161 ccgcatttct acgattagcc actatgtctt ttccctcttt atttttataa gttttaagat
     2221 tataaaatct tataaaacct tctttttggg cgcttacctg tctatcttgt aaatctgtac
     2281 ttgcagttcc cccgctgtgg aaggttctaa gcgtaagctg agttcctggc tcaccgatag
     2341 attgagcaga gataataccc actgcctcac ctggcttaac aagcttgcct tcgccaagat
     2401 tgattccata acattttgca caaattcctt ttttagcttt acaagtgatt ggagtgcgaa
     2461 tatttacact ttttacaccg ctttctccta atattctagc tttttcttca tctattaagg
     2521 taccttctgt aaaaagtaca gaatttgtaa taggatcgat tacatcttca gctataaccc
     2581 tgcctaaaat tctttcttcc aaggtttcta taatagaact atctgcagtg atctcattga
     2641 tttcaacacc ctcatgtgtt ccacaatctt caacagtaat ttttacattt tgtgctacat
     2701 cgataagttt tcttgtcaaa taacctgcat ttgctgtttt aagagcggta tctgccaaac
     2761 cttttctagc cccgtgagtt gagataaaat actcaagaac attcaaacct tcacggaaat
     2821 ttgaaataat aggcgtttcg atgatcgaac catcaggctt agtcataagt cctctcatag
     2881 cagcaagctg agaaatttga gctgcactac ctctagcacc tgaatctgcc atcatataga
     2941 tagaattaaa gccttcctta tctttctcaa caagcttcat catatctctt gaaagagtat
     3001 tgttagtggt tttccaaata tcaataattt tgttatatct ttcacctgaa gtgatcaaac
     3061 caagattata agaattttga atttctctta cttgcttttt agcctcgtca atagcctttt
     3121 gtttatcatt aggaacgata atatcagcga tagatataga aatacctgcc ttagtcgcat
     3181 attcaaaacc taaattttta agtttatcta aaaagcttgc agtaatttgt aaaccacctt
     3241 gtttatatac atgatccaca agtgcagcaa tatctttctt ttttaaaacc ttattccaca
     3301 tattctcagt aacaaaatca ggcaaaatag atttaataat aagtcttcct gctgttgtag
     3361 taatctttct accatcaacc atagtttgaa tgctagcatg aatatcaagg catttacttt
     3421 caagggccat cattacttca tcaatgcctg tgcatatctt atgtgaacct tttgcaccca
     3481 ttttttccaa agaaagataa taaattccta aaaccatatc ttgagaaggt acagttacag
     3541 actttccact tgcaggcaaa agaatattca tagaagaaag cattaaaacc ttacattctg
     3601 cgatcgcttc ttgagaaagt ggcacatgca ccgccatttg gtcaccgtca aaatccgcgt
     3661 taaatgctgc acaaactaaa ggatggagtt gtattgcctt cccttcaact aaaacaggat
     3721 ggaaagcttg aatagaaagt ttatgtagag ttggagcacg gtttaacata acaggatgcc
     3781 cttttaccac ctcttctaaa cattcccaaa cctcattagt tttgttttct atcatttttt
     3841 tagcttgttt tactgtagtg gcataacctt tttcttcaag cttagccaat aaatgtggct
     3901 tgaaaagttc taaagccatt tttttaggta agccgcattg atccattcta agttttggtc
     3961 ctacaacaat aacgctacga cctgaaaaat ccaccctttt acctagcaag ttttgtctaa
     4021 aacgaccttg tttacctttg ataatttcac tcaaagattt taacgggcgt ttgtttgctc
     4081 ctttaactgc attagcacga cgaccattat caaaaagtgc atctacagct tcttgtagca
     4141 ttcttttttc atttctgata ataatttcag gcgcatcaag ctccataagt tttttaagac
     4201 gtgtatttct gttaataaca cggcggtata aatcatttac atcagaaact gcaaatttac
     4261 ccccatctaa agcaaccaaa ggacgcaaat caggtggcaa tacaggtaag tttgtaatca
     4321 tcatccattc aggacgattt ggtactgcat cttcgttatt tgtatttgca tttaaatttg
     4381 aatttaagaa gttttctaca acttttaaac gctttataat ggtttttttc ttagcttctg
     4441 aatttgtagc agccatttct tctttaagct gatttaaaag cgccacaaga tctaaatttg
     4501 ctagcaagtc acggactact tcgcccccca ttcttgcttt aaagccacta ttttcataac
     4561 gctgcatcaa attttgatat tgttcttcat ttaatacatc gcagtattct acttttttgg
     4621 tgctttcatt atcataatac gcatctcctg cattttccac gatataagcc tcataataaa
     4681 gtacgcgttc aagatccttc attttaacac ctagaagtgt tcctatacga cttggaagag
     4741 aattaacata ccaaatatga gctactgggg ttacaagttc aatatgcccc attctagagc
     4801 gacgaacttt tgaatttgca acttcaactc cacatttttc acacttaacg cctttaaagc
     4861 gcattttttt gtatttacca caaagacatt cataatctct aataggtcca aaaattttag
     4921 cgcaaaaaag cccatctctt tctggtttta aagttctata attaatagtc tctggctttt
     4981 ttacttcacc ataagaccaa gatttaattt tttcaggact tgcaagtcta agttgaaatg
     5041 cttcaaaatc cctaggtctt gcatcttctt ttatttctat tactttaaat ttactcatta
     5101 tcttcatcct tgtcaaaaat ctcaacatct aaagctagag acttaagctc attagtcaat
     5161 acaaaaaatg tctccggaat tcctgttgct gggacatttt ctcctttggt aagcgcttta
     5221 taagcactaa atctaccttc aacatcatcg gattttatag taagcatctc tcttaaggta
     5281 tgagccgctc cataagcttc aagcgcccaa acttccattt caccaaatct ttgtccacca
     5341 aagagtgctt taccgcccac aggctgctgg gtaaccaaac tataaggtcc agtacttcta
     5401 gcatgaactt tttcatcgac caaatggtga agttttagca tatacataca tcctacatga
     5461 actctctcag cgattttttc tccagtgcgc ccatcataaa gttctgtttt gccatccatg
     5521 tcaatctttg ctatttcaaa aagttttgca aactcttcta tattgactcc ctcgaaaaca
     5581 ggagttgcaa atttaacacc cttgctccaa tctcttgcgc aatttaaaag ctcttcatcg
     5641 cttaaatttt taataaattc tttttcattt acaagtcttg gaatagaaca tatttcaagc
     5701 atttttgctc ttaattcttt aacgaaatct ttttgttttc tgtcaaaaat ttcttgaatt
     5761 tgatcaccca gtctaagccc tacaagacct aagtggcttt ctaaaatttg ccctatattc
     5821 atacggcttg gaaccccaag tggattgagt gcaatatcca cactttttcc atttggcaaa
     5881 taaggcatat ccacttcagg tactatagta gaaactatac ctttgtttcc atggcgtcct
     5941 gccattttat cgcccacttt aagcttgcgt tttgttgcga tatacacctt aacaagctta
     6001 attactccac ttggtaagat atcatctttt tctaaaattt caagtttttc atcatgttca
     6061 gctttaagct ttttcttctc attttggaaa tgatttttta aatcatcgta ttctttttga
     6121 atctctttag aataagcttt aatcaaagtt gttaaagtaa aacgattgat tttttcaagt
     6181 tcgctaatat ctgcagtttg tcctttttta taatttttat ctccaatttt ttgatcgcta
     6241 tttaaagggg ctttggaaag aagagcacaa acacgaagca tttcttctct atccatcatc
     6301 aaaagtctat catgatgttc tttttctaaa gccatttttt ctttatcata agattttatt
     6361 gcgcgatcat ctttttcata gcctttttta gtgaaaattt taacatccac aacaacaccc
     6421 tctaaagaag cggttgcata aagggattta ttcacaacat gtcctgcttt ttctccaaaa
     6481 atcgctctta aaagtctttc ttcaggagtt ggtttaacct caccttttgg agaaacctta
     6541 cccaccaaaa tcatacctgg tttaatatgg gtaccaattt ttgcaatacc gctctcatca
     6601 agatgcgcaa catcttcttc ttttacattt ggaatatctt tggtaatttc ttctataccg
     6661 tcttttagtt ctcttgcttc aatttctttt tcgtaaatat gaacactagt aaaagtatct
     6721 tcgcgtataa ttctttcact tactactata gcatcctcat agttataacc attccaaggc
     6781 ataaaagcga ttaaagcatt tttacctata gcaagttcgc cttgatccat agaaggacca
     6841 tctgcgataa tttgtcctgc ttttactata tcaccttttt taacaatagg gtgttgaata
     6901 taatttgtat tttgattggt tcttaaattt ttctccatag tgtaatggtc aataaatgga
     6961 cctttatcat cttcacctaa aataaaaatg cttttattat ccactttctc aaccacaccg
     7021 ccacgctttg ctttaacagc ttcccaagca tcacgcgcaa taatttgttc catacctgtt
     7081 cctactatcg gagctgaagc agtaagaagt ggcacagctt gacgttgcat gtttgaaccc
     7141 attagcgctc tgtttgcatc atcgtgctct aaaaacggaa tcaaagaagc tgcaactcca
     7201 acaaccatac ctgagcaaag atcgattaat tgcacttctt cgcgtcttgc aagtatagtt
     7261 tcaccatctt gtctagcctc aacaaattct tctactatat tgcctttagc atcaacctta
     7321 gttgaagctg gtgcgataaa caagccttct tcttgtgtcg ctgtaagata aacaacttca
     7381 ttagtcactt taccatttgc aacttttcta tatggtgctt caacaaagcc aagttcattt
     7441 acttttgcat aagtagaaag agtgttaatc aaaccaatat tttgaccttc aggtgtttca
     7501 actggacaaa ttctaccata atgtgtcgag tgaacatcac gtacttcaaa acctgctctt
     7561 tcttttacaa gtccaccttc accaagcgct gataaacgac gcttatgagt aacctcgctt
     7621 aaagggttgg tttgatccat aaattgcgaa agctgacctc ctgtaaaaaa ttcaatgata
     7681 gttgtagtaa tcattttagg attgattaaa tcataaggca ttactttatc aagatccgca
     7741 tttaaagaag taaatttatc tctgatcgcc ttttgcattt ttgcaagacc taaatgaagt
     7801 tcattggcta aaagttcacc tatagaacgg atacgacgat ttcctaaatg atctctatca
     7861 tcaatatgtc ctttaccatt ttttacttta attaaatatt ttgcagtttt gataatgtct
     7921 tcattggtta gaactgttac atattctgga acttcaagtc ctagtttatg gttcattttc
     7981 atacgaccta ctttagtaag atcatatctt tcaggattaa aaaataaatc attaacaaag
     8041 gctttagccg catcttttac aacaggctca cctgggcgca ttactttata aattctaata
     8101 gctgctaaat cattttcatc atcgatattt tcactttgtt ttaataattt taaagtttca
     8161 ttatcttgtg caaatgaatt aataatagct gcatccactc catttgccaa gtcattagct
     8221 atttcaaaac ttttttgctc tttaatttta gcaagtttgc tttcatcaag taaggttaga
     8281 gagtcaaata aaacttcgcc actttcttta tcaataatag gattggctag ataacgattt
     8341 aacaaaattt ctactggata ttctatccat tttaagccat ctttaataag ctgttcggct
     8401 tttttcttgg ttaatctttt accggcttga tggataatat tacccttttc atccttgata
     8461 tcgtattcta ttctatccat aaaatcactt ggattaaatt ctgttaaaaa tttatctttt
     8521 ttaacgtgaa tagtctgaat aggataaaat aatttaataa tatcttgttt tttatatcct
     8581 aaagctctaa aaagcattgt tactggaact tttcttcttt tattaatcct tacatacaat
     8641 acatccttag catcatattc aaaataaagc caagaaccgc gatcaggaat aatttgagca
     8701 gtgtatacaa gcttattaac aacagtcgag ctttcttctt ctttgaagat tacgcctgga
     8761 cttctatgaa gctgattaac tacaactctt tcaaccccat tgataataaa agaaacccta
     8821 tctgtcatca atggaatttc tcttatataa atttcttgct ccttgatatc ttttatacca
     8881 actttttcac ctgttttctc atctttctca tgtaaggtaa gacggatttt catttttaaa
     8941 tttacagagt aagtcaaacc tctttccatg cactcacgaa ttgtgtattt tggttttcca
     9001 atttcgctac taacatactc aagacttaac ctattttgtg gatcatggat aggaaagatt
     9061 gatttaaata ctttttctat tccactttca ccattttcaa gatttaaaaa ataatcaaaa
     9121 cttgcttttt gaagttgaag aagatttgga atttctattt gctttgaaat attggagaaa
     9181 tctactctta aacgatttct taatttattg tctaacatat tgcatatacc tcgtggtaaa
     9241 ttttgtaaat ttaaaaaaga agacctaata tctaggtaaa aaataaaaaa gaagacttac
     9301 ttaaataagc aaatcttctt aaacttttaa agcttaatta cttaagttct actttagcac
     9361 cagcttcttc aagttgtttt ttagcttctt ctgcatcagc tttagccacg ccttctttta
     9421 aggttgaagg tgtttgctct actgcatctt ttgcttcttt aagtccaaga ccagttaaag
     9481 cacgaacgat tttaattact tcgatctttt tagcaccacc atcaactaaa atgatatcaa
     9541 attcagtttt ttcttcagct gcagctgctg caccacctgc tgctgcacca cctgctacca
     9601 ttacaggagc agcagataca ccaaattttt cttcaaattc ttttacaagc tcagaaagct
     9661 caagaacact taaatttgaa ataaattcta atacatcttc tttagaaatt gccatttttt
     9721 atcctttatt tattattcag attctttttt atttttaagc gcatttaaac caatagtgaa
     9781 attggtaatt ggcgcattcc aaacttgcaa aagcatagca agcaactcgt tgcgagaagg
     9841 catttttgcc aaagctctaa ccttagcaac atctgcaact tcgccttcaa tatgagcagt
     9901 tttaatttca aatttatcat tattttcttc aaatttagct gctacttttg aaacgctaag
     9961 ttgatcctcg ccccaaagat aaacattagt atctttaaga accagacctg ttttaccgga
    10021 attattaaga gcaatgttag ccaaagtgtt tttaataatt tgaactttta cattgttttc
    10081 tctcgcatta tttctaagtt cttcaagctt tttagtactc aagcctttgt aattacaaac
    10141 tacaattgct tcgctaattt taaattcttc ttgaagctta gcaataatct caactttttc
    10201 gcttctagtc acattttctc ctttccgact gagatttcaa gcagagtggt tttacccaaa
    10261 ttaagctttc gcctcgacta tcttcaatct aaaataaaca tctcaaaaaa taaaaatttt
    10321 ttcagatgtt tatttaaaaa gagttgcatt atagcaactc ttacttcata tcaagtaatt
    10381 cttgcgtttc aagttttaca gaaggactca ttgttaaaga caaagctgcg cttttaatat
    10441 atctaccttt agctgctgca ggtttatgtt tattaatcgc tttaataaaa gtagaaatat
    10501 tatcccaaag ttgctcttta gaaaaactta cttttccaag gcctgcatga atatttcctt
    10561 gtttgtctac acggaaattt acttgtccgc ttttagcatt attaactgct tgagctacat
    10621 ccatagtaac tgttccggtt tttggatttg gcattaaacc tttaggtcct aagattctac
    10681 ctactttacc cacaagaccc attaaattag gagttgcgat taatacatca aaattcatat
    10741 tgcctttttg aatttcttct atcaagtcat cacttcctac aatatctgct ccagcatttt
    10801 ttgcttcatc tgccttagca tcttttgcaa taacagctac acgaactttt ttacctgttc
    10861 cagcaggaag tacaacagaa cctctaacca tttgatctgc atgtcttgga tcaacattca
    10921 atttaagtgc gatttcaaca gtttcatcaa attttgcaga ttttaaattt cttactgttt
    10981 caattgcttc atttaaagca tactctttgc ttacatcaat tttttgtgat aattctttta
    11041 atcttttagt tattttagcc atatattttt ctccgcattt ttaaagtgct accgcttttt
    11101 accttagcgg taaaaggttt taatctacga tttcaacacc catagagcga gctgaacctg
    11161 caataatttt cgcagcttga tctctatcct tagtatttaa atctgcaatt tttttatcaa
    11221 caatttctaa aacttgggca cgagttaatt tacctacctt gttcttaagt ggattatctg
    11281 tacctttaga aattccagct gcttttttaa ttaaatctgt agcaggtggc tgttttgtaa
    11341 taaaagtaaa gcttttatca gcataaacag taataacaac aggaatatta aatcctgcca
    11401 tatcctttgt tctttcatta aaagctttac aaaattccat gatatttaca ccttgctgac
    11461 ccaaagcagg acctacaggt ggtgatggat tagcttttgt agctgcaatt tgcaatttaa
    11521 tttcgcctac gactttttta gccataacaa atctccttac ttgatataaa ttaaattatt
    11581 ttctcaactt gagaatacaa gatctctact ggagtagaac gtccaaaaat agaaacatta
    11641 agttttaata atccacgaac catatcgtat tcttctacta tagcagtaaa gtttgcaaat
    11701 ggaccttcag taattcttac attttctcct tcttcaaaag agattttagg ttttggagca
    11761 gcacgattat gcactttttc caaaattaaa ttaatatctt tttctgttaa aggagtaggt
    11821 ttttttgatt ctccaataaa acgaccaact tttggaagag attgaatgcg atgccaaagt
    11881 tctgtattta aatctagatg tgcaaaaaca tacccagaat acaaacttct ttcacttatc
    11941 ttctcttttc catttttaaa ttcaataaca tcttcagtcg gaacaactat ttcttttagt
    12001 tgctcttcga ttccattatc ttttactaaa ttttcaatgg ctcttttaac tgccatttcg
    12061 ctaccagcat aagtttggat tgcataccat ttatgagtac tcaaattttg ttctccttta
    12121 tacaatcgca gaaacaatag aggacataat ccaatccact aacgccaaaa acaaagaaat
    12181 aaccgcaacc actacaaaaa ctgtaatata agcatttctt acctgttctt ttaaaggaaa
    12241 aattactttc cttaattcgg cttttgataa tttaaaataa gttattaatt tttccattta
    12301 tttaaacctt aattatggca gggcaagagg gattcgaacc cccaaccatc ggatttggaa
    12361 tccggtgctc taccgttgga gctattgccc tagggcataa gcttaacttt ttagcttaac
    12421 ttctttgtga agtgtgtgtt tttttaatct tgggcaatat ttttttaatt ccaatttttc
    12481 tgtagtattt ttgccatttt tataggtgct ataattaata tcaccacatt cttcacattt
    12541 taaaccaact ttaattctca tttatatttt ccttaaaaaa tttaaagcca agtattaaac
    12601 ttggctttta aaattactta ataattttag aaacaacacc tgaaccaaca gttttaccac
    12661 cttcacggat agcaaaacga gtaccttctt caagcgctac tggtgcaatc aagcttacag
    12721 taattcttac attttcacca ggcataacca tttcaacgcc atcagctaat ttaatagaac
    12781 ctgttacatc tgttgttctt acatagaatt gcggtctata gttattaaag aatggagtat
    12841 gtctaccacc ctcatcttta tttaggatat aaacttcagc ttcgaaatca gtatgtggag
    12901 taattgattt tggtttagca agaaccatac cgcggataac ttcttctttt tttgtaccac
    12961 gaagaagaac accaacatta tcccctgctt caccttgatc catttctttt ctaaacattt
    13021 caacgccagt tacagttgtt gtttgagtat ctttaatacc aacgatttct atagtatcac
    13081 caacttttac aatacctttt tcaattctac ctgtaacaac agtaccacga cctgaaattg
    13141 agaaaacatc ttcaattggc attaagaaat ctttttcagt gtcacgagtt ggagttggaa
    13201 tatagctatc aacagcagcc ataagatcca taattttcgc tgaccattcg ccatcttgtc
    13261 cagcttttgc ttcttcaaga gcttttaaag cagaacctga aataataggt gtgtcatcac
    13321 ctgggaaatc ataagagctt aataattctc taatttccat ttcaaccaat tctaaaagtt
    13381 cagcatcatc aaccatatct gctttattca taaatacaac gatatatgga acacctactt
    13441 ggcgcgatag aaggatgtgc tctctagttt gtggcatagg accatcagct gcagaaacaa
    13501 caaggatagc accgtccatt tgagcagcac cagtgatcat gtttttaaca tagtcagcgt
    13561 gacctggaca atcaacgtgt gcatagtggc gattatctgt ttcatattca atatgagaag
    13621 ttgcaatagt gatacctctt tctttttctt caggagcgtt atcaatatta tcataatctt
    13681 taagttctgc caaacctctt cttgaaagaa cagcagaaat agcagctgtc aaagtagttt
    13741 taccgtggtc aacgtgacca atagtaccaa tgtttacatg tggcttatta cgtgaaaatt
    13801 tttctttagc cattttttcc tccatataaa aatttaacaa ggcaagtcta tatttataat
    13861 tttttcaatt ttatggagct catagcggga attgaacccg cgacctctcc cttaccaagg
    13921 gagtgctcta cctctgagcc atacgagcgc tcagaaaaat tatataaaaa catagacaac
    13981 taaaaaacaa ttttagggga tttactgtaa gttagaaaaa aaatacagct cccagtcaaa
    14041 ctttggagcg ggaaacggga ctcgaacccg cgaccctcag cttggaaggc tgatgctcta
    14101 gccaactgag ctactcccgc aaagcatggt ggtgagtcgt ggattcgaac cacggaaggc
    14161 gaaagccagc agatttacag tctgccctcg ttggccactt gagtaactca ccataaatga
    14221 aatattacat ctaagcttat tgtaatattc tggtcaaaca ctgctaaaat aatggagctg
    14281 gttaagggac ttgaaccccc gacctgctgc ttacaaggca gctgctctac caactgagct
    14341 aaaccagcaa ataatttaaa gatggtatta tatctgaaaa aaaatagttt gtcaagatta
    14401 tgcgctataa attatttaaa aaacaatttc ataattaaaa atttcccatt aaaaatacaa
    14461 aaactaagat tttttattga aatcatttat gatagtcaaa taaattaagg aatttcttag
    14521 ctctttcgct tttaggattt tcaaaaaaac catcaggagt attttcttcg ataatttctc
    14581 cattatccat aaaaattatt ctatcggcta ccgctcttgc aaatcccatc tcgtgagtga
    14641 ctataagcat agtcattcca tcttttgcca aatttaaaat tacctctaaa acttcacgaa
    14701 cgatttcagg atcaagtgct gctgtaacct catcaaaaag cataagctct ggattcatgc
    14761 aaagactgcg cactatagct attctttgtt tttgccctcc gcttaactct tttggataag
    14821 catcgatttt atgtgctaaa cctacttttt caagccaaat tttagcttct tgcaaaactt
    14881 cttctttagc tcttttttgt acttttaaag gacctaaaag tatgttatct ttcacgctta
    14941 aatgttcaaa tagctcgtat gattgaaata ccatacccac tttttgacgc actcttgtcc
    15001 aatctttaaa atttttatcg atcttatctt gtcctatttc tataacccca tctgcaattt
    15061 cctcaagccc attaatacaa cgcaaaagag tagattttcc gcaaccactt ggacctaaaa
    15121 tcaccaccac ttctttttgt tttacttcta agttgatatt ctttaaagca tgatgaaagc
    15181 cataatattt ttgcaaattt tttatcttta aaatactcat tttaactcca ttttttttct
    15241 aattttttag aatataaagt aacaggatag caaattaaaa aaaagataaa aaagattaga
    15301 ccataaataa taaatggtgc taaatcattt ttgttgttaa attcgatgat ttgctgcccc
    15361 acttttacaa gctctaccgc accgattaaa taagcaaaag ttgtactttt aatcatgcgt
    15421 gttaataaat tcatactcat aggtgttaaa cgacgcatag cttgaggaat gataatataa
    15481 aaataacttt gagctttatt taaaccaaga cttgctgcac tttcgtattg gtgtttagga
    15541 atgcttttta aagaagttct taccaaatcc atcatttcaa aacttcccca aatactaaaa
    15601 acaataatag ccgaacttac actgcttaaa tttataccca accatctaga aagtccaaaa
    15661 tataccataa aaagccatac tagtagcggc ataacacgaa caaattctaa agcaaaacga
    15721 cataaaatat aaatataacg atttttcaga ctcatcaaaa tacctaaaaa aagcccgcca
    15781 aaagaagtta taataatact tacaatagaa atttcaagtg tgatatacaa gcctttccaa
    15841 agtcgactta aagtatctgg atttaataga tcaaacattt gaaaaccttt tttccaaaaa
    15901 gaacaaaaac aaagaaatag gcagtatgat acataaatat cccaaaaaca aaagcaataa
    15961 aagctcatcc gttttataag taagtgaatt taaacccttc ataactgtga ctaaatccgg
    16021 caaagctata atgctcacaa cagaggtttc tttaataaga aaaacaatat ttgcgcttat
    16081 tcctggtaag caaaccccta aagcttgagg cattataaca taacgcaaat tattcaattt
    16141 agtaaaaccc aaagaaagac ctgcttcaaa ttgctgcttt ttaatggctt caaaaccagc
    16201 tctaaaactc tctgccatat aagaaccgcc caaaaaacta agccccacaa tagcacaagc
    16261 aaacgctgga cgcaaagcct catctacact taaacaaatc aaattcaaag gcggaatttg
    16321 ttctaaatga atatcaaatt taggcaaagc ataatacaag aaaaaaagct gtatcaataa
    16381 aggagtattg cgagaaaatt ctatataaac tttacaaaaa gcttccataa tcgttatttt
    16441 aaaataactc attaaaatac aaaaaaagcc tataattata gaaaaaataa taccaaaaaa
    16501 actaagtttt aaagtaagcc aagcagctgc aataaaagca tttgaattag ctagtataaa
    16561 atcaaaatcc attttattcc tattaccaaa gtcctttttt taaaccctct ttatctagga
    16621 tctcaatttt accctttttt gtctcaatta gctctgaatt tttaaattct tttagaattc
    16681 ttgacaaaga ttcagcacga acacttaaat ccactgcaat ttgtctttgc gaaatttgag
    16741 ccaaattctt ttcattttcc aaaagatatc ttgcaagttt actttttaaa tccaaagaat
    16801 tttctaataa ttttttttct aaaattttaa ttttttcaaa aagagatgaa ataagcaaga
    16861 aattaaattc tttattttgg ctgcacaggg tttcaaaatc ttcaaaatca atttctaaaa
    16921 tttcacaata ttcttcacaa atagcatttg ctggatatct caaacgctta aatgtaggca
    16981 tttcggctat aaaattaggc ggggtaaaat aatgcaaagt aatctctttt tcgcctgctg
    17041 tgcttttgta tacacgcact ctacctttta aaagaataaa aaattttaat gccttttcgc
    17101 cttcaaaaaa taaaatatta tttttttcaa attttcttat tttacctata ccctttaaaa
    17161 aatctaaata ctcttgcatt ataatattta acctatgtta attttatctc attttgtttg
    17221 tgctatatta acgataaatt tttatccaaa ggcaaacaca atgaaatatg aaactataaa
    17281 tcaagaaagt atagctaaac ttatggaact tttttatgac aaaataagaa aagataagga
    17341 tttagggcct atttttaaca atgccatagg aactagcgat gaagcttgga aagagcacaa
    17401 agcaaaaata gggaattttt gggcaggaat gttgctaggg gaaggtgatt atatcggaca
    17461 acctctaaaa aaacatcttg atttgcctcc ttttccgcaa gaattttttg gaatttggtt
    17521 aggacttttt gaagaaagtt tagataaaat ttacaataat gaagaaatga aaaatgttat
    17581 tttacagcgc gcacaaatga tagcctcgca ttttcaaaat atgctttatc gttttggtgg
    17641 acattaagat tatatttcca tcaaatcttt ttttgctttt tccaaaatgt attcatcttt
    17701 ggaaaaatca aaatatttaa attcatttcc atgctggata aatccatcga gcaaatctcc
    17761 actcaaacga tttttaagat caagttctgc gattttaaaa ccatctaaag tactagcaaa
    17821 ttcttttaaa cgacttggaa tttctttgag ttttgtataa agataacaag tgcttttaag
    17881 tccgacacgg cccacgcgtc cgcgaagttg atgcaaggta gcaaggccta agcgctccgc
    17941 tcctacaata acaatagtac taagccttgg caatgaaatt cctacttcta cgactgtggt
    18001 gcttaataaa atatttccct catcacgaaa ccgctccaaa atttcatcct tttgcttgtc
    18061 ttttccatgc gtaacaaaaa ctttttcata attatcctcc caatacctcc ttgcttgttc
    18121 taaagaaaga taaggaattt tatcgcttgg attgactaag ggatagatga tgatgatttg
    18181 atgattttgt gcgatttctt ctttgatttt ttcactaagc tttgcaaaac cttcattttg
    18241 tatacaaaga gtggtgatat cctttttaaa aggcatttcc ttgataaaac taaaatttaa
    18301 aagttctgat tgtatcatgc ttaaagttct tggaatggga gttgcagaaa attgtataaa
    18361 atgtggggct aattcatttt catttaaaga ataaatttgc tgacgctgtg cagagccaaa
    18421 gcgatgctgc tcatctatca ttacaagcac agcattatga ctttgaaggt gaatgagcgc
    18481 atgggttcct ataatcaaat tggctttttt aattttttct tccaaatctt tttctttttt
    18541 acccccttta ataaataaaa tatccacaaa ttcaggcaaa agcttttttg cctcttcata
    18601 gagttgattg gcaagtatgc tagtaggagc cattaagata gcttgttttg gatacaccat
    18661 caaagcagcg cccaacaaaa ccaaagtctt gccacagcct acatccccca taatcacccg
    18721 tcttttagct tctttagagc ccaaatcttg ctctatatcc tttaaagcat ttaattgatc
    18781 acgagtgggt gaaaagggta aattttttag ccaattggct atattgaaaa tttcaatttc
    18841 ataagcttta aagtgacttt ttttagcctt caagcgtttt aaaaaattgt aaatttcaat
    18901 atattttaaa tctttctcaa agcgctccaa attctcaaac atcaaaaaac ttttttcatc
    18961 ataagtgtgt aaatttaaaa gaaaatggat atatttatcc tcaatcccac tttcttttaa
    19021 attttcataa ttaagatatt tgtgtataaa ttcagaaatt tttttatctt gtaaaccttg
    19081 aatttgatat tttggagcaa aacctgcaaa agaagttaaa attttaggat tgttaaattg
    19141 ccaaacatgg ccaaaacgcg taagtttccc atttaaaata agttctttgc ctattttgca
    19201 aattccaaag tgccaagccc taggatgaaa aaacacaaag gaaatgtctt gactccactc
    19261 tttacaaaat cccaaaccaa agagctgacc tttttttgaa tgaatgcttt taatgattat
    19321 tttttgagtg catagctcat tttctttagg tgttttgctt ggacttaaat tttcgatttt
    19381 tttaggtaag ataagcgcta aatcaatcgc gcttttaatt tttaattttt taaaaaaatc
    19441 aaaatcattt tctttaattt tcatttgcaa tacttgcaaa atttaaatct aaaatttcat
    19501 tatgtttttg aatataagca tttagctctt gaagctctac tttttctata agctttaatt
    19561 cttctttata atatcctttt ggcaatccct gatagtactc attaaaactt atcgacaaac
    19621 gcctactaag actttcataa cgcaaaggag ttgaacctat gagaaaattt ttagcctgca
    19681 caagctcatt ttgactcact ccttctttta caaaatctct aaatacttct ttaactatct
    19741 ttttagcttc tttagcactt tcatttttag tttgcaaata accaaaaact ctagtaaaag
    19801 atgcattcat atcaagcata gcataagcag aatacgcaag ccctctttta acacgaattt
    19861 cttccattat ccttgatcca aaaccgcctt gacctaaaat aaatagtgcg atttttgcaa
    19921 gataaaaatc cttatcatta aattttgtaa aaaagggtgc agcaaagtaa atataggctt
    19981 gttcgctttc ttttctgatt tggattatgt ctttattttt tgagttaatt tcataagttt
    20041 tttgtgaatt ttgactgcct ttttgaagtt ttgctaataa tttatttaat aagcctttag
    20101 ccttttcttg ggctaaattc ccgcctaaaa tcactacaag attgcttaaa ttaatatttt
    20161 tcttataaaa actctccaag tcgcttaaag aaatttgctt gatacttttt tcatcgccat
    20221 catttggact ttgaaattct ttacattcaa aaatttcgct attaagcaaa ttttttgcta
    20281 aataatcaaa atcactattt ttactagcaa gctcacctag ggcattgatt tttaattttt
    20341 ctaaaatttt ttcttcaaat ctaggattta agagtaagtt ttctaagtgt tttaaagcaa
    20401 attcaaaatt ttctttcaag caagaaagat tgatttctaa actttcaaaa ccactacttg
    20461 cttccaaatt tacagcttta aattccaatt ctttaaaaaa gctatcatct acaccctcat
    20521 ttaaaattct tgcaaacatc tttgcaagtc ctgctatttc atcataactt cttccacagt
    20581 ttctaaaaac aagctttaag ataacaatag gaaaatcgtt attttcttca aaaataaaag
    20641 gaatttttac tccactaact tctaaattct gcattaaaac ctttctaaaa tttcataagc
    20701 tgtattacgc ttagcgggat tttcacctaa gcttttaatc agtcttatca tctcatcttg
    20761 attcattcta taactcgcac ctgcagcgct tacaacattt tcttccatca tggttgagcc
    20821 taaatcattg gccccaaatt ttaaagcaag ttgcccaatc aatgaacctt gtgttaccca
    20881 agaactttgt aaatttttaa aattatccaa ataaagtcta gccaaagcta aaagtcttaa
    20941 atatttgttt gaactttgct tcatgatttc aggatgtttt tggattaatg ctgtattttc
    21001 actttgaaaa ctccataaaa taaaagctct aaatcctcct gtttcatctt gtaattttct
    21061 taaatgctcg aagtgatcta taatctcctc atcactttca accgttccaa acatcatagt
    21121 agcagtgctt ttcataccga tttcatgcgc tcttctatgt acttctagcc aagtagcagt
    21181 atcgcattta ttaggcgcga taatatctcg cactctatcg cttaatacct cagcacccgc
    21241 tccaggtatt gaaaacaaac ctttagcttg aagtctttgt aaaacttcag aaattgaaat
    21301 tttagaagcc ttggcaatat aagcaatctc aactgcagaa aaaccatgca cggtaatatt
    21361 tggataatgc tccttaatcc acgaaacaag ctcttcatac cattctattt ttaatttagg
    21421 atgcaccccg ccttgaaaaa gaatttgcgt ccctccaata gcttcaagct cttcgatttt
    21481 tttaccaatt tcttcaaaac tcaaaatata agcgtcatct tctttatgat ggcgataaaa
    21541 agcacaaaaa gaacaatcta tgcaacaaac attggtgtag tttatatttc tatctacaac
    21601 aaaggtggtg attttttcgg gatgaagttc taattttctt tgataagcca tttctccaag
    21661 ttctactaaa tttgcattcc ttaacaaata aagagcttct tctttatcta atcttttcaa
    21721 gttatttcct taaatccatt tttagcttta ttatagcatt taaaaacata aattatgcta
    21781 tagtttcgct tatgaattat attgacttat tgaaaaataa taaaaatatt agaatactaa
    21841 ccttagtaca atttatcgtg tattttggcg cttggttttc ccaaacaggt gtttttactc
    21901 ttttagtaag ccttaacgct cctacttggg caacggctac aagcgctatg cttgcttttt
    21961 taccaggagt tttgcttgct cctattaatg gagttatagt agaaaaaaac aaacccaaaa
    22021 agcttttgtt aagtatgatt agcatagaac ttgtttctat tttctgcctt atctttgtaa
    22081 ccagtcttag catgctttgg cttttattta ttttaatttt tgttagactt tgcgtggctt
    22141 cgatttattt tcaagctgaa atgagcttgc tagctaaaat tttaaatcca aaagaactca
    22201 agcttgctaa tgagatgcat agtgtaattt gggcggtttc ttatacagca agtatggcaa
    22261 gtgcgggaat ttttatcaat ttctttggca ttaaagcggc ctttttgttt gattgttgtc
    22321 tgataattat tggaatttta tttttaacca aacttcatat tcctcatttt aaacaaaaaa
    22381 ttcaaaataa attttttatt ctgattaaag aaggtttttt atatgtttta caaaataaaa
    22441 ttatccttca tcttattata ttgcatgctt ttataggact taccgcttat gaaacactcg
    22501 taactttatt agcccaacac gaatacaaag aagttttatc cgctgctttg gttatagggt
    22561 ttttaaatgc aataagggct ttagctttag cttttggtcc tatttttcta agtaaaatca
    22621 caaacaataa aaatgtattt tttctatact taggtcaagg tttaggaatt atactttggg
    22681 ctttaaccca gtttaatttt tatatttcat ttataggcct tattgctgcg ggattttgta
    22741 cctcatccct ttgggcttat acttatacta tgattcagaa aaattgtgat aaaacttact
    22801 atggcagagt gattgcttat acagatatgg tttatcttag ctttagcgct cttatttctc
    22861 aactcatggg cttattgttt gaacaaggtt ttaagcttgc tataatcacg gctttacttg
    22921 gagtggtatt tatatttgcg gctttttatt ggagatggtt tgataagaaa tatttgtgaa
    22981 ttttacaaat tcacaaatta aaagattaaa ttttaaataa atcttgcaag tttttcaagg
    23041 cttcttcatt acttaaagta ttgcttgtgg tgcgagcatt cacttcatta agttcgattt
    23101 catatccact aagcataccc gcaagacgaa tattaatacc gctttttcca atggccttac
    23161 tcttttgctc gctgtttaaa gttacaattg ctttttcatt ttcaattttt acagaactca
    23221 ctatagcagg tgctaaagct cttgcgatta aaatttcagg ttcattgcta aattcaatac
    23281 aatctatatt ttcattatgt aattctttac tcacagcgtt gattctaacc ccttttacac
    23341 ctacagtagc tcccacagga tcaatatttg ccccatttgc ttgaagtata attttcgctc
    23401 tttctccagg aattctagcg catttaacta cgcttacata tccatcttta atttcaggca
    23461 cctctgcttc aagtaaacat tctaaaaatt tagggcttgt gcgacttagc tccattttaa
    23521 tacccttatc cgtataaaca cggcgtatca cagctttaac aacatcgccc actttaaatt
    23581 tttcaccctt gatgcgattt tttctaggta aaaaagctct tagctcatcg atttctatat
    23641 aggtattttc ctcattatca attcgcacaa catttccaaa aaccatttga ccgactttat
    23701 ttttatattt ttcaaaaatg gtttgctcaa gtagtttttg tatatggtat tctaattctt
    23761 tatgtaaaat atttacagct gttcttccta aattttctaa agaacattca taggtaagct
    23821 catcaccaat ttcaacatca ggtgcttctt ttttagcctt gctaaattca atataacttt
    23881 ctttattttc attcaatctt tcgtcattat cagccacaac tgtaattttt tgataaagat
    23941 ttaaattttt tctatctaca aaaaagtcat attcttgccc ataaattctt tttgctgtat
    24001 ttatcaaagc tataataact ttttctttca cgctttctat atctaaattt ttctcattcg
    24061 caatgctttc tataatgtct gcgattcttt ccataattat cgataccttt tcttttggga
    24121 tttttttaag aaagtagatt aaaagtatat ctttaataag tttaattaaa agtaaaattt
    24181 gataaaatta tagatttaaa agacgctaag gatataatat ggatttaaaa ttggcaagaa
    24241 atttaatcaa tgaagagcct aaaaatatta gtctagctaa aattgaagag gctgtaaatc
    24301 aagaaggaca aaagtttttt tattttgata aagaaaattc acacaaagat cttattgcct
    24361 tggttgaaca ctttgaaaaa aaaggcttaa gtgtttatca tagaactatc agatatggtt
    24421 tagatagtaa tgattttatg tatgaggttc atattctttg agctcgaaaa aactttttat
    24481 tcaaacctta ggctgtgcaa tgaatgtcag agattctgaa catatgatag cagaactgac
    24541 gcaaaaagat aattatactt taacagaaga tattaaagaa gcagatttga tacttatcaa
    24601 tacctgctct gtgcgtgaaa agcctgtgca taagcttttt tcagaagtgg gtggctttga
    24661 aaaggttaaa aaatcaggcg caaaaatagg agtttgtgga tgtacagctt ctcatttagg
    24721 gagtgaaatc tttcgtcgtg ctccttatgt ggattttgta ctaggagcta ggaatatttc
    24781 taaaattacc caagctgtta acactcctaa atttatgagc gttgatatag attatgatga
    24841 gagtgaattc gcttttgggg attttagaaa tagcatttat aaatcatata ttaatatctc
    24901 tataggttgt gataagcatt gtacttattg tatagttccc catacaaggg gagatgaaat
    24961 ttccattcct ttaaatatca tctataaaga agcacaaaaa gcagtagata aaggagctaa
    25021 ggaaattttc ctattaggac aaaatgtcaa taattatggt aaaagattta gaaatgaaca
    25081 caaaaaaatg gatttttcag atcttttaga agaacttagc accatagaag gattagagcg
    25141 catccgtttt acaagtcctc atcctctaca tatggacgat aaatttttag aagtatttgc
    25201 caaaaatcca aaagtttgta aatcaatgca tatgcctttg caaagtggct caagtcaaat
    25261 tttaaaagct atgaagcgtg gttacaccaa agaatggtat ctagataggg cattaaaatt
    25321 aagagaactt tgcccaaatg ttagcatatc cacagatatt attgttgcat ttccaggaga
    25381 aagcgataaa gactttgaag aaaccatgga agttttagaa aaagtacgct ttgaacaaat
    25441 gttttctttt aaatactcta aacgcccttt aaccaaagct gctaccatgc caaatcaaat
    25501 cgatgaagag atagcctcaa atcgacttag tactctacag gctcgtcata atgaaatttt
    25561 agacgatatt gttaaaaaac aagaaaataa aacttttaaa gttctttttg aagaattaag
    25621 agcaggcaat gctatcgtgg gtagaacaga taataatttt ctagtgcaag ttgaaggcag
    25681 cgaagagctc ttaggaactt ttaaagaagt aaaaattact aatgcaaagc gtatggtttt
    25741 atatggggaa atcatttaaa atagctttta tagcacgctt agttttcatt ctacaatggt
    25801 tgatttttct tacttgtaaa aaaatctaca aaggtgataa agttgatcaa atttctaatg
    25861 tgatactttt ttggcatggg cgtcttgccc ttatgccttt cgcatttagg cattttggca
    25921 aaaaaggaaa aaaagcttat gttatgatct ctcatcatag agatggggag caaattgcta
    25981 gaattatcaa attgtttgga ttagataccg tgcgtggaag cacttcaaaa ggagctagta
    26041 cagctcttcg aagtgctttt aaaattttag atgaaaatca tgatgtagtc attactcctg
    26101 atgggccacg cggaccttat catagcattt cagatggagc ggtattgctt gcacagaaaa
    26161 aaaatgttaa aataagaatt ttaaactatg aggcaagaaa tttttgggaa tttaaaagtt
    26221 gggataaaat gattttacct aagcctttta ctcatttagt ctataggctt agcgaaccct
    26281 tggatatttc aagtttagat aaagatcaag ctaaattttt tttacttgaa cattttaaaa
    26341 aaattgaaca aatggataaa ttttaaggaa taaaatgtta tttttactta aaaaaatatt
    26401 accacaactt ttcacaagta ttattttaga agataaaaaa aacatcctta aaacttctat
    26461 atataaaaat cacaaactta taagtagtaa tgaaaaaacc tttgataaga gtgaaaaatt
    26521 attagaatat gtaaaaacac tcaatagcaa atttttattt tatcacacag cattattttt
    26581 aaatgtcaaa gagcaaggtt tgattcctag taaaaacgac aaggattttg agcgttttaa
    26641 tgtaggtaaa atgagcttaa aatccatcgc tttaaataat gctttgatat acacagcaac
    26701 agaacacata gaatacttta atgaattgtt tgaagattat ggtggtttag attttttata
    26761 ctctcctttt gctatacttt atcataatat tttaaaagaa aaaccaaaca gcgataaaat
    26821 aactctttac gcctataagc atgagcatat tctaactctt ataatttgcc gaggtattga
    26881 aattttatat ggagatatca ttttctttga agaagaattg gatctagaat ttggacatca
    26941 agaagagaat ttagacaact taggcgaaga tacattaaat gatactgaag taacgcttga
    27001 taattttaat gaaaccctag aagataagct taacgctctt gatcaatttg ataatatttt
    27061 aggaaataat gagaatgatt cagagttttt ggatggcaaa gataaatttg atcttgaaga
    27121 aatggatcaa tttggaaacg acatagaact ttgtcgtcat attgttacaa gtattgaaaa
    27181 attttataaa gatgacaaat atccaagtgc gtttatcgat aaggctttaa tccttagcac
    27241 caaagagctt gatcaaagtg ctattgaatt tttagaagaa gaaactttac tggaaattga
    27301 gtctaagcca atcaatacct tagattcaat catagaactt atgcaaaagg agcttcagtg
    27361 aaaagctata gcttcataca atctagaaaa aaacctatct ttacactctt tgacaaaata
    27421 tggtttgggc tttttagttt tggtatagtt tttatttttg cggtatattt tctatatctt
    27481 actcaaatcg cattaacgca taattttata gaagagcaaa aagaacaagt tttgcaattt
    27541 caaaataaaa cacaagaaaa cggaaaatta tatgatattc ttctagaaca aagtaaaatt
    27601 gcaaatacct ttcacactca aaatcaagct ttcaaaaata gcttaaaaaa tctttttgat
    27661 ataatagtta aaaccgatgg aatcactctt gaaagtatag aacaagaaga aaattctcta
    27721 aaacttatag gagttacgcc aacaaaagaa atgtttgccc tacttttaga aacaccgcta
    27781 aaaagtattt ttgatcaaag ctttacaact tattatcgtt taaacaatgg ctggtatcgc
    27841 tttattagca taagtaaaca aaattcagga gttttacaat gaaagataaa agtcttgaag
    27901 aattaaatat tttaaagatt gttatttatg ttttaagctt tattactgta tgtactgctt
    27961 tgattttatt tttattattg cctgtgctga aagattacaa acaaacccat ttaagaaaaa
    28021 attcgcaagc agctatattt aatgcagcaa aagctaagct agatgctagt gaaaataaaa
    28081 taagcgcctt aagaacagaa aataataaaa gtctagagca atttgaacaa caattcaatc
    28141 tcacgcactt tcaaaatttt ttagaaaaat actttgaaaa tatccaaata acagaactta
    28201 aactagataa aaaagaaaaa tatcttaccc atagaatcaa catccgagca tcgataaata
    28261 atcctagacg cttatatgac ttcatagatg ccttagctca atataacaat cttgtaaaga
    28321 ttgattatcc catgacctta aaggctagtg atcatgggat aatgataaat cttaatgtgc
    28381 aaatttactc aaactagact tacattctcg ccttttaaga cctgattcat tgtattcata
    28441 gcacacattt ttccacacat agagcaggaa tttagatcat cggggcgtct ttcgttaaac
    28501 atttttttag ctttttcgcc atcaatggca agtttaaaca ttttctccca gtcgatatcc
    28561 tgtctcgcct tactcatctc atcatctctt tttctttctt ttggaagctt agctaaatcc
    28621 cctgcatgag ctgcaatctt agtagctact ataccatctc taacatcatt taaattaggc
    28681 aatcttaaat gttcagcagg agttacataa caaagtatat cagcacccgc agcagcagcc
    28741 acagcaccac cgatagctcc acttatatga tcatatccag caccaatatc cgtaactaaa
    28801 ggccctagaa cataaaaagg agcgcctttg caaatgcgtt tttcaatttg catattagct
    28861 tcaatctcat taattgccat atgtccaggt ccttctatca ttacttgaac acctgcttcc
    28921 cacgctcttt gagtgagtaa agataattcg ataagttcag aaatttgcgc tgcatcactt
    28981 gcatcatgtg tagatcctgg acgcaaagca tcacctaaag atagtgtcac atcgtatttt
    29041 aaacaaattt caagcaaatc atcatagtat tcaaaaaaag gattttcagc ttctttcata
    29101 gccatccacg cataaagtac tgatcctcct ctagaaacta tattagtaag tcttttgctt
    29161 tctttaaaaa ctctagccgc gcgcgaattt atacccgcat gtatagtcat aaaatcaacc
    29221 ccgctttttg catgatgata aaccacatct aaaaaatccc tagcgctgat ttgttttaga
    29281 tctttttcta aaaatcctac cgcatcataa actggaactg ttcctatcat agcttttgaa
    29341 actgcgataa gctcatctct aaaacgactt gttttgccat aattgcttaa atccataata
    29401 gcttcgattc caaatttgtg agcaagctct acttttttca tctcctcact ataatcaaca
    29461 caatcatttg aaacacctaa atttacattt accttagtgc gaagtccaag tcctatacca
    29521 tttggatcaa gacttttatg attgatatta gcagggatga taatcttacc acaagctata
    29581 tttgcaagca aaaaatcttt gcttacttct tctttttgag caacaatctc catttctttg
    29641 gtaaaaatac cttctttggc ataaagcatt tgagttttca tatttatcct ttgaaaaatt
    29701 tggataaatg agggtgcaag taaattgtag aaagtataaa tcttcccgac gctagcatta
    29761 tctagttccg gttcggtcta agcttttagc ttactctcag cctgtatcac aagctcccgt
    29821 catttatgtt ttaattatac tctttaaata ttttattttt gctttatgcg agaagtcttg
    29881 gtaaaattta taagttcttc agtggttttg atatgataag ggagtttgcc aagacaatgt
    29941 ttaaaaattt cagccgcagc caaagcgtcg tttaaagctc tatggtgggc attttttatc
    30001 cctaaaagct cttttaaaac atctaattta tatcttggac tttctataca gcattgcgca
    30061 aattctatgg tgcaaatacg acgattaagc aaaattccaa aaccacactc atttaaagcc
    30121 ttggaaataa aaccataatc aaaacgcaca ttatgtgcga caaaaatact gtcttttaaa
    30181 aaaagtctaa aatcatttaa aaccttagtc aaactcggtg catcttttac catgtctaaa
    30241 ttaattcctg taagttctgt aatattttca ggaatttctt ttacctgtac caaagagcta
    30301 aaacgatcga tttcttgcaa attttttatc ttaactgcac ctatttctaa aatttgtccg
    30361 tttttaatcc cgcctgtact ttctatatct acaatgcaaa aaatttcttc tttgatcttt
    30421 tttgtacgcg tttgcaaggt aaaaatatta tttttatcta gagttaaacc caaacccaaa
    30481 agctcgaaag tttctaaatc aagttcataa tcttttaatt cttcaatctt tttaaattct
    30541 ttaattaccc actcataggg cttactttgc ttacttaaga tagaaataat ctgatcaact
    30601 tgctgcaaac tcaaaattca agctttaaag atgaaattga agttttataa tcatttgaag
    30661 aaaaaatata acttccagcg actaaaatat ctgctcccgc agcttctaaa tcgcttgcat
    30721 ttaagccatt aaccccgcca tcaacctcta taaaaacctt agcatttttt tcatcgatca
    30781 gtcttcttaa ttctttgatt ttatcatata ctaaaggtaa aaatttttgt ccgccaaagc
    30841 caggattaac actcattaaa agcaccatat ctacaaagtc tatcatatgt tttatggaat
    30901 ttataggagt atgtggattt aaaacaatag caggatggat tccttgactt cttatatact
    30961 cgcaaagtcg tatagggtgg gcttcacttt ctatatgaaa agaaataaat ttaggcttga
    31021 tagggataaa aagatctaca aatttaccca catcttttac cattaaatgg acatctaaag
    31081 gtatttcggt aatggttgaa attttttcta ttacacaggg tccaaaggtt aaatttggaa
    31141 caaaatgccc gtccataaca tcaatgtgca aaagatcagc tcctgcttca tcaattgcct
    31201 taatctcttc ttctagtttt aaaaaattgg ccgataataa actcggagct acatacataa
    31261 gcttagcctc gttaaagtaa aaaattttaa agaaaaacat tttatctatt tataaattaa
    31321 aaatagtata aatatttgaa tattttaagc ttaaatttga taaaatcttg atttaaaatt
    31381 tccaaaggat gcaaatatgg caagaatatg tcaaatcaca ggtaagggac caatggtggg
    31441 taataatgtc agccatgcta acaataaaac aaaaagacgc tttttaccta atcttagaac
    31501 agttcgtgta accctagaag atggcactac aagaaaaatg agaattgctg cctctacttt
    31561 aagaacttta aaaaaacaaa actctaaata aactcttgag gattcgtcct caatgactta
    31621 aaaatcttca ttataattat ttaatttaac aaatcgctaa tttgtaacat atttaagatt
    31681 tattgaatta tttagcattt tttaagccaa aaatatcatt taattagtta taatgtaaca
    31741 tatcgtttaa tattttttaa attgtatcaa tttttaagga gaattttatg ttacatgaat
    31801 atcgtgaact tatgtcagag ttaaaaggaa aagatgcgca ttttgataaa ttatttgagc
    31861 gccataatga acttgacgat caaattaaag atgcagaaga aggaagaaat ttattaagtg
    31921 atattgaaat ttcaaatctt aaaaaagaaa aattacatat taaagatcag ttaaaccaat
    31981 atctagcaaa ctataaaaaa tagggtaaaa aaatatgttt ggaagtaaaa taaatcatac
    32041 agagcttcaa gatatcaaga atgaaaacca aaatcttact cagcagcttg agaaaatcaa
    32101 ggctgaaaat ttagagttaa aagataaaat ttcactctta gagcaagaag ctttagagtc
    32161 aaagttaaaa accgatcttt taaatgtatt attaggcggt gttttgaaaa atattaccat
    32221 agtccaaagt gatatgcttg aaaatgttaa taaagctgaa attatttcta attattccaa
    32281 aacttcacta gctgaaatgg atgaattaaa ccatatagcc aattctataa acgcttcttt
    32341 gggtgatatc acagagtcag ctaataaaac acgcgatgtt gcaggaactt tacatcgtag
    32401 cgttgatgag attacaaatg taattaacct tattaaagat gtatccgatc aaaccaatct
    32461 tttagcatta aatgctgcta tagaggctgc tagagcagga gaacatggta ggggttttgc
    32521 tgttgttgcg gatgaagtta gaaagttagc tgaaaaaact caaaaagcta caacagaagt
    32581 ggaaatgaat atcaatcttc taaaacaaaa tgcaaatgaa atgtataccc aaagtgagca
    32641 agtggaaaaa atttctatta attctaacgc acacattatg agtttttcag aaaaatttac
    32701 ccacttagtc aacgaagcac actctacaaa ttcgaatgct gtaggtattg cctcagaagc
    32761 atttgtatct ttggcaaaac ttgatcatat agcatttaaa cttaatggat ataaagaaat
    32821 ttttgcaaaa tctggacaag aattagccga tcatacaagt tgtcgtttag gtaaatgggt
    32881 agcaagtacc ggaaaagaaa gatttggcga tagcaaaagc tttataaaaa tcaatgagcc
    32941 acatcaaaaa gtacatgaaa atatgaatag cgctatccgc atcgcaaaca cagaagatgt
    33001 aagcttaagc aatactcaag atgcaattat caaaaaatgt gagaatgctg aaaatgcgtc
    33061 tttgcattta tttgatgtat ttaaagaaat gcttaatgaa gcaaattaat ccaaaattct
    33121 ttgccttatt tatttaaggc aaagttcttt cttttctttt aaaaaccaca aataagcaaa
    33181 atcaagcaaa ggtgtatgga ttatcttttt agaaaattct tcatattcat tgatctttac
    33241 aaaaacagcc tctatttgct cgtcatcaac cccgccacca tcacaaattt tgtcattctc
    33301 atctacaatt gcaaaataaa aactttgctt actaaccccc gaaccaaaac ctgtataaaa
    33361 gtcgcctact ttttcaaatt ctttaggggc atagcctaat tcttcgatgc attcttcttt
    33421 ggctatttgc tctaagggta aatctttatc tacaagccct gaacaaagtt ctatggtata
    33481 gcccatattt tcatctttat gatagttttt atcttgcttt tgatgatacc aaagcggtat
    33541 gcgaaattga cgaacaaaaa taaagctttt caattcttta tgatataaaa gaattgaaac
    33601 gctatctttg gattctataa aatcccaagt acaaaacttt ccattgctct cataactaaa
    33661 tcttttgggt ttaatataat tagactcgca aaaaggaagc tcttttaaat ttttaaatat
    33721 cataaaacaa agcctttatt ttttcttcat tatactttgt ttttacttgt tttaagttaa
    33781 gacactcttt tttttcaatt taaaaatcat atttataact taaccaaaaa cttcttcctt
    33841 ctgtataatc ttgatagcga tttgcataac ctcctggatt agcaccatcc catcttgtaa
    33901 cttgcggatc aaagaaatct ttatcaaaaa gattttgcac tgtaaagctc aaacttgatt
    33961 gtttatcgat tttataattt actcccaaat ccactatata aaaaggctta tatttttgcc
    34021 atggcaaagt gccactgcca ccaccttttg atctggctat agtatcaagt cttgcacgcg
    34081 ctttaacata agagctaaat tttccttgct cgtaatttaa ttttaacata gcaatatgtc
    34141 ttggtaaatt ttctattcta tctccaccaa accaatttgt ctgtccatcc ttgtagcgat
    34201 tatccataaa agtataactt gaattaacac taaaaccctt ataaggtttt gtattgaaag
    34261 ccaattctat acccctagtt tgtgttttac caagattgat agaacgttcg catgtaacac
    34321 cattggcaca atcaatacca ttgtacattc ctgttaactc ttcgctactg atttgatttt
    34381 taaaatcagt aataaatcct gtaatagaat aatgagcaaa atcaaatatt ctaaaatcaa
    34441 ctcctagctc ataatttgta ctttcttcag gttttaaatc aggatttcca aaagaagcac
    34501 cattattgct ataattataa taaccattgg tgagttgttt tgctgctgga gttttataac
    34561 ccatagctac acctccttta aaagcaacat tatcatttaa atgataaaca agatatactc
    34621 taggagttac ttcagaatca aacaaatcac tataaatata acgcaagcct gtagtaaaaa
    34681 tcaaatcatc actgataaaa tattcaccct cgccataaag tgcaaccgta gtttgatcaa
    34741 gatttttacc ccttatttcg ctacctgcac tttcttgatc gtttttgagt gtctcatagt
    34801 ctattcttgt tccaaaggta cttactaaat ttccatattt atccaaattc caaggcaaga
    34861 caacctttcc ttctcctacc caaatttgac tatgcagatc tttatcttta gtactaccat
    34921 actgtaagta tgaatttgta gttccaaatt cataatttcc atcatgattt aaaacgacat
    34981 tgtctttaaa caattgcctt tcgcttttaa tagcactact acttgtggaa tttactgaaa
    35041 tttcattgat ataacgctca acatctaaat aaacattatt gctatcatct acagtccaat
    35101 tcagtcttga tccaaaacct aaactcgtaa aatatccagg actatgactt gcgatttgat
    35161 aattttcagg tctttgagta ccattactcc aaactggcgt aggccatttt aaatcagaag
    35221 ctgccttatc ataatactta atcctagcag aaattgaaag cgtatcttca atcaaaggtg
    35281 tagccacata agcattaaaa ccacccgcat ttccatattt actagaatgc tgctgtaaaa
    35341 gggtgctaaa ttctatattc gcttcggttt tattgggatt ttttttagta atgatattta
    35401 ttaccccacc tactgcatcg ctaccataaa gtgtagaagc aggtccgcgt atcacctcga
    35461 tacgctctat catagatgcg ggtggtaaat atcctgattc gctaccgcca aaaccattat
    35521 cataaaaacc attagcaacg ctttgacgct ttccatcaat caaaaccaaa gtgtaagaac
    35581 ttccaaaacc tcgtatgcta aaatcataag taccggtttt attcatagta acatcaacac
    35641 ccgggatatc cgaaattgct tctcctatat ccttaatagg ctttttacta agctcttctt
    35701 tagtaataac agaaatacta gcaggcgcat ccactaagtc ttgttcaaaa ccacttgcac
    35761 tcactaccac atcatcaagt tggtattgtt cttctgcttt gatttcacct aatcccatca
    35821 aacaaaaaca taaaatgctt aatttaagct ttttagcatt cattatcctt tttcctttct
    35881 tgtattaggc tattatgata gttaaaatca attttgaagt atagataaaa atgactttaa
    35941 atttacttaa ctttgataat aattataaaa acaattttaa agcttaaaat ttgcacaaaa
    36001 catagctttt tagaaatatt ataagttatt ttaaagacaa gtaagaggat aaaatatctt
    36061 aaaaaaagta ttatatttat acacaaataa tttattcaaa tctccctatg agagatttga
    36121 attgctatct aacagaattt gttctgcttt cttaataacg ggtagatcca ccatcattcc
    36181 attgtagtta aaaataatat cattgctatt ttgcctaagt gataaaattt cttttgccca
    36241 tgcaatttgc ttggccgatg ggctaaaaac ttcattaatt ggtgcaactt ggtttggatg
    36301 aatgcacaaa gaccccccaa accccattga ttttgcaaat attaaatcct cttttaatcc
    36361 atcaatattt tttatatcag gataaactcc atttattggc gataaaagat tgtattttgt
    36421 gctttttaga acaatctgtg ttctaatgct atttaaaata aaattcttac cctcaccctc
    36481 ttgcaaattt aaatccaaag tcatatctaa acttccaaaa cttaatgcta aaacactcgg
    36541 atgcctagca atatcatcta aattttccac tcctaacgca ctttcaataa taggtaatat
    36601 aggaagttca aattggctaa gcatatctat atcctcataa ctttgcgctt ttggcaatac
    36661 aacgccaata atgccattag attctttaat agttgaaatt aaagacaaat ctttttgaaa
    36721 ttccttgctt tttgtttcat tgattcttat aagaaattta tcattatttt tagcacattg
    36781 gcttgaaaaa tctacaatat tttttcttcc aacttctttt tttgccactt caacagaatc
    36841 ctctaaatca ataataattt gactagcacc actttgcaaa gcttttgtaa atctttctgg
    36901 aaaaattgat ggaacaaata aaaaactttt ggctttcata taaaatcctt agataatctt
    36961 tttttctttg aataaattta tcttatcaga aaagccaaat tctttaagaa ttgattctgt
    37021 atgttctcca agagctggga ttttatccat tctagcttca taattgttat ttgtcgcagg
    37081 tggcaaaagt gcaggaattt ttccaacttc actatcaact tccctccaac gatttctagc
    37141 ttttagttgt ggatgctccc atacttgatt aagttcgtta acatttccat ttgcaatttt
    37201 tgcttcatca agacgatcta caacttcttt tgcactaagg tttttgaaag catcttcgat
    37261 tatttctttt acttttgatg catttttggt tcttaaggta ttatttttaa aatcttcatg
    37321 ctcgatcaat gattcatctt gcaatacaat tttacaaaaa ctttcccact ctcttggatt
    37381 ttgcaagcca aacattacaa ctccatcttt tgccttataa ggaccatatg gagtaatgct
    37441 tgcatgaaat gcaccctttc tctctggagg agtcgcattt ttataggtgt aataaagagg
    37501 ataattcatc cattcagcca tacattctag catggaaatt tctaccctag aaccctttcc
    37561 cgttttttct aagtataata atgcctgtaa aataccgcta taagcataca ttcctgcgga
    37621 aatatctgcg atactgattg gaacttttac acattcatct tgcgtacccg ttatagaaac
    37681 taagccgctt tctgattgta ttaaaagatc ataagccttt ttatgcccat aatttccacc
    37741 ttcgccatat ccagaaatat cgcaaactat aatctttggg ttatattttt ttagattttc
    37801 ataatctaat cccaatcttt tagatgctcc aaatgctaaa ttttgtacaa aaatatctac
    37861 ttttggtaaa atcgtcttga taaattcaag cccatcagga tcttttaaat caatagccaa
    37921 actttctttg ctacgattta cccatacaaa atgactagct atgccatcta ctcttttatc
    37981 atatcctctt gctaaatctc ccacttcagg tctttcgatt ttaataactc tagctcccaa
    38041 atctgccaat tgccttgtac aaaaaggtgc tgctattgct tgttctatac ttaaaactag
    38101 ttttccttct aaaggtaaca tctcttctcc tttttattta aaatgaatag tgccagaatg
    38161 tgccacaaat ccatttttat ttatccatac ttcagcagta ttgttgtcaa taatttttga
    38221 ctccacagca aaactatcag gaacacaaag cgcatgcata cctctataac tataattaat
    38281 aatttgttta tcaggatggt tttttacaaa acaattaatc atataagttg ccaataaagg
    38341 accatgtata actaaaccat gataaccctc aacttgcgtt gcataaggaa aatcatagtg
    38401 gatcttatgg ccattaaagg ttaaagcaga atagcgaaac aaaagcgtgg aatcaggttg
    38461 cattttttca gaataatctg cattcatagc aactacatcg ctcgtaagct ttggaggtgc
    38521 tggttgttta taaacaatat cctgttcttc ctcgattttt aactgctctt tttgataata
    38581 gcagtgctct aaggtaacaa aagtaagttt tccacttttt ccttgttttt cttgaatctt
    38641 ttttattgtg gttatttttg ttgcatcttc tccaataatc aaaggagcaa taaagttaaa
    38701 tctacctcct gcccacatac gattgacttc accaaagctt ggaaaaaagc tatttttatc
    38761 tagtcctagt ttaggatggc catctctgcc taatttatct ggagttagtg cttcattaaa
    38821 aaagcaccat tgccaaagat atggaagggc atcgccattt tttaattgct tagattgtag
    38881 cgttgcaaca attttttgca cctgtttttc attgatgttt tctgtaaatt tttcttgttt
    38941 tccaataaaa ttttcataac tcattttttt ctccttaatt taaaatacct aaaaataata
    39001 atacaaaacc aaatactacc aaaattaaag gcaatattat caatcttata aaaagatagc
    39061 gtttttcact ttcattttgt gcaccagcca aaaccaaggc tccgcctgtt gaaaaacttg
    39121 aatatccagt aaatgttgca aatactgcga ttatagaaaa tgcaagtgat ggctcaagtg
    39181 ctttgattga tggtacgata gagaaaaatg ttggcataac cacccccatg cttgaggcaa
    39241 acgcactcat acaagaagat aaaattccaa gcaaataata aagccaatta ctgctacttg
    39301 aaccgtgcgc actcataaat attgtgatat tttccattat gcctgttgtt ttactgagct
    39361 caataagcat agaaagtgat ccaatcatga aaatcaaatc ccaaggcaca ttcttaaatg
    39421 cttctttttc actaccaatt ccaaatatta ctgccaaaac gattccaaga aatgaaacaa
    39481 aaacagggtt aaaaatggaa gttacttttt ttagtgtttc atcatgagga tttaaagcaa
    39541 gaaaaaaaga tgggatcata ataaccgcaa aaacaaaaca cacaataaaa atccgtcttc
    39601 tattgtgcag cattgagtct ttttggtttt gtaatttgcg aagtaatttt caccttataa
    39661 ccttttagca aaaaatatcc gattataaaa atcaaaatat gtgcaataaa catattttta
    39721 cctaaattta attgcattat tgcagaagct tctgctgaat aaccaagttt ttcgataaga
    39781 tcaaaagtta ctctgccacc aagggtaaag ggattaaatc cacctgcaca ggaaccagaa
    39841 taaataataa tagctgctaa aatcttattc attttgattt tgctagcaat ataaagaacc
    39901 aaaggactca taaaagcaaa gcctgtataa tgtcctggtc caattcctac aaataccata
    39961 actgtaatat aaagtgcaat aggaatactc caaggtctat tcctaacaga atacacagct
    40021 tttaacggag attgtttagc gtaccatttg caatcgcaaa accataaaaa taagtaatag
    40081 aaagaagtat aaaaaataaa cttaaacttc cattccaaag attaatcacc ttttctggtg
    40141 ttataccgta aaggtatgcc ccaataaagg ctgaaagtat cgcgaagact ccgatatttg
    40201 ctttaagaac atagcccaaa gcaattgata ttatgaggga aaataaaata ataatattaa
    40261 tagtatccat catttagctc cttatcttga gtaattttaa gataattttc cactaacttc
    40321 caataaaaaa tacttaaatc ttatcaatta aatctttga
//
LOCUS       DAQUWA010000007        37083 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.007, whole genome shotgun sequence.
ACCESSION   DAQUWA010000007 DAQUWA010000000
VERSION     DAQUWA010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 37083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37083
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.007"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(249..1580)
                     /gene="fliI"
                     /locus_tag="R8X70_000299"
     CDS             complement(249..1580)
                     /gene="fliI"
                     /locus_tag="R8X70_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HEF2928112.1"
                     /translation="MNLEKLRSKLGKENLSAVFGEITKISATSIEIRGLKTGVGDIIK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGAIEATKYMPIMRASIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMGDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAIAKKEFMQKFLGQNPEESFEFEETIRLLSQIDANVAPNAMQ"
     gene            complement(1580..2182)
                     /gene="folE"
                     /locus_tag="R8X70_000300"
     CDS             complement(1580..2182)
                     /gene="folE"
                     /locus_tag="R8X70_000300"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEF2928113.1"
                     /translation="MSQEKNTENNLQEKFENCVKTMLEIMGENPTREGLVKTPNRVFK
                     AYEFLTSGYKKNVKEILNNALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRVHVAYIP
                     NQKVVGLSKIPRLVEVYARRLQIQEQLTEQIAEALMENVDAKGVGVVIEARHMCVEMR
                     GVQKANSTTTTSALRGLFLKNEKTREEFFSLINSPKQVRF"
     gene            2273..3598
                     /locus_tag="R8X70_000301"
     CDS             2273..3598
                     /locus_tag="R8X70_000301"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEF2928114.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKNVKMDGF
                     RPGKVPVAAVLKRYQKELTQDAEQNLFKSAVDSALKELKKEAKELVGEPYFEKFDRKD
                     GEIVAELALSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKEELLKRFATPEAIKTKR
                     ALKEGDFAKFDFEGFVDGKAFDGGKAENYVLEIGSKQFIPGFEEGMVGMKSGEEKDVK
                     VTFPKEYGAAHLAGKDAVFKVKLHEIQELKLPELDEGMLKNLLQNEEKPTVELLDEKL
                     KEQIKNEKLFKLVNDELKAKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFSDIFMPKTDKASKKEKEDK"
     gene            3598..4182
                     /gene="clpP"
                     /locus_tag="R8X70_000302"
     CDS             3598..4182
                     /gene="clpP"
                     /locus_tag="R8X70_000302"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEF2928115.1"
                     /translation="MYIPYVIEKTSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIV
                     AQLLFLEAEDPQKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFL
                     LSCGTEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKAILNDILAKNTKQK
                     VAKIVKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            4210..4737
                     /locus_tag="R8X70_000303"
     CDS             4210..4737
                     /locus_tag="R8X70_000303"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEF2928116.1"
                     /translation="MVRKIITYPNSRLFLNSEPVKQFDQELHTLLDDMYDTMIASQGV
                     GLAAIQVDIPLRALIVNILDENEEQKKEDLLEIINPQIIPLGEEKITCTEGCLSVPDF
                     FEEVERYNHILLKYQDRFGNFKELEAQGFLAVAIQHENDHLNGHLFIEKISFLKRQKF
                     DKEFKKKLKNQKKSK"
     gene            4734..6239
                     /locus_tag="R8X70_000304"
     CDS             4734..6239
                     /locus_tag="R8X70_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEF2928117.1"
                     /translation="MKKLKCVSFDENLDIIDVESTFTRGLPNLSIVGLANIAIKESIE
                     RIKATLLTCNFSFPAKKITINLSPSGIPKKGSHFDLVIATLILLQNEDFDDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSTKVKSAKVVVPKNIALKASMIPNLEIYGLEHLNEVIEF
                     FKEKNYEKFKFTQSHPLFANPLIIENEIFIKNHHFELDFKDIKGQEKAKRACLIAALG
                     MHNILFEGSPGSGKSMCAKRLVEIMPPQSLNEVLMQNAYMSLNSKDCEFTQKRALRHP
                     HHTSTRASIFGGGAKNAKIGEIALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHIS
                     RVNSKTTYETKFSFVAAQNPCPCGNLFSKNLSCVCSENEIKRYKNHISAPIMDRIDLY
                     VAMDEISKDDKSSINSKEMSERILKAFIFGKKRGQKEFNGKLNDTELQKFCILEKDAK
                     DTLDLAISRYNLSQRALNKILKVSRSIADFEEKELLSKNHILEALSFRMRS"
     gene            6241..6939
                     /locus_tag="R8X70_000305"
     CDS             6241..6939
                     /locus_tag="R8X70_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEF2928118.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEIIIKRIYGDWTQ
                     KNIQAWKEQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKDIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDQDENKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFNPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYENYY"
     gene            6923..8293
                     /locus_tag="R8X70_000306"
     CDS             6923..8293
                     /locus_tag="R8X70_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HEF2928119.1"
                     /translation="MKTITDDIKTLEQNAINKGLDELILMENAGLNLAKLIKKEAKKI
                     RKQYKIKKVKILFLLGGGNNAADGLVALRNLKHAKAYKLGFKENEIFKKQEQILKNFG
                     FKFAKKEPKFKKFHIVVDCILGTGTNREVDEKTKEILEKVNQSKALKIACDIPTNLGF
                     TPCFKADITQCMGALKEILLEDFAKEFVGKIKLANLGINAKKFSLDSKAFLLEEKDLK
                     TIERNTSSNKGNFGHIYIIASASAGTLAGLGALNFGSGLVSLVAKKSFSPLLMLKEKI
                     ENNASAIALGMGLENLDILKDEILQNIPLVLDANCFLSEAVLWYLSRKDVVITPHPKE
                     FIRLYKMCFDKDLSIEDLQRNRFFYAKKFAQNYDCVLVLKGANPIIIQKEKIFVVNLG
                     NEALAKGGSGDVLSGMIATLLGVKFSALEAAKNACLAHALVAKKYKFNKNSFDAIKLI
                     KGLKCL"
     gene            8284..8859
                     /gene="purN"
                     /locus_tag="R8X70_000307"
     CDS             8284..8859
                     /gene="purN"
                     /locus_tag="R8X70_000307"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEF2928120.1"
                     /translation="MLVKLAVLFSGNGSNLQNILEKLHKKTIGKNTYEVVLCLCNKKD
                     AYGIQRAKNFDLESVIIEHKDYKNREEFDEILVKKIKESGADLTILAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVNEELDGGKIIAQKAFEKQ
                     NLTFEEFEAKIHGLEHEILPLSVVEIFENCH"
     gene            complement(8997..9234)
                     /locus_tag="R8X70_000308"
                     /pseudo
     CDS             complement(8997..9234)
                     /locus_tag="R8X70_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778540.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(9400..10116)
                     /locus_tag="R8X70_000309"
     CDS             complement(9400..10116)
                     /locus_tag="R8X70_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEF2928121.1"
                     /translation="MRAARTCGANNNDFSILDYLFDEYGLSLKDPKYNFRFADMKYIK
                     EANDKYIVVRYMEDNPSIYKEALIYRYILKVRNPNPQIIQYLANHGAKFEVYREDTGW
                     SPIHFWASNNDYKFLELAIKGGANVDMEEYEFESIYKYQDTPLFEAVKESENYRTVQL
                     LIELGANVNFVPYLTTPLDQAEGARNRKLLKAAGAMTSDQLEKKFNIFYKDYEDRNEY
                     CDLLNEAIRKDKEKENLQKN"
     gene            10257..10997
                     /locus_tag="R8X70_000310"
     CDS             10257..10997
                     /locus_tag="R8X70_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEF2928122.1"
                     /translation="MFEWIFSAEMWIALATLIGLEIVLGIDNIIFIAILVGRLPKEKR
                     QRARIFGLSLAMITRLLLLLSLFWIMKLTTPLFSVFSQEISGRDIILILGGLFLIAKS
                     TLEIHHDIDNAGEKSDEEVLKEGAKRGFFSILIQIAVLDIVFSLDSVITAVGMVNNIE
                     IMMIAVVVAVFVMMLASKSISNFVDDNPTIKILALAFLILVGVTLVAEGLDFHISKTY
                     VYFAMAFSLGVESINIYIKKKRLAQEKS"
     gene            11047..11256
                     /locus_tag="R8X70_000311"
     CDS             11047..11256
                     /locus_tag="R8X70_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEF2928123.1"
                     /translation="MPKDANGTELNAGDSVSVIKDLKVKGASTTLKRGTTIKNIKLTS
                     KENEIEAKVDKFGVIVLKTEFLKKI"
     gene            11265..12449
                     /locus_tag="R8X70_000312"
     CDS             11265..12449
                     /locus_tag="R8X70_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEF2928124.1"
                     /translation="MRILLILRGNYYAGQEEFIKENRLKDYTLDLNSLRLLSGSVSKI
                     VSKYKNLNLKNDEELYKILLQFLEMRMQKGEFCIINAYNETLKVYKELAKQYRYDIYI
                     IDFKSSLEECLRKNEQKAKERGYIVSQSLLKKTHHLLERIPKKYTILNPNDWKKCLYQ
                     MPNLSKYRKIHHIGDIQGCFSILKEYLQELKDDECYIFLGDYIDRGIENGKVLKFLLK
                     ICERENVYLLEGNHERHLIKWANGELSSSKEFNENTLKDFRKEKLTPRDARKFYPYLK
                     ECLYYKFHEKQVFCSHGGVNLLPSKAYQISFMPSYDFIYGVGNYEESQKVASQFCEFT
                     KDNVYQIFGHRNRTKLPVQIEKRVFLCEGKVDDGGHLRIVTLDKKGFECIELKNKVYR
                     KK"
     gene            complement(12461..13822)
                     /locus_tag="R8X70_000313"
     CDS             complement(12461..13822)
                     /locus_tag="R8X70_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEF2928125.1"
                     /translation="MDPSQVLDLNQTLPTASFDAGYSILMVVIALALVLLNGFFVLSE
                     FSIVKVRRSKLEEMVKEKKVGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAI
                     AKMLEIPLANLGFNGVIIHTIAFIIAFSIITLLHVVLGELVPKSIAIAIADRAVLWVA
                     RPLHWFWILFLPCIKIFDFLAAMTLKLFGIKPAKESELTHSEEEIKIIASESQKGGVL
                     DEFETEIIRNAVDFSDTVAKEIMTPRKDMICLNKQKTYAENMQIICDHKHTRFPYIDG
                     SKDTILGMIHIRDIVQNELSDKSENLDTFVKPLILVPENISISKVLVMMNKERSHTAL
                     VIDEYGGTAGILTMEDIMEEIIGEIKSENEEDSYKKLAENIYEFQGRCDIETVEEMLL
                     ISYDEDLEQVTIGGYVFNLLGRLPVAGDRIEDELCYYEVKKMDGNSIERVKVVKKTNK
                     DEE"
     gene            13940..15067
                     /locus_tag="R8X70_000314"
     CDS             13940..15067
                     /locus_tag="R8X70_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2928126.1"
                     /translation="MLKILIIFCATLTLSIVYAPQPIAPLLSNYFHVNLHQISWIISV
                     TLIPLAVAPLVYGYLLEIFSLKKILVVSLFLCSIFGIIGNLNDNFYFFLFLRFLQALC
                     IPAILTALLTLLSRLESDNIQKNTAIYVGATTFGGFVGRVFGSFLSDLFSWHFALNFF
                     SILMMVCGFLFLFFKEHPISLNTQTSLRDFLPFVKELRFMVILFCVFTIFFSFQSIVS
                     FLPFHLKESIKDITQTQIGLVYLGFLTGVISSLLIGKTIEILGSKIRTAIFGFLVFIA
                     GCFCMIVGNFYFAFFAMFVFCSGMFISHCIFSGILNSIADKKGLANGIYLTFYYSGGA
                     LGSVLPSFYYESFGWEFLCIFTAFLLFIALIIFSKFRYFYK"
     gene            complement(15058..16272)
                     /locus_tag="R8X70_000315"
     CDS             complement(15058..16272)
                     /locus_tag="R8X70_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HEF2928127.1"
                     /translation="MFSSFFASKKWALWAYLGLFLLLFFLYMQTSLNVAINSWYSDFY
                     NVLQKPKIELLDSNTTQKAEEKFENNASLIQEANQKAQENFQKANIINKGALYYYQSL
                     LEYFFNSRAMIEKESYSASDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREAMT
                     FSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIRALMTLVAFIPILWTLSD
                     VVSKALFANLSENSSFYFLKNIDGLLVYVALLISLGGLIVSWFVGIKLPGLEYNNQKA
                     EAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMIVI
                     VPFLIMAPGLFAGAIGLGIVMQINNAFNQVRSSFSVFITNWTTITQLRSIYKRLKEFE
                     KNIEYAKNKNHL"
     gene            complement(16328..17074)
                     /locus_tag="R8X70_000316"
     CDS             complement(16328..17074)
                     /locus_tag="R8X70_000316"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEF2928128.1"
                     /translation="MKSGMIFGFVLSLILHALVLIFFLFSFYTQEKSSGVDFKQGLEF
                     ASIMMVSELPIGELKEVSIDQKKSNSQDKNKKQDEKMSLNSQDKNAVLKAQKKIEKQD
                     ENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQIKSYQALLMAHLAK
                     FKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCPYAVLNDEVLSLFKRASPLP
                     KPPKEMLKDGEKISFVMPIDYNIKDYLGKK"
     gene            complement(17077..17487)
                     /locus_tag="R8X70_000317"
     CDS             complement(17077..17487)
                     /locus_tag="R8X70_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEF2928129.1"
                     /translation="MIKTEMAHKEEELSEINITPFIDIMLVLLIVFMAVTPLITSSIK
                     IELPKSSQQAEDKLKNPIILYLNTDNTLAINDDKLSLENLSSALDIKTKGNKEEIIYF
                     HIDKSVKYEDIMQVMQKLKENGYGKIALSSKKVD"
     gene            complement(17474..18223)
                     /locus_tag="R8X70_000318"
     CDS             complement(17474..18223)
                     /locus_tag="R8X70_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEF2928130.1"
                     /translation="MLKKMFLFCFLLLNLNATDTNLSFDSSKIETKAPKIELSLSSLY
                     QNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDSSIQKIKELKNLNELDQT
                     KDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITASKNGLSLLASIGASA
                     PFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLIAAIPAVLFYNYL
                     TRKNLKLMHHLDELANFVYILFHRSYFNDKN"
     gene            complement(18235..20511)
                     /locus_tag="R8X70_000319"
     CDS             complement(18235..20511)
                     /locus_tag="R8X70_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEF2928131.1"
                     /translation="MKKLSLFCVMGLCFANFAFSEELEFDSLEISGSKIKNDEKPFVT
                     PGATSTRDNLNSNTQSIDSIVRSVPGAYTQVDQAQGGVSVNIRGMTGLGRVNTQIDGV
                     TQTFFGSASDDSFHGQIGTSSFTAPIDKNFLVALDINRGTFSGANGVNALMGSANFRT
                     IGVDDIVQEGRVFGFLGKYSYGSNAIGPNFMGAIAGKTMLENNANLGILFAYSGQNVS
                     QNYKIGGGGYIGDQKPPFDTDDDGIPDDNLAAPINPNNLYNQPRSQLFKVEYKSDISE
                     AILNYRAYNNNLAGRKITNDTYQIDYRLNPDSNLLDLKFLFAYNDGKQKYNQDKTWGY
                     HNMSGIKTKNRAVTFDLSNTMNKEFSQDSNLYFTYGVNILNNHYSNDFPQDRVLLPYI
                     LTSFYPKGKQDIKTFYLDTSFTKGIFTLNSNVNWINAQLSGYKGVCSMVNPYCQPKNA
                     TNLEKDYNNFNYSLMLSADIHPLFNPFISYSKSHRIPNVQEYFFTHDAGLEHNMNTFL
                     RAESANTYQIGFNSFAHEILNNNDTLGFKVLYYDTKVKNYIYNRRYWQKADNAIFIMQ
                     LNDDEKAKFHGVELEFKYDTGFFYSILSYTYQKSKHKFSDTESLETGGAQSGQSQFAQ
                     LPEHYANLDMGVRLFEEKLTLGALAKYTGKAKRVAPVGSLEDDPSNPDAIAPLKTTDE
                     LPKIPTIVDLYANYKILKNFTIKAEIQNLFDKNYMDALYTYNTGDSQNAGGLFNPIYI
                     YNNSARGRTFIVSFEYKY"
     gene            complement(20521..21321)
                     /locus_tag="R8X70_000320"
     CDS             complement(20521..21321)
                     /locus_tag="R8X70_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HEF2928132.1"
                     /translation="MLSACAVLQKSPPLQENKDFYILDTHTQKKISFEDMILELLKAD
                     VILLGEKHDEAKHKISQVMIFNALEGNLSSQNISFDVALEMLASTEQNHLDKAFKNKK
                     TIKTNELTNALNWDKGWKWKDYDQFVNAVFYSRAKILGANLSRSEITSIYNGVQPLKG
                     YVSTTNEVKKQIFDIISLSHKLNPQENKELLDKLVEIQQFKDRRMADVLVHHTNKVLL
                     LAGSYHTSKKIGIPLHIQDFKSDKKIVVVNLNYGERDLKDSDYTFIYY"
     gene            21347..21691
                     /gene="yidD"
                     /locus_tag="R8X70_000321"
     CDS             21347..21691
                     /gene="yidD"
                     /locus_tag="R8X70_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEF2928133.1"
                     /translation="MVCLKTLRFYQKFLSPLKPPVCRYYPTCSEYAFWQFQKRNCILA
                     FFSSFFRILKCNPFFKGGFDYPKITKNITSCNLCFKPIFLAQKQLYFLYIPHHQDKSF
                     YLVKIIFQRTNK"
     gene            21688..23283
                     /gene="yidC"
                     /locus_tag="R8X70_000322"
     CDS             21688..23283
                     /gene="yidC"
                     /locus_tag="R8X70_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEF2928134.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQQIKLEQNIT
                     TTQADSQNATNINAPQQNPQANLNVAATSNTIPQDKIIADIKSEHFEAQIDSLGRIVN
                     FYLQDKKYQNEKGEAINLISKGNLPYPLEMRFSDPAINTQAFSVPYAADMSEVFIDEN
                     GSKTLKLTQQLSDLIVEKKITFYSKGNYDIEVKLSKNINYFISPGYRPSIAVDSYTVH
                     GALVMDDQETIHTYEDGDMDKDENIKNAWMTSAFDRYYAAFFYNFEKPLNVTISKDAQ
                     NNPLVFAMSDNEFKAGGYMGPKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLH
                     NHIGNWGWAIVIMVLIIRIILFPLTYKSMISMNKLKDLAPKMKELRERYKGDPQKMNM
                     HMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPY
                     FILPILMGVTMFIQQLITPMTIQDPMQAKIMKFLPIIFTFFFITFPAGLTLYWFVNNL
                     CSLVQQWVINKMFAKEHHKKQAE"
     gene            23288..24139
                     /locus_tag="R8X70_000323"
     CDS             23288..24139
                     /locus_tag="R8X70_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HEF2928135.1"
                     /translation="MRIEAKDLQSALTEASKSLECSVIDLEYEIIQYSKNGFLGFWRK
                     NAIIEARAKKQPYSKKNSRKDFNASKNDVHRNYEKPYRKFDDRSKIDNKKEFEVEARE
                     VKPKEKYVVKSDGIFDSFHKESGGTRNKEDILDEIRIQLENLLKATCFNISLVELRMY
                     DEESVFIRLDGDDAALLIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQG
                     MQIYLQGVIEKVKINGRGQTKPLDGVLIKIALEKLRAEFPNKYVGIKQNNDQRYVVIN
                     DFFKKDE"
     gene            24132..25460
                     /gene="mnmE"
                     /locus_tag="R8X70_000324"
     CDS             24132..25460
                     /gene="mnmE"
                     /locus_tag="R8X70_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEF2928136.1"
                     /translation="MNDTIVAIATAHGVSSISIIRLSGERALEIALKLSKKNELCPRY
                     ATFTKLFNQKNEFLDEAIVIYFKAPFSFTGEDIVEFQVHGGFSVSEILLEELISLGAR
                     LAEPGEFSKRACLRGKMSPLKALNIQDLILAKSANAAKIIARNMQGSLGELLDKIRTD
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIA
                     IVGKPNVGKSSLLNALLSYKRAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESK
                     DEIEQIGIELSKKSIEDADIILAIFDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDL
                     KTQFDKPCDIDFIELSVQNDIQILKEKLEKYLNSLDSDGFLVSSIALINACKISSEAI
                     LRAKELLSENSLELFAFELNLAIGELAKFTKDFDRNEILDEMFGNFCLGK"
     gene            25471..27657
                     /gene="purL"
                     /locus_tag="R8X70_000325"
     CDS             25471..27657
                     /gene="purL"
                     /locus_tag="R8X70_000325"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEF2928137.1"
                     /translation="MDKETIKAHKISDEEYEQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGDIHDGKCGKHQKYLVKGVVSGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGICKSEDIFYAKAEGIGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDQTPMRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWN
                     LDAVVMGEVTDTGKMELFWHDELVGLIPIDPLSEKAPILDRPVSKPKYLNEIKDYNFT
                     LKMSQQELFEKMLKNENINNKAFIYDQFDSSVQTNTIKADGALGASVIRIKENGASVA
                     MAIECNSRLNYVNPKIGAALAVASAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKEACKELNTPVVSGNVSLYNETEGVSIFPSPTIVNVGVLEDANKTLKANFEK
                     ENTIVYLLGESFGEFAASMAMKIQDKKVAGSLKELDYKAELALWNLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSMGANLNSGFSDEKMIFDESASRAIVGLDKENEEAFLK
                     LAHELGVKATKLGFSTKEQSFKLDSINLSKDELNKLYFDSFKEQIQ"
     gene            27654..28424
                     /locus_tag="R8X70_000326"
     CDS             27654..28424
                     /locus_tag="R8X70_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HEF2928138.1"
                     /translation="MIFVLIILTILVFYWYYKTWGKQDFLNSATRGAKGFAKGFARGV
                     MEERIDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMISQILDANAKDERERAFLKAS
                     FNEHKENIHDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALVDADFSAKKREILEQIA
                     KAFDIAKSELDNFIASISNLKSTKKELSLDEAYRILELSNNADLNAVKKQYRALAKKY
                     HPDILNANNVSEEELKKGVEKFQKINEAYEKIKKHLEK"
     gene            28540..30072
                     /gene="purH"
                     /locus_tag="R8X70_000327"
     CDS             28540..30072
                     /gene="purH"
                     /locus_tag="R8X70_000327"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEF2928139.1"
                     /translation="MRALLSVSDKEGIVEFGKELENLGFELLSTGGTFKLLKENGVKV
                     VEVSEFTKSPELFEGRVKTLHPKIHGGILHKRSDESHIKQAKENGILGIDLVCVNLYP
                     FKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKTIEALKKGEND
                     EKFRLNLMIKAYEHTANYDAYIANYMNERFNRGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFSTNFKALKGEASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIK
                     ENLVQSYIHALKCDSISAYGGVVAVNGTLDEALANKINEIYVEVIIAANVDEKALAVF
                     EGKKRIKIFTQESPYLIRSFDSYDFKHIDGGFVYQNSDEVGEDELKNAKLVSQREASQ
                     VEIQDLEIAMKVATLTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIVKAQEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVIQAANEYGIALYFTGVRHF
                     LH"
     gene            30167..31759
                     /locus_tag="R8X70_000328"
     CDS             30167..31759
                     /locus_tag="R8X70_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEF2928140.1"
                     /translation="MFRTIGFKVSAAIFVVLVLSFIAMQLILNLDFKNTADKMSKSNL
                     NTVSSSVFQTMRMAMNLGDPEKIQEAIEDAKTIEGISDIKIYPSKETIELFEIKNPKI
                     SQEKLIIDQFTQPNLISLEQKLDNINHLRLIRPLIADESCIACHANANLGSVLGVMDV
                     YHSLENIEKDIAKTSRSYIVIFTIALIFTLVVVLFVLKMVVGNPIMELLSHAKELAQG
                     SGNLRARIRVKGRDEIAKACEYINQFIEKTQKTVSSASLNSKNVEKQSILLNSNAIEL
                     NEISTSSHQKIDSSFKLGVDIGADLDEISNLSSDANKANDKSYQLLDQMIHSLLEIDK
                     KVSDLVQNENNLALKIENMVKYAQNIQKATQMMGEIADKTNLLSLNAGIESARAGSYG
                     KGFSVIAEDIRALANNSEEFLHNVELIIKELLESIQEVTKELKENSHSIFSLNENTHL
                     LASNANEVKLCNQNSKNLVTQCTQRIKISQENIQNLLIHMRENVEASGKNEEISKILL
                     QVADELKIVCHNLESELSQFQI"
     gene            31769..32206
                     /locus_tag="R8X70_000329"
     CDS             31769..32206
                     /locus_tag="R8X70_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEF2928141.1"
                     /translation="MKKTLQIVLAAAFFAGCASTSVNSKSTSKISNEFMQNQLFEIDK
                     IVVNGKTFDPKNAEENPNISFENNKFYGYAGCNRFFGSYQSNENTLEIQGDRVASTQM
                     LCHPLDVMEFENAFLSNFKGSFTISNKNGKLILNNGEMEIFFK"
     gene            32303..33280
                     /locus_tag="R8X70_000330"
     CDS             32303..33280
                     /locus_tag="R8X70_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEF2928142.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHEKSDWKPYLGEIIQAYKDFVKAAS
                     EFQKVLLIAPSKSDFAPFENIANVEFFVCDTNDTWIRDFGAIDILEDNRLKALDFTFN
                     AWGNKFQSELDNEVNSKLFKEKFNEKLTKIDFILEGGSIDFNGEGVMLTSSNCLLNEN
                     RNSHLDKSQIEAKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHSICE
                     DEKDEHYIPLQKMKKELEATGFNLVELPLPKPLYYEERRLGATYANFVFVNDALIMPF
                     YKDENDEIIRQRLAKALPKRKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            33277..34164
                     /locus_tag="R8X70_000331"
     CDS             33277..34164
                     /locus_tag="R8X70_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEF2928143.1"
                     /translation="MNLQKKATLIASLCAIVLALIKFVVGITSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVSVGIFIFYESILKIYY
                     KEEIINLNASIYVMIFALILTFLLVLFLNHVVKKTKSLIIESDALHYKTDCLTNAFTL
                     AALVLIYFTNLHIIDAIFGIVVSLYTAFSAFKIIKKALAFLMDEALPKEQVNQICALI
                     SSNPEVISYHELKTRKTPNCNYLSVHLVFCPIISLLSAHKVSDEIENGVREMFNGEKW
                     DIQIHLDPYDDEEQERQRQ"
     gene            34161..35033
                     /locus_tag="R8X70_000332"
     CDS             34161..35033
                     /locus_tag="R8X70_000332"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HEF2928144.1"
                     /translation="MKIALIQQKFHFTKEKTIEKTCEFIEQAAKQGAELVCLGELHQS
                     EYFCQSENVDFFDLANDYEKDVQFWSSIAKKHGVVLLTSLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLVCWDQWYPEAARL
                     MALKGAQILIYPTAIGWFDKDEKEEKQRQLGAWLGVQKGHAIANGLYTIAVNRVGFEE
                     DKSGVEEGIRFWGNSFVFGPQGEEICILDSENECIKLVDIDLQRSENVRRWWPFLRDR
                     RIEYFGDLSKRFID"
     gene            complement(35070..36434)
                     /locus_tag="R8X70_000333"
     CDS             complement(35070..36434)
                     /locus_tag="R8X70_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEF2928145.1"
                     /translation="MKIWLYPCLTALFFTACSIKETKLSPAPSQTILNFKDQQDSHYA
                     KLEFDQNISILSKMNQNINFDSQKYKQLFFSPWHSSFKTLKNQNLFWSFSLYTNPKNT
                     YYFFNKQVIPLSWFEKTIDNANTKELGKFDKKALVIQNTLIKNIPTQRAILKNPFLEN
                     EGIPFDYASDSILNAGTPILVSHFSKDKRYAFVLSEAGVGFIESKDLEFFSNNRAQIY
                     EKLNFLTPLKEKLAILDEDGNFFFESRIGALYPYYKEDKNYFYGKIGPKKYKISKDNA
                     SNFPLNFNDENLKNQISEVLNLPYGWGGYNFERDCSLLTRDVFSAFGLYLPRNSAAQK
                     NSFTHFDINTLDNSQKKDFLDRFGKAYLNLLYLPGHIMLYAGKISDKNVAVHNIWGLR
                     KDETQRLLISSSVITSLEIGKDEISKENLLLSRLKEVSFIYLSKEEKEQIANYLEKLK
                     NKTD"
     gene            36483..>37083
                     /locus_tag="R8X70_000334"
     CDS             36483..>37083
                     /locus_tag="R8X70_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEF2928146.1"
                     /translation="MLDKLEKFLVYDNVFLSGGAGVGKSFLTNELIRSYKRQGKVVIA
                     LGSSALSAFNIAGATLHSFFCLGYCQDMDTLSVFDRNQKQREKILKLKENLKKIDLII
                     IDEISMVSADIFEMIGFRLKNSQFDGKILVVGDFFQLPPVIKEKKENLFLNSTYAFSS
                     FFWKELKFKNIKLTQPKRTHNLEFYGNLSLIRQGFLDDKI"
BASE COUNT        13005 a         5365 c         6241 g        12472 t
ORIGIN      
        1 gaatttctaa attttttata tctattgata aaagaatcgt agagaattta ttagaaagaa
       61 ttttggtatt ttatagcaaa aaattcaatt ttactttcaa agaaaagatt tgaatggata
      121 tgcttatcaa taccttgttt ggttaggtat tgatttgttt ttatggattg aaattttttt
      181 gatgcaaaat gagattattt aaggtttgga ttaggcagtg ttgcgttaga acttcccatg
      241 ttgatatttt attgcatagc attaggagcg acattagcat caatttgact taaaagtctt
      301 atagtttctt caaattcaaa gctttcttcg ggattttgtc ctaaaaattt ttgcataaat
      361 tcctttttag ctatagcttc atcaagctcc ttatcactac ccttttgata agcaccgata
      421 cgaagtaata cttcattttc tttcaaaagc gaatttaagc gtttaaattt tctagcccaa
      481 agtttgtgtt caggacttat gatatcgccc attacccttg aggctgaatt ttgtatatta
      541 ataggaggat aaattccaaa atccgtaagc tcacgactta aaacaatatg cccatctaag
      601 atagaacggc tttgatcggc gataggatca ctcatatcat ctccatcaac caaaacggta
      661 aaaaatgctg ttatagttcc tttaccttct tcttttcctg ttctttccat aagttgaggc
      721 aaaagactta aaacgcttgg aggatagcct tttgtagtag ggggttcacc aagagcaagt
      781 cctatctctc tttgcgccat agcaaaacgc gttacactat ccatgataaa aagtacatct
      841 ttaccttgtt ctttaaagta ttcagccacg ctcatagcgc aaaatgctcc atattttcgc
      901 attaaagcac tatcatcact tgttgcaacg ataattaccg tatcatcaag ctttccacct
      961 aaattttttt gtataaattc aggaatttcg cgccctcttt cgcctataag tgcgactact
     1021 ttgataggag cttttgaatt tttaactatc atacccataa gagtagattt tcctacgcca
     1081 cttcctgcaa aaatgcctaa tttttgcccc acgccacaag ttaaaagcgc gtctatggtt
     1141 ttaactccca caggaaaaac ctcttctata agtcctcttt tcatcgcatc aatagatgca
     1201 cgcatgatag gcatatattt agtcgcctct atagcaccct tgccatcttt agggcgcata
     1261 aaaggatcca ccactcttcc taaaagctca tcactaacgc ctatttgcat tcctgcatca
     1321 cttataaaag cgcggtcgcc tattttaaaa ccttctatga aagaaaaagg acttagatag
     1381 ctaaattgct ctttaatttc aacaaccata gctaaggtgt ttaaattttc attttcattt
     1441 gaaacaagtt taatgatgtc acccacaccc gttttaagtc ctcgaatttc tatacttgta
     1501 gcagaaattt tagtgatctc tccaaaaaca gcacttaaat tttctttgcc aagcttagaa
     1561 cgaagttttt ctaaattcat caaaaacgaa cttgcttagg agaattaatg agtgaaaaaa
     1621 attcttcgcg tgttttttca ttttttaaaa aaagtccacg aagagccgaa gtggtagtgg
     1681 tagaatttgc tttttgcacc ccacgcattt caacacacat atgccttgct tctataacca
     1741 caccaacgcc ttttgcgtcg acattttcca ttaaagcttc agcaatttgt tcggtaagtt
     1801 gttcttgaat ttgaagtctt ctcgcatata cctctacaag acgcggaatt ttactaagcc
     1861 ctacaacttt ttgattaggg atataagcca catgcacacg accaaagaaa ggtaaaagat
     1921 ggtgctcgca aagactataa aattctatat cacgcactag aaccatttcg ttatttgagc
     1981 tttcaaataa agcattattt agtatttcct tgacattttt tttatatcca cttgttaaaa
     2041 actcataagc tttaaaaaca cgattaggcg tctttacgag tccttctcta gttggatttt
     2101 cccccataat ttcaagcata gtttttacgc aattttcaaa tttttcttgc aaattattct
     2161 ccgtattttt ttcttggctc attttaacat aaaatgcttt aaaattttat gcaactaata
     2221 aggaaaaatt tgctatgatt aaagcaaatt ttattttata aggaaaaatg ttatggaagt
     2281 aaaagcaaag caattagact ctgttaatgc gactgctagt gtaaaaattc cttcagggat
     2341 gattaaaagc gaagtagaaa atttagctaa aaaagcttct aaaaatgtaa aaatggacgg
     2401 ctttagacca ggaaaagttc ctgttgctgc tgtacttaaa agatatcaaa aagaattgac
     2461 tcaagatgcg gaacaaaatc tttttaaatc tgctgttgat agcgctttaa aagaattaaa
     2521 aaaagaagca aaagaacttg taggtgagcc atattttgaa aaatttgatc gtaaagatgg
     2581 agaaattgtt gctgaattag ctctttcttt taagcctgaa atcaaacttg agggttatga
     2641 aaaactcatc cctgaatatc aaactccaaa agtaagtaaa aaagaaattg atgagaaaaa
     2701 agaagaatta ttaaaacgct ttgctactcc tgaagctatt aaaaccaaaa gagctttaaa
     2761 agaaggtgat tttgcaaaat ttgattttga gggttttgta gatgggaaag cttttgatgg
     2821 aggtaaagct gaaaattatg ttttagaaat aggttctaaa caattcatac caggttttga
     2881 agaaggtatg gtaggaatga aaagcggaga agaaaaagat gtaaaagtaa cttttcctaa
     2941 agaatacggc gcagcacatt tagcaggaaa agatgcggta tttaaagtaa aattgcacga
     3001 aattcaagaa ttaaaattgc ctgagctcga tgaaggaatg ttaaaaaatc ttttacaaaa
     3061 tgaagaaaaa ccaacagttg aacttttgga tgaaaaactt aaagagcaaa tcaaaaacga
     3121 aaaacttttc aagcttgtaa atgatgagct aaaagctaaa tttgctgatg ctttgattga
     3181 aaaatataat tttgatttac ctaaaggcat agtagaacaa gaaactgata tgcagatgcg
     3241 tgcggctttt aatactttta gcgaaaaaga aattgaagaa cttaaagcaa gtaaagaaaa
     3301 atatcaagaa aaacgcgatt ctttcaaaga agaagcacaa aaaagcgtaa aacttacttt
     3361 tatcattgat gagcttgcaa aattgcgtaa gattgaagta aatgatcaag aattgattca
     3421 agcgatttat tttgaagctt atcgttatgg aatgaatcca aaagaacatt tagaaaatta
     3481 taaaaaacaa ggggctttac ctgcagtaaa aatggctttg atcgaagaaa aacttttcag
     3541 cgatattttt atgccaaaaa ccgataaagc aagtaaaaaa gagaaagaag ataaataatg
     3601 tacatacctt atgtaatcga aaaaacaagc cgcggtgaaa gaagttatga tatttattcg
     3661 cgtcttttaa aagatagaat tattatgcta agtggcgaaa ttcatgatga acttgccgct
     3721 tctattgtag cacagcttct ttttttagaa gctgaagatc cacaaaaaga tatatatctt
     3781 tatatcaatt ctccaggtgg tgtgatcaca agcggtttta gtatctatga tactatgaat
     3841 tatatcaagc ctgatgtttg tacgatttgc ataggtcaag ctgcatctat gggtgcattt
     3901 ttattgagtt gtggaacaga aggcaagcgt tttgctttgc ctaattcacg catcatgata
     3961 catcagcctt taggtggtgc aagaggacaa gctacggata tagaaattca agccaaagaa
     4021 attttaagat taaaagctat acttaatgat atcttggcaa aaaatactaa gcaaaaagtc
     4081 gctaaaatag taaaagacac agaaagagat tttttcatgt cagcacaaga agctaaagag
     4141 tatggtttga tcgataaggt tttagaaaaa agttttaaat gagtaaaatc atttaaataa
     4201 aggttgttta tggttagaaa aattatcact tatcctaatt ctagactttt tttaaattct
     4261 gaacctgtaa agcaatttga tcaagaactt cataccctgc ttgatgatat gtatgatact
     4321 atgattgcta gtcaaggagt gggtttggct gctatacaag tagatatccc acttcgtgca
     4381 ttgatcgtaa atattttaga tgaaaatgaa gagcagaaaa aagaagactt actagaaatt
     4441 ataaatccgc aaatcattcc tttaggtgaa gaaaaaatca cctgcactga gggttgttta
     4501 agcgtgcctg acttctttga agaagtggag cgttataatc atatcttgct taaatatcaa
     4561 gatcgctttg gaaattttaa agaattagaa gctcaaggat ttttagctgt ggccatccag
     4621 catgaaaatg atcatcttaa tggtcattta tttatagaaa agatttcttt tttaaaaaga
     4681 caaaaatttg ataaagaatt taaaaagaaa cttaaaaatc aaaaaaaatc taaatgaaaa
     4741 aattaaaatg tgtaagcttt gatgagaatt tagatatcat cgatgtagag tctacattta
     4801 caagaggctt acctaattta agcatagtcg gacttgcaaa tattgcaatt aaagaaagta
     4861 tcgagcgtat caaagccaca cttttaactt gcaatttttc atttcctgct aaaaaaatca
     4921 ccatcaatct tagcccttca ggaattccaa aaaaaggttc tcattttgat ttagttatcg
     4981 ctacgcttat attgttgcaa aatgaagact ttgatgattt ttttgtggta ggcgagcttg
     5041 gtcttgatgg aagtatcaaa agcaccaatg agcttttttc tttactttta tttttatcca
     5101 caaaggtaaa aagtgcaaaa gttgtagtcc caaaaaatat agctctaaaa gcttctatga
     5161 tacccaatct agaaatttat ggacttgagc atttaaatga agtgattgaa ttttttaaag
     5221 aaaaaaacta tgagaaattc aaattcaccc aaagccatcc tttatttgca aatcctttga
     5281 ttatagaaaa tgaaattttt attaaaaatc atcattttga acttgatttt aaagatatca
     5341 aaggacaaga aaaagctaaa agagcttgtt tgatagcagc actaggtatg cacaatatac
     5401 tttttgaagg aagtccagga agtggcaaaa gtatgtgtgc aaaacgcctt gttgaaatca
     5461 tgcctccaca aagtttaaat gaggttttaa tgcaaaatgc ttatatgtct ttaaattcta
     5521 aagattgtga atttacgcaa aaaagagcct taagacaccc tcatcatacc tctacaagag
     5581 ctagtatttt tggtggtgga gcaaaaaatg cgaagatagg tgaaatcgct ctagctaatg
     5641 gtggagtttt attttttgat gaatttcctc attttaacaa acagattatc gaaagtctaa
     5701 gagaacctct agaagatcat aaaattcata tttcaagagt caattcaaaa accacttatg
     5761 aaaccaaatt cagttttgtt gccgctcaaa atccttgtcc ttgtggaaat ttattttcta
     5821 aaaatctgtc ttgcgtttgt agtgaaaatg agattaaaag atataaaaat cacatttcag
     5881 cccctattat ggatagaatt gatctttatg tagctatgga tgagatcagc aaagatgata
     5941 agtcaagtat aaattcaaaa gaaatgagtg aaagaatttt aaaggctttt atctttggca
     6001 aaaaacgcgg ccaaaaagaa tttaatggca aattaaacga tacagaattg caaaaatttt
     6061 gtattttaga aaaagatgcc aaggatactt tggatttagc catttcgcgt tataatcttt
     6121 cacaaagagc tttaaataaa attttaaaag tttcaagatc tattgcagat tttgaagaaa
     6181 aagaacttct tagtaaaaat catattttag aagctttgag ttttaggatg aggagttaaa
     6241 ttggaaaata aaagcatagc tatttttatc gatgcggaaa atatacccgc aaaatacgca
     6301 aaaagtattt ttgatatcgc ttcggattat ggtgaaataa ttatcaagcg tatttatgga
     6361 gattggactc aaaaaaatat tcaagcttgg aaagagcaaa ttgctgagta ttctttaatc
     6421 gctatgcagc agtttaattt cgcagcaaat aaaaattcaa gtgatatgta tttaatcact
     6481 gaaattatga gtatatttta tgagaaagat attgatattt ttgtcattgt ttctagcgat
     6541 agtgactata cctcgctcat tcaaaagcta agagaaaaca aaaagcaagt tataggaatg
     6601 ggtcttgaaa agtctataaa atcttatgta aacgctttta gtgagttttt ttaccttgat
     6661 caagatgaaa acaaaaaaga agatatttta agcaaggatt atttaagagc tttgatcaat
     6721 atcacagaac aactcatcga tgaaaaagga cgcgccgaat acgcgcaaat tcgcaccaat
     6781 atgaaccgca aatattctga ttttaatccg caaaattatg gctttaaaaa ttttcgtgct
     6841 ttaattcaga aatttttacc caaaatgaaa aaatttgaag aagagcgaga aaaaaatatt
     6901 tattttctgg tgaaaaaaga ttatgaaaac tattactgat gatattaaaa ctttagaaca
     6961 aaatgctata aataaaggct tagatgagct tattttaatg gaaaacgcag gattaaattt
     7021 agctaagctt attaaaaaag aagcaaaaaa aattcgcaaa caatacaaga taaagaaagt
     7081 aaaaatactt tttttattgg gcggaggcaa taacgctgct gatggcctag tagctttaag
     7141 aaatttaaag catgcaaaag cttataaact aggctttaaa gaaaatgaaa tttttaaaaa
     7201 acaagagcaa attttaaaaa attttggttt taaatttgca aaaaaagagc ctaaatttaa
     7261 aaaatttcat attgttgttg attgtatctt aggcacagga acaaaccgcg aagtagatga
     7321 aaaaacaaaa gaaattttag aaaaggtaaa tcaaagtaaa gctttaaaaa tagcttgtga
     7381 catacctaca aatttgggtt ttactccttg ttttaaagct gatatcacgc agtgtatggg
     7441 agctttaaaa gaaattttgc ttgaggattt tgctaaagaa tttgtaggca aaatcaaact
     7501 cgcaaaccta ggtatcaatg ctaaaaaatt tagtcttgat tccaaagctt ttttacttga
     7561 agaaaaagat ttaaaaacca tagaaagaaa tacaagctcc aataaaggaa atttcggtca
     7621 tatctatata atagctagtg caagtgcagg aaccctagca ggacttggag ctttaaattt
     7681 tggcagtggg cttgtatcct tagtcgcaaa aaaaagtttt tcacctcttt taatgctaaa
     7741 agaaaagatt gaaaacaatg caagtgccat tgccttaggt atgggacttg aaaatttaga
     7801 tattttaaaa gatgagattt tgcaaaatat tcctttggtt ttggatgcaa attgcttttt
     7861 aagtgaagct gtgctttggt atctaagtag aaaagatgta gtcatcaccc cacatccaaa
     7921 agaatttata agactttata aaatgtgttt tgataaggat ttaagtatag aagatttgca
     7981 aagaaatcgc tttttttatg ctaaaaaatt tgcacaaaat tatgattgtg ttcttgtttt
     8041 aaagggtgca aatcctatca tcatacaaaa agaaaaaatc tttgttgtaa atctgggaaa
     8101 tgaagcttta gcaaaaggcg gaagtggcga tgttttaagc ggtatgatag ctacgctttt
     8161 aggggtaaaa ttcagcgctt tggaagcggc taaaaatgct tgtttagcac acgctcttgt
     8221 ggctaaaaaa tataaattta acaaaaacag ctttgatgca ataaaactta taaaaggatt
     8281 aaaatgcttg taaaattagc ggtacttttt agtggaaatg gaagtaattt acaaaatatc
     8341 ttagaaaaac ttcataaaaa aactataggt aaaaacactt atgaagtcgt gctttgtctt
     8401 tgcaataaaa aagatgctta tgggatacaa agagctaaaa actttgacct tgaaagcgtg
     8461 atcattgaac acaaagatta taaaaacaga gaagaatttg acgaaatttt ggtaaaaaaa
     8521 atcaaagaaa gcggagcaga tcttactatc ttggctggat ttatgcgaat tttaagccct
     8581 gtttttacaa aaaatatcaa agcaattaat cttcatccat ctttactacc cctttttaaa
     8641 ggagctcatg ctatcaaaga aagctatgaa agcgatatga aagtagctgg agtgagtgtg
     8701 cattgggtaa atgaagaatt agatggaggg aaaatcatcg ctcaaaaggc ttttgaaaaa
     8761 caaaatttaa cctttgaaga atttgaagca aaaattcatg gcctagagca tgaaatttta
     8821 cccttaagtg tagtagaaat ttttgaaaat tgtcattaag ttaagatatt ttatcgctaa
     8881 attttagaaa attaaattta cttgagtatt ttatcggtat ttacttttaa aattttttaa
     8941 agcatataaa aaatctctaa tatcgcttac ttgatctgtt acccattcat ctacactcat
     9001 tttttcatca tcttcatcat cttcatatcc ctcctcatct tcatcatatc cataaaagtg
     9061 aggatcatca taaagctcaa tttcccaatc acttaactca cattctacat catcaatgaa
     9121 atttttaaga gttgcacctt caaaatcttt tttatcgtat tctaaaacag tgattagatt
     9181 aggcggtaag gtaactttat attgttcatc aacttttaaa ttaccatttt ccactagatt
     9241 tttatattcg tagcttaaaa cattgcctat aaaagctctt gcttcatgtt ttttaagcaa
     9301 tctatggcac cttttaaata actatcattt ttaagatagt attcaaatac ttgttgcata
     9361 tcttcatcta ataaattttt attttccatt gttgctcctt taattttttt gtaggttttc
     9421 tttttcctta tcctttctta tagcttcatt taataaatca caatattcat tacgatcttc
     9481 ataatcctta taaaagatat taaatttctt ttcaagttga tcggaagtca ttgcacctgc
     9541 agcttttaaa agttttctat ttctagctcc ttcggcttga tctaaaggtg tcgttaaata
     9601 gggaacaaaa ttaacattag ctccaagctc tattagaagt tgcacggttc tgtaattttc
     9661 tgactctttc actgcttcaa ataagggtgt atcctgatat ttatagattg attcaaactc
     9721 atattcttcc atatccacat tagcccctcc tttgatggca agctctagaa atttataatc
     9781 attattacta gcccaaaaat gtataggaga ccagcctgta tcttcgcgat acacttcaaa
     9841 tttagctcca tgatttgcta ggtattggat aatttggggg tttggatttc taacttttag
     9901 gatataccta tagattaaag cttctttgta aatgctagga ttatcttcca tatatcttac
     9961 tacaatatat ttatcattag cttctttgat atatttcata tctgcaaagc gaaaattata
    10021 tttaggatct tttagactta agccatactc atcaaataaa taatctaaaa tagaaaaatc
    10081 attattattt gctccacaag tgcgagctgc tctcataact catagcctta atatcttcta
    10141 atgttttcat tgtttttcct tgtaaaaatt taattatatg ttatatcaaa atatttaata
    10201 tttgctttga agttataaaa ttacacttta aaaaatttca aattttaagg aagcttatgt
    10261 tcgagtggat ttttagtgct gaaatgtgga tcgctctagc gactttgatt ggcttagaga
    10321 ttgttttagg gatagataat atcattttta tcgctatttt ggtaggaaga ctccctaagg
    10381 aaaaaagaca aagagcaaga atttttggtt taagtttggc gatgattacg cgtttgttat
    10441 tgctcctttc tttattttgg attatgaaac ttacaactcc gctttttagc gtattttcac
    10501 aagaaatttc aggaagggat attattttga tcttaggtgg attatttttg atagcaaaat
    10561 ccacactaga aattcatcat gatatcgata atgccggaga aaaaagcgat gaagaggttt
    10621 taaaagaggg agctaaaaga ggatttttta gcatattgat acaaattgct gttttagata
    10681 ttgttttttc actcgactcg gttattactg ctgtaggtat ggttaataat atagaaatta
    10741 tgatgattgc agtggttgta gctgtttttg taatgatgct tgcaagcaaa agtatctcaa
    10801 atttcgttga tgataatcca acgattaaga ttttagctct agcatttttg attttagttg
    10861 gtgtaacttt agttgccgaa ggtttggatt ttcatatttc aaaaacttat gtatattttg
    10921 ctatggcttt ttctttgggt gtagaatcca tcaatatcta tatcaaaaag aagcgcttag
    10981 ctcaagaaaa atcttagaaa atgatgataa aatatacaat gatataaaaa tttaaaaagg
    11041 aaaaaaatgc ctaaagatgc aaatggaaca gaattaaatg ctggagatag cgtaagcgtg
    11101 ataaaagatt taaaagttaa aggtgctagc actactttaa aacgcggaac aacgataaaa
    11161 aatatcaaac ttacttctaa agaaaatgaa attgaagcta aagtagataa atttggcgtt
    11221 attgtactaa agactgaatt tttaaagaaa atttaggaaa gaatttgcgt attttactta
    11281 ttttaagggg gaattactac gcaggacaag aagaatttat caaagaaaat cgcttaaaag
    11341 attacactct tgatctaaat tctttgcgtt tgctttcagg aagtgtaagt aaaatcgtaa
    11401 gtaaatataa aaatttaaat ctaaaaaatg atgaagaatt atataaaatt ttacttcaat
    11461 ttttagaaat gcgtatgcaa aaaggtgaat tttgcatcat taacgcttat aatgaaaccc
    11521 ttaaggttta taaagaacta gctaagcaat atcgctatga tatttatatt atagatttta
    11581 aaagctcttt agaagaatgt cttagaaaaa acgagcaaaa agccaaagag cgtggctata
    11641 tagtctcaca atcactttta aaaaaaaccc atcacctgct tgaaagaatt cctaaaaaat
    11701 atacgatttt aaatcctaat gattggaaaa aatgccttta tcaaatgcct aatcttagta
    11761 agtataggaa aattcaccac ataggcgata ttcaaggctg ctttagcatc ttaaaagaat
    11821 atctacaaga gctcaaagat gatgaatgct atatcttttt aggggattat atcgatagag
    11881 gcatagaaaa tggcaaggtc ttaaaattct tgcttaaaat ttgcgaaaga gagaatgtat
    11941 atttacttga aggaaatcac gaaagacatt tgataaaatg ggccaatgga gaactatcaa
    12001 gctctaaaga atttaacgaa aatacactca aagattttag aaaagaaaaa ctcacgccta
    12061 gggatgctag aaagttttat ccttacttaa aagaatgtct gtactataaa tttcatgaaa
    12121 aacaagtttt ttgctcgcat ggcggggtaa atcttttacc ttctaaggct tatcaaataa
    12181 gctttatgcc aagttatgat tttatttatg gcgtaggaaa ttatgaagag agtcaaaaag
    12241 tagcaagtca gttttgtgaa tttacaaaag acaatgttta tcaaatcttt ggacatagaa
    12301 accgcacaaa attgcctgtg caaatagaaa aaagagtatt tttgtgcgaa ggtaaagtag
    12361 atgatggggg acatttgcgt atagtaactt tagacaaaaa aggttttgag tgtatagaac
    12421 ttaaaaataa agtttataga aagaaataag ccaaaaaggc ttattcttca tctttgttgg
    12481 tttttttaac caccttaaca cgctctatag aattaccatc cattttttta acttcatagt
    12541 aacaaagctc atcttcaatg cgatcgcccg ctacaggcaa gcgtcctaaa aggttaaaca
    12601 cataaccccc tatcgttact tgctctaaat cttcatcgta gcttatcaaa agcatttctt
    12661 caacggtttc tatatcgcaa cgaccttgga attcatagat attttcagca agttttttat
    12721 agctatcttc ttcattttca ctcttaatct caccgataat ttcttccatg atatcttcca
    12781 tggttaaaat tccagctgtt ccaccgtatt catcaatcac aagtgcagtg tgagaacgct
    12841 ctttattcat catcacaaga acttttgaaa tgctaatatt ttcaggaact aaaatcaaag
    12901 gcttaacaaa agtatctaaa ttttcactct tatcactaag ctcattttgc actatatctc
    12961 gtatatgtat catacctaaa atagtatctt tagaaccatc tatatatgga aaacgcgtat
    13021 gcttatgatc gcaaatgatt tgcatatttt cagcataagt tttttgttta tttagacaaa
    13081 tcatatcttt gcgaggtgtc atgatttctt ttgcaacagt atctgaaaaa tcaaccgcat
    13141 tacggataat ttcagtttca aattcatcca aaacaccgcc tttttggctt tcacttgcta
    13201 tgattttaat ctcttcttca ctatgggtta attcgctttc tttggcaggt ttgatgccaa
    13261 aaagcttcaa agtcatggcc gcaagaaaat cgaaaatttt aatacaaggt aagaaaagta
    13321 tccaaaacca atgaagaggc cttgccaccc aaagtacagc tctatctgca atagcaattg
    13381 caatgctttt tggaacaagc tcgcctaaaa ccacatgcaa aagagtgatg atactaaagg
    13441 cgataataaa agctatagta tggataataa ctccattaaa tccaagattt gcaagaggaa
    13501 tttccaacat ttttgctata gcaggctcac ctatccaacc aagggctagc gaacttaaag
    13561 taattcctag ctgacaagca ctaagatagg tatcaagtct tgaagtaact tctagtgctt
    13621 ttttagcacc tacttttttt tccttaacca tttcttcaag ttttgaacga cgcactttaa
    13681 caatactaaa ttcagacaaa acgaaaaagc catttaaaag cactaaagct agtgcaatga
    13741 caaccataag tatagaatat cctgcatcaa aagacgctgt aggtaaagtt tggtttaaat
    13801 ctaaaacctg actggggtcc aataaaaact ccttataaat aaaatattta attatacaca
    13861 attaaaagta aaattttagc ttaaaaatgg tttttaagct aaaattaatt tgcattggag
    13921 tttaatttaa gacatgaaaa tgcttaaaat tctgatcatt ttttgtgcta cattaaccct
    13981 atctattgtc tatgctccac aacctatagc acctttatta tctaattatt ttcatgtaaa
    14041 tttgcaccaa atttcttgga taatcagtgt tacacttatt cccctggctg ttgcgccttt
    14101 ggtttatggt tatttacttg aaattttttc cttaaagaaa attcttgttg tttcattgtt
    14161 tttatgttct atttttggta ttattgggaa cttaaacgat aatttttatt tttttctatt
    14221 tcttagattt ttacaagctc tttgtatacc tgccatactt acagcacttc ttaccttgct
    14281 tagccgctta gaaagcgata atatacaaaa aaatacagcc atttatgtag gtgctacaac
    14341 ttttggtggt tttgttggaa gggtttttgg gagctttttg agtgatctct tttcttggca
    14401 ttttgccttg aattttttta gcattttgat gatggtttgt ggttttttgt ttttattttt
    14461 taaagaacat cctataagct taaacacaca aacttccttg agggattttt taccctttgt
    14521 taaagagctt agatttatgg tgatattatt ttgtgttttt actatctttt tctcttttca
    14581 aagtatagta agttttctac cttttcatct taaagaaagc ataaaagata tcacccaaac
    14641 tcaaattgga cttgtttatt taggattttt aaccggagtg ataagctcac tacttatagg
    14701 taaaaccata gaaattttag gctcaaaaat tcgcacagct atatttgggt ttttggtttt
    14761 tatagcgggt tgtttttgta tgatagtagg gaatttttat tttgcctttt ttgctatgtt
    14821 tgtattttgt agcggaatgt ttataagtca ttgtatattt tcagggattt taaattcgat
    14881 cgcggataaa aagggcttgg ctaatggaat ttatttgaca ttttattata gtgggggtgc
    14941 tttgggttct gtattgccaa gtttttatta tgaaagtttt ggctgggaat ttttatgtat
    15001 cttcacagcc tttttacttt tcatcgcctt aataattttt agcaaattca gatattttta
    15061 taaatgattt ttatttttcg cgtattcgat atttttttca aattctttta aacgcttata
    15121 tatacttcta agttgagtga tggttgtcca attggtgata aaaacgctaa aagaacttct
    15181 tacttgatta aaagcattgt taatctgcat tacaatacca agtcctatag ctcctgcaaa
    15241 aagtcctggg gccatgatta aaaatggaac gataactatc atttgctcaa ataaaatcaa
    15301 ccaaatatta aaatatccat agtgcaaaaa aagtctttta taattgaatt taagtcctgt
    15361 aaaaagctct atcatggttt catttttggc gtattctttg cggttatctt cagcataaac
    15421 aagttctttt ctaaaagctg cttcagcttt ttgattgttg tattcaagtc ctggtagttt
    15481 aatccctaca aaccaagata cgattaatcc ccctaaagaa atcaaaagcg caacataaac
    15541 aagcaagcca tcgatatttt ttaaaaaata aaagctagaa ttctcactta aatttgcaaa
    15601 taaagccttg cttacaacat cgcttaaagt ccataaaatc ggtataaaag ctacaagagt
    15661 cattaaagct cttataaaac taagtcctaa gctttctaca attttagaaa aattataagt
    15721 atcttcttga attctttgcg aacttccttc tatgttatca tccttatttt tccaaaattt
    15781 caaataagaa aaagtcatag cttcacgcca cttaaaggcg taaacactag caaaataaat
    15841 attaatcgtt gcaattaaaa cataaggaat agcaatagct aaaaatacta aaatcaaagc
    15901 ataaaaatca ctcgcagaat agctttcttt ttcaatcata gccctagaat taaaaaaata
    15961 ttccaataaa ctttgataat aataaagtgc gcctttattg ataatattag ctttttggaa
    16021 attttcttgt gctttttgat tggcctcttg gattaaactt gcattgtttt caaatttctc
    16081 ttccgccttt tgcgttgtat tagaatctaa aagctctatt tttggttttt gtaaaacatt
    16141 ataaaaatca ctataccatg aattgattgc aacatttaag cttgtttgca tatataagaa
    16201 aaataaaagc aaaaaaagcc ccaaataagc ccataaagcc cattttttac ttgcaaaaaa
    16261 cgaagaaaac ataccaccgc cttaatctca aaacgaaaat tttaatcaat tttatttaat
    16321 caagagttta ttttttgccc aaatagtctt taatattgta atcaataggc ataacaaaac
    16381 tgattttttc accatctttc aacatttctt taggtggttt tggcaatgga gaagctcttt
    16441 taaataaact taaaacttca tcattaagca ctgcataagg gcaggatttt ttaagctcct
    16501 tacttaggac atttccactt tcatcgatac tcacacgaat tcttacaaca ccttcttgct
    16561 tttgcattat cgcttcttga ggatattttt taaatttagc caaatgagcc ataagcaagg
    16621 cttgatagct tttaatttgt tctttagcat tgccacttac tatagtctgt gttttatctt
    16681 cattactttg tagcggagca ctgagcgatt catttttaaa ttttgaattt tcacttgcat
    16741 tagctatttc tttttgggct tgattttcat cttgtttttc tatctttttt tgagctttta
    16801 atacagcatt tttatcttgg gagttaagac tcattttttc atcttgtttt ttgtttttat
    16861 cttgagaatt gctctttttt tgatcaatcg aaacttcttt taattctcca ataggaagct
    16921 ctgataccat cataatggaa gcaaattcta atccttgttt aaaatcaaca ccacttgatt
    16981 tttcttgagt ataaaaagaa aaaaggaaaa atattaatac taaagcatgt aatatcaaac
    17041 ttaacacaaa cccaaaaatc ataccagatt tcataattaa tccaccttct tacttgaaag
    17101 agctattttt ccatagccat tctcttttaa tttttgcatt acttgcataa tatcttcata
    17161 ctttacactt ttatcgatat gaaaataaat aatttcttct ttattgcctt tggtttttat
    17221 atctaaagca cttgaaagat tttctaggct taatttatca tcattaatag ccaaagtatt
    17281 atcagtattt aaataaagta tgatgggatt tttaagctta tcctctgctt gctgcgaact
    17341 cttgggtaat tctattttga tagaacttgt gataagagga gtaacagcca taaaaacaat
    17401 caataataca agcataatat ctataaaagg agttatattg atctcactta actcctcttc
    17461 tttgtgagcc atttcagttt ttatcattaa aataactcct atgaaaaagt atatagacaa
    17521 aatttgcaag ctcatctaaa tggtgcataa gttttaaatt ttttcttgta agataattat
    17581 aaaaaagcac cgcagggata gcagctatca agccaaaagc tgtagcaaac aaggcttcag
    17641 ctatacccgg tgcaacgact gccaaagaag cattgccaag atttgctata cctataaatg
    17701 cattcataat cccccaaact gttccaaaaa gccctataaa aggtgcgcta gcacctatac
    17761 tcgcaagcaa gctcaagcca tttttgcttg ctgtgatttg ctttgagatg gtattttgca
    17821 aacgcaattc tatacgctct tttatgtgat catttttata ttcacttttt tcaagctcat
    17881 cttgaatttc taaagataaa acacctgcaa aatcctttgt ctgatctaat tcattgagat
    17941 tttttaattc ttttatcttt tgtatggatg agtctaaatt ttttttcata aaataaaatt
    18001 gcataagctt ggaaataaaa actgcccatg ctaaaatgga aaataaaacc aatatataaa
    18061 taacaccttt taccacctca tcagcatttt gataaagact agaaagagaa agctctattt
    18121 taggtgcttt ggtttctatc ttagaagaat caaaagataa atttgtatct gttgcattta
    18181 aatttaacaa taaaaaacaa aataaaaaca ttttttttaa catttgtata ttccttaata
    18241 tttatattca aaacttacta taaaagtacg accgcgagca gagttattat aaatataaat
    18301 aggattaaat aaccctccag cattttgact atcaccagta ttataagtat aaagcgcatc
    18361 catatagttt ttgtcaaata aattttgtat ctctgctttg attgtaaagt ttttcaaaat
    18421 tttataattt gcataaagat caacgatagt tggtattttt ggtaattcat ctgtagtttt
    18481 aagcggagct atagcatcag gattgcttgg atcatcttcc aaactgccta caggagctac
    18541 tctctttgct tttcctgtgt atttggcaag agctcctaga gtcagttttt cttcaaataa
    18601 tcttacaccc atatcaagat tagcataatg ctctggaagt tgggcaaatt ggctttggcc
    18661 tgattgcgct ccacctgttt ctaaagattc tgtatctgaa aatttatgct tggatttttg
    18721 ataagtataa gatagtatag aataaaaaaa tcctgtatca tatttgaatt caagctcaac
    18781 tccgtggaat ttagcttttt catcatcatt taattgcata ataaaaatag cattgtcagc
    18841 tttttgccaa tatcttctat tataaatata attttttacc ttagtatcat aataaagcac
    18901 tttaaaacct aaagtatcat tattgtttaa aatttcatgt gcaaaagaat taaaacctat
    18961 ttgataagta tttgcacttt cagcccttaa aaatgtgttc atattatgct ccaaacctgc
    19021 atcatgggta aaaaaatact cttggacatt tgggattcta tggcttttag aataagaaat
    19081 aaaaggatta aaaagtggat ggatatctgc tgaaagcatt aaagaataat taaaattatt
    19141 gtaatccttt tctaaatttg tcgcattttt tggctgacaa taaggattaa ccatactaca
    19201 aactccctta tatccactta attgtgcatt gatccaattg acattagaat ttagggtgaa
    19261 aattcccttt gtaaaactcg tatccaaata aaaggtttta atatcttgtt ttcctttagg
    19321 ataaaaacta gtcaaaatat aaggcaaaag cactctatct tgtggaaaat cattactata
    19381 atgattattt aaaatattaa ccccataagt aaaatacaaa tttgaatctt gtgaaaattc
    19441 tttattcatg gtattgctaa gatcaaaagt taccgctcga tttttagtct taattccact
    19501 catattgtga taaccccaag tcttgtcttg attatacttt tgctttccgt cattataagc
    19561 aaataaaaat tttaaatcca aaagattaga atcaggattt aaacgatagt caatttgata
    19621 agtatcattt gtaatctttc tacccgcaag attgttatta taagctctat agtttaaaat
    19681 cgcctcactg atatcagatt tgtattctac tttaaagagc tgacttctag gctgattata
    19741 aagattgttt ggatttatag gtgctgctaa attatcatct ggaatgccat catcatcagt
    19801 gtcaaatggg ggtttttgat cgcctatata gcctccacct ccaattttat aattttgaga
    19861 aacattttgc ccactataag caaataaaat gcctaaatta gcattatttt ctaacatagt
    19921 ttttcctgct atagcaccca taaaattagg tcctatagca ttgctaccat aagagtattt
    19981 tcccaaaaaa ccaaaaactc ttccttcttg tactatatca tctacaccta tagttctaaa
    20041 attagccgaa cccattaaag cattaacccc atttgccccg ctaaaagttc cacgattaat
    20101 atctaaggcg actaaaaaat ttttatctat tggagctgta aaacttgaag ttccaatttg
    20161 cccatgaaag ctatcatcac ttgcagaacc aaaaaaagtt tgagttacac catcaatttg
    20221 tgtatttact cttccaagtc ctgtcatacc gcgaatattt actgaaactc ccccttgtgc
    20281 ttgatctact tgagtataag caccaggaac actacgcact atagaatcta tactttgagt
    20341 gtttgaattt aaattatctc ttgtgcttgt tgctccggga gttacaaagg gtttttcatc
    20401 gtttttgatt tttgagcctg aaatttcaag actatcaaat tctaattctt cggaaaaagc
    20461 aaaattagca aaacataaac ccataacaca aaataaactt aattttttca ttattctcct
    20521 ttaataataa ataaaagtat aatcactgtc ttttaaatct ctttctccat agtttaaatt
    20581 caccacgact atttttttat cacttttaaa atcttgtata tgtaaaggaa ttcctatttt
    20641 cttgcttgta tgatagctcc cagctaacaa taaaaccttg tttgtatgat gaaccaatac
    20701 atcagccatt cgcctgtctt taaattgttg aatttctact aatttatcta gtaattcttt
    20761 attttcttga ggatttaatt tatgacttaa ggatataatg tcaaaaattt gtttttttac
    20821 ttcatttgtg gttgaaacat agccctttaa aggctgaact ccattataaa tacttgtaat
    20881 ttctgagcgt gaaagatttg cgcctaatat ttttgctctt gaataaaaaa ctgcattgac
    20941 aaattgatca taatctttcc atttccagcc cttatcccaa tttaacgcat tagtaagttc
    21001 attggtttta atggtttttt tatttttaaa agctttatct aagtgatttt gctctgtgct
    21061 tgctaacatt tctaaagcca catcaaagct tatattttga gaacttaaat ttccttctaa
    21121 ggcattaaaa atcataactt ggcttatctt gtgctttgct tcatcgtgtt tttcgccaag
    21181 cagtatcaca tctgctttta ataattctaa aatcatatct tcaaaagaaa tctttttttg
    21241 agtatgagta tcaagtatat aaaaatcttt gttttcttga agtggaggtg atttttgtaa
    21301 aacagcacaa gcgctcaaca taaagcttat aaatagaatg tttaaaatag tatgtttaaa
    21361 aactcttcgc ttttatcaaa aatttttaag ccctttaaaa ccccctgttt gtagatatta
    21421 tcccacatgt tcagaatacg ccttttggca atttcaaaaa agaaattgta ttcttgcatt
    21481 tttttcaagt ttttttagaa ttttaaaatg caatcctttt tttaaagggg gatttgacta
    21541 tccaaaaatt actaaaaata ttacttcttg taatctatgt tttaagccta tttttttggc
    21601 gcaaaaacag ctttattttt tatatatacc ccaccatcag gataaaagtt tttatcttgt
    21661 taaaattatc tttcaaagga caaataagtg aataattcga ataatatttt tcagcaaaaa
    21721 cgcattcttt tagctgtagt tatttctttt ttattttttg ttgtgtatga ttattttttt
    21781 atacctaagc aacaaataaa attagagcaa aacattacta ctacacaagc tgattctcaa
    21841 aacgcaacca atatcaatgc tccacaacaa aatccacaag cgaatttaaa tgtagctgca
    21901 actagcaata caatacctca agataaaatc attgccgata ttaaaagcga gcattttgaa
    21961 gcgcagattg actctttagg cagaattgta aatttttatc ttcaagataa aaaataccaa
    22021 aatgaaaaag gcgaagctat caatcttata agcaaaggaa atttgcctta tcctttagag
    22081 atgcgtttta gcgatcctgc tatcaatacg caagccttta gcgtgcctta tgctgcggat
    22141 atgagtgaag tttttatcga tgaaaatggc agtaagacac taaaacttac ccaacagctt
    22201 tcagatttaa ttgttgaaaa gaaaatcact ttttattcta agggtaatta cgatattgaa
    22261 gttaaattaa gtaaaaatat aaattatttc ataagtccag gttatcgtcc aagcatagca
    22321 gtagatagct atacagttca tggagctttg gttatggatg atcaagaaac catccatact
    22381 tatgaagatg gcgatatgga caaggatgag aatattaaaa atgcttggat gacttcggct
    22441 tttgatagat attatgctgc cttcttttat aattttgaaa aacctttaaa tgtaactatc
    22501 agtaaagatg ctcaaaataa tcctttggta tttgcgatga gtgataatga atttaaagcc
    22561 ggtggttata tgggccctaa agaacatgtg attttaagat ctatagatcc gcgtcttgaa
    22621 gctgttgtag agtatggttg gtttactttt atagctaagc ctatgtttga atttttaaat
    22681 tttttacata atcatatagg aaattggggt tgggctattg ttataatggt tttaattatt
    22741 cgtataattt tattcccatt aacctataaa tctatgattt ccatgaataa acttaaagac
    22801 ttagcaccta aaatgaaaga attaagagag cgctataaag gcgatcctca aaaaatgaat
    22861 atgcatatga tggagcttta taaaaaacat ggtgcaaatc ctatgagcgg atgtttgcct
    22921 atacttttac aaattcctat tttctttgct atttatcgcg tattactcaa tgctatagag
    22981 ctaaaagctg ccccttgggc gttttggata cacgacttat cagtaatgga tccttatttt
    23041 attttaccta ttttaatggg tgtaacaatg tttatacagc aattaatcac ccctatgacc
    23101 atacaagatc ctatgcaagc aaaaattatg aaattcttgc ctatcatttt tacctttttc
    23161 tttattactt ttccagcggg tcttactctt tattggtttg ttaataatct ttgttctttg
    23221 gtacaacaat gggtaatcaa taaaatgttt gcaaaagaac atcataaaaa acaagcggag
    23281 tgaaaaaatg agaattgaag caaaagatct tcaaagtgca ttaacagaag cttcaaaaag
    23341 ccttgaatgc tcggttatag atttagaata tgaaatcatt cagtattcca aaaatggatt
    23401 tttaggcttt tggcgcaaaa atgctatcat cgaagctaga gctaaaaaac agccttatag
    23461 taaaaaaaat tctagaaaag attttaatgc gtccaaaaat gatgttcata gaaattatga
    23521 aaaaccttac cgcaaattcg atgatagaag taaaatagac aataaaaaag aatttgaagt
    23581 agaggctaga gaagttaaac ctaaagagaa atatgttgtc aaaagcgatg gaatttttga
    23641 tagctttcac aaagaaagcg gaggaactcg caataaggaa gatattttag acgaaattcg
    23701 catacagcta gagaatttat taaaagcaac ttgttttaat atctctttag tggagttaag
    23761 aatgtatgat gaagaaagcg tttttatccg tttagatggt gatgatgcag ccttgctaat
    23821 tggtaaagag gctcatcgtt acaaggctat ttcttatctt ttgcataatt ggatcaacct
    23881 caaatacaat cttttagttc gtcttgaaat tgcacaattt ttagaaaatc aaattcaagg
    23941 aatgcaaatt tatcttcaag gtgtaattga aaaagttaaa atcaatggaa gaggtcagac
    24001 aaaaccttta gacggagttt tgattaaaat tgctttagaa aaattaaggg ctgaatttcc
    24061 aaataaatat gtaggtatca aacaaaacaa cgatcaaaga tatgttgtaa ttaacgattt
    24121 ttttaaaaaa gatgaatgat actatagtag ctattgcaac tgcccatgga gtgagttcta
    24181 tctcgattat aagattaagc ggggaaagag cgcttgaaat tgctttaaaa ttaagcaaaa
    24241 aaaatgaact ttgcccccgc tatgcaactt ttacaaagct ttttaatcaa aaaaatgaat
    24301 tccttgatga agccatagtg atctatttta aagccccttt tagttttaca ggtgaagata
    24361 tagttgaatt tcaagtgcat ggtggtttta gtgtaagtga aattttgctt gaagagttga
    24421 taagcttagg agcaagacta gcagaacctg gagaattcag taaaagagct tgtttaaggg
    24481 gtaaaatgag tcccttaaag gctttaaata tacaggattt aatcttagca aaatctgcaa
    24541 atgcagcaaa gattatcgca agaaatatgc aaggaagctt gggagaactt cttgataaaa
    24601 ttcgcacaga tttggtaaaa actttagctt ttgtggaaac gagtattgat tatgctgatg
    24661 atgatttgcc ttctgattta ctagaacaaa ttagcacaat gtgtgaagaa aattctaaaa
    24721 ttctaaaaga aatttataca ctttcagaaa gtaaaaaagg attgatagag ggttttaaaa
    24781 tcgctattgt gggtaagcct aatgttggaa aatcttctct tttaaatgcc ttgctttctt
    24841 ataaaagagc tattgtttct gatatagctg gaacgactcg tgataccata gaagagagtt
    24901 ttaaactagg tacgcatcta ttgcgtatta ttgatactgc aggaattcga gaaagtaaag
    24961 atgagattga gcaaatcggt atagagctta gtaaaaagag cattgaagat gcagatatta
    25021 tcttagctat ttttgataat tcaagaaaaa aagatgaaga ggatgaaaat atttttaagc
    25081 ttttaagtca aagcgataaa aagatttttt atcttttaaa taaaagtgat ttaaaaactc
    25141 aatttgataa accttgtgat attgatttta tagaacttag tgttcaaaac gatattcaaa
    25201 ttttaaaaga aaagcttgaa aaatatttaa attcgctaga tagtgatgga tttttagtta
    25261 gttctatcgc tcttattaat gcttgtaaaa tttcaagcga agcgatttta agggctaaag
    25321 aattactcag tgaaaattct ttagagttgt ttgcctttga gttaaattta gccattggcg
    25381 aacttgcaaa atttactaaa gatttcgata gaaatgaaat tttagatgaa atgtttggta
    25441 atttttgttt aggaaaatga aaggatacaa atggacaaag aaacaataaa agcacataaa
    25501 atcagcgatg aggaatatga acaaatatta gaaattttag ggcgtgagcc aaatttactt
    25561 gaactaggtg tcatttctgc gatgtggagc gagcattgtt cttataaatc cagtaaaaaa
    25621 tatctcaatg gttttccaac caaagctcct tgggtgattc aagggccagg tgaaaatgca
    25681 ggggttatcg atataggtca aggcatggca gccgttttta aagtagaaag tcacaatcat
    25741 cctagtttta tagagccttt tgcgggtgcg gctacaggag tagggggaat tttgcgtgat
    25801 gttttcacca tgggtgcaag agtggttgca gggctgaatt ctttaaaatt tggcgatatc
    25861 catgatggga aatgtggcaa acatcaaaaa taccttgtta aaggggttgt aagtggaatt
    25921 tctcattatg gaaattgcat gggagtgcca actataggtg gagaatgtgc ttttgatgag
    25981 tgttttaatg gaaatatttt agtcaatgct tttgctttgg gtatttgtaa aagtgaagat
    26041 atcttctatg ctaaggccga aggcatagga aatcctgtga tttatgtagg ctctaaaacg
    26101 ggccgagatg ggttaggtgg agctgtaatg gcaagtgata gcttcaatga agaaagtaaa
    26161 agtttaagac ctactgttca aattggcgat cctttcagtg aaaaactttt aatggaagct
    26221 tgcttggagc tttttaaaac agattatatt gtaggtattc aagatatggg tgcagcagga
    26281 cttacttcaa gctcttttga aatggcagga agaagtggta gcggtatgaa gctttatctt
    26341 gatcaaactc ctatgcgaga aagcggtatg acgccttatg aattaatgct gagtgagtct
    26401 caagaaagaa tgttaatttg tgctaaaaaa ggctatgaag ataaggttat agaaatcttt
    26461 aaaaaatgga atttggatgc tgtggttatg ggtgaagtaa ctgatactgg aaaaatggag
    26521 cttttttggc atgatgagct tgtagggctt atacctattg atcctttgag tgaaaaagcg
    26581 ccgattttgg atcgtcctgt gagtaaacca aagtatttaa atgaaattaa agattataac
    26641 ttcacgctta aaatgtctca acaagagctt tttgaaaaaa tgctaaaaaa tgaaaacatt
    26701 aacaacaaag cctttattta tgatcagttt gattctagtg tgcaaacaaa tactataaaa
    26761 gcagatggag ctttaggtgc gagtgtgata cgcatcaaag aaaatggtgc aagtgtagca
    26821 atggctatag agtgtaattc gcgtttaaat tatgtaaatc ctaaaatagg agcagcttta
    26881 gcagtagctt cagcaggaag aaaagttgct tgcacggggg ctaagccttt ggcaataagt
    26941 gattgtttaa attatggaaa tccgcaaaat cctgaagtga tgtggcaatt tgcacagggt
    27001 tgcgaaggca ttaaagaagc ttgtaaagag ttaaataccc cagtagtaag cggcaatgtt
    27061 tcactttata atgaaactga aggtgttagc atatttccaa gtccaactat agttaatgtg
    27121 ggcgttttag aagatgcaaa taaaacccta aaagcaaatt ttgaaaaaga aaatactatc
    27181 gtttatcttt taggtgaaag ttttggagaa tttgcggctt caatggctat gaaaatacag
    27241 gataaaaagg tagcaggtag tctcaaagag cttgattata aggctgaact tgcactttgg
    27301 aatttgcttt ataaagccaa tcaaaattct ttacttgagt gtgccaatag cgtaggaata
    27361 gggggtattg ctatgacttt agcaaaaatg tttgctattt ctagtatggg tgcaaattta
    27421 aatagtggct ttagtgatga aaaaatgatt tttgatgaaa gtgctagtcg tgctatcgta
    27481 ggccttgata aagaaaatga agaagcattt ttaaaactag cacatgaatt gggtgtaaaa
    27541 gctacaaaac taggttttag cactaaagag caaagtttta aacttgatag tataaattta
    27601 agcaaagacg aacttaataa actttatttt gatagcttta aagagcaaat tcaatgatat
    27661 ttgttttaat tattttaact atcttagtgt tttattggta ttataaaact tggggaaagc
    27721 aagatttttt aaattcagcc acgcgaggag ccaaaggttt tgctaaaggc tttgctcgcg
    27781 gagttatgga agagaggata gatgaattta aaaggcgtat gaattactat gtcatcgcac
    27841 ttttggcaaa gatagcaaaa agtgatggta gggtaagcga aaatgaagca gaaatgatca
    27901 gtcaaatttt agatgcaaac gccaaagacg aaagagaaag ggctttttta aaagcaagct
    27961 ttaatgagca taaagaaaat atccacgatg ctttttatgt ggcaaaggat tttttaaaag
    28021 aagttccttt accgaaaaat gaacgcttta atgtacttcg cgtacttgtg tttatggcct
    28081 tggttgatgc agattttagt gcaaaaaagc gtgaaatttt agaacagatt gcaaaagctt
    28141 ttgatattgc aaaaagtgag cttgataatt ttattgcgag tatttcaaat ttaaaaagta
    28201 ctaaaaaaga actaagcctt gatgaggctt atcgtatttt agagctttca aataatgcgg
    28261 atttaaacgc ggtaaaaaaa caatatagag ctttagctaa aaaatatcac cctgatattt
    28321 taaatgcaaa caatgtcagc gaagaagagc ttaaaaaagg tgtagaaaaa tttcaaaaaa
    28381 tcaacgaagc ttatgaaaaa attaaaaagc atttagaaaa atgattttaa aagaaaaata
    28441 ttttccttta agaatcttat ctaagaacga gtggacttta tctagtataa attaaattta
    28501 taaaaatatt tcaaacgaaa tttaaaaaaa ggagtgaata tgagagcgtt attaagtgtg
    28561 agcgataaag aaggtatagt agaatttgga aaagaacttg aaaatctagg ttttgagcta
    28621 ctttcaacgg gcggtacttt taagctttta aaagaaaatg gagtaaaggt tgtagaagta
    28681 agtgaattta caaaaagtcc tgagcttttt gaagggcgcg taaaaacttt gcatccaaaa
    28741 attcacggcg gaattttaca taaaagaagc gatgaaagtc atatcaagca agcaaaagaa
    28801 aatggaattt taggcattga tttagtttgt gtaaatttat atccttttaa aaaaaccact
    28861 ataatgagcg atgattttga tgaaattatc gaaaatatcg atataggcgg ccctgcgatg
    28921 ataagaagtg cggctaaaaa ttataaagat gtgatggtgc tttgcgatcc gcttgattat
    28981 gaaaagacga ttgaagcttt aaaaaagggt gaaaatgatg agaaatttcg cctaaatttg
    29041 atgataaaag cttatgagca tacggcaaat tatgatgctt atattgcaaa ttatatgaat
    29101 gaaagattta atagggggtt tggagcgagt aaattcatag taggtcaaaa agtttttgat
    29161 acaaaatatg gcgaaaatcc acatcaaaaa ggagctttgt atgaatttga tgcctttttt
    29221 agtaccaatt ttaaggctct aaaaggcgag gcaagtttta acaatcttac tgatattaac
    29281 gcagctttaa atttagcaag tagttttgat aaggctcctg ctattgctat cgtaaaacat
    29341 ggcaatcctt gcggttttgc gataaaagaa aatttagtac aaagctatat acatgcttta
    29401 aaatgcgata gtataagtgc ttatggagga gtggttgctg taaatggaac ccttgatgag
    29461 gctttagcaa ataagatcaa tgaaatttat gtagaagtga ttatcgcagc aaatgtagat
    29521 gaaaaagctt tggctgtatt tgagggtaaa aagcgtatta aaatctttac tcaagaaagt
    29581 ccttatttga ttagaagttt tgatagctat gattttaaac atattgatgg gggctttgta
    29641 tatcaaaata gcgatgaagt gggtgaagac gagcttaaaa atgccaagct tgtaagccaa
    29701 agagaagcaa gtcaagtaga aattcaagat cttgagattg ctatgaaagt tgcaactctt
    29761 acaaaatcaa acaatgttgt ttatgtaaaa aatggcgcta tggtagccat aggaatgggt
    29821 atgacaagta ggattgatgc ggctaaagca gctattgtca aagcacaaga aatgggactt
    29881 gatttgcaag gttgcgtttt agctagtgaa gccttttttc ctttcagaga tagcatagac
    29941 gaagcaagta aagtaggggt taaagccata gtagaaccag gtggaagcat aagagatgat
    30001 gaagtgatac aagcagcaaa tgagtatggt atagcgcttt attttacagg agtgagacat
    30061 tttttacatt aattgagtgt gttaaaataa gatataattt atattattta aataatttta
    30121 aacaaaaata aagtaaaata aaataaattt ttaaagaaag aaaaaaatgt ttagaactat
    30181 aggttttaaa gtttctgcgg cgatttttgt tgttttggtg ttgagtttta ttgctatgca
    30241 attgatttta aatttagact ttaaaaatac cgcagataag atgagtaaat ctaatttaaa
    30301 taccgttagt tcttctgtct ttcaaaccat gagaatggct atgaatttag gtgatcctga
    30361 aaaaattcaa gaagccattg aagatgctaa aacgatagaa ggtattagtg atattaaaat
    30421 ttacccttcg aaagaaacca tagaactttt tgagattaaa aaccctaaaa tttcacaaga
    30481 aaagctcatt atagatcaat ttacacagcc taatttaatt tctttagagc aaaagcttga
    30541 taatattaat cacctaaggc ttattcgtcc tttgatcgca gatgagagtt gtatagcttg
    30601 tcatgccaat gcaaatttgg gtagtgtttt gggtgttatg gatgtatatc attctttaga
    30661 aaacatagaa aaagatattg caaaaacgag tagatcttat atagtgattt ttactatagc
    30721 tttaattttt acgcttgtag tagtactttt tgtgcttaaa atggttgtag gaaatcctat
    30781 tatggaactt ttaagccatg ccaaagaatt agcacaagga agtgggaatt taagagctag
    30841 gataagggtt aaagggcgtg atgaaatcgc taaagcatgc gagtatatta accaatttat
    30901 agagaaaact caaaaaacag taagcagtgc aagtcttaac tccaaaaatg tagaaaaaca
    30961 aagcatactt ttaaattcta atgctataga gcttaatgaa atttcaactt ctagtcatca
    31021 aaagatagat tctagtttta agctaggcgt tgatataggg gcggatttgg atgaaatatc
    31081 taatctttct agcgatgcaa ataaagcaaa tgataaatct tatcagctct tagatcagat
    31141 gatacactca cttcttgaaa ttgataaaaa agtaagtgat ttagtgcaaa atgaaaacaa
    31201 cttggcacta aaaattgaaa atatggtcaa atatgcacaa aatatacaaa aagctacaca
    31261 aatgatgggc gaaatagcag acaaaaccaa tcttttatct ttaaatgcag gtatagaatc
    31321 tgctagagcg ggtagttatg gtaaaggttt ttctgtcatt gctgaagata ttagagcttt
    31381 ggctaataat agtgaggaat ttttacacaa tgtagagctt ataatcaaag aactcctaga
    31441 gagcatacaa gaggttacta aggaacttaa ggaaaattct catagtattt tttcactcaa
    31501 tgaaaatacc catttgcttg caagtaatgc aaacgaagta aaactttgca atcaaaattc
    31561 taaaaatctt gtgacccaat gcactcagag gattaaaatt tcgcaagaaa atattcaaaa
    31621 tttgcttata catatgcgag aaaatgttga agcaagcggt aaaaatgagg aaatctctaa
    31681 aattctactt caagtggcag atgagttaaa aatagtgtgt cataatttag aaagtgaatt
    31741 gagtcaattt caaatttaaa ggaaaaatat gaaaaaaact ttgcaaattg ttttagctgc
    31801 agcttttttt gctggttgtg ctagcacttc tgtaaattca aagtcaactt ctaaaatcag
    31861 caatgaattt atgcaaaatc agctttttga aatagataaa atcgtagtta atggtaaaac
    31921 ctttgatcct aaaaatgctg aagaaaaccc aaatatcagt tttgaaaata ataaatttta
    31981 tggttatgca ggatgtaatc gtttctttgg ttcttatcaa agtaatgaaa atactttaga
    32041 aattcaagga gatcgtgtcg cttcaactca aatgctttgc catcctttgg atgttatgga
    32101 atttgaaaat gcttttcttt caaattttaa aggaagtttt acaatttcaa ataaaaatgg
    32161 caaattaatc cttaacaacg gcgagatgga aatattcttt aaataacatg ccacactcct
    32221 tagttaggag tgtttttctt cgacttgaca aaaaactaaa aaatgataca attataattt
    32281 tattatcaaa aaaggtagtt aaatgataaa atcaattccc gaatggagtg agcaagaata
    32341 tttaatgctt tctttacctc atgaaaagag cgattggaag ccttatttag gagagattat
    32401 acaggcttat aaggattttg ttaaagcagc aagtgaattt caaaaggttt tacttatcgc
    32461 tcctagtaaa agcgactttg ctccatttga aaatatagca aatgtagaat tttttgtatg
    32521 tgatactaat gatacatgga tacgcgattt tggtgctatt gatattttag aagacaatcg
    32581 tttaaaagct cttgatttta cttttaatgc ttggggaaat aaatttcaaa gcgagctaga
    32641 taatgaagta aattctaaac tttttaaaga aaaatttaat gaaaagctta caaaaatcga
    32701 ttttatttta gagggtggaa gtattgattt taatggcgaa ggcgtaatgc ttacaagctc
    32761 caattgtctt ttaaatgaaa acagaaattc tcatttagac aaaagccaaa ttgaagcaaa
    32821 attaaaagaa atttttggct taaaacaaat tatttggcta gaaaatggtt ttataaaagg
    32881 tgatgataca gatcatcata tcgatacttt agcaagattt atcgataaaa atactatagc
    32941 gcattctatt tgcgaagatg aaaaagatga gcattatata cccttgcaaa agatgaaaaa
    33001 agaacttgaa gccacagggt ttaatttagt agagctaccc ttgccaaagc ctttgtatta
    33061 tgaagaaaga agacttggag ccacttatgc aaattttgtt tttgtaaatg atgccttgat
    33121 tatgcctttt tataaggatg aaaatgatga aatcataagg caaagattgg ctaaggcttt
    33181 acctaaacgc aagattatag gcgtagatgc aagagtgttt ttacgccaaa atggctcttt
    33241 acactgctct tgtcaaaacc gcttcaaggg tctaagatga atttacaaaa aaaggcaacg
    33301 cttatagcaa gtttatgcgc tatagtattg gctttgatta aatttgtagt gggtataaca
    33361 agcggttcag tagctgtact ttcaagtgcg attgattctt tgatggactt tgcaatatcg
    33421 gcttttaact ttttagcctt aaaaaaaagt tctcaaaaag caaacgaaaa ttataatttt
    33481 ggtttttcta aaatcgaagc tttaatggga cttttagaag gtgttttcat cgtatcagta
    33541 gggattttta ttttttatga aagtatttta aaaatttatt ataaagaaga aattattaat
    33601 ttaaatgcaa gtatttatgt aatgattttt gctttaatac ttacttttct acttgtactt
    33661 tttttaaatc atgtagttaa aaaaactaaa agcttaatta tagaaagtga tgctttacat
    33721 tataaaacag attgcttgac taatgctttt actttagcag ctttagtttt gatttatttt
    33781 acaaatttgc atattattga tgcgattttt ggcatagtcg tgagtcttta tactgcattt
    33841 tctgctttta aaattattaa aaaagcttta gcttttttaa tggatgaggc tttgcctaag
    33901 gagcaggtta atcaaatttg cgctttaata tctagtaatc ctgaagtgat ttcttatcat
    33961 gagttaaaaa cgcgtaaaac tccaaattgc aattatttaa gcgttcattt ggtgttttgt
    34021 cctataattt cgcttttaag cgcacataaa gtttcagatg agatagaaaa tggtgtgcgt
    34081 gaaatgttta atggggaaaa atgggatata caaattcacc tagatcctta tgatgatgaa
    34141 gaacaagaaa ggcaaagaca atgaaaattg cactaattca acaaaaattt cattttacta
    34201 aagaaaaaac catagaaaaa acttgcgaat ttatcgaaca agccgccaag caaggagccg
    34261 agcttgtttg cttaggagag cttcatcaaa gcgagtattt ttgccaaagt gaaaatgtag
    34321 atttttttga tttggcaaat gattatgaaa aagatgtgca gttttggtcg agtatagcaa
    34381 agaagcacgg tgtagtttta cttacttcac tttttgaaaa aagaagcgcg gggctttatc
    34441 ataatactgc tgtagttttt gaaaaagacg gaagtatagc aggaaaatat cgcaagatgc
    34501 atatacctga tgatccttgt ttttatgaaa aattctattt taccccaggt gatttgggtt
    34561 ttgagcctat aaatacaagt ttaggaaagc ttggagtgct tgtttgttgg gatcagtggt
    34621 atcctgaagc agctagactt atggctttaa aaggagctca aattctgatt tatcctactg
    34681 ctattggttg gtttgacaag gatgaaaaag aagaaaaaca aaggcaactt ggcgcttggc
    34741 taggggttca aaaaggacat gctattgcta atggtttata tactatagca gtcaatagag
    34801 tgggttttga agaggataaa agtggtgtag aagaggggat aagattttgg ggaaattctt
    34861 ttgtttttgg accacaaggt gaagaaattt gtattttaga tagtgaaaat gaatgcataa
    34921 agcttgtcga tattgactta caaagaagtg aaaatgtgcg tcgttggtgg ccttttttac
    34981 gcgatagacg catagagtat tttggtgatt tatcgaaaag atttattgat taaaaattta
    35041 aaaagctctt taataagggc tttttaaaat tagtccgttt tgttttttag cttttctaaa
    35101 taatttgcaa tttgttcttt ttcttcttta ctcaaataaa taaaacttac ctctttaagt
    35161 cttgaaagca ataaattttc ttttgaaatt tcatcttttc caatttctaa gctagtaata
    35221 acgctcgagc ttataagcag tctttgggtt tcgtcttttc ttaatcccca tatattgtgc
    35281 acagcgacat ttttatctga aatttttcct gcataaagca ttatgtgacc aggtaaatag
    35341 agtaaattta aataagcttt tccaaaacga tctaagaaat cttttttttg agaattatca
    35401 agagtgttta tatcaaaatg cgtaaaagaa tttttttgcg cagctgaatt tcttggcaaa
    35461 taaagcccaa aagctgaaaa gacatcacga gtaagtaaag agcaatctct ttcaaaatta
    35521 taaccgcccc agccataagg caaatttaaa acttcagaaa tttgattttt taaattttca
    35581 tcattgaagt ttagaggaaa attacttgca ttatctttag atatcttgta ttttttaggg
    35641 cctatttttc cgtaaaaata attcttatct tccttataat aaggataaag cgctccaatt
    35701 ctgctttcaa agaaaaaatt tccatcctca tctaaaatag ctagtttttc ttttaggggt
    35761 gtaagaaagt taagcttttc ataaatttgc gctctattgt tagagaaaaa ttccaaatct
    35821 ttgctttcta taaaacccac ccctgcttcg cttaatacaa aagcataacg cttatccttg
    35881 ctaaaatgcg aaactaaaat aggagtaccc gcatttaaaa tactatcgct tgcataatca
    35941 aaaggaattc cttcattttc aagaaaagga ttttttaaaa tcgctctttg cgtagggata
    36001 tttttaataa gggtgttttg tattactaaa gcttttttat caaacttgcc tagctcttta
    36061 gtgtttgcat tatctatagt tttttcaaac catgataaag gaattacttg cttgttaaag
    36121 aaataataag tatttttagg atttgtatat aaagaaaatg accaaaaaag attttgattt
    36181 tttaaagttt taaaagagct gtgccatggg ctaaaaaaaa gttgtttgta tttttgagaa
    36241 tcaaaattta tattttgatt cattttggat aaaatgctga tattttgatc aaattcgagt
    36301 tttgcatagt gtgagtcttg ctgatcttta aaatttaaaa tagtttgaga tggggctgga
    36361 cttaattttg tttcttttat agaacaagcg gtaaaaaata gtgctgtaag acaaggatat
    36421 agccaaattt tcataatcaa ccttttacaa aaagtagtta taattaaagc caaggaaata
    36481 taatgcttga taaactagag aaatttttag tctatgataa tgttttttta agtggtggcg
    36541 caggcgttgg gaaaagtttt ttaaccaatg aactcatacg ctcttacaaa agacaaggca
    36601 aggtcgttat agctcttggt tctagcgcac tttcagcatt taatatagca ggggcaacct
    36661 tgcatagttt tttttgtttg ggttattgtc aagatatgga tacgcttagc gtttttgatc
    36721 gcaatcaaaa acaaagagag aagattttaa agttaaaaga aaatcttaaa aaaattgatt
    36781 taatcatcat cgatgaaatt tctatggtaa gtgctgatat ttttgagatg ataggtttta
    36841 gattgaaaaa ttcgcaattt gatggtaaaa ttttagttgt gggtgatttt tttcaattac
    36901 cgcccgtgat taaagagaaa aaagaaaatc tttttttaaa ttctacctat gctttttctt
    36961 cctttttttg gaaagaatta aaatttaaaa atatcaaatt aactcaacca aaaagaacgc
    37021 ataatttaga attttatgga aatttatcct tgattaggca aggattttta gatgataaaa
    37081 ttt
//
LOCUS       DAQUWA010000008        35554 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.008, whole genome shotgun sequence.
ACCESSION   DAQUWA010000008 DAQUWA010000000
VERSION     DAQUWA010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 35554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35554
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.008"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(110..682)
                     /locus_tag="R8X70_000335"
     CDS             complement(110..682)
                     /locus_tag="R8X70_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEF2928147.1"
                     /translation="MKKILLSSLVAASLLSAGLFAKEYTLDKTHTDVGFKIKHLQISN
                     VKGNFQDYDAVIDFDPASFEFKKLEATIKVASVNTDNQTRDNHLQQNDFFKAKQFPNM
                     TFVMKKYEKIDNEKGKMTGTLTITGVSKDVVLDTEIGGTAKGKDGKEKVGFSLNGKIK
                     RSDFNFAPGTSTITLSDDINLNIEVEANEK"
     gene            complement(757..1119)
                     /locus_tag="R8X70_000336"
     CDS             complement(757..1119)
                     /locus_tag="R8X70_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEF2928148.1"
                     /translation="MIYENDLIYIEKEEAQVPWIKIFTKQVYKEFSDCPYELQKEIFD
                     KILRCEKAMIEFYKPEKINIASFANYVPRVHFHIMARFKEDAFFPECMWGKQQRELKD
                     LNLPSFDEFVIFLKNKMD"
     gene            1229..1909
                     /locus_tag="R8X70_000337"
     CDS             1229..1909
                     /locus_tag="R8X70_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928149.1"
                     /translation="MQIGLNYNYASNSSYYDKTQKNNAEQENTENTNSQNKDSKQNNE
                     QTQMINGVELTIQQVQQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFSYTRGPDNQM
                     YATAGEVPIRMQKGRTPEETIANARQVVAAAMAPADPSPQDYKVAANALKMEFEARAE
                     ATKLKAQEAQEKKEENEEKQENLDINNQDSKDNFEETQANKDFKNFIGKIYQQNSQNN
                     PINFSLVS"
     gene            complement(1928..2632)
                     /locus_tag="R8X70_000338"
     CDS             complement(1928..2632)
                     /locus_tag="R8X70_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEF2928150.1"
                     /translation="MRIFFILSLFFHTLFAVDDLDNALRLYEGNKFVKAYEIFERLCE
                     EDNARACFSLAYMNENAQGVARDFDKAYKFYDKSCKLGLAKACSNMALTLQDLGYVNE
                     SLLAFNKACNLGESSSCNHMGLVYEDEKDGQMATHFYKRSCDLKDARACYKLGFLYER
                     GELVRQNLKSALAFYSKSCTLGFAEACYLIGRYYELEKKDLKKAKRYLGMACDKKHQE
                     ACAAYRKLNSQDIEIY"
     gene            complement(2629..4461)
                     /locus_tag="R8X70_000339"
     CDS             complement(2629..4461)
                     /locus_tag="R8X70_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HEF2928151.1"
                     /translation="MQINILNHFIKAYEDAYNIDFDKSFEGQIKMLCKKLNEPFMHPS
                     YNLIQELEELSFSLDKNINIAIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLR
                     YADEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTP
                     GLNANEDDTLTTLKELQNIHAAIWLSLIDNAGKKSEEDVIKANLELLGENSICVLNQK
                     DKLSAQELENVLNYAKTVFSKYFKELIAISCKEAKDETKYEESNFNLLLDFLDNLDEK
                     ALKQKFTKRKMLHLCQVLEDENRLFVDIFDKLANQFQIYQEKLNSSFDDFIKEVQILN
                     HQILNKLKSIGERIASEIFNCIKEKEAHFYKEAKGFLKKDLYVKYDYKAPFISSDDAF
                     LAMFYNSDIMNKEFKKIKNEIYESFEKIKQKLKDFIDNLEKDILLFKAEFSNIQKDNI
                     LQSDKNFSELRAFCNASDEYFLKDFKELLFKSLLELDLFFEKLNLKAFANYANATKLS
                     LAFFSRKINESRVLYELDSSEFTLFYPKKSEIYERVLTELNAYEFEALLINKPILVKI
                     SNHFLEQNTNIIQEKNKILDLKKVELQKRKEQILEVRSVLKENL"
     gene            complement(4451..6637)
                     /locus_tag="R8X70_000340"
     CDS             complement(4451..6637)
                     /locus_tag="R8X70_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002797317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HEF2928152.1"
                     /translation="MKELLQKLWQNELQLLDFNASFKDKNILDVSELAIILSVNKDNY
                     ERYFLLKEFSNICKKIDLRVDIFSVQKAQICVLNMFREGFIPKQDLLKALRILQKISN
                     NAEILEYIQNIQVQSIDKKALFQSGFNELNHINMELSQLSFDENSKIRLQKTLEKFQK
                     LEFNIAITGVMNSGKSSLLNALLKEDFLGVSNIPETANLTLLSYGNTQEAVIYFWDTQ
                     EWDNILKSSKFSKELKEFIDELALKIDIKEYVQDKALTQKINLKELKEFSSAKNQISA
                     LIKKIEIKSNLEFLKNNISIVDTPGLDDIVVQREILTNEYLKESDFLIHLMNASQALT
                     QKDAEFLIHCLLNSRLSKFLIVLTKADLLSQKDLDEVINYTKESLKARLENFDTHLIE
                     KIDFLCVSAKMASDFYKGLSSEESFKKSGMKEFEEYLFNELYSGEKSKIILQAYKKEL
                     LLELRNILNEYEMQNKLIKEDGQGLSEENDKLLLEFKAKEEALKEAKEEISNSILNLE
                     NFENGVDNLVLLLAKKLKERLIDEIKYLKDKAQKININRILNMIDITVKDGINDILRE
                     VKFENIKKIEELKTSLALKYDFLKDDFDNGFEGFKDEISKKIENIFSDEKFALLRLQI
                     EQIISTKVDLFELETKLTEVIFSTFESFNIGAILKDLDINGAFFAFLNERMKNYEVLQ
                     KEKLASIEHLINNLKNQNADILFSYEGNLEKIAKLQQLEVELMNAN"
     gene            complement(6665..7390)
                     /locus_tag="R8X70_000341"
     CDS             complement(6665..7390)
                     /locus_tag="R8X70_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HEF2928153.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYSDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKIEERIEPEVAEETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRTVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKNLPLQSKIAYMRRQLVAQRNK"
     gene            complement(7383..9374)
                     /locus_tag="R8X70_000342"
     CDS             complement(7383..9374)
                     /locus_tag="R8X70_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HEF2928154.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLGNGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAS
                     WGVPWTRVTKGPRTVVINAQKTVIEEREEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRVIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLDG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIIGDYFADYCKNNGEVIDTNIVKDFLT
                     KEYQYLKSLVDKEGKYSVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKESQN
                     VKVHCKELDCANPELEEAYRVPRMLKVALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTLTYWVEGESLPRVEYDELDIMKMEMPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGKNRHEIQHALMPYELQPKYKALNQRIGVDYE"
     gene            complement(9358..10143)
                     /locus_tag="R8X70_000343"
     CDS             complement(9358..10143)
                     /locus_tag="R8X70_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HEF2928155.1"
                     /translation="MSELIEGYLGKSIDGKKSKMPAKLDFIQSASGLFLGLFMWVHMV
                     FVSTILVSKDFFNSVVHFLELKFIYNDPMMSYITSFLAACVLVVFFVHALLAMRKFPI
                     NFRQYQILRTHAKKMNHGDTSLWLVQAFTGFVMFFLGSAHLIFVITNGDKISADMSGD
                     RVINHFMWLFYIALLICVELHGSIGLYRLCVKWGWFEAKDVKDIRKSRKKLKMAKWII
                     SIFFLVLGVLSLAAFAKIGFENYQSQTTAMVKTYNGANYEYSI"
     gene            complement(10211..11026)
                     /locus_tag="R8X70_000344"
     CDS             complement(10211..11026)
                     /locus_tag="R8X70_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEF2928156.1"
                     /translation="MEFWQNIYSNFDVVAFSVLGFKVHWYGIMYVLALLLALLLAKFF
                     VRKFKLDIDEKRLDSYFIWVEIGVILGARLGYILIYDAHTMYYITHPWQIFNPYANGE
                     FVGIRGMSYHGAIIGFLIATFLFCKKYKENPWKFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITDVSWGIYVEGVLRHPSQLYEAFLEGVVVFIVIYLVKMKQKFQGELILVYACV
                     YSLARFVCEFYREPDFGLGFIFWGMSMGQILSLLMFVAALLFYICIKFKKVNI"
     gene            11117..12022
                     /locus_tag="R8X70_000345"
     CDS             11117..12022
                     /locus_tag="R8X70_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928157.1"
                     /translation="MKKYFLFIIALFLAACSGASNNFVHVSMPNFKPQTPTKVEPIDS
                     GVSIMLEPINIEQNNNYSDYFENSVLKIRIDKEVALLKENLEEQFKTIAQLKGYKIVT
                     SNPDYTLKSLINVLIEEKNIQKSNNFMSGESVKSNLGIKFQGKIDFIDQHNPQNSTNL
                     TSHTKLDSLVDLNYPIKTKDGINMFKTTISTVPTQLNKGLEKPAFEIDKSFLHFYKNT
                     LNTLYNNLPKATDIGKTVPNSNTDSSGFNHFDTNTIFEENLPQEQNLDNSSQDISFQE
                     QTSSNSNIQYENNTNKNQDGVIIFE"
     gene            complement(12095..12886)
                     /locus_tag="R8X70_000346"
     CDS             complement(12095..12886)
                     /locus_tag="R8X70_000346"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEF2928158.1"
                     /translation="MKFLAVIGDPISHSKSPRIHNNAIQVLKLDGIYTRYHLQDYHQL
                     RQDFFKLKLQGANITLPFKEAALEMADVKDELASNIGSANTLCLKDGKIYAYNTDALG
                     FLEAIKEFESINKALILGAGGTALALAFALKQKGVEVCVANRSEKRFKDFTLYKTSLY
                     NALDDFDFDLVVNSTSAGLKDDDLPCDKILLDKILSRAKFAFDVIYGKETSFLKLCKE
                     HNLKVKDGFDMLLWQAVFAFELFFDVKDKREKIKNAMQEALKLEF"
     gene            complement(12883..13710)
                     /locus_tag="R8X70_000347"
     CDS             complement(12883..13710)
                     /locus_tag="R8X70_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEF2928159.1"
                     /translation="MENNKNEFDDIILEKSNKSEKMKKILLRVIALIILFLVIMIVMK
                     LINSGEENTENQSILPSESLNITQDNNTDSFESMPITENTSAEDQFEALRRQIQGEQN
                     DNSLAPAPNANDNINLTMPDQEVPAEPNTTNSEKVAPLNTTPPKQEVKQESKPKEEAK
                     QTVVKKEPAKQTPKQESKANANDLFKNVDAKPVHPNGLASGIYVQIFSVSNLDQKSRE
                     LAAVKQKGYEYKLYKTTVGGKEITKVLIGPFEKANVAAELAKIRKEVAKDAFSFTLK"
     gene            complement(13723..14268)
                     /locus_tag="R8X70_000348"
     CDS             complement(13723..14268)
                     /locus_tag="R8X70_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HEF2928160.1"
                     /translation="MISPMDLSLIKIISDHYYIRRDKIMKKITHRGRLFFDKFERIDA
                     PLNLNIMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDIPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            complement(14265..15509)
                     /locus_tag="R8X70_000349"
     CDS             complement(14265..15509)
                     /locus_tag="R8X70_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEF2928161.1"
                     /translation="MSLEQFDKEIFDLTNQELVRQCEGLEMIASENFTLPEVMEVMGS
                     VLTNKYAEGYPGKRYYGGCEFVDEIENLAIERCKKLFNCSFANVQPNSGSQANQGVYA
                     ALLNPGDKILGMDLSHGGHLTHGAKVSSSGKMYESFFYGVELDGRINYEKVREIAHIV
                     KPKLIVCGASAYARIIDFSKFREIADEVGAYLFADIAHIAGLVVAGEHPSPFPHAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSEE
                     WKIYAKQVRSNAQALAKVLMDRKYKLVSDGTDNHLVLMSFLEREFSGKDADLALGNAG
                     ITANKNTVPGETRSPFVTSGLRLGTPALTARGFKENEIQIVANYIADILDDIQNTHLQ
                     KEIKEKLKTLASNFIIYEKAMF"
     gene            complement(15506..17014)
                     /gene="lysS"
                     /locus_tag="R8X70_000350"
     CDS             complement(15506..17014)
                     /gene="lysS"
                     /locus_tag="R8X70_000350"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEF2928162.1"
                     /translation="MFDNILEQQRIQKANELKNAGVNPYPHFLVKELSLADFKKKFSY
                     IFDTENKRDESISSVISGRLKLLRIAGKSIFANIEDENENLQIYFSKDSLGEEKFNLF
                     KKNLEVGDIILAKGFPFVTKTGEFSLHASEITLATKSIVPLPEKYHGLTDIEQRYRKR
                     YVDMIMNAEVRKDFLTRSKVVSLIRHFFEEKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKDLMDLTEELFALLLEKLQLGKIIEFDGQKIDFSKPFERITYKDALKKYGALSDEII
                     ENKDKILEKLKKDGFEANDKLDLGHLQAELFDNYVESKLIDPTFITDFPISISPLSRR
                     SDKNSEIAERFELFVCGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     VNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEDKE"
     gene            complement(17014..17484)
                     /locus_tag="R8X70_000351"
     CDS             complement(17014..17484)
                     /locus_tag="R8X70_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEF2928163.1"
                     /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREILLKTLYHSDTHY
                     TPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCNNCNQKAKVKI"
     gene            complement(17488..18048)
                     /locus_tag="R8X70_000352"
     CDS             complement(17488..18048)
                     /locus_tag="R8X70_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEF2928164.1"
                     /translation="MEFYWFDAFILGFTLLLGLKGIVSGLIKEVFGLLGIIGGVFIAS
                     KYASQAAEFIQNTFYKIENQSLANFAGFLAILIIFWIICLVLGNFISKLVKLSGLGFL
                     DRLGGFIFGGAKVFLIFAILVFCVARIDFLNDKLNQFAQNSFTLTPLKNIGSFIMNQS
                     LTTSSLGQIDQNLQDIRDDLSTTQGE"
     gene            complement(18129..18416)
                     /gene="gatC"
                     /locus_tag="R8X70_000353"
     CDS             complement(18129..18416)
                     /gene="gatC"
                     /locus_tag="R8X70_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEF2928165.1"
                     /translation="MQIDEKLLSKLEKLSALQIEEEKRSEVICELSEIVNFVEKLNEL
                     DLSSSEVTISTIKGGAPFRSDSVNSSNVVETVLNHAPKSNDHFFIVPKIIE"
     gene            18548..19126
                     /locus_tag="R8X70_000354"
     CDS             18548..19126
                     /locus_tag="R8X70_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928166.1"
                     /translation="MGLKDNLKAVKAEINTEEQFIENFIKGERFIKKYKLYIFALIAI
                     LIIWLTISFISGKIEQYNIEESNKIYTSLLNNPNDQALLEQLKNKNANLYAIFLMKEL
                     AKDINNTEIKSQLQSLSSNSDANHLLKNIISLPLGEKSIFLKNYDKILQAYRLLGEGK
                     IEQANILLSQIKDDSALSQIAKNLKHYQGISR"
     gene            19123..20121
                     /locus_tag="R8X70_000355"
     CDS             19123..20121
                     /locus_tag="R8X70_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928167.1"
                     /translation="MRQFFLISFCLIFLCACGTKRQYFEPSQTDGKLSSNDSLKSSIV
                     DWNTISAKLKNNQVILKNDAIIEDFKLDKGYILLAYQEGEFIEADDNGNLKIYNSSHD
                     EVYSYKFDAAVLGVALHGDDLALVLANNSIVLANRSLGIKFSQNLTPAPAQDSRVANP
                     IFLDNIIIYPTLDGKITIVSKNTFEVVKDVVISAESFFNNVIHLDINDDKMIAATAKK
                     VIVVSPARTLYLDADIKDIALDSNALFILEKNGNIIKTDYNLRKITEKKFDFAIFTKV
                     SIHNDHLYAFEKTGYLIKCDLNLENIQIFELPNAVEKISFMGNGKFYYGDKILDLL"
     gene            20118..20405
                     /locus_tag="R8X70_000356"
     CDS             20118..20405
                     /locus_tag="R8X70_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
                     /protein_id="HEF2928168.1"
                     /translation="MNILNEAMKVLKLNLKPFDLTNLTKKKTYLCALNDENLLLIYTG
                     KARFINKDAIFINNLANDFDLKYKYFFTKSPLCSKAKHYLEEKGFHIHAIL"
     gene            20392..21021
                     /locus_tag="R8X70_000357"
     CDS             20392..21021
                     /locus_tag="R8X70_000357"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEF2928169.1"
                     /translation="MLFCDIGNSNASFLDDNKFFTLNIEQFLEFKSEQKIFYINVNEH
                     IKEHLKARKNFINLEPYFVFDTIYQGLGVDRIAACYTIEDGVVVDAGSAITVDIVSNS
                     IHLGGFILPGIANYRKIYAHISPRLKHEFNTQISLDAFPQKTSDALSYGVFKSIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDYAIYDKLLIFRGMKKIIQENPNLLF"
     gene            21148..22494
                     /locus_tag="R8X70_000358"
     CDS             21148..22494
                     /locus_tag="R8X70_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEF2928170.1"
                     /translation="MTQQEFDVIVIGAGISGAALFYELARYTDIKNIALIEKYHAPAT
                     LNSKGTSNSQTIHCGDIETNYTLEKAKKVKRTADMIVKYGLLQNAQNQFMFSHQKMAL
                     AVGDSECEYMKKRHEEFGELYHYMKFFNKDKIKQIEPKVALGENGRDDRPENICAMGV
                     EAGEVFTTVDFGKMSASLVEQGQKQGKNTFVAFNQEIVHIEKKDDIFILKTNTYQEYR
                     SKAVVVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFSMFKDP
                     TIRNYILYNYLFELPFIDKGLFVKDAKKIVPSLKTSDIYYAKGFGGVRPQVIDKTRGE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLMCEYLGAKFDEDKFASELL"
     gene            22546..23988
                     /gene="pyk"
                     /locus_tag="R8X70_000359"
     CDS             22546..23988
                     /gene="pyk"
                     /locus_tag="R8X70_000359"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEF2928171.1"
                     /translation="MLKKTKIVATVGPASEKEDVLRQMIINGVNVFRLNFSHGTHEYH
                     KNNLETIRKVSRELNTRVGILQDISGPKIRTGELKTPFELKKGDRLDFYYEKIIGEQI
                     APNHYKLSINQSEILNMLKLDEYVYLYDGSIRAKVTAKDSEKIETLIENDGFLNSNKG
                     INFPNTKINIDVITQKDKKDLLWGIENEVDFLAISFVQNAHDIDEVREILAQNNAKIS
                     IFAKIEKFDAVENIDEIIASSDGIMVARGDLGIEVPYYKVPNIQKAIIHKANNASKPV
                     ITATQMLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDVMCQTI
                     IETEKRYPYNKFNEFENLDNTDKIMRSSAHLATDLNADAIFSLTSSGKSAIKISRYRP
                     DMEIIAVAHSEKTLNSLSIVWGVNPAILVNKSEDLTDLLRDSVKSSVEKGFMNKEKCY
                     LLTAGFPTGVEGTSNLIRILAKEQIAYYLK"
     gene            24080..24706
                     /locus_tag="R8X70_000360"
     CDS             24080..24706
                     /locus_tag="R8X70_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928172.1"
                     /translation="MQINTFSNVASMAQAQVSNKKADGNATENTKDTNVQSANSNQDI
                     LDKLNALGGKGISQIYLVQFQQQTMSTVLNTSNAQAGINDLLGGNDLNSVKSMLSDID
                     FASLGYNGKNPLTMNTDELNQLISEEGFFGIDNTANRIADFVIKGAGNDVEKLKKGLE
                     GIKQGFEQAEKIWGGELPQISQDTIEATIKKVSDRIDELGGKTLDLKA"
     gene            complement(24735..27197)
                     /locus_tag="R8X70_000361"
     CDS             complement(24735..27197)
                     /locus_tag="R8X70_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEF2928173.1"
                     /translation="MADKEDIVLEKPEDTLNEPRLDESLGEFKGQEGQAPEDEEFASL
                     PEELPRENSDGGFKFTRESAPEESSTFEEVKEDEPTPWYKDRKFMSLVGLSLGIICIL
                     VFTLFYLTFNEGKVKPDIIASKPIEQPVVMPDESYNYNDMTRVDGMIQKANALYLKGE
                     VEQALKVYEQIAVYNESLSNYNLGVSQMNEGKFDEAFDSFKKAIANGENQSVAAINAA
                     VCALKLNDKEKFKYYIDLAQVYLPKEGKSKLYDYYLALINYYKGYYPEALQMLQRVNS
                     EPYTDVAKYLSAKIYAKMDFDAKSVQQLNTQGSFEPSLSLGLLYARMGEYDKAKIALN
                     TAMKIERDFNQSLSALTLIDIKTGDFQDMLLRLQDTYRNDEDKYKILDRYKIKVRLNK
                     ELFNIAIAQRNFSNDILKKQKDQFDLLFYFAPYQVFDSKQASLYIKKANITNFVDDSS
                     DGQSYLARSQALSSTNVKISNIINDALNQKLRLANKEFQALLEDYPEHSILQYNLALT
                     YAQMQNYELAYKHFSSSYHLNPKNYLAGAFAMFCGKLSNNDTTKLYHEILDNIAADSN
                     FKANMQKNMLFLANGDYISMLPYLDENGQKTPLNLIFETIIAKNNNLNNQVDVRIAKL
                     RSELPQDIVANILYFNSLNSNLNIKEYAQNAQIHFKNLQVDYRSVFGGSNIARELYVN
                     LMHIAGLLNLERQKFKTLINTSKVKDEGMIQTLAYLDIFAQQYEESYALYNTLIDEYG
                     AKDSRTLFLASVAAVGANNPNSAIALLQLSKLTDKNNKESKVALGLLYQEVGNYEAAM
                     TQYRTLPNDFKSEFFTFDIKNQ"
     gene            complement(27207..28442)
                     /gene="serS"
                     /locus_tag="R8X70_000362"
     CDS             complement(27207..28442)
                     /gene="serS"
                     /locus_tag="R8X70_000362"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEF2928174.1"
                     /translation="MLDLKNLQNNFDEVAKKLQNKKVDENILKNLAELFTNLKKEKAS
                     LEEFQAFQNKFSKELATAEDKESLKAKLSENKIKINEQNAKVNALENELETIAHAIPN
                     IPDECVPVGEDEEENVEIKKVLTPPQFDFTPKEHHDLGESLNWLDFVRGVKISQSRFC
                     VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNSPTMFGTGQLPKFKDDMYKIED
                     EDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQF
                     EKVELVSITKPEQSDSIFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDLEV
                     WIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME
                     NYQDKEGRIQIPDVLKKYF"
     gene            complement(28452..29411)
                     /gene="trpS"
                     /locus_tag="R8X70_000363"
     CDS             complement(28452..29411)
                     /gene="trpS"
                     /locus_tag="R8X70_000363"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEF2928175.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIRQMVEAQEKSEMFMFIANYHAM
                     TSSQDGKKLEQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTQLVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPEAKINEEVAVVVGTDGAKMSKSYQNTIDIFASQKALKKQISSIVTDS
                     TALEDPKDYQNCNVFKIAKLFLNEVEQKELQARYEKGGEGYGHFKMYLNDLVNEYFKE
                     ARMKYDELLEKPSHLKEILELGASKARKIAQEKMQKIYEKIGL"
     gene            complement(29408..29902)
                     /locus_tag="R8X70_000364"
     CDS             complement(29408..29902)
                     /locus_tag="R8X70_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEF2928176.1"
                     /translation="MKVKNIIFIGFMGSGKSTIARALAKDLDLVFLDSDGLIEMKFDQ
                     KISEIFKEKGEAFFRQEEQKVANFLCSCNGASIASGGGFIHVLDFDKIGFCIYLKASF
                     EYLKKRLSENEIAKRPLFYDEVQAKRLYNERLNKYEQKANLILDVENKSIDELVIEIK
                     KVIK"
     gene            complement(29892..31274)
                     /gene="der"
                     /locus_tag="R8X70_000365"
     CDS             complement(29892..31274)
                     /gene="der"
                     /locus_tag="R8X70_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEF2928177.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSEISGTTRDTNKTEV
                     FINSKKALLIDSGGLDESNELFKNVKKNTLKIAKQSDIILYLVDGKLSPDDEDRQFFH
                     SLKKLGKPIALVINKVDNKKDEERSWEFANFGVKEVFNLSVTHNIGLDELYNWLENFL
                     DEQFLIPDEEENLEDFLEHYEEGKEFQFKELDQNYIRVGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESIVYKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSN
                     SQIALLVLDANEGFNELDERIAGLAAKHYLGVIIVLNKWDKTEFEFDKVVKELKLDRF
                     KFLAYAPVVSVSALSGKRVHVLLEKILEVFTNFTQKIPTSKLNDLIASATKAHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            31390..32322
                     /locus_tag="R8X70_000366"
     CDS             31390..32322
                     /locus_tag="R8X70_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEF2928178.1"
                     /translation="MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGVLFIVYLLKRSKVHKEGGHFWLLVFRGVTGTLSLYMFFYNVSNITLGGAFAFQK
                     TAPIFITLIAFIIFKENIGAKGWLGILIAFSGVLLIAQPWADSSTHSGFDLKNSIIGV
                     MSGFLAALALTSVRELRKFYTTEQIAFSFILLGALMPLISMIGAEFFEPKHLDSLHLD
                     FILAPFVMPSLTAWLIIAVMGALGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMVV
                     GIILGDDLPSAMVFLGIIGIIFGGIILVKNKGKK"
     gene            32319..33131
                     /gene="kdsA"
                     /locus_tag="R8X70_000367"
     CDS             32319..33131
                     /gene="kdsA"
                     /locus_tag="R8X70_000367"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEF2928179.1"
                     /translation="MKKMILIAGPCVIENKDLVFKVAQNLQEFNENENIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLKVLQSVKNEFGMKILTDIHESTQAAPVSEVVDVLQIPAF
                     LCRQTDLLVAAAKTKAKVNIKKGQFLNPSDIKYSVKKVLQTRGIEEEGYEVADKNGIF
                     VAERGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLA
                     RAAAAVGVDGFFFETHTNPCEALCDGPNMLDLNRLKACVKTLLEIQNIIEGK"
     gene            33133..33597
                     /locus_tag="R8X70_000368"
     CDS             33133..33597
                     /locus_tag="R8X70_000368"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEF2928180.1"
                     /translation="MTIIEGKLNLDSNTKIAIINARFNHIITDRLVEGARDAFLRHGG
                     KEENLSLILVPGAFELPFALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEF"
     gene            33597..33995
                     /gene="nusB"
                     /locus_tag="R8X70_000369"
     CDS             33597..33995
                     /gene="nusB"
                     /locus_tag="R8X70_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEF2928181.1"
                     /translation="MATRHQVRQSVISLLYALEMNEKNENFIDEFLNEKKIRNEQKNF
                     TLSLYEGIIKNLDDIDKNLNPYLNENEIEKLGHIERAILRLGAYELLFTDTPNAIVIN
                     EAIELAKELANDNSPKFINGVLDTLVKAKQ"
     gene            33992..34831
                     /gene="pyrF"
                     /locus_tag="R8X70_000370"
     CDS             33992..34831
                     /gene="pyrF"
                     /locus_tag="R8X70_000370"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEF2928182.1"
                     /translation="MKLCVALDLATKEECLRLAKELKGLDLWLKVGLRAYLRDGFKFI
                     EELKKIDEYKIFLDLKIHDIPNTMADACEEISKLGVDMINIHASAGKVAMQEVMSRLN
                     RFNKRPLVLAVSALTSFDEENFYSIYKQNIDEAVIHFSKMSYQNGLDGMVCSVFESKK
                     IKEHTNSNFLTLTPGIRPFGEASDDQKRVANLTMARENLSDYIVVGRPIYKNENPRAV
                     CEKILDKIHRKNISENDIEQNYEAMQQKEWDMCNHFEEWIKTQPDKEQALKEFYTKCG
                     IKY"
     gene            34828..>35554
                     /locus_tag="R8X70_000371"
     CDS             34828..>35554
                     /locus_tag="R8X70_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928183.1"
                     /translation="MNYQQLECDYFNLYNQFISVDFQISLFEKNHKSLIKDFIFFYHQ
                     ILKQKDLNFLLGVRNKIALKVHNYMQEYSTSPKDLSLICLREHKHIEFFQRFYKALAY
                     FVAFRKKLDEEQKIKNLISNINDCFGCHFINSDFNNLQNFQKNDFFTLPEKCLQYFHL
                     AMIHLCFMVLNPLNFKDSNRHLDKAINYLIDGAFEIYELIFKEYFLLFPKDEELKDEL
                     KKIKNLEFKILMQEVSRVKLLNHY"
BASE COUNT        12230 a         6280 c         4904 g        12140 t
ORIGIN      
        1 ttagaaaatg aaaattttaa accggatttt aaattgattt ggcaagaaag tgaagaaaat
       61 ttggataaaa atttacaaag tctaagagca agactcttag actaaaaaat tatttttcgt
      121 tcgcttcaac ttcgatattt aaattaatat catcacttaa agtaatagtt gaagtacctg
      181 gcgcaaagtt aaaatcagag cgtttgattt taccatttaa agaaaaacct actttttctt
      241 ttccatcttt acccttagct gtaccgccga tttcagtatc taaaaccaca tctttagaaa
      301 cgcctgttat ggttaaagtt cctgtcattt tacccttttc gttatcgatt ttttcatatt
      361 ttttcattac aaaagtcata ttagggaatt gttttgcttt gaaaaaatca ttttgttgta
      421 agtgattatc tcttgtttga ttgtctgtat ttacagatgc tactttaatt gttgcttcaa
      481 gttttttaaa ttcaaaactt gcaggatcaa agtcaattac cgcatcataa tcttgaaaat
      541 ttccttttac attgctaatt tgcaaatgtt taattttaaa acctacatca gtgtgagttt
      601 tatctaaagt atattcttta gcaaataaac ctgcactcaa caaagaagct gcaacaagag
      661 agcttaataa aatctttttc atttttttcc tttttttgta tttttatgta aaaagaattc
      721 taataaacaa aaaacaatca accattaatg ataattttag tccattttat ttttaagaaa
      781 aatcacaaat tcatcaaaac taggcaaatt taagtctttt aattctcttt gctgcttgcc
      841 ccacatacat tctggaaaaa aagcatcctc tttaaatctc gccattatat gaaaatgtac
      901 ccttggaaca tagtttgcaa aagaagcaat attgattttt tcaggtttgt aaaattctat
      961 catagccttt tcacatcgca aaattttgtc aaaaatttct ttttgaagtt catagggaca
     1021 atcgctaaat tctttataaa cttgcttggt aaaaatttta atccatggca cttgagcttc
     1081 ctctttttcg atataaatca agtcattctc ataaatcatt aatcttcctt taaaattgta
     1141 ttgattgtta ttttacaaaa tttatcaaaa ttttaagtca aaatgcgtta atattgtcta
     1201 aaatatacaa aaaaataaag gaggaaaaat gcaaattggc ttaaattaca actatgctag
     1261 caattcctct tattatgata aaacacaaaa aaataatgcc gaacaagaaa atacagaaaa
     1321 tacaaactca caaaataaag actcaaaaca aaacaatgaa caaactcaaa tgataaatgg
     1381 cgttgaactt accatacaac aagtacaaca agtgcgtgag cttcaaagta tagacagaaa
     1441 tgtaaaagct cacgaagcag cacatcaagc cgctggaggt ggtttagctg gagctgcaag
     1501 ctttagctac acaagaggac ctgataatca aatgtatgcc acagcaggtg aagttcctat
     1561 aagaatgcaa aaaggaagga cacctgaaga aactatcgcc aatgcgcgtc aagtcgttgc
     1621 agcagccatg gcgcctgctg atcctagtcc gcaagattat aaagtcgctg caaatgctct
     1681 aaaaatggaa tttgaagcaa gagctgaagc aacaaaactt aaagcgcaag aagcacaaga
     1741 gaaaaaagaa gaaaacgaag aaaagcaaga aaatcttgat ataaataatc aagattctaa
     1801 agataatttc gaagaaacac aagcaaacaa agactttaaa aatttcattg gcaaaattta
     1861 tcaacaaaat tcacaaaata atccaatcaa ttttagttta gtttcttaaa atatttttga
     1921 tgacatttta ataaatttct atatcttgag aatttagctt tctataagca gcacaagctt
     1981 cttggtgttt tttatcgcaa gccataccta aatatctctt agcctttttc aaatcttttt
     2041 tctcaagctc ataataacgt ccgatcaaat aacaagcctc tgcaaaacct aaagtacaag
     2101 atttagaata aaaagccaaa gctgatttaa gattttgcct tacaagctct cctctttcat
     2161 acaaaaagcc taatttatag caagctctag cgtcttttaa atcgcaagat cttttataaa
     2221 aatgcgtagc catttgacca tctttttcat cttcataaac caaacccata tgattacaac
     2281 ttgaagattc acctaaatta caagccttgt taaatgccaa aagggattca ttaacataac
     2341 ctagatcttg taaggttaag gccatattag aacaagcctt agccaaaccg agtttgcagg
     2401 atttatcata aaatttatac gctttatcaa aatctcttgc aactccttga gcattttcat
     2461 tcatataggc taaagaaaag caagctctag cattgtcttc ttcgcaaagt ctttcaaaaa
     2521 tttcatatgc ttttacaaat ttatttccct cataaagcct taaagcatta tctaaatcat
     2581 ccacagcaaa aagagtgtga aaaaataaag ataaaatgaa aaatatcctc ataaattttc
     2641 cttcaataca cttctgactt ctaaaatttg ctctttgcgt ttttgtaatt ctactttttt
     2701 taagtctaaa attttatttt tttcttgaat tatatttgta ttttgttcta aaaaatgatt
     2761 agatattttt actaaaatcg gtttattgat aagcaaagct tcaaattcat aagcattaag
     2821 ctcagttaaa accctttcat aaatttcact ctttttagga taaaaaagcg taaattcgga
     2881 actatctagc tcataaagaa ctcgactttc attgattttt ctactgaaaa atgccaagct
     2941 taattttgta gcgtttgcat aatttgcaaa agctttgaga tttaactttt caaaaaataa
     3001 atccaactct agcaaacttt taaataaaag ctctttaaag tcttttaaaa agtactcatc
     3061 gcttgcattg caaaaagccc taagttcgct aaaattttta tcgctttgca agatattatc
     3121 tttttgtata tttgaaaatt cagctttaaa aagcaaaatg tctttttcta aattgtctat
     3181 aaaatctttc aatttttgtt ttattttttc aaatgattcg taaatttcat ttttgatttt
     3241 tttaaattct ttattcatta tatcgctgtt gtaaaacatt gccaaaaaag catcatcgct
     3301 cgaaataaaa ggagctttat aatcgtattt tacatacaaa tcttttttca aaaatccctt
     3361 ggcttcttta taaaaatgag cctctttttc tttaatgcaa ttaaaaattt cactcgcaat
     3421 tctttcgcca atgcttttaa gcttatttaa aatttgatga tttaaaattt gaacttcttt
     3481 tataaaatca tcaaaagaag aatttaattt ctcttgataa atttgaaatt gatttgcaag
     3541 cttatcaaaa atatccacaa aaagcctatt ttcatcctct aaaacttgac ataaatgaag
     3601 catttttctc tttgtaaatt tttgttttaa ggctttctca tctaagttat ctaaaaaatc
     3661 taacaaaaga ttaaaattag attcttcata ttttgtttca tcttttgctt ccttgcaaga
     3721 aatggcaatt aattctttaa aatatttaga aaaaactgtt ttggcataat ttaacacatt
     3781 ttctaattct tgagcgctaa gcttatcttt ttgatttaac acacaaatgc tattttcacc
     3841 caaaagctcc aaatttgcct ttataacatc ttcttcgctc ttttttcctg cattatcgat
     3901 caaacttaac caaattgccg cgtggatatt ttggagctcc tttagggtgg ttaaagtatc
     3961 atcttcatta gcattaagcc ctggagtgtc cactagggtg atttttttaa gcaaaggtat
     4021 gggtgcaaaa atatgcaaac tttttgtttc ttttacatta tttctttgat ctgtgtattt
     4081 tgccaactcc tctatatgag tgatttcatc acttccatct tgaaattcaa ctcttaaaaa
     4141 atactcatcc gcataacgca aaaaagtggg tttaaaagta acaggcacta ctccagtagg
     4201 caagcattct ttttttagga ttaaattcaa aagggttgat tttccacttg aaaattgtcc
     4261 tatgatagca atattaatat ttttatctaa agaaaaactc aattcttcaa gctcttgaat
     4321 aagattatag cttgggtgca tgaaaggctc atttagtttt ttacacaaca ttttaatttg
     4381 cccttcaaaa cttttatcaa aatctatatt ataggcatct tcataagcct ttataaaatg
     4441 atttaaaata ttaatttgca ttcataagct ccacttcaag ctgttgtaat tttgcaattt
     4501 tttccaaatt tccctcataa gaaaataaaa tgtcagcatt ttgattttta agattattga
     4561 ttaaatgttc aatactcgct aacttttctt tttgcaatac ttcataattt ttcattcttt
     4621 cattcaagaa agcaaaaaag gcgccattga tatccaaatc ctttaatata gcacctatat
     4681 taaaactttc aaaagtgcta aaaatcactt ctgttaattt tgtttcaagc tcaaataaat
     4741 cgactttggt agagataatt tgctcgattt gcagtcttaa caatgcaaat ttttcatcac
     4801 taaaaatatt ttctatcttt ttagaaattt catctttaaa gccttcaaat ccattgtcaa
     4861 aatcatcttt taagaaatca tattttaaag ccaaacttgt ttttaattcc tctatttttt
     4921 taatattttc aaatttaact tctcttaaaa tatcattaat accatcttta accgtgatat
     4981 ctatcatatt taaaatacga ttaatgttaa ttttttgggc tttatctttt agatatttaa
     5041 tctcatcaat caaacgctct ttgagctttt tagccaataa taaaacaaga ttatccaccc
     5101 cattttcaaa attttcaaga tttaaaatcg aatttgaaat ctcttctttt gcctccttaa
     5161 gcgcttcttc tttagcctta aattccaata aaagtttatc attttcttcg cttaagcctt
     5221 gcccgtcttc ttttataagc ttgttttgca tttcatattc atttaaaata tttctaagtt
     5281 ctaaaagcaa ttctttttta taggcttgta aaataatttt acttttttct ccagaataaa
     5341 gctcattaaa aagatattcc tcaaattctt tcatgccact tttcttaaag ctttcttcag
     5401 aagataaacc cttgtaaaaa tcacttgcca tttttgcgct tacacataaa aaatctatct
     5461 tttctatcaa atgcgtgtca aaattttcaa gtctagcctt aagactttct ttggtgtaat
     5521 ttatcacttc atctaaatct ttttggctta acaaatccgc cttggtaagg acaattaaaa
     5581 atttgctaag ccgagaattc aataaacaat ggattaaaaa ttcagcatct ttttgtgtta
     5641 aagcttgaga agcattcata agatggatta aaaaatcgct ttctttaaga tactcattag
     5701 ttagaatttc tctttgcacg actatatcat caagtcctgg agtatccact atagagatat
     5761 tgttttttaa aaattccaaa ttgcttttga tttctatctt cttaataaga gcagaaattt
     5821 ggtttttagc agaactaaac tctttaagct cctttagatt gattttttgt gttaaagcct
     5881 tatcttgaac atattcttta atatcgattt ttaaagcaag ctcatcgatg aattctttaa
     5941 gctccttgct aaatttggaa ctttttaata tattatccca ttcttgagta tcccaaaaat
     6001 aaatcacggc ctcttgagta ttgccatagc ttaataaagt caaattcgcg gtttcaggga
     6061 tattagaaac ccccaaaaaa tcctctttta aaagcgcatt aagcaagctt gattttcctg
     6121 aattcataac acctgttata gctatattaa attctaattt ttgaaatttc tctaaagtct
     6181 tttgaagtct tattttgcta ttttcatcaa aactcaattg actaagttcc atattgatat
     6241 gattaagctc attaaaacca ctttgaaaca aagctttttt atcgatactt tgaacttgaa
     6301 tattttgtat atattctaaa atttcagcat tgtttgaaat tttttgcaaa attcgcaagg
     6361 cttttaataa atcttgttta ggtataaaac cctccctaaa catatttaaa acacaaattt
     6421 gagctttttg aacgctaaaa atatctactc ttaaatcaat ttttttacaa atattgctaa
     6481 attcttttaa gagaaaatat ctttcataat tatccttatt aacactcaat atgatagcaa
     6541 gttcggaaac atcaagaata tttttatctt taaagcttgc attaaaatct aaaagctgga
     6601 gttcattttg ccagagtttt tggagtaatt ctttcataat tttccccttt ttaaggggaa
     6661 aatattattt atttctttga gcaacaagtt gtcttctcat ataagcaatt ttgctttgta
     6721 aaggtaaatt tttaggacaa ttatcttcgc aagccaataa agacatacat ccaaaaacac
     6781 catcatcatc gcccactaat tcatagaaat cttcaactgt tctatgatcg tgcggatctt
     6841 gtaaatatct agctgttctt aaaagccctg ttgctgcgat aaaattcggg cgcataagct
     6901 tagttgcaca cgaagccaca caaattccgc actcaataca acgatcaagc tcaaaagttt
     6961 cctctgctac ttcaggttct atgcgttctt caatttttga aatatcggtt tctttttcat
     7021 tatgtaccca actttcaaca cgcttacaca tatcctcaaa ccactcgcct gtattgacac
     7081 tcaaatcctt aatatgtcta aatgcaggca taggcataag ctcgataact ccatcagaat
     7141 aatcttttgt taaagtctta caagcaagct ttggcacacc attaatcatc attgcacaag
     7201 atccacaaat ccctgcacga caaacaaagt caaaactcaa atccgcatcc attttttcgc
     7261 ggattaaagt caagcacaca aaaactgtca taaaaggagt ttcttcaagc tcgtaagtta
     7321 caaaatgagg ttttgaaatt ttgcttaaag gattatattt aaacgccttt atcgttaatt
     7381 ttctactcat aatccactcc tattctttga tttagcgctt tatattttgg ttgtaattca
     7441 taaggcatta aagcgtgctg aatttcgtga cgatttttac cttcagcttc cattttttcg
     7501 cggattgcat caacttcagc ttgacgcttt tcacttaaag gattttctat gatattacct
     7561 ttagcaccat acccacggaa tgcaggtggc atttccattt tcataatatc aagttcatcg
     7621 tattcaacac gaggcaagct ttcgccctct acccagtaag ttaaagttct cttcatccag
     7681 ttcaaatcat ctctttttgg ataatcctct ctatagtgcg ccccacgact ttcagttctt
     7741 aataacgctc cataagctac acaaagtgca actttaagca ttcttggaac tctataagct
     7801 tcttctagct cagggtttgc acaatcaagc tctttacaat gtacttttac attttgagat
     7861 tctttataaa gtttttcaag ctcatcaaca gcttctttta agccttcacc tgttctaaag
     7921 attgctactt tatcccacat gatttctttc attctatttt tgatttcaaa aacagaatat
     7981 ttaccttctt tatctactaa agattttaaa tattggtatt cttttgttaa aaagtctttt
     8041 actatatttg tatcgataac ttcaccatta tttttacaat aatctgcaaa ataatcccct
     8101 ataatcatac ctgcaacaac ggtttcagca cagctatttc ctcccaagcg gttaaatccg
     8161 tgcatatccc aacacgctgc ctcgccacaa gcaaaaagac catctaacca ttgactctcg
     8221 cctgtaggtt ttgttctaat gccacccata gaataatgct gcataggtaa aactggagcc
     8281 caaccttttg gaccttcatc agcaggatca ataccattga aagttttgca aatatcttgc
     8341 acatcacgaa gatttttttc tacatgtgca cggccaagta tggaaatatc aagccacaaa
     8401 tgatcgccat aaggactttt tacaccctta ccttttctaa tatgctccat cattctacga
     8461 cttaccacat cacggcttgc aagttctttt ttctctggtt cataatcagg catgaaacga
     8521 tatccatcca catcacgtaa aattccacca tctccacgac acccttcagt aagtaaaatt
     8581 ccacttggga caataggcgt tgggtgaaat tgcacagctt ccatatttga aagtctacaa
     8641 agtcctgttt caagagctat agctgcacct gttccttcgc agataaccgc atttgtggtt
     8701 tgcttataaa ttctaccata accacccgtt gctatcattg ttcctcttgc aatataagca
     8761 atcagttgcc cattagttaa atcccttgca attacaccta agcatttttt gccatcatgg
     8821 ataactctaa ccgcttccat tctatcgata atttttacct gatgtttgat agcttcatta
     8881 gctacgccat aaagcataca gtggcctgta gcatcagcta tataacaagt tctccatttt
     8941 ttagttccac caaagtcacg agcattgatg agtccatgag cctcttctct ttcttcgatt
     9001 acagtttttt gtgcgttaat aacaactgtt cttggtcctt tagttaccct agtccaagga
     9061 accccccaag aagcaagttc gcgaacggct tttggagcag tttgtgcaaa cattcttgct
     9121 acttcttgat cacaacccca gtcgcttcct tttactgtat ctgcaaagtg taaatcttcg
     9181 ttatcacctt cacctttagc accatttcct aaagaagctt gcatacctcc ttgcaccgct
     9241 gcagagtgag aacgctttac cggacaaata cttaaaagtg ttacactttg accacttttt
     9301 gccacctcta ttgcagctct aaggcctgcc aaacctccgc ctattactaa agcatcacta
     9361 tattgaatat tcataatttg ctccattata agtttttacc attgcagttg tttgactttg
     9421 atagttttca aatccaattt tcgcaaatgc tgcaagactt aaaactccta aaaccaagaa
     9481 gaaaatgctg attatccatt ttgccatctt gagtttttta cgacttttgc gaatatcttt
     9541 aacatctttt gcttcaaacc agccccattt tacacaaagt ctataaagcc ctatactacc
     9601 atgcaattcc acacagatta aaagtgcgat ataaaaaagc cacataaaat gattgatcac
     9661 cctatcacct gacatatcag cagaaatttt atctccattt gtgataacaa aaatcaagtg
     9721 cgcagagcct aagaaaaaca ttacaaaacc tgtaaatgct tgaacaagcc ataatgaagt
     9781 atcaccatga ttcatttttt tagcatgagt tctaagaatt tggtattggc gaaaattaat
     9841 aggaaatttt ctcatagcca ataaagcatg cacaaaaaac accaccaaaa cacaggcagc
     9901 taaaaacgag gtaatataac tcatcattgg atcgttataa atgaatttta attccaaaaa
     9961 atggacaacg gaattaaaaa aatccttact caccaagata gtagatacaa aaaccatatg
    10021 tacccacatg aaaagaccta gaaaaagccc agaagcactt tggataaaat ctaactttgc
    10081 aggcatttta ctttttttgc catcaatgct cttacccaaa tacccttcga taagctcact
    10141 catcttcact cctttataga aagaaattta aaaaatctct tcattatagt acaatagcct
    10201 ttaatacaca ttaaatattt acttttttaa actttatgca aatataaaat aacaaggctg
    10261 ctacaaacat aagcaaactc aaaatttgtc ccatgctcat accccaaaaa ataaagccta
    10321 aaccaaaatc tggttcacga taaaattcac atacaaaacg cgccaaagaa taaacacaag
    10381 cataaacaag aataagttca ccttgaaatt tttgtttcat ttttaccaga taaataacaa
    10441 taaaaaccac aactccctct aaaaaggctt cataaagttg tgatggatgt cttaaaactc
    10501 cctccacata aataccccaa gatacatcgg taatgcgtcc aaaaagctct tggtttaaaa
    10561 aatttcctat acgaccaaaa acataagcta aaggtacact caaagccacc aaatcaagaa
    10621 atttccaagg attttctttg tattttttac aaaataaaaa agtagctatc aaaaatccta
    10681 taatcgcacc atgataactc ataccacgaa tgcctacaaa ttcaccattt gcataaggat
    10741 tgaaaatttg ccaaggatga gtaatataat acatagtgtg tgcatcataa attaaaatat
    10801 atccaagtct tgctcctaaa atcacgccaa tttccaccca aataaaataa ctatctaagc
    10861 gtttttcatc gatatctagc ttaaattttc ttacaaaaaa tttcgctaaa agtaaggcta
    10921 aaagtaaggc taaaacatac ataattccat accaatgtac tttaaaccct aaaacactaa
    10981 aagccacaac atcaaaattt gaataaatat tttgccaaaa ttccatactt tttccattat
    11041 ttattttgta aaaatatagc aaaaaaactt taacttgcta taattaaaca taatttctta
    11101 tcttaaaggt taaaaaatga aaaaatattt cttatttatt attgctttat ttttagctgc
    11161 ttgcagtggt gctagcaata attttgtgca tgtttcaatg cctaatttca aacctcaaac
    11221 tcctacaaaa gtagagccta tagattctgg ggtttcaatc atgctagaac ctataaatat
    11281 agaacaaaat aataattatt cagattattt tgaaaactct gtacttaaaa ttcgcattga
    11341 caaggaagtg gctcttttaa aagaaaattt agaagaacaa tttaaaacca tagcacagct
    11401 taagggctat aaaatagtaa cttcaaatcc tgattacact cttaaaagtt tgataaatgt
    11461 tcttatagaa gaaaaaaata tacaaaaatc aaataatttt atgagtggag agtctgttaa
    11521 atctaattta ggaattaaat ttcaaggaaa aattgatttt attgatcagc acaaccctca
    11581 aaattcgacc aatctaacaa gccataccaa acttgactcc ttggtggatt taaattaccc
    11641 tattaaaacc aaagatggaa taaatatgtt taaaactact atttcaacag tacccacaca
    11701 actcaataaa ggtctagaaa agccagcttt tgaaatagat aaaagttttt tacattttta
    11761 taaaaatact ttaaatacac tctataataa tcttccaaaa gccacagata taggaaaaac
    11821 tgtaccaaat agcaatactg attctagcgg ctttaatcat tttgatacca acacaatatt
    11881 tgaagaaaat ttacctcaag aacaaaattt ggataatagc tcgcaagata tttcttttca
    11941 agagcaaaca tcttcaaatt caaatataca atatgaaaat aacacaaaca aaaatcaaga
    12001 tggggttatc atttttgaat gattagccta aatagtaaat aatactttga tttctcttgt
    12061 tatatttgat attttctaag agaaatcaaa aaaatcaaaa ctctaacttc agagcttctt
    12121 gcatggcatt tttaatcttt tctcttttat ctttgacatc aaaaaaaagc tcaaaggcaa
    12181 aaacagcttg ccataaaagc atatcaaacc catcttttac ttttaagtta tgctctttgc
    12241 ataattttaa aaaagaggtt tctttgccat aaatgacatc aaaggcaaat tttgctctgc
    12301 ttaaaatttt atctaaaagt attttatcgc aaggtagatc atcatctttt aagcctgccg
    12361 aagttgaatt aaccaccaaa tcaaaatcaa aatcatccaa ggcattataa agactggttt
    12421 tatataaagt aaaatcctta aatctttttt cgctacgatt tgccacacaa acctctactc
    12481 ctttttgctt taaagcaaat gctagagcaa gcgcagtccc tccagctcct aaaatcaaag
    12541 ctttattaat actttcaaat tctttaatag cttctaaaaa acctaaggca tcagtattgt
    12601 aagcataaat ttttccatct tttaaacata aggtatttgc agagccaata ttactagcaa
    12661 gctcatcttt aacatcagcc atttccaaag ctgcttcttt aaatggcaaa gtgatatttg
    12721 ctccttgaag ttttaattta aaaaaatcct gtcttaattg atgataatct tgtagatgat
    12781 agcgtgtata aataccatca agcttgagaa cttgaatggc attgttatga attctaggcg
    12841 acttagaatg cgaaatggga tcgccgatca cagctaaaaa tttcatttta aagtgaaaga
    12901 aaatgcgtct ttagctactt cttttctaat tttagctaat tctgctgcaa catttgcttt
    12961 ctcaaaaggt cctattaaaa ccttagtgat ttcttttcca cctactgtag ttttataaag
    13021 cttatattca tagccttttt gttttacagc tgctagctct cttgattttt gatctaaatt
    13081 gctcactgaa aatatctgaa cataaatccc agaagctaga ccatttggat gaacaggttt
    13141 agcatctaca tttttaaaca aatcattagc attggctttt gactcttgtt taggtgtttg
    13201 ttttgcaggt tcttttttta cgacagtctg ttttgcttct tcttttggct tactttcttg
    13261 ttttacttcc tgcttaggag gtgtagtatt taaaggtgcc actttttcag aatttgtcgt
    13321 atttggctca gcaggcactt cttgatcagg catagttaaa ttgatattat catttgcatt
    13381 aggagctggt gctaaagaat tatcattttg ctccccttga atctgtcttc ttaaagcttc
    13441 aaattgatct tcagctgaag tattttcagt aattggcata ctctcaaaag aatcagtatt
    13501 attatcttgc gttatattta aggattcact tggtaaaata ctttgatttt cagtattttc
    13561 ttcaccacta ttaatgagtt tcataactat cataatcact agaaataaaa ttatcaaagc
    13621 aatgacgcgt aagagaattt ttttcatttt ttcactttta ttactttttt ccaaaataat
    13681 atcatcaaat tcatttttat tattttccat aatattcctt tcttacatat gtttagacca
    13741 agaactgcct cgttcttttt gatagacttc atagggtagt attaatatat taaactctct
    13801 aggaatatcc atacttggaa acaccttcca ttcaactggc attttacttg caaacatcat
    13861 tgaaagttta gacgctaaag aataaccttc gtttaacgca gtgtgacctt tgtgaatata
    13921 aagatgtaaa tgacctggag tctttgtttt gtaagctgta aaatttataa aaccttcttc
    13981 acgcaaaata agctgcgcac gatgataaaa tctttcagca ttaaaaccat tataatcaaa
    14041 aacaatattt tctactttat tgtctttggt gatcaaatca tgagcaacaa cgattttctt
    14101 cgctgcatgt tctctcatga tatttaaatt taaaggagca tcaatccttt caaatttatc
    14161 aaaaaataaa cgacctcgat gtgttatttt tttcataatc ttatcgcgtc gtatataata
    14221 atggtcgcta attattttaa tcagcgacag atccataggt gaaatcaaaa cattgccttt
    14281 tcatagatta taaaattact tgcaagggtt ttgagttttt ccttaatttc tttttgcaaa
    14341 tgagtatttt gaatatcatc taaaatatca gctatatagt tagcaactat ttgaatttca
    14401 ttttctttaa aacctctagc cgtaagggca ggcgttccta atcttaatcc acttgttaca
    14461 aatgggcttc tagtttcgcc aggcacggta tttttatttg ctgtaattcc tgcattaccc
    14521 aaagccaaat ccgcatcttt tccgctaaat tcacgctcta aaaagctcat caatacaaga
    14581 tgattatctg ttccatcact tacaagctta tactttctat ccattaaaac tttagctaaa
    14641 gcttgcgcat tgcttcttac ttgcttagca taaattttcc attcttcact aagattaaat
    14701 ttaaatccca cggctttagc tgcaataaca tgcatcaatg gtccaccttg gatacctgga
    14761 aaaatagctg aattaatttt tttagcaagc tcttcatcat tagtcatgat gataccgcct
    14821 cttggaccac gtaaggtttt gtgggttgta gagcttacta catgagcatg aggaaatgga
    14881 cttggatgct cacctgctac aacaagtcca gcaatgtgtg caatgtctgc aaaaagataa
    14941 gctccaactt catccgcaat ctctctaaat tttgaaaagt caataatacg agcataagca
    15001 ctcgcaccgc acacgataag ctttggtttt acaatatgag caatttccct aactttttca
    15061 tagtttatcc ttccatcaag ctctacacca taaaaaaagc tctcatacat ttttcccgat
    15121 gagcttactt ttgcaccatg tgttaaatgt ccaccatgac ttaaatccat tcctaaaatt
    15181 ttatcacctg gatttaaaag tgcagcataa acgccttgat tagcttgaga acctgaatta
    15241 ggttgcacat ttgcaaaact acaattaaaa agttttttac atctttctat agctaaattt
    15301 tcgatttcat ctacaaattc acagcctcca taatatctct tacctggata accttctgca
    15361 tatttgttag ttaaaacact tcccattact tccattactt caggcaaagt gaaattctca
    15421 cttgctatca tttcaagacc ttcgcactgg cgcactaact cttggttagt taaatcaaaa
    15481 atttccttat caaactgctc taaactcatt ctttatcctc ctttaattct gatttcaatg
    15541 gcctcatagc tggaaacaat atcacatctc gaatagattt tttatttgtt aaaagcatca
    15601 ccaatctatc tattcctata ccttgtcctg ctgttggtgg cataccatat cctagagcat
    15661 ttacaaaatc ttcatccatt tcacacgctt cttcatcacc tgcattttta gcctcaattt
    15721 gttttaaaaa tctttcatat tgatctaaag gatcatttaa ttcgttaaaa ccattggcta
    15781 attctctacc acacacaaaa agctcaaagc gctctgctat ctcagaattt ttgtcactac
    15841 gacgagaaag tgggctaata gatattggaa aatctgtgat aaaagtagga tcaataagtt
    15901 tactttctac ataattatcg aaaagctcgg cttgcaaatg ccctaagtca agcttatcat
    15961 ttgcttcaaa gccatctttt tttaatttct ctaaaatctt atctttattt tcaataattt
    16021 catcgcttaa agcaccatac tttttaagcg catctttata agtaattctc tcaaaaggtt
    16081 tggaaaaatc gattttttgt ccatcaaatt ctatgatttt tcctaattgc aatttttcta
    16141 aaagcaaggc aaaaagttct tcagtaagat ccattaaatc tttataatta tgataagccc
    16201 aataaaactc aattgtagta aattcagggt tatgagtaag atccattcct tcatttctaa
    16261 aacaacgatt gatttcaaaa actgcctcaa aaccacccac tacaagtctt tttaaataaa
    16321 gctcaggtgc aattcttaaa aatctctcaa cccctaaaga attatgaaaa gttacaaaag
    16381 gtttagcatt tgcaccacct gcaatggggt gcatcatagg agtttcaacc tctaaaaagc
    16441 ctttttcttc aaaaaaatga cgaatcaaac ttacaacttt agaacgagtc agaaaatctt
    16501 ttctaacctc tgcattcata atcatatcta cataacgctt acgatatctt tgttctatat
    16561 ctgtaagtcc atggtatttt tcaggcaaag gtactattga tttagttgct aaagtgatct
    16621 cacttgcgtg caagctaaac tctcccgttt tagtaacaaa agggaagcct tttgcaagga
    16681 tgatatcacc cacttcaaga ttttttttga ataaattaaa tttttcctca cctaaagaat
    16741 ctttactaaa ataaatttgc aaattctcat tctcatcttc tatattagca aatatagatt
    16801 taccagcaat tctaagaagc tttaagcgtc cagaaatgac agaagagata ctttcatcgc
    16861 gtttattttc agtatcaaaa atatagctaa atttcttttt aaaatctgct agagaaagtt
    16921 ctttaactaa aaaatgtgga taaggattta ctcctgcgtt tttaagctca ttagcctttt
    16981 gaattctttg ttgttctaaa atattgtcaa acattaaatt tttaccttag ctttttgatt
    17041 acaattatta cacacaccat aaagttgcat taaatgtccc gtaagtttaa atccatgctc
    17101 tttagcaatc aaggcttgct gtctttcaat gataggattt tcaaattcta taatttttcc
    17161 acaattttta caaatcatat gatcatggtg tggtttattg gcaagctcgt atttttttcc
    17221 agccgaacca aatgatatag aagtaaccat ttctgcttct tcaagcaaat ttaaagtcct
    17281 ataaaccgta gcaataccta cattcaaatc cggttctgct tgtttaatct ccatatataa
    17341 actttcagga gtataatgtg tatcactatg atataaggtt ttgagtaaga tttctctttg
    17401 tttggtatat ttaagaccac cttgtcgtaa aattttctta aatctttcta gtaatacatc
    17461 gtattctaca ttctcaatca acatatttta ttctccttga gtagtactta aatcatctct
    17521 aatatcttgc aaattttgat caatttgacc caaactactt gttgttagag actgattcat
    17581 tataaatgat cctatatttt taagaggagt taaagtaaaa ctattttggg caaattgatt
    17641 taatttatca tttaaaaaat caatacgcgc cacacaaaaa actaaaattg caaaaattaa
    17701 aaatactttt gcacctccaa aaataaaccc tcccaaacga tctaaaaatc ccaaaccgct
    17761 taatttaacc aatttagaaa taaaattgcc aagcacgaga caaattatcc aaaaaataat
    17821 taaaattgct aaaaatcctg caaaattagc caaactttga ttttctatct tatagaaagt
    17881 attttgaata aattctgcag cttgcgaagc gtattttgaa gcaataaaaa caccaccgat
    17941 aatcccgagc aaaccaaata cttctttaat caaaccactt acaataccct taagacctaa
    18001 aagtagagta aaacctaaaa taaaagcatc aaaccagtaa aattccatat tttaattcac
    18061 cttaccaaag catttaaaaa tcacttaaaa ttataaatta tacaaacaag aaccaaacac
    18121 tagattaatc actcaatgat tttaggaaca atgaaaaaat gatcattgct ttttggggca
    18181 tgatttaaaa ccgtttctac tacattgcta ctattaacac tatcacttct aaaaggtgct
    18241 ccacctttaa tggtgctgat tgtaacttct gaagaactta aatctaattc atttaacttc
    18301 tcaacaaaat tcacaatctc actaagttcg caaatcactt cacttctttt ttcttcttca
    18361 atttgtaaag cacttagttt ttcaagcttg ctaagcaatt tttcatctat ttgcatctta
    18421 aaccttacta aaataaagtc aatttttaaa attatatcat aaaaagcttt aaattgttta
    18481 ggatattttg taatttatat gatacaatac tgcagttttt taaaattaaa aattacaagg
    18541 ataaattttg ggattaaaag ataatttaaa agccgtaaaa gcagaaatca ataccgaaga
    18601 acaattcatt gaaaatttta tcaaaggtga gagatttata aaaaaatata aattatatat
    18661 atttgcactt atagcaattt tgattatttg gttgactata agctttatca gtggtaaaat
    18721 cgaacaatac aatatcgaag aaagcaataa aatttacaca agtttattaa acaacccaaa
    18781 cgatcaagca cttcttgaac aacttaaaaa taaaaatgct aatctttatg caatttttct
    18841 aatgaaagaa ttagcaaaag atatcaacaa taccgagatt aaaagtcagt tgcaaagctt
    18901 aagtagcaat tctgatgcaa atcatttgct taaaaatatt atttctcttc ctctaggaga
    18961 aaaatcgata tttttaaaaa attacgataa aattttacaa gcttatagac ttttaggaga
    19021 gggaaaaatc gaacaagcta atattttact ttctcaaatt aaagatgact cagccctaag
    19081 ccagattgct aaaaatctaa aacactatca aggcatttcc cgatgagaca gtttttttta
    19141 atctcatttt gtcttatttt tctttgcgct tgtggaacta aaagacaata ctttgaacct
    19201 tcacaaaccg atggaaagct aagttctaac gatagcttaa aatctagtat tgtggattgg
    19261 aatacaattt cggcaaaact caaaaacaat caagtaattt taaaaaatga tgcaataatt
    19321 gaagatttta aactagataa gggctatata cttttagcat atcaagaggg tgaatttatc
    19381 gaagcagatg ataatggaaa tttaaaaatt tacaatagtt ctcatgatga agtttattct
    19441 tacaaatttg atgctgcagt tcttggagta gctttacatg gagatgattt agcacttgtt
    19501 ttagcaaaca atagcattgt tttagccaat cgctccctag gtataaaatt cagccaaaac
    19561 ctaacacctg cacccgcaca agatagtcgc gttgcaaatc ctatcttttt agacaatatc
    19621 attatttatc caactttaga tgggaaaatt acaatcgtat caaaaaatac ttttgaagtt
    19681 gtcaaagatg ttgtgatttc agcagaaagt ttttttaaca atgtcattca ccttgatata
    19741 aatgatgata aaatgatagc tgcaacagct aaaaaagtta tagtagtaag ccctgctaga
    19801 actctttact tggatgctga tattaaagat attgcactag atagcaatgc gctatttata
    19861 ttagaaaaaa atggcaacat cataaaaaca gactataatc taagaaaaat cacagagaaa
    19921 aaatttgatt ttgctatctt tacaaaagtt agcatacaca atgaccatct ttacgctttt
    19981 gagaaaacag gctatttaat caaatgtgat ctcaatcttg aaaatattca aatctttgaa
    20041 cttccaaacg cagttgaaaa aatatctttt atgggcaatg gaaagtttta ttatggagat
    20101 aaaattttag atttattatg aatattttaa atgaagcaat gaaggtttta aagctgaatt
    20161 taaaaccttt tgatttaaca aatttaacaa aaaagaaaac ttatctttgt gctttgaatg
    20221 atgaaaattt acttttaata tacacaggaa aagcaagatt tatcaacaaa gatgctatat
    20281 ttataaacaa cttagccaat gattttgatc taaaatacaa atattttttt actaaaagcc
    20341 ctctgtgctc aaaggcaaaa cattaccttg aagaaaaagg atttcatatt catgctattt
    20401 tgtgatattg gcaattccaa tgctagtttt ttagatgata ataaattttt tacccttaat
    20461 atagaacaat ttttagaatt taaaagtgaa caaaaaattt tttatatcaa tgttaatgag
    20521 cacattaaag aacatttaaa agcacgcaaa aactttataa atcttgagcc ttattttgta
    20581 tttgatacca tttatcaagg cttgggtgta gatcgaatcg cagcttgtta cactatagaa
    20641 gatggagttg tggtagatgc tggcagtgca attacggtag atatagtatc aaattccata
    20701 catttaggag gtttcatctt accgggtatt gctaattata gaaaaattta tgctcatatt
    20761 tctcctagat taaaacatga gtttaatacc caaatcagtc ttgatgcctt cccgcaaaaa
    20821 acaagcgatg ctctaagtta tggagtgttt aaaagtattt atttgcttat aaaagatgct
    20881 gcgcaaaata aaaaacttta ttttacaggt ggagatgggc agtttttagc aaattatttt
    20941 gattatgcta tttacgataa acttctcatc tttagaggaa tgaagaagat tatacaagaa
    21001 aatccgaatc tactttttta atttgtaatg ttacaaaaat tctcattctg tatattcttc
    21061 aatcaaattt aactttttat aaaataaatt ggattacact tttatttaga aaaattaact
    21121 ttactagaag caaaaaaagg aaaaaaaatg actcaacaag aattcgatgt aattgtcatc
    21181 ggagcaggaa tttctggagc agctctattt tacgagcttg caagatatac tgatattaaa
    21241 aatattgctt taatagaaaa atatcatgct cctgcaacat taaattctaa aggaacaagc
    21301 aattctcaaa ctattcattg tggagatatc gaaacaaact atactctaga aaaagctaaa
    21361 aaagttaaaa gaactgctga tatgatagta aaatacgggc ttttgcaaaa tgctcaaaat
    21421 caatttatgt tttctcatca aaaaatggcc ttggctgttg gtgattcaga atgcgaatac
    21481 atgaaaaaac gccatgaaga atttggcgaa ctttatcatt atatgaaatt ttttaataaa
    21541 gataaaatta aacaaattga gcctaaagta gctcttggag aaaatggcag agatgataga
    21601 cctgaaaata tctgtgctat gggagtcgaa gctggagaag tttttactac agtagatttt
    21661 ggaaaaatga gtgcaagttt ggttgaacaa ggacaaaaac aaggcaaaaa tacctttgta
    21721 gctttcaatc aagaaattgt tcatatagag aaaaaagatg atatttttat cttgaaaaca
    21781 aacacttatc aagaataccg ttctaaggct gtagttgtaa atgctggtgc acattctttg
    21841 tatctagcac ataaaatgaa tttgggtatg gataaatctt gttggcctgt agcgggaagc
    21901 ttttatttaa ccaaacaaaa actactcaat ggtaaagtct atatggtaca aaatccaaaa
    21961 ctaccttttg cagctcttca tggagatcct gacttgcttg cagatatgaa tactcgtttt
    22021 ggccctactg ccctagttat tccaaaactt gaacgctacc atggtttaaa atctgtccct
    22081 gaattctttg aagccttaaa acttgacaaa accgtcttaa aggttacttt tagtatgttt
    22141 aaagatccaa cgattagaaa ttatatactt tataactatc tttttgaatt accttttatt
    22201 gataaaggtt tatttgtaaa agatgccaaa aaaatagtcc ctagcttaaa aacaagtgat
    22261 atttattatg caaaaggctt tgggggagtg cgtcctcaag tcattgataa aactagagga
    22321 gaattaatgc taggtgaagc aagcattacc gaaactcccg gaattatttt taatatgact
    22381 ccaagtcctg gagcaacaag ctgtttaggc aatgctgaaa gagatgctaa gcttatgtgc
    22441 gagtatttag gagctaaatt tgatgaggat aaatttgctt cagaattatt gtagtctttt
    22501 tgtttccaaa gtttgattat aattaaacaa aaaaaggaga acagcgtgct aaaaaaaact
    22561 aaaattgtag ctacagttgg gccagcaagc gaaaaggaag atgttttacg ccagatgata
    22621 atcaatggcg taaatgtttt tcgtttaaat ttctctcatg gaacacatga ataccacaaa
    22681 aacaatcttg aaaccatacg caaagtttca agagaactta acactcgcgt aggaatttta
    22741 caagatataa gcgggccaaa aattcgcaca ggagagctga aaactccttt tgagcttaaa
    22801 aaaggtgata gacttgattt ttattatgaa aaaatcatag gcgaacaaat tgctccaaat
    22861 cattataaac ttagcatcaa tcaaagcgaa attttaaata tgctaaaatt agacgaatat
    22921 gtctatttat atgatggttc aatcagggca aaagtgactg ctaaagatag tgaaaaaatt
    22981 gaaactctca tagaaaatga tggtttttta aattcaaaca agggtattaa ttttccaaat
    23041 actaaaatca atattgatgt tatcacacaa aaagataaaa aagacttact ttggggtata
    23101 gaaaatgaag tagatttcct agctatttct tttgttcaaa atgctcatga tattgatgaa
    23161 gttcgtgaaa ttttagctca aaataatgct aaaatttcta tatttgcaaa aatagaaaaa
    23221 tttgacgcag ttgaaaatat agatgaaatt atagcatcta gtgatggtat aatggtcgcg
    23281 cgtggagatc ttggtataga agttccttac tataaagtac ctaatataca aaaagcaatt
    23341 attcacaaag ccaataatgc ttcaaaacct gttataacag ctacacaaat gcttttttct
    23401 cttgcaaaaa gcaaaactgc tacaagagcc gaaatttcag atgttgctaa tgctgtttta
    23461 gatgggacag atgctgtaat gcttagcgaa gaaagtgcgg taggtataga tccagccaat
    23521 gcagttgatg tcatgtgtca aaccatcata gaaactgaaa agcgctatcc ttataacaaa
    23581 tttaatgaat ttgaaaatct tgacaataca gataaaatca tgcgctcttc agcccatctt
    23641 gcaacagatc ttaatgctga tgctattttt tccttgacta gtagtggaaa atccgctatt
    23701 aaaatttcaa gatatcgtcc agatatggag attatagcag tggctcattc tgaaaaaaca
    23761 ttgaattctt taagtatagt ttggggtgtc aatcctgcca ttttggttaa taaaagcgag
    23821 gatttaacgg atttacttag agattctgta aaatctagcg ttgaaaaagg ttttatgaat
    23881 aaagagaagt gctatttgct cactgcaggc tttccaactg gagtagaagg cacaagcaat
    23941 cttatacgca tacttgcaaa agagcaaatt gcttactatc ttaaatagac ttaaattttt
    24001 aagtctattt aaatccactt ctaaaattta attaaaaata gtcgatatac aattagcctc
    24061 attataaaaa ggagcagaaa tgcaaatcaa tactttttca aatgtcgcta gtatggcaca
    24121 agctcaagtt agcaataaga aggcagatgg taacgctaca gagaatacaa aagacacaaa
    24181 tgttcaaagt gccaattcaa atcaagatat cctagacaaa ctcaatgcac ttggcggtaa
    24241 gggtattagt caaatttatc ttgtgcaatt tcagcaacaa accatgagta ctgttttaaa
    24301 cacaagcaat gctcaagctg gaattaatga tcttttggga ggcaatgatt taaattctgt
    24361 aaagtctatg ctttcagata ttgactttgc gtctttaggt tataatggaa aaaatccact
    24421 tacaatgaat actgatgaac tcaatcagct catcagtgaa gagggatttt ttggtattga
    24481 caatacagca aatcgcattg ctgattttgt catcaaaggt gctggaaacg atgttgaaaa
    24541 gcttaaaaag ggactagaag gtataaaaca agggtttgag caagcagaaa aaatttgggg
    24601 cggagagctt cctcaaatca gccaagatac aatcgaagct acaataaaaa aagttagcga
    24661 tcgtatcgat gaacttggtg gaaaaacttt agaccttaaa gcatgacaaa ggtgtttgga
    24721 ctataccaag caccttattg gtttttaata tcaaaagtaa aaaattcact cttaaaatca
    24781 ttaggcaaag ttctatactg cgtcattgcc gcttcgtaat tacctacttc ttgataaagc
    24841 aaacctaaag ctaccttact ttctttatta ttcttatctg tgagttttga aagttgcaaa
    24901 agagcaatag ctgagtttgg attattcgca cccacagcag ctacagaagc taaaaacaaa
    24961 gtcctagaat cctttgctcc atattcatcg attagagtat tatacaaagc ataagattcc
    25021 tcatactgct gcgcaaaaat atccaaataa gctaaagttt gtatcatacc ctcatcttta
    25081 accttagagg tattaatcaa ggttttaaat ttttgtcttt ctaaatttaa caatcctgca
    25141 atatgcatta aattaacata caattcccta gcaatatttg aacctccaaa aacactgcgg
    25201 taatcaactt gtaaattctt aaaatgaatt tgggcatttt gagcatattc tttaatattc
    25261 aaattcgaat ttaaagaatt aaaatacaaa atatttgcca caatatcttg cggaagttct
    25321 gatcttaatt tggcaattct tacatctact tgattgttaa gattattatt ttttgcaata
    25381 atagtttcaa aaataagatt taagggtgtt ttttgtccat tctcatccaa ataaggcaac
    25441 atagaaatat aatcaccatt agctaaaaat agcatatttt tttgcatatt ggctttaaaa
    25501 tttgaatctg ctgcaatatt atcaagaatt tcatgataaa gtttggttgt atcattatta
    25561 cttaattttc cgcaaaacat cgcaaaagca ccggctaaat aatttttagg atttaaatga
    25621 taagagctag aaaaatgctt ataagcaagt tcataatttt gcatttgtgc ataagttaaa
    25681 gcaagattgt attgtaaaat actatgttca ggataatctt ccaataaagc ttggaattct
    25741 ttatttgcaa gtcttaattt ttgatttaat gcatcattga taatgttaga aatttttaca
    25801 ttagttgaag ataaggcttg actcctagcc aaatagcttt gaccatctga actatcatct
    25861 acaaaatttg taatattggc tttttttata taaagtgatg cttgttttga gtcaaaaact
    25921 tgataaggcg caaaataaaa aagtaaatca aactgatctt tttgtttttt taggatgtca
    25981 ttggaaaaat ttctctgcgc tatggctata ttgaagagtt ctttatttaa acgaactttg
    26041 atcttatatc tatctaaaat tttatactta tcttcatcat ttctatatgt atcctgcaaa
    26101 cgcaataaca tatcttgaaa atctcctgtt ttaatatcaa ttaaagttaa agctgaaaga
    26161 ctttgattga aatctctttc gatcttcatt gcagtattta aggctatttt agccttatcg
    26221 tattctccca ttcttgcata taaaagtccc aaagaaaggc taggttcaaa acttccttga
    26281 gtatttaatt gttgaacaga ttttgcatca aaatccatct ttgcataaat tttagcggat
    26341 aaatatttag ctacatctgt gtaaggttcc gaatttacgc gttgaagcat ttgcaaagct
    26401 tcgggataat aacccttata ataattaatt aaagccaaat aataatcata caatttagat
    26461 tttccttctt taggaagata aacttgcgct aaatctatat aatatttaaa tttttcctta
    26521 tcattaagct ttaaagcgca aacagcagca ttaatagctg ccacactttg attttctcca
    26581 ttagctattg cctttttaaa actatcaaag gcttcatcaa atttaccctc attcatttga
    26641 gaaaccccta ggttataatt agacaaagat tcattataaa cggcaatttg ctcataaacc
    26701 ttcaaagctt gctccacttc accctttaaa taaagcgcat ttgccttttg tatcatccca
    26761 tcaactcttg tcatatcatt ataattatag gattcatcag gcataaccac aggctgttca
    26821 ataggctttg atgcgataat atcgggctta accttccctt cattaaaagt taaataaaat
    26881 aaagtaaata ccaaaataca aatgattccc aaagacaagc ccacaagaga cataaattta
    26941 cgatctttat accatggagt aggctcatct tctttcacct cttcaaaagt cgatgattcc
    27001 tccggtgcgc tttctcttgt aaatttaaaa ccgccatcac tattttccct aggcaattcc
    27061 tctggtaaag atgcaaattc ttcatcctca ggagcctgac cttcctgccc tttaaattca
    27121 cccaaacttt catcaagtct tggttcattt aaagtatctt cgggtttttc aagaactata
    27181 tcttctttat ctgccattta tactctttaa aaatattttt tcaatacatc aggaatttga
    27241 attctaccct ctttatcttg ataattttcc ataatagcaa ccaaagttct acctactgct
    27301 aaagaagagc catttaaagt atgaactaat tcatttttcc ctttttcatt tttatagcga
    27361 atttttgcac gccttgcttg aaaatcacga caattagaaa cagaactgat ttcgcgatat
    27421 ttattttgcg atggtatcca tacctcaaga tctatagtct ttgccgcgct aaaacctaga
    27481 tctccggtac aaagcatcaa atgtctatga gctaaaccta aagagctgag taaatcactt
    27541 gcacattcta ccatttcatt aaaaatactg tcactttgtt caggtttggt aatgctcaca
    27601 agctctactt tttcaaattg atgctgacgg ataatgcctc ttgtgtcacg ccctgcactt
    27661 cctgcttctt ttctaaaaca agcactatag caagtcattt taataggcaa actttcactc
    27721 gttaaaattt ctccactata aagatttgtc acaggaattt cagaagttga gattaaatac
    27781 aaatcctcat cctctatctt atacatatca tctttaaatt taggaagctg tcctgtgcca
    27841 aacatcgtag gactatttac caaaaaaggc acatttacaa attcaaaccc acgacttcgg
    27901 ttaaaatcta tcatataatt taccaaagca cggcttagca aagctccttc atttttaagc
    27961 acacaaaaac ggctttgtga aatttttacc cctcgcacaa aatcaagcca gtttaaactc
    28021 tctcctaaat catggtgttc ttttggagta aaatcaaatt gagggggtgt taaaactttt
    28081 tttatttcaa cattttcttc ctcatcttca cccacaggaa cgcattcatc agggatattt
    28141 ggaatagcat gagcaatggt ttctaactca ttttccaaag catttacctt tgcattttgc
    28201 tcattgattt taattttatt ttcactgagt tttgccttca aactttcctt atcttctgca
    28261 gtggctagtt ctttactgaa tttattctga aaagcttgaa attcttccaa actcgctttt
    28321 tcttttttca aatttgtaaa aagctcggca agatttttta atatattttc atctactttt
    28381 ttattttgta gctttttagc cacctcatcg aaattatttt gtaaattttt caaatcaagc
    28441 atttttactc cttaaagtcc tattttttca taaatttttt gcattttttc ttgagcaatt
    28501 ttcctagcct tgcttgcacc caattctaaa atttctttta aatgcgaagg tttttctaac
    28561 aactcatcgt atttcattct tgcttctttg aagtattcat tgacaagatc atttaagtac
    28621 attttaaaat gtccataacc ctcaccacct ttttcatagc gagcctgcaa ttctttttgc
    28681 tctacttcat ttaaaaataa ttttgcgatt ttaaaaacat tacaattttg ataatcctta
    28741 ggatcttcta aggctgtact gtctgtgact atggaagaaa tttgcttttt taaagccttt
    28801 tgactagcaa atatatctat ggtattttga taagatttac tcattttggc cccatcagtt
    28861 cctacgacta cagctacctc ttcatttatc ttggcttcgg gcaaggtaaa aatttcaccc
    28921 cattcattat ttacttttaa ggcaatatcg cgagctattt caacatgctg aatttgatcc
    28981 ttacctactg gcacaagttg agtatcgaaa agcaaaatat ctgctgccat taaaacagga
    29041 taagaaaaaa gtccatgtga cgcactcaaa cccttagcca ccttatcttt gtaactatga
    29101 gcgcgctcta ataaacccat aggagtaaat tgagataaaa tccaataaag ctccattact
    29161 tcttttacat cgctttgcaa ccaaaaaaca cttttttgcg gatctatacc aagacttaaa
    29221 aaagccgcag cggctttgag tgaattttgc tctaatttct ttccatcttg acttgaagtc
    29281 atagcatgat aatttgctat aaacataaac atttcacttt tttcttgagc ctccaccatt
    29341 tgccttatag caccaaaata attacctatg tgcaaatctc cacttggctg aagtcctgtt
    29401 aatactctca ttttatcacc ttttttattt ctatcacaag ctcatcaatg cttttatttt
    29461 caacatctaa aatcaaattc gctttttgct cgtatttatt tagacgctca ttatataatc
    29521 tttttgcttg aacttcatca taaaataaag gtcttttagc aatttcattc tcgcttaaac
    29581 gcttttttag atattcaaaa cttgctttta aataaataca aaaacctatt ttatcaaaat
    29641 ccaaaacatg tataaaacct ccgccactag ctatagaagc tccattacaa gagcaaagaa
    29701 aatttgctac tttttgctct tcttgtctaa aaaaagcctc gcccttttct ttaaaaattt
    29761 cactgatttt ttgatcaaat ttcatctcaa tcaaaccatc actatctaaa aaaacaagat
    29821 ctaaatcctt agccaaagct ctagctatag tactttttcc actacccata aaaccaataa
    29881 aaataatatt tttaactttc atcattttcc ttgcttcctt ttttgcgcga agcaatgact
    29941 aaaggaacac cttcaaagtt aaattctttt ctgatttgat tttgtaaata acgcttataa
    30001 ctaaaatgca aagccttagg tctattcata ataagtgcga ttttaggagg tgctaaatca
    30061 tactgcactg cataataaat ttttaccaat tttccataat catgtggtaa aggatgagcc
    30121 ttagtcgcac ttgcgattaa atcattaagt tttgaggttg gaattttttg tgtaaaatta
    30181 gtaaagactt ctaaaatttt ttctaataaa acatgtactc tttttccact caaagcagaa
    30241 acactgacaa cgggcgcata agctaaaaat ttaaagcgat caagttttaa ttcctttacc
    30301 actttatcaa attcaaattc agttttatcc catttattta atacaataat cacgcccaaa
    30361 taatgctttg ctgcaagtcc agctatcctt tcatcaagct cgttaaaacc ttcattggca
    30421 tctaaaacca aaagtgcgat ttgagaatta gataaaatct tttctgtgcg gtttaatgca
    30481 aaacgctcaa gcccttgaat tttacctcgc tttctaatac ctgcagtatc aacaaattct
    30541 atcactttat ccttataaac tatgctttca ttaacaggat caattgtcgt tcccgcaata
    30601 gaactcacca cactgcgctc ttgttttacc aaagcattta aaaggcttga ctttccgaca
    30661 ttaacacgcc ctactatacc cactctgata taattttgat cgagttcttt aaactgaaat
    30721 tcttttccct cttcataatg ttctaaaaaa tcttctaaat tttcttcctc atcagggatt
    30781 aaaaattgtt catctaaaaa gttctcaagc caattataaa gctcatctag ccctatatta
    30841 tgagtaacag aaagattaaa aacctctttt acaccaaaat tagcaaattc ccacgatctt
    30901 tcttcatctt ttttattatc cactttgttg attactagag caataggctt tcctaatttt
    30961 tttaaagaat gaaaaaattg cctatcttca tcatcgggac ttagttttcc atcaaccaaa
    31021 taaaggataa tatcactttg ttttgcaatt tttagagtgt tttttttaac atttttaaaa
    31081 agctcattgc tttcatcaag accaccacta tcaatcaata gggctttttt agaatttata
    31141 aaaacttctg ttttattggt atctcttgta gtacctgaaa tttcacttgt aatagctatt
    31201 ctttgccttg ccattctgtt aaataaactt gattttccaa catttggctt acctataagt
    31261 atgatgcttt gcatttgttt acctaataaa aatttttaat gtatattttt ttaaaaaatt
    31321 atataaaatt tgccttaata ttaagcaaaa aaagactaga attaaccata atttaatcaa
    31381 ggaaaaaaga tgctaaaagt catcaaacat aatttaggaa tttattttat gattttagcg
    31441 tgcttagatt ttgcacttat gggagcttgt gcgaaaattc ttagcaaaga aatgagttcg
    31501 attgaaatta tgttttttag aaatatcatc ggcgtattgt ttatagttta tctactaaaa
    31561 cgctcaaaag ttcacaaaga aggaggacat ttttggcttt tagtctttcg cggggtaaca
    31621 ggaacacttt cgctttatat gtttttttac aatgtttcaa atattaccct agggggtgct
    31681 tttgcttttc aaaaaactgc tccaattttc atcactttaa tagcttttat tatttttaaa
    31741 gaaaatatcg gagccaaggg atggctgggg attttaatcg catttagcgg ggtgctttta
    31801 attgcgcaac cttgggcgga tagttcaact cattcgggtt ttgatttaaa aaattctatc
    31861 ataggtgtta tgagtggatt tttagcagcc ttggctctta caagtgtaag agagcttaga
    31921 aaattttaca ctacagaaca aattgcattt tcttttatcc ttttgggggc tttaatgcct
    31981 ttaatctcta tgataggtgc tgaatttttt gagccaaaac atcttgattc tttgcatttg
    32041 gattttattt tagcaccttt tgtcatgcct agccttacag cttggcttat cattgctgtc
    32101 atgggagcct tgggcactat ttatcaaatt catgtaacca aagcttatgg catagccaaa
    32161 caagcaggtg ttgtagcagg tgtaagctat cttgatgtag tctttagtat ggtagtgggt
    32221 ataattttgg gtgatgattt accaagtgct atggtttttt taggtataat aggcattatt
    32281 tttggtggaa taattttggt taaaaacaaa ggaaaaaaat gaaaaaaatg atactcattg
    32341 ccggtccttg cgtcattgaa aataaggatt tggtttttaa agtagcacag aatttacaag
    32401 aatttaatga aaatgaaaat atagaatttt attttaaatc aagctttgac aaagcaaatc
    32461 gtacaagtat taattctttt agaggccctg gtcttgaaga aggattgaaa gttttacaaa
    32521 gtgtaaaaaa tgaattcggt atgaaaatct taactgacat acacgaaagc acgcaagcag
    32581 cacccgtaag cgaggtggtt gatgttttac aaattcctgc ttttttatgc agacaaactg
    32641 atctgctagt cgcagcagcc aaaacaaagg cgaaagtaaa tattaaaaaa gggcaatttc
    32701 ttaacccaag cgatattaaa tacagtgtca aaaaagtact tcaaacacgc ggtatagaag
    32761 aagaaggcta tgaagtagct gataaaaatg gtatttttgt agctgaaaga ggagctagct
    32821 ttggctatgg aaatttagtc gtggatatga gatctttggt tatcatgcgt gaatttgctc
    32881 ctgttatatt tgacgctact catagtgtgc aaatgccagg agctgcaggg ggaagtagtg
    32941 gaggaaaaag cgaatttgta gagcctttag caagagcagc agcagctgta ggagtagatg
    33001 gctttttctt tgaaacacat actaatcctt gcgaagcttt atgcgatggg cctaatatgc
    33061 ttgatcttaa tcgtcttaaa gcttgtgtaa aaacactttt agaaattcaa aatatcattg
    33121 aaggaaaata atatgactat cattgaagga aaattaaatt tagactcaaa tacaaaaatt
    33181 gctatcatca atgcaagatt taatcacatc atcaccgatc gccttgtaga aggtgcaaga
    33241 gatgcttttt taagacatgg tggcaaagaa gaaaatctta gccttatact tgttccaggc
    33301 gcttttgaac ttccttttgc tttaaaaaaa gctatagaaa gtaaaaaatt tgatgcgatt
    33361 tgttgtgtgg gtgcggtcat tcgtggctca actccgcatt ttgattatgt ttcggcagaa
    33421 accactaagg gcattgccaa tgtaagttta aaccacaata tccctgtaag ctttggagtt
    33481 ttaacaactg atactataga acaagccata gaaagagcag gaagcaaagc aggaaataaa
    33541 ggctttgaag caatgacaac tgttattgaa atgctaaatt taagcaagga attttaatgg
    33601 caacgcgtca ccaagtaaga caaagtgtga tttctttgct ttatgcccta gaaatgaatg
    33661 aaaaaaatga aaattttatt gatgaatttc tcaatgaaaa aaaaatccgc aacgagcaaa
    33721 aaaatttcac actgagttta tacgaaggaa ttataaaaaa tcttgatgat atagataaga
    33781 atttaaaccc ctaccttaac gaaaatgaaa ttgaaaaatt aggacatatc gaaagagcca
    33841 tactgcgact tggtgcctat gaattgcttt ttacagacac gcctaatgcc atagtgatta
    33901 atgaagctat agaacttgct aaagaacttg ctaatgataa ttctccaaaa tttatcaatg
    33961 gggttttaga tactcttgtt aaggcaaaac aatgaaactc tgcgtagctc ttgatcttgc
    34021 caccaaagaa gagtgcttaa ggcttgctaa agaattaaaa ggtttagatc tttggctaaa
    34081 agtgggttta agagcctatt taagagatgg ctttaaattc atagaagaac ttaaaaaaat
    34141 cgatgaatat aaaatttttc tcgatcttaa aattcatgat attcctaata ccatggcaga
    34201 tgcttgcgag gaaatttcaa aacttggcgt tgatatgatt aatatccatg caagtgctgg
    34261 aaaagtcgct atgcaagaag tgatgtctag actcaatcgc ttcaataaaa gacccttggt
    34321 gttagcagtt tcagcactta ctagctttga tgaagaaaat ttttacagca tttataagca
    34381 aaacatcgat gaagctgtga ttcatttttc aaaaatgtct tatcaaaatg gacttgatgg
    34441 tatggtatgt tcggtttttg aaagtaaaaa aattaaagaa catacaaatt caaatttctt
    34501 aaccctcact cctggaattc gtccttttgg ggaagcaagt gatgatcaaa aacgcgttgc
    34561 taatcttaca atggctagag aaaatttaag tgattatatc gttgtgggaa gacctatata
    34621 taaaaatgaa aatcctagag ctgtatgtga aaaaatttta gacaaaatac acagaaaaaa
    34681 tataagcgaa aatgatatag agcaaaatta tgaagcaatg cagcaaaaag aatgggatat
    34741 gtgcaatcat tttgaagaat ggatcaaaac tcagcctgat aaagaacaag ctttgaaaga
    34801 attttatact aagtgcggga taaaatattg aattatcagc aattagaatg tgattatttt
    34861 aatctttata atcaatttat tagcgtagat tttcaaattt cattatttga aaaaaatcat
    34921 aaaagcttga ttaaagattt tatatttttt tatcatcaaa ttttaaaaca aaaagactta
    34981 aattttttac tcggagtgag aaacaaaatt gctcttaaag ttcataatta tatgcaagaa
    35041 tactccactt ctccaaaaga tttgagtctt atttgcttaa gagaacacaa acatattgaa
    35101 ttttttcaga gattttataa agccttggct tattttgtag cctttagaaa aaaacttgat
    35161 gaagagcaaa aaattaaaaa tttgatttca aatatcaatg actgttttgg ctgtcatttt
    35221 atcaattctg actttaacaa tttacaaaat tttcaaaaaa atgatttctt tacactgcct
    35281 gaaaaatgtc ttcaatattt tcatcttgct atgattcatc tttgttttat ggttttaaat
    35341 cctttaaatt ttaaggattc taatcgacac cttgataaag caattaacta tcttatcgat
    35401 ggagcttttg aaatttatga gctcatcttt aaagaatatt ttctattatt tccaaaggat
    35461 gaagagctta aagatgaact taaaaaaata aaaaatttag aatttaaaat tctaatgcaa
    35521 gaagtttcaa gagttaaact actcaatcat tata
//
LOCUS       DAQUWA010000009        32900 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.009, whole genome shotgun sequence.
ACCESSION   DAQUWA010000009 DAQUWA010000000
VERSION     DAQUWA010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32900
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.009"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            101..712
                     /gene="plsY"
                     /locus_tag="R8X70_000372"
     CDS             101..712
                     /gene="plsY"
                     /locus_tag="R8X70_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEF2928184.1"
                     /translation="MENLIIYAIAYLLGSIPFGLILAKQFAQINIQNQGSKSIGATNV
                     LRVVKEKDPALAKKLAIATIVLDFAKATIPLLVLKFLNYDLNLLWTVAVLTVFGHCFS
                     IYLLFEGGKGVATGAGAMIVLLPLELITAFIVWFIVGKIFKISSLASLLALLVFIGSS
                     FIFNYDMQTIKTHAPVFIIAFIIIYKHLPNIKRLVFKEECKVI"
     gene            697..1014
                     /locus_tag="R8X70_000373"
     CDS             697..1014
                     /locus_tag="R8X70_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEF2928185.1"
                     /translation="MQSHINIKMQFKCIIGILKFERKKKQKVCIYLTAKANDFLDYAK
                     VSKKIKKYYKKEQFLTLEESLEFVCAKLHRKFPQIYYIKIKTYKPEIIKNARVGVKLK
                     KFY"
     gene            1093..1764
                     /gene="hsrA"
                     /locus_tag="R8X70_000374"
     CDS             1093..1764
                     /gene="hsrA"
                     /locus_tag="R8X70_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HEF2928186.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLASWNLPDGDGAELVNTIKHKSPRTSVMIMSAKADKDTEIKALKAGADDFVKKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKGQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
     gene            1879..2124
                     /locus_tag="R8X70_000375"
     CDS             1879..2124
                     /locus_tag="R8X70_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEF2928187.1"
                     /translation="MALLITKDCVCCDACREECPDEAIYEHSPIYVIDADLCSECVND
                     FSEPACIVACPYECIIPDPDNVESIEELKLKNRNREF"
     gene            2124..3584
                     /locus_tag="R8X70_000376"
     CDS             2124..3584
                     /locus_tag="R8X70_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEF2928188.1"
                     /translation="MAKKTAVVDLGSNSIRMVVFEKTSRYSFYTTCEYKRKVRLGENA
                     YNNGKILQEDSMQRAENALAFFKQCALKHKCKKIFIIGTSALRDAPNSKDFIKRIKDK
                     LNLNIRCIDGKNESYLGGLATLNLLSPFKDGTTLDIGGGSSELCLIKNNKIISCISLD
                     LGTVRLKELFYDKGKADALDDFIKPILEQIPSEFCNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNIHDFRYMLEDEKEHILKIFNSKADALINFGIKKDRFDTIKEGIFIFLKIAEKL
                     KAKQIITSGVGIREGVYLQDLLRPKHTFPVNFNPSLKSLQDRFLQGNINNKTPYFSIQ
                     IFKVLQGLHKIHEKYQQSLLNAAKLCHLGEYLNFYFANEHSAYFILNGLNYGFSHQEK
                     VLIATLIKLNGKKVNPYNLEPYRQLLPNTHIISWLNFILSLAKILSTNENKIEIAFVN
                     NTLYIYSESKILDLPKDELKKITKPATIALAINQKP"
     gene            complement(3581..4372)
                     /locus_tag="R8X70_000377"
     CDS             complement(3581..4372)
                     /locus_tag="R8X70_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928189.1"
                     /translation="MKVLLLSILALPLFAVELISYNIYDRNDRVDLMLSFDSAYGGKI
                     SQKKEKNLTLLTLSDLKYSKEELKSLNSGLVDKISISSKDNNTYIMLQNKEPISLELS
                     SINDKFGVRIRAVQQGKESINPEQSNLSTNEEPILNSKKTSLEGYDYTNYILVMLVLF
                     VLLIVLWWLKRTLAFKNTGVSRDFRMVFQRFLDKNNQLIVFEYASKRYTMIVGNSNIV
                     LEEIEIPDYEPKVTEKSEKNFDSFFEENKKRIQSLIEQRQKNKKS"
     gene            complement(4372..4680)
                     /gene="fliN"
                     /locus_tag="R8X70_000378"
     CDS             complement(4372..4680)
                     /gene="fliN"
                     /locus_tag="R8X70_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEF2928190.1"
                     /translation="MGSDIDFGDRHGLLQSYEDILDITVDFVSELGTTNMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(4680..5102)
                     /locus_tag="R8X70_000379"
     CDS             complement(4680..5102)
                     /locus_tag="R8X70_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928191.1"
                     /translation="MLKVLEYSITHFFEHILRLHIEKAEDIVGELYGASIPVMEKSGR
                     EYHFYLFFPKEFLQTIANVLVRDEKFKEDDWCDLSKECANQIIGYAKNLLNDAKGDDE
                     YKLGIPEYLGRVDFSSIILDESLTYSFENHYFRIGYCK"
     gene            complement(5172..5921)
                     /locus_tag="R8X70_000380"
     CDS             complement(5172..5921)
                     /locus_tag="R8X70_000380"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEF2928192.1"
                     /translation="MVDFTKFYKDKANVAYMVLGYPNLKISEEFLKRLDESSIDVLEL
                     GIAYSDPIADGEIIANAAKIALEQSADIHKIFELLAKIKTKKALVFMVYYNLIFSYGL
                     ENFVKKAKALGISALIVPELSYEESKPLYKECQKYDIALITLVSITTPKERVKELVKN
                     AKGFIYLLASVGITGGQSADNKLLQEKIQEIRSFTQLPIYVGFGVKNNTDVRNMRKLA
                     DGVIVGTNIVKLFASNDVNQILKGVEEIFEK"
     gene            complement(5914..7092)
                     /gene="trpB"
                     /locus_tag="R8X70_000381"
     CDS             complement(5914..7092)
                     /gene="trpB"
                     /locus_tag="R8X70_000381"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEF2928193.1"
                     /translation="MKKAYYGEFGGQFLPESAMFALNELEDAFLKFAQDKAFKKELQG
                     LLATYVGRPTPLYFARNLSKKYGHEIYLKREDLNHTGAHKINNAIAQALLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKVNAIQSGL
                     KTLKEATTAAIQAWVGDIKNLFYVVGSAVGPYPYPKMVTHFQSVIGKECKSQLKKLGK
                     KVDYIIAAVGGGSNAGGIFYEFIKDESVNLIGIEAGGLGVDTLYHAATLTKGKTGIIH
                     GMKTKVLQDELGNILPVHSVSAGLDYPGIGPLHAFLSQSGRAKYYAITDEECMMALKM
                     LCKEEGIIPAIESSHALAFLEKLCPKLNKKSVIVVNLSGRGDKDMQTIREYKKGTIYG
                     "
     gene            complement(7089..7688)
                     /locus_tag="R8X70_000382"
     CDS             complement(7089..7688)
                     /locus_tag="R8X70_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEF2928194.1"
                     /translation="MTKLKICGIKDENNAKEIAELNVDFMGLIFAKSPRQLSLEQAMN
                     LSDIIHAGFKKSVGVFVDENLEFILKAIKQAKLDGVQIHRKISEFEFKTLKESGVFVW
                     QVLSVGDRLELEENIYADLILFDTKGKFHGGNGESFNWDLLKDFKKDFALAGGIGTHN
                     INEALSLKPKIIDLNSKIEKENHLKDVEKIKYILKEMRK"
     gene            complement(7675..9267)
                     /gene="trpD"
                     /locus_tag="R8X70_000383"
     CDS             complement(7675..9267)
                     /gene="trpD"
                     /locus_tag="R8X70_000383"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEF2928195.1"
                     /translation="MILLIDNYDSFVFNIKSMLENVYKGEILVVRNDKITLDEIKALN
                     PNYIILSPGPKHPKDSGVCLEIFKSRLNIPTLGICLGHQALGFSFKAEIAKLQNPMHA
                     KNSLIKIYNKDTIFKDFEDEVSVMRYHSLEVKNLPDDFEILALSDDNVIMAIKHKTLP
                     YFGVQFHPESYFSEYGIKIFANFLNQEKAVQDKKHTLGFYLQKMSENHYLESEDFSEI
                     CKIIMSRDYEPLQAAALLVLISEKSLNQKSLSSLVREILRYSKTFSDESDMIDICGTG
                     GDNFKSINVSTASAFILAALGVKVAKHGNRAISSSSGSTDVLDALDVKIPDNLECALN
                     DLQNKNLAFFHAPYFHPLVGELRELRAKLGIRTVFNVLGPLLHPNLKLKYQMMGNYHA
                     PVHKLLAEVLRSLGRKRALVVRGNDGMDEISICDETKIFEVREGEIYEYGVTPEQFGF
                     KRAFHSEIMGGNAYENAKDLKDILSGKIQGAKFDIVVLNSMFALYTANKVSTPLKAKD
                     IILEAIYSGKVMEYFRSLNDKA"
     gene            complement(9269..10510)
                     /locus_tag="R8X70_000384"
     CDS             complement(9269..10510)
                     /locus_tag="R8X70_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HEF2928196.1"
                     /translation="MLEMKANLYYRQILKEFPSSYFAEDSTRVIIGIDCDFYDAKDIT
                     LSELKAKFYENASREQICKYSGFFGVFSANFISLFENLPSNENKNYDFPNFLFANAKA
                     YLVYEKTSKMFFKYGENKYFDFLKEDFVFDKKVCEYKILQDFQEEKRDFIQSVEKAKE
                     YLLSGDIFQVVLSKQLCIEHNFDSFEFYETLSELNPSAYMFYFPTQYGVVLGSSPEFL
                     LKIKNKEIFLAPIAGTRNLDENSDILKLEKDLLSDEKELSEHKMLVDLARNDASKFGT
                     NTRVENLFSITRNKFVMHIVSEVYATMDKQANIFDIIGAVFPAGTLSGAPKIRALEII
                     NELENLDRGVYGGAVGFLNFNEDVVLAIIIRSAFFKENKAFIASGAGIVLQSDPQKEY
                     EEICAKRKALLVSFEKMAKRS"
     gene            10894..11679
                     /locus_tag="R8X70_000385"
     CDS             10894..11679
                     /locus_tag="R8X70_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEF2928197.1"
                     /translation="MNFTDLPYIFIGIFSGITSGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAIFGSYINYKKKNLNLKDGIVIGLGGLLGASFSGILLQALSDVALTA
                     IFLGVSCVFFIKYAFGIKESVVKSHKSVWVKNGILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASISGIISFANSGVIDAEVIHKGVLVGFASMIGV
                     FIGIKIIEKMHISAHRKILLCVYALSILATTLSLLRKLGILAF"
     gene            11767..14589
                     /gene="uvrA"
                     /locus_tag="R8X70_000386"
     CDS             11767..14589
                     /gene="uvrA"
                     /locus_tag="R8X70_000386"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEF2928198.1"
                     /translation="MNDTIKIIGAKENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHQCGQKISSMSASDIVGEILKFPKGAKIIIYAPLVREKK
                     GTYADLLENLRNKGYVRAQIDGVLVRLDEDIELSKTKKHTIKLVIDRLEIQEDLLSRL
                     ASDIEKGLEESFGEIEIEVLNPDEVGLNKHYHFSEHSACFACKISFVPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDESLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     PIKLPFAELSEEQKRLVLYGNAKTIDFFWKRNRLKRTFEGVVKMAYEMLKDEKDLAEY
                     MSEKICKDCAGHRLKPESLAVKIASKGLGEILDMSIEDSTSFFANKKNFSYLSEQERL
                     ISEPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFAGTYKELLKSKSETALYMNGKKQISQLQNREQKEWLELKNVNINNIKDLSVSFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCHGKRYNDATLEIKYKGKNISEILNMSVLEASEFFAAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKIISTGSVE
                     KVAKDHKKTKSYTGYYLDLELKNAKS"
     gene            14591..15124
                     /locus_tag="R8X70_000387"
     CDS             14591..15124
                     /locus_tag="R8X70_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928199.1"
                     /translation="MTQEQKISFFKIKRLSIYIFFCALYNFFYFFSYENVGSLHCEFL
                     CISGRFLCFFSWIYIVLAFIFMVARIYFLFSSKKILIYFLLAIISLGSSFFLLENKIL
                     FLGLLALFFVFYFLFSLTLASLFKEVKMSFYFVFLCMLLAFLFFEKLSFLFFFLALHF
                     LTFAYAFDRYETLKKLY"
     gene            15146..15823
                     /locus_tag="R8X70_000388"
     CDS             15146..15823
                     /locus_tag="R8X70_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928200.1"
                     /translation="MSNLNFHQMFEIQRQNDFKSIKKLAWVVFISFLLCVCFQFLPII
                     LDFAYDLKLLKFNSNTNILAMVFNAIFLISYLIMILKLYFVSQSKVLLISFFIAAFTQ
                     FIALLSLNYLIASPVVDKILRIFLYGFSFLCLAIAIFCTFIFFKTLKTLCENKIYFKL
                     CFIFKSAILIIIYILMFVLIYSEHSLALIIAYFMIFFFAGLLFTIYYALFAFALSKNQ
                     NIKLSQT"
     gene            15836..16426
                     /locus_tag="R8X70_000389"
     CDS             15836..16426
                     /locus_tag="R8X70_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928201.1"
                     /translation="MKKKIFKFSILFTIFISLSQSTLVFIFNHYLIIDYSAYETLPQS
                     FAMLNLADQKLYHLTQNLRFLHSILAFLLIISFFFVHLFFFYISRKEKFIPYSFFCFV
                     LMVISAIANLLEGIEQKESIFWYYKAFLDVGVCLIYLLFLDKFFQSHLFKIFFVCACL
                     CTILTKFKFMDFTTPFVLPIYLFILLILMRKKSFNV"
     gene            16419..16862
                     /locus_tag="R8X70_000390"
     CDS             16419..16862
                     /locus_tag="R8X70_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEF2928202.1"
                     /translation="MFDFLYNDISYLGLFIVCFLSSTLLPLASEAFVVAFIKLDFNAH
                     LVLFIATLGNTLGSLSTYALAYLGKEKILEKYFSKSLKKLDKFNANFTKFGSLYAFLT
                     FLPLIGDIFALGLGFAKYPFIKACFFISLGKLSRYIFIIFIANSL"
     gene            16926..19565
                     /gene="polA"
                     /locus_tag="R8X70_000391"
     CDS             16926..19565
                     /gene="polA"
                     /locus_tag="R8X70_000391"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEF2928203.1"
                     /translation="MKTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSL
                     KNEYKSDYIIFALDSKGKTFRSDIDPNYKKNRTPPPPELLEQIPICIEMIEKMGFMSA
                     SYEGYEADDIIASVVKTCKDKDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEEA
                     CFEKYGVKPYQIKDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVR
                     NERSRKLLLEGKENAFLSKKLASLYEDLEVSNLLEKADFPQDEPLLKILEILEHYELN
                     VLLKKLRQNPDNKDKNLGFKATLIQDEDKLFEILNSLEQESIIAFDTETTSIDTKEAK
                     IVGFSFCMSENEAFYVPLTHNYLGVGKQVSLQSAKKAIELIFKHFIIGHNLKYDFKII
                     ENNFKLSLPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASV
                     ELEKACKYAAEDAYITLRFYLYFLKNLEPHLLDLAKNYEFDFIKIIMMMEENGIKLDT
                     HALEILMKKFESEIKILSEEIYALCEDRFNLNSPKQVGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNELLDKHPVISKILDYRELAKLYSTYCEPLLKLALKDENSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKDYKSCFIAKEGFSFISLDYSQIELRMLAHFSEDEKL
                     LNAFKNDEDIHARTAIMIFGESNYETRSIAKSINFGLIYGMGYKTLSKNLKIEANLAK
                     TYIEKYFENFTSIKSYFEKVKNEAKANGFISTLSGRKRYFDFENAKPMQVAMYERESI
                     NSILQGSAADIIKFAMLEIAKILNQDKRLILQIHDELIFEVKDELCENFVKKTSDIME
                     NIVKLKVKLKTSSSIAKKWGDLK"
     gene            19581..20357
                     /gene="motA"
                     /locus_tag="R8X70_000392"
     CDS             19581..20357
                     /gene="motA"
                     /locus_tag="R8X70_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HEF2928204.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAA
                     FCAMTSTHKKIVKAAYKELKIVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTNE
                     IENEFLRNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIIFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPRISQFDKG"
     gene            20360..21091
                     /gene="motB"
                     /locus_tag="R8X70_000393"
     CDS             20360..21091
                     /gene="motB"
                     /locus_tag="R8X70_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEF2928205.1"
                     /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTATQTVQQETQDTYKYKGSQEEKEDELSKLKQMAVNQQEVIKKL
                     QAALDQSENQEILNLPSKVEFERGSAQIVSADIQDYLKRIAQLISYLPPQIEIEIRGY
                     TDNSDSALRSYDLGYTRAENVLKYLIEGGVSTKNINLKSYGLNSPINGNPQALENNRV
                     QIYFKVDIKDNDAKQSVLDLIEKSK"
     gene            complement(21106..22194)
                     /gene="flhB"
                     /locus_tag="R8X70_000394"
     CDS             complement(21106..22194)
                     /gene="flhB"
                     /locus_tag="R8X70_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HEF2928206.1"
                     /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIVGFVI
                     TLFMMGFIGERITNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLILLAPIVLSIMIAG
                     ILGNVMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKLVESVKIVLKVGVVFTVAFI
                     VLLKFMQELPLVERYNIIGQLIWLRDRAIILAAIVIIAFLVIAVLDIFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTTKEQAPRVVAKGVDFLALRIKQVAYDNNVVVYENPPLARELYKACDINDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKNN"
     gene            complement(22316..22912)
                     /locus_tag="R8X70_000395"
     CDS             complement(22316..22912)
                     /locus_tag="R8X70_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEF2928207.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVEDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMIRMVDTML
                     FTNEHGEVCPAGWNKGDAGMKANPKGVAEYLDKNEDKL"
     gene            23168..23452
                     /locus_tag="R8X70_000396"
     CDS             23168..23452
                     /locus_tag="R8X70_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HEF2928208.1"
                     /translation="MAVKITDSCIACGSCIDECPVSAIVDDANNPEGEDRYYVYADKC
                     VECVGHNDQPACASACPTDGCIVWSEIASGQPSRDNIGSDMRDGTTPVFA"
     gene            23553..23966
                     /gene="ndk"
                     /locus_tag="R8X70_000397"
     CDS             23553..23966
                     /gene="ndk"
                     /locus_tag="R8X70_000397"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEF2928209.1"
                     /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQ
                     AEAFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAQPGTIR
                     ADFAESIDANAVHGSDSLENAKIEIEFFFKSNEIC"
     gene            23966..24325
                     /locus_tag="R8X70_000398"
     CDS             23966..24325
                     /locus_tag="R8X70_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928210.1"
                     /translation="MKIAFSRINNTNYPFKLNLENVVFEGNLVKVNPKLVKINATMQG
                     FVYRPCDSCGEELELEIKENLDLFASDGIFKDNTNELSNTIEFFDGHIDLIEVAVSEL
                     EAYLSDYFYCNNCKNKS"
     gene            24349..24495
                     /gene="rpmF"
                     /locus_tag="R8X70_000399"
     CDS             24349..24495
                     /gene="rpmF"
                     /locus_tag="R8X70_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEF2928211.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPN
                     TKEY"
     gene            24501..25487
                     /gene="plsX"
                     /locus_tag="R8X70_000400"
     CDS             24501..25487
                     /gene="plsX"
                     /locus_tag="R8X70_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEF2928212.1"
                     /translation="MIDIAIDAMGGDFGEKPIIEGVIEALKERPFNAILVGNPNILRP
                     LIPKNLEQYIQYENANEVFSMNENATDALKRKETTIYKTIELVKNGKAKAAVSAGHSG
                     ASMSLATLRLGRLKGVLRPAIATLMPNTTSKTLFLDVGANTDCKAENLFQFAIMGDAY
                     AKEIMKISKPRLALLSNGEEECKGNELTKEAHQLMKQIPSFVGNAEGRDIFNGEVDVL
                     VCDGFDGNVILKACEGVATAIIHILKNEIKQSLISKIGALLMKPSFKRLKKHIDWQEY
                     GGAPLLGVNGCVIISHGKSDARAIKNAIFQAINFSESNINQIIEKELEKYNA"
     gene            25480..26457
                     /locus_tag="R8X70_000401"
     CDS             25480..26457
                     /locus_tag="R8X70_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEF2928213.1"
                     /translation="MPKASLKSIASYIPEQILSNHDLEKIIDTTDEWITRRTGIKERR
                     IASKDESTSDLGTKAAIKAIERANLKPQDIDAILVATLSPDYFTMPSTACKIAANLGL
                     NGISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKASSIMDYTDRSICILFG
                     DGAGAGVVSLDENNPIIDVHTASNGNYGDLLMTERSQESKEASSLAMKMKGNEVFKIA
                     VQTLSNDVVEILSKNQILPEQIDLFIPHQANLRIIKAVQERLNLSDEKCVVTVHKYGN
                     TSAASIPMAMNDAYEEGRLKKGNLILLDAFGGGFTWGSALLKFGGENFS"
     gene            complement(26685..27761)
                     /gene="serC"
                     /locus_tag="R8X70_000402"
     CDS             complement(26685..27761)
                     /gene="serC"
                     /locus_tag="R8X70_000402"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEF2928214.1"
                     /translation="MRKINFSAGPSTLPLELLEYAKNELCDYQGKGYSIMEISHRSKV
                     FEEVHFGAMQKAKELYGLNDDYEVLFLQGGASLQFAMIPMNLSLGGVCEYANTGVWTQ
                     KAIKEAQILGVNVKVVASSEESKFDHIPQVEFSDNADYAYICSNNTIYGTQFKNYPKT
                     KAPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGISCLFIRKDMLERSQNKNLPS
                     MLKYSIHAQNQSLFNTPPTFAIYMFNLEMKWLLDQGGLDAIDAKNSQKAAMLYECIDS
                     SEGFYKGHADKKDRSLMNVSFNIAKNSELEPIFVKEAEEVGMLGLKGHRILGGIRASI
                     YNAVTLDQVKTLCEFMKEFAKKYN"
     gene            complement(27771..28934)
                     /locus_tag="R8X70_000403"
     CDS             complement(27771..28934)
                     /locus_tag="R8X70_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEF2928215.1"
                     /translation="MKVSELNLKAKALLETHLNDIVLSGELSKITMHGSGHWYFDLKD
                     EKSSIACAMFKGANLKVDFQPKVGDFLELVGSVSLYAESGRYQFIASSMKKAGMGDLE
                     AQFLALKERLQKEGLFNSEYKKTLPQFPKKIGIITSKTSAALQDMLKLINQKEYFLAK
                     IYVFNALTQGSGAAYSLIQALKKADEIGLDVIIIARGGGSREDLFCFNDEGLAREIFK
                     AKTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLLYSRLDLEQGLDLLEEKLTKLW
                     ESKLEYCENLLSNLHKFFKAKSLETMIEAKEKQLAFLLKQAKIIIESKIQKAELELQK
                     LQNAFFQHENFFKKSKNLISIKKNGKIANLEELKSEDIITLSSQTLQKEAKIL"
     gene            29107..30072
                     /locus_tag="R8X70_000404"
     CDS             29107..30072
                     /locus_tag="R8X70_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEF2928216.1"
                     /translation="MKLKIFCSVLIFGFSLTFAKEPNRPECIAPAQPGGGFDLTCKLI
                     QVGMLKANIISTPMRVTYMPGGVGVVAYNTMVNNRSKDGNVVVAFSSGTLLNIATGKH
                     GKYNENNVKWLASAGVDYGMIAVKSDSPYKNLEDLINALHKDPNSISIGAGGSIGGQD
                     WMQTALLAKTINIDVKKIRYVAFEGGGDALTSLLGNHIDVISAGIAELVPQIETGTIR
                     VLAIFSPKRLPGTLANIPTAKELGYEVEWPVIRAYYMGAKVSDEAYNWWLDAFDKFQQ
                     TQEYKDQLKQRSLFEFDKKGKELEDFVKKQTDQYRILAKEFDLIK"
     gene            30077..30520
                     /locus_tag="R8X70_000405"
     CDS             30077..30520
                     /locus_tag="R8X70_000405"
                     /inference="COORDINATES: protein motif:HMM:NF018979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEF2928217.1"
                     /translation="MSSIRIVAEILLVISLIGIYIGWNIHSDFNYEPLGPRPFPVGTL
                     ILIALCSIFLVFFSEDTKVKWGDFILWKKLIVLTLAFLIYALFFEFLGFIICTIFLIF
                     TITLLFGATLIKAIVFSISSSIILYYLFNTLLQITLPFGFIFDNF"
     gene            30534..32027
                     /locus_tag="R8X70_000406"
     CDS             30534..32027
                     /locus_tag="R8X70_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEF2928218.1"
                     /translation="MDTWMYLMQGFSIALDPYNILIALIGCFIGTIVGMLPGLGPING
                     VAILLPLAFAMNLPAESAIILLATVYMGCEYGGRISSILLGIPGDAAAIMTTLDGHPL
                     AKKGQAGKALSISALSSFIGSFIAICGIILFAPLIAQWSLKFGPAEYFALIVFGLATL
                     GSMLAQKPIRSFLSALIGLFLTTIGIDGNTGVYRFTFDSPHLYDGISFVVLVMGLFSV
                     SEIFLMLEHTQTSQNIINKTGKILVNIKEFFFCFWTIIRSSIIGFFVGVLPGAGATIA
                     SAITYMSEKKIAGEKGKFGQGDLKGVAAPEAANNASACGSFIPMLTLGLPGSGTTAVM
                     MGALTLYNITPGPTMFTDQVNIVWGLIASLLFANVILLLMNLPLVGIFVKTLNIPMWS
                     LAPIIAIVSIIGVYSINSTDFDIILILIIGILGYFLRKLEFPMAPLILGFVLGEQLET
                     NLRRALSISNGDFSILWSGIIAQSLLIGAVLIILIPLLIKKLRKSKF"
     gene            complement(32024..32731)
                     /gene="ubiE"
                     /locus_tag="R8X70_000407"
     CDS             complement(32024..32731)
                     /gene="ubiE"
                     /locus_tag="R8X70_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEF2928219.1"
                     /translation="MQKQDKIIKMFNEIAPTYDKANRILSFGVDVSWRKFACKRVLKL
                     YQKDNLNIVDVACGTGDMIEIWQESAKKLNKNIAHIKGIDPSEGMLNIAKQKFPNIEF
                     IEAGAQELPLQSESVDIVSISYGIRNVVEREKALREFSRVLKQDGIFVVLEFTKREKG
                     GFVASCRDFYLKNILPSLGGMISKNKSAYEYLPNSIEGFLSKEEFIAELKQVGFEMLE
                     FKSFSFGVSSMFIAKKV"
BASE COUNT        11197 a         5297 c         5027 g        11379 t
ORIGIN      
        1 taaataatat taataattaa ttaatacaaa atatatccta tttttttgat ttatttattt
       61 tttttgcata taatgcttca attatttctt aaggttaata atggaaaatt taatcattta
      121 tgcaattgct tatcttttag gctctattcc ttttggttta attttagcca agcaatttgc
      181 tcaaatcaat atacaaaatc aaggctcaaa aagtataggc gcaaccaatg tattaagggt
      241 tgttaaagaa aaagatccag ctttagctaa aaaacttgca atcgctacta ttgttttaga
      301 ctttgcaaaa gcaactatac ccttactcgt acttaaattt ttaaattatg atttaaattt
      361 actttggact gtcgcagttt taacggtatt tggacattgc ttttccatct atcttttatt
      421 tgaaggcggc aaaggggttg caactggagc gggtgctatg atagtacttt tacctttgga
      481 actcataaca gcatttatag tttggtttat cgtgggtaaa atttttaaaa tttcatcctt
      541 agcgtcttta ttggctttat tagtttttat aggaagttct tttatcttta attatgatat
      601 gcaaactata aaaacgcatg cacctgtatt tattatagct tttataatca tttataaaca
      661 cttacccaat atcaaaagat tggtttttaa agaagaatgc aaagtcatat aaatatcaaa
      721 atgcagttta aatgcattat aggaatatta aaatttgaac gcaagaaaaa acaaaaggtt
      781 tgtatttatc ttacagctaa agcaaatgat tttttagatt atgccaaggt atcaaaaaaa
      841 atcaaaaaat actataaaaa agaacaattt cttaccctag aagaatcttt agaatttgtt
      901 tgtgcgaaat tacatagaaa atttccgcaa atttactata ttaaaatcaa aacttataaa
      961 cctgaaataa tcaaaaatgc aagagttggt gtaaaattaa aaaaatttta ttaaattttg
     1021 tttaaagata tctaaacatt tacttaaact atgttatact tttttaaaaa tttcttaatg
     1081 aaggatataa tgatgaggat tttagttata gaggatgaga ttagccttaa taaaactatt
     1141 atagataatc ttaatgaatt tggttatcaa actgactctt cagaaaattt caaagacggt
     1201 gaatatttta tcggtataag acactacgac ttagtacttg caagctggaa tttgcctgat
     1261 ggcgatggtg cagaacttgt caatacaatt aagcataagt ctccaagaac ttctgtgatg
     1321 atcatgtctg caaaagcaga taaagataca gaaattaaag cactcaaagc tggagcagat
     1381 gattttgtaa aaaaaccttt agattttgat attttattgg ccagaataga agcaagactt
     1441 agacttggtg gtacaaatgt aatcaaaata gaagatttag ttattgaccc tgatgaagag
     1501 aaaataacct ataaaggcca agatatagaa cttaaaggaa agccttttga agttttaact
     1561 catttagcaa gacattcaga tcaaattgta tctaaagaac aacttttaga tgctatttgg
     1621 gaagaacctg aacttgttac gcctaatgta attgaagtag cgatcaatca aatacgccaa
     1681 aaaatggaca aacctttaaa tatctctact atagaaactg ttagacgcag aggatatcgc
     1741 ttctgttttc ctaaaaaatc ctaagcattt tgcacccttt ggtgcaaaat ttttatcttt
     1801 atatttattt tttatatttt atttaagttt tgttattgta taaactaaaa attattttta
     1861 aaattttgaa aggtgataat ggctcttttg attactaaag attgcgtatg ttgtgatgct
     1921 tgtagagaag agtgtccgga tgaggctatt tatgaacata gtcctatcta tgtgattgat
     1981 gctgatcttt gttcagagtg tgttaatgat ttttcagaac ctgcttgtat agtggcatgt
     2041 ccttatgaat gtatcatacc tgatcctgat aatgttgaaa gcatagaaga gttaaaatta
     2101 aaaaatcgta atagagaatt ttaatggcaa aaaaaaccgc tgttgtagac ttaggatcaa
     2161 attccattag aatggtggtt tttgaaaaaa cttcgagata tagtttttat actacttgtg
     2221 aatacaaacg caaagttaga cttggagaaa atgcttataa caatggcaaa attcttcaag
     2281 aagactctat gcaaagggct gaaaatgctc tagctttttt taaacaatgt gcgctcaaac
     2341 acaaatgtaa aaaaatattc attataggta cttcagcttt aagagatgct ccaaattcta
     2401 aagattttat taaaagaatt aaagataagc taaacttaaa tattcgatgt attgatggaa
     2461 aaaacgaaag ttatcttggc ggtcttgcaa ccttaaattt attaagtcct tttaaagatg
     2521 gcaccacact tgacataggt ggaggttcaa gcgaactttg tcttataaaa aacaataaaa
     2581 tcatctcttg tatttcatta gacttaggaa cggttagatt aaaagaattg ttctatgata
     2641 aaggtaaagc agatgcttta gatgatttta tcaaacccat tttagaacaa atcccttctg
     2701 aattttgcaa tcaaaatctc attgcaatag gtggaagttt aagagccatt tcaaattcca
     2761 ttatgcaaaa aaactcttat cccttaaaaa atatacatga ttttagatat atgctcgaag
     2821 atgaaaaaga gcatatcttg aagattttta actctaaagc agatgcattg attaattttg
     2881 gtatcaaaaa agatcgtttt gatactatta aagagggtat ttttatcttt ctaaaaatag
     2941 cagaaaaact caaagccaaa caaatcatta ctagcggggt aggcattcgc gagggtgtgt
     3001 acttgcaaga tttgctacgc cctaaacaca cttttcctgt aaattttaac cctagtttaa
     3061 aatctctaca agatagattt cttcaaggaa atataaacaa caaaacacct tatttttcta
     3121 tacaaatttt taaagtctta cagggtcttc ataaaatcca tgaaaaatat caacaaagcc
     3181 tattaaatgc cgcaaaactt tgtcatttgg gtgaatattt gaatttttac tttgctaatg
     3241 aacactctgc atattttatt ttaaatggat taaattatgg cttttcacac caagaaaaag
     3301 tgttgattgc aactcttatt aaattaaatg gcaagaaggt aaatccttat aatcttgagc
     3361 cctatagaca gcttttgcca aacacgcata tcatttcttg gttgaatttt attcttagct
     3421 tagctaaaat actaagcaca aatgaaaata aaatcgaaat tgcttttgtc aacaatacac
     3481 tttatattta tagtgagtca aaaattcttg atctacctaa agatgaactg aaaaaaatca
     3541 ccaaaccagc cacgatagcc ttagctatca atcaaaagcc ttaagatttt ttattctttt
     3601 ggcgttgctc tataagactt tggatacgct ttttattctc ttcaaagaaa gaatcaaaat
     3661 ttttttcaga tttttctgta acctttggct cataatctgg aatttcaatc tcttctaata
     3721 caatattaga attgcccact atcatagtat aacgcttgct tgcgtattca aaaactatca
     3781 attgattatt tttatctaaa aatctttgaa ataccatacg aaaatctcta gaaacacccg
     3841 tatttttaaa agctaaagtt ctcttaagcc accaaagcac tataagcaag acaaataaaa
     3901 ccagcattac taaaatgtaa tttgtataat catagccttc taagcttgtc tttttagaat
     3961 ttaaaatcgg ctcttcattt gtacttaaat tgctttgttc aggatttata ctttctttac
     4021 cttgctgaac cgctcttatc ctaactccaa atttatcatt aatagagctt aattctaagg
     4081 agattggctc tttgttctgt agcatgatat atgtattatt atctttagaa ctgatactga
     4141 tcttatccac aagtcctgaa tttaaacttt tgagttcttc tttgctgtat tttaaatcac
     4201 tcaaggttaa aagagtaaga tttttttctt ttttctgaga aattttaccc ccataagcac
     4261 tatcaaaaga tagcattaaa tctactctat catttctatc gtaaatatta taactgatta
     4321 attctacagc aaaaaggggt agtgcgagta tgcttaataa taaaactttc attaaatttc
     4381 ttttttgaaa tattgaagta cggttttaga atctagaatt tcattaattc taattgctaa
     4441 atttttctca taaaccataa cttcgccctt accaaagatg cgcttattga tatacaattc
     4501 aacactttcc ccagcaggtt tttcaagatc gataaccgaa cctacttcaa gttttaaaag
     4561 ttcagctaca ctcatattgg tagtgccaag ctcactaaca aaatctactg tgatatctaa
     4621 gatatcttca taagactgca aaagtccgtg acgatctcca aaatcaatgt cactgcccat
     4681 tatttacaat atcctattct aaaataatga ttttcaaagc tataagttaa agattcatct
     4741 aatataatag atgaaaaatc aaccctacct aaatactctg gtatgccaag tttatactca
     4801 tcatctccct tagcatcatt gagtaaattt tttgcatagc ctatgatttg attggcgcat
     4861 tctttactta aatcacacca atcatcttct ttaaattttt catcacgaac taaaacatta
     4921 gcaattgttt gtagaaattc ttttggaaaa aataaataaa aatgatattc tctaccactt
     4981 ttttccatta caggaatact ggctccataa agttcaccta ctatatcttc agccttttcg
     5041 atatgaagtc ttaggatatg ttcaaaaaaa tgtgttattg aatattcaag aactttcaac
     5101 ataatatcac ctttataaaa aacttaatta aaaattatag taaatataaa ataaaaatat
     5161 gttttaaaaa attatttttc aaaaatttct tctacacctt ttaaaatttg atttacatca
     5221 ttgcttgcaa aaagctttac tatattcgtt cctactatca ctccatcggc tagtttacgc
     5281 atatttctta catctgtgtt attttttacc ccaaaaccaa cataaatagg cagttgtgtg
     5341 aaagatcgga tttcttgtat tttttcttgc aaaagtttat tatccgcact ttgtcctcct
     5401 gttatgccta cactagcaag taaataaata aaacccttag cattttttac aagttcttta
     5461 acacgctctt taggagttgt aatgcttaca agagtaatca aagctatgtc atacttttga
     5521 cattctttat acaaaggctt actttcttca taacttagct caggaactat caaagcagaa
     5581 attcccaaag ccttggcttt tttaacaaaa ttttctaagc cgtaggaaaa aattaaatta
     5641 taatacacca taaaaacaag ggcttttttt gtttttattt tggctaaaag ctcaaatatt
     5701 ttatgaatgt ctgcgctttg ttctagggca atttttgcag cattggcgat gatctcacca
     5761 tcagcaatag gatcactata tgcgattcct aattccaaaa catcgatcga actttcatcc
     5821 aaacgcttta aaaactcttc actaattttt aaatttggat agcctaaaac catataagct
     5881 acatttgcct tatccttgta aaattttgta aaatcaacca taaattgttc cttttttata
     5941 ttctctaatc gtttgcatat ctttatcgcc tctacctgat aaattaacca ctatcacgct
     6001 ctttttgttt aacttaggac aaagtttttc caaaaatgcc aaagcatgag aactctcaat
     6061 agcagggata atcccctctt ccttacaaag catttttaaa gccatcatgc attcttcatc
     6121 ggtaatggca taatattttg ccctaccgct ttgagataaa aaagcatgca aaggaccaat
     6181 tcctggataa tcaagtcctg cagaaacact atgcacaggt aagatgtttc ctaattcatc
     6241 ttgcaaaacc ttcgttttca taccatggat aatacctgtt tttcccttgg ttaaagttgc
     6301 tgcatgataa agggtgtcaa cacccaatcc ccctgcttca attccaataa gatttacact
     6361 ctcatctttg ataaattcgt aaaaaattcc acccgcatta cttccacctc ctactgcagc
     6421 gatgatataa tctacttttt tacctaattt tttaagttga cttttgcatt cttttcctat
     6481 aacactttga aaatgtgtaa ccattttagg ataaggataa ggccctacag cacttccaac
     6541 tacataaaaa agatttttaa tatcccccac ccaagcttgg atagcagcag ttgtagcttc
     6601 ttttaaggtt ttaagtccac tttgtatagc attaacctta gctcctaaaa gctccatttt
     6661 ataaacattt aaagcttgtc gttgcacatc agtcgctccc atgtaaattt cacactcaag
     6721 tcctaaaagt gctgcagcag tagcagttgc taatccatgc tgccctgccc ctgtttcggc
     6781 aatgattttt ttcttaccca ttttttttgc taaaagtgct tgagctatag cattgttgat
     6841 tttatgtgct cctgtatggt ttaaatcttc acgcttaaga taaatttcat gtccgtattt
     6901 tttacttaaa tttcgagcaa aataaagcgg agtggggcgt cctacataag tagctaaaag
     6961 gccttgaagc tcttttttaa aggctttatc ttgtgcaaat tttaaaaaag catcttcaag
     7021 ctcatttaaa gcaaacatcg cactctcagg caaaaactgc ccaccaaatt caccataata
     7081 cgcctttttc attttctcat ctcctttaaa atatacttga ttttttccac atcttttaaa
     7141 tgattttcct tttctatctt tgaatttaag tctatgattt ttggttttaa acttaaagct
     7201 tcattgatat tatgagttcc tatgcctcct gctaaggcaa aatctttttt aaagtctttc
     7261 aaaagatccc agttaaaact ttccccattg cctccatgaa attttccctt agtatcaaat
     7321 aaaattaaat ccgcataaat attttcttcc aattccaaac gatcccctac acttaaaacc
     7381 tgccaaacaa aaactccact ttcttttaag gttttaaact caaattcact gatttttcta
     7441 tgaatttgca ctccatcaag ctttgcttgt ttgattgctt ttaaaataaa ttccaaattt
     7501 tcatcgacaa aaactcctac actcttttta aatcccgcat ggatgatatc gcttaaattc
     7561 attgcttgtt ctaaactaag ctgtctaggg ctttttgcaa aaataagccc catgaaatcg
     7621 acatttaatt cagcgatttc cttggcatta ttttcatcct taatgccaca aattttaagc
     7681 tttgtcattt agactcctaa aatactccat caccttgcca gaatatatag cctctaaaat
     7741 aatatctttt gcttttaaag gtgttgaaac tttgttggct gtataaagtg cgaacataga
     7801 atttaaaacc acgatatcaa atttagcccc ttgtattttt ccacttaaga tatcttttaa
     7861 atccttagca ttttcataag cattgccacc cataatctca ctatgaaaag ctcgcttaaa
     7921 accaaattgt tcgggtgtaa cgccgtattc ataaatttca ccctctctta cttcaaaaat
     7981 ctttgtttca tcgcaaatac tgatctcatc catgccatca ttgccacgca ccaccaaagc
     8041 tctttttcgt cctagtgatc ttaaaacttc agccaaaagc ttatgcacag gtgcatgata
     8101 atttcccatc atttgatatt taagctttaa attaggatga agtaaaggtc ctaaaacatt
     8161 aaatacagtt cttatgccaa gctttgccct aagctctctt agctcaccta ctaaaggatg
     8221 aaaatacggg gcatgaaaaa aggctaaatt tttattttgc aaatcattta aagcacattc
     8281 taaattatca ggaattttta catctaaagc atctaaaaca tcggtgcttc cacttgaact
     8341 agaaatcgct ctgtttccat gttttgctac ttttaccccc aaagctgcta aaataaaagc
     8401 acttgctgtt gaaacattga tacttttaaa attatctcct ccagtaccac atatatctat
     8461 catatcgctt tcatcactaa aggttttaga ataacgcaaa atttcacgca caagactgct
     8521 taatgatttt tgattgaggg atttttcact gattaaaaca agtaaagcag ccgcttgtaa
     8581 aggctcataa tccctgctca taataatctt gcaaatttct gaaaaatctt cactttctaa
     8641 ataatgattt tcactcattt tttgcaaata aaatccaaga gtatgttttt tatcctgaac
     8701 tgctttttct tgatttaaaa aattagcaaa aattttgatt ccgtattcgc taaaataact
     8761 ttcaggatga aactgcacgc caaaataagg taaagtttta tgttttatag ccatgataac
     8821 attatcatca ctcaaagcca aaatttcaaa atcatcgggc aaatttttaa cttctaaaga
     8881 gtgataacgc atcacactta cctcatcttc aaaatcttta aaaattgtat ctttattata
     8941 aattttaatt aaggaatttt ttgcatgcat agggttttgc aatttagcaa tttcggcctt
     9001 aaaactaaaa cccaaagctt gatgtcctaa gcaaattcca agcgtaggga tgttgagtcg
     9061 tgatttaaaa atttcaagac acactccact atcttttggg tgttttggac caggacttaa
     9121 aatgatatag tttggattta aagctttgat ttcatcaaga gtgattttat cgtttcgaac
     9181 aactaaaatt tcacccttgt atacattttc gagcatggat ttgatattga aaacaaaaga
     9241 atcataatta tcaattaaaa gtatcatctt aactcctttt agccattttt tcaaaactta
     9301 ctaataaagc tttacgctta gcgcaaattt cttcatattc tttttgtgga tcactttgta
     9361 aaactatacc cgctccactt gctataaaag ctttattttc tttaaaaaaa gccgatctta
     9421 tgataatagc taaaaccaca tcttcattaa aatttaaaaa cccaacagcg cctccataaa
     9481 ctcctctgtc taaattttca agctcattga taatttctaa agctctaatc tttggggcac
     9541 cacttaaagt tcctgctgga aaaaccgctc ctataatatc aaaaatattg gcttgcttat
     9601 ccatcgtcgc ataaacttca ctgactatat gcatgacaaa tttatttctt gttatactaa
     9661 aaagattttc aactcgcgta tttgtaccga atttagatgc atcatttcta gctaaatcaa
     9721 caagcatttt atgctcactc aattcttttt catcgcttaa aagatctttt tctaatttta
     9781 aaatatctga attttcatcc aaatttcgag tacctgctat aggagctaaa aaaatttctt
     9841 tgttttttat tttcagtaaa aactctggag aagaacctaa cacaacccca tattgagtcg
     9901 gaaaataaaa catataagca ctaggattta actcacttaa agtttcataa aattcaaaac
     9961 tatcaaaatt atgctctatg caaagctgct tgcttaaaac cacttgaaaa atatctccgc
    10021 ttaaaagata ttccttggct ttttccacac tttggataaa atctcttttt tcttcttgaa
    10081 aatcctgcaa gattttatat tcgcaaactt ttttatcgaa aacaaaatct tcttttaaaa
    10141 aatcaaaata cttattttct ccgtatttaa aaaacatttt gctagttttt tcataaacca
    10201 aataagcttt agcattggca aataaaaaat ttggaaaatc ataattttta ttttcatttg
    10261 agggtaaatt ctcaaacaaa gaaataaaat ttgcactaaa aacaccaaaa aatccagaat
    10321 atttgcaaat ttgctccctt gaagcatttt cataaaattt cgcctttaat tcgctaagag
    10381 tgatatcctt agcatcataa aaatcgcaat caatacctat aataacccta gtagaatctt
    10441 cagcaaagta agaagaagga aattctttta aaatttgcct ataatataaa tttgctttca
    10501 tttcaagcat aatacaacct ttataaaaaa taaaataaaa aaatattgag aagttaaaaa
    10561 agaagcttag aagcgccaaa aacgaagagt gtgtgttgat actaaaatta aagaattatt
    10621 taaaaaatcg tttttattca tcttctacct ttcaaaaaat taagcctcat tttaaactat
    10681 gatgactttt attaatttta gagaaaaaaa cataaaatta tcctttaata tttatttcat
    10741 tttcaaaaaa ataaatccat gtaactctgt ggaaaatatt ttgtcaaaat aagccttgta
    10801 aaacattata aaaaatttta aaactaagat aagcttgata agataaaatt actccttatt
    10861 taatcaacaa acgatataaa tttaggaaaa agtatgaatt ttacagattt gccttatatc
    10921 tttataggta tattttcagg tattacttca ggactttttg gcataggtgg gggaatgatt
    10981 atcgtgccct caatgtttgc tttaggagca agtgctcatc atgctattgg aatttctgta
    11041 ttacagatga tctttgcggc catttttggt tcttatatta attataaaaa aaagaattta
    11101 aatctcaaag atggtattgt tataggactg ggcggtcttt tgggggcaag ttttagtgga
    11161 attttattac aagccttaag cgatgtagct cttactgcta tatttttagg agtaagttgt
    11221 gtatttttta tcaaatatgc ctttggcatc aaagaaagtg ttgtaaaaag ccataaaagc
    11281 gtatgggtta aaaatggaat tttatttata gcgggagctt ttacgggaat ttttgctatt
    11341 tctttaggta taggcggagg gcttttaatc gctccaattt tagcttattt cttaggctat
    11401 gatagcaaaa aagtggtttc gctttcttta ttttttgtta tttttgcttc aatctctggt
    11461 atcatctctt ttgcaaattc aggtgtaatt gacgctgaag ttatccacaa aggtgtttta
    11521 gtaggttttg cttctatgat aggtgttttt ataggtataa aaatcataga aaaaatgcat
    11581 atttcagctc atagaaaaat tttactttgc gtatatgctt tatccatact tgcaaccact
    11641 ctttctctgc ttagaaaact tggaatttta gcattttaat ccattaaaat gctaaaaaat
    11701 ttaaaaacat aatttttata tttttatgtt aaaatgttaa atttatttaa tgcttaggaa
    11761 aaacttatga atgatacgat aaaaatcatt ggcgcaaagg aaaataatct taaaaatatt
    11821 catcttgaaa ttccaaaaaa taaactcatt gtttttacag gattaagcgg tagtggaaaa
    11881 tcaacccttg cttttggcac actctatgcc gaaggtcaac gccgttatat agaaagtttg
    11941 agtgcttatg caagacaatt tttagacaag gtaggcaaac ccgatgtgga taaaatcgaa
    12001 ggtttaaccc ctgctattgc gattgatcaa aaaaccactt ctaaaaatcc gcgttctaca
    12061 gtcggaacca tcactgaaat ttatgattat ttaagacttt tatatgcaag agtgggcatt
    12121 cagcattgcc atcaatgcgg acaaaaaatc tcatctatga gtgcaagtga tatagtagga
    12181 gaaattttaa aatttccaaa aggagctaaa atcatcatct acgctccttt ggtgcgtgaa
    12241 aaaaaaggaa cttatgcgga tttacttgaa aatttgcgca ataaaggcta tgtaagagcg
    12301 caaattgatg gggttttagt aagacttgat gaagatatag aactttcaaa aactaaaaaa
    12361 catacgataa aactcgtcat tgatagactc gaaatacaag aagatctact ttctcgcctt
    12421 gcaagcgata tagaaaaagg tttggaagaa agctttggag aaatcgagat agaagtctta
    12481 aatcccgatg aagtaggact taataagcac tatcacttta gcgaacactc cgcttgcttt
    12541 gcttgtaaaa tttcctttgt tcctcttgag cctttaagtt tttcttttaa ctctccaaaa
    12601 ggggcttgtg aagcctgtga tggacttgga attcgctata ccctagatat gaaaaaaatc
    12661 atcgatgaaa gcctaagtct tgaaaatggc gcggtaaaaa taatgtatgg atttaacaaa
    12721 agctattatt ataaattttt aattgctttt tgcgagcaaa atgaaattcc tattaaactc
    12781 ccttttgctg aacttagcga agaacaaaaa cgccttgtgc tatacggaaa tgcaaaaacc
    12841 attgactttt tttggaaaag aaatcgcctc aaacgcacct ttgaaggtgt ggtaaaaatg
    12901 gcttatgaaa tgctaaaaga tgaaaaagac ttagcagaat acatgagtga aaaaatttgc
    12961 aaagattgtg caggtcatcg tttaaaacct gaaagtttag ccgtaaaaat agcctctaaa
    13021 ggactaggcg aaattttaga tatgagtata gaagatagca ctagcttttt tgcaaataag
    13081 aaaaatttct cttatttaag cgagcaagaa agacttatct ctgaacccat attaaaagaa
    13141 atcaacgaaa gacttttctt tttatatgat gtaggactag gctatttatc tttaggacgc
    13201 gatgcaagga cgattagcgg aggtgaggca caaagaattc gcatcgcttc acaaattggc
    13261 agtggtttaa gtggggtgat gtatgtttta gatgaaccta gtatcggact tcatgaaaga
    13321 gatacagcga aactcattaa aaccttaaga aatttacaac aaaaaggcaa tactctaatt
    13381 gtcgtagagc acgataaaat gactatagaa gaagctgatt ttatcgtaga tattggccca
    13441 aaagcaggaa aatttggagg cgaagtggta tttgctggaa cttataaaga acttttaaaa
    13501 agcaaaagtg aaaccgcact ttatatgaac ggcaagaagc aaatttcaca gcttcaaaac
    13561 agagaacaaa aagaatggct agaacttaaa aatgtaaata tcaataatat caaagatcta
    13621 agcgtttctt ttcctttgca aaatttagtc gcgatcacag gtgtttcagg atctggaaaa
    13681 agctctctca tacttcaaac cttactgcct tttgcacaag aagaattaaa ccgcgccaaa
    13741 aaagtaaaga aattaggtgg ggtgcagatt gaagggcttg aaaaactaga taaggttatt
    13801 tatcttgatc aaagtcctat aggacgaacc ccgcgatcaa atcctgctac ttatacaggt
    13861 gccatggatg aaattcgcaa tctttttgct gctaccaaag aagctaaaat gcgaggctat
    13921 aaagcggggc gtttttcttt taatgttaag ggtggaagat gtgagaaatg cagtggcgat
    13981 ggagagatta aaatagaaat gcacttcttg cccgatgtaa tggtggtttg cgatacttgc
    14041 catggcaaac gctataatga tgccacacta gagattaaat acaaaggtaa aaatatcagt
    14101 gaaattttaa atatgagcgt tttagaagca agtgaatttt ttgcagctgt gccaaaaatc
    14161 aaacaaaaac ttgatacctt agtaaaagtc ggacttgatt atcttaccct aggacaaaat
    14221 gcaacgactt taagtggggg tgaagcgcaa aggataaaac ttgcaaaaga attaagccgc
    14281 agtgacacag gaaaaacgct ttacatactt gatgagccga ccacagggct acattttgaa
    14341 gatgtcaata aactcatttt agttttacaa cacttagtcg atcttaaaaa ttctgttttt
    14401 gtgatagagc ataatttaga tgtgattaaa aatgctgatt atatcatcga tatgggtcca
    14461 gaaggcggag taaagggtgg aaaaatcatt agtacaggaa gcgtggaaaa agttgcaaaa
    14521 gatcataaga aaacaaaatc ttatacagga tattatttgg atttagagct taaaaacgca
    14581 aagagttaaa atgacacagg aacaaaaaat atcatttttt aagattaaaa gattaagtat
    14641 ttatatattt ttttgtgctt tatataattt tttttacttt ttttcttatg aaaatgtggg
    14701 aagtttacat tgtgaatttc tttgtatcag cggtagattt ttatgctttt tttcttggat
    14761 ttatatagtt cttgctttta tttttatggt ggcaagaatt tattttttat tttcttctaa
    14821 gaaaatttta atttattttt tgcttgccat tataagcctt ggctcatctt tttttctttt
    14881 ggaaaataaa attttatttt tagggctttt agctttattt ttcgtttttt attttttatt
    14941 ttcactcact cttgcttcgc tttttaaaga agtaaaaatg tccttttatt ttgtgttttt
    15001 atgtatgctt ttagcatttt tattttttga gaaattaagc tttttatttt tctttcttgc
    15061 tttacatttt ttaacttttg cttatgcttt tgataggtat gaaactttaa aaaagctgta
    15121 ttgagttcaa ttttaaagga agaaaatgtc aaatttaaac tttcatcaaa tgtttgaaat
    15181 tcaaagacaa aatgatttta aaagtatcaa aaagcttgcg tgggtagttt ttataagttt
    15241 tttactttgt gtttgttttc agtttttacc cattattctt gattttgcct atgatttaaa
    15301 attgttgaaa tttaattcta acactaatat tttagctatg gtttttaatg caattttttt
    15361 aatttcttat ttgattatga ttttaaaact ttattttgta agtcaaagta aggttttatt
    15421 gatcagtttt tttatagctg catttactca atttatcgct ttattaagct tgaattatct
    15481 tattgctagt cctgttgttg ataagatatt acgtattttt ctatatggct tttctttttt
    15541 atgtcttgca atagccattt tttgtacttt tatatttttt aagactttaa aaactttatg
    15601 tgaaaataag atttatttta aactttgttt tattttcaaa agtgcgattt tgataattat
    15661 ctatatactt atgtttgttc taatttatag cgagcattct cttgctttaa ttatcgctta
    15721 ttttatgatt tttttctttg caggcttatt atttaccatt tattacgcac tatttgcttt
    15781 cgcgcttagt aaaaaccaaa atatcaaatt atcccaaact taaagcttat atccaatgaa
    15841 aaagaaaata tttaaattta gtattttatt taccattttt ataagtctaa gccagagtac
    15901 tttggttttt atttttaatc attatttaat tattgattat agtgcttatg aaacactgcc
    15961 acaaagcttt gcaatgctaa atttagccga tcaaaaactt tatcatttaa cgcaaaattt
    16021 acgcttttta cattctattt tagctttttt attaataata tcatttttct ttgtgcattt
    16081 atttttcttt tatatttcca gaaaagaaaa atttatacct tattcctttt tttgttttgt
    16141 gcttatggta ataagtgcta ttgctaattt acttgaaggt atagagcaaa aagaaagtat
    16201 tttttggtat tacaaggcat ttcttgatgt tggtgtttgt ttaatttatc ttttgttttt
    16261 agataaattt tttcaaagtc acctttttaa aatctttttt gtatgtgctt gcttgtgtac
    16321 aattttaaca aaatttaaat ttatggattt taccacgcct tttgttttgc ctatttatct
    16381 ttttatttta ttgattttaa tgcgtaaaaa gagctttaat gtttgatttt ttatataatg
    16441 atattagcta cttagggctt tttatcgtat gttttctttc aagcacgctt ttgcctcttg
    16501 caagtgaagc ctttgttgta gcttttataa aacttgattt taatgctcat ttggttttat
    16561 ttatagctac tttaggcaat accctaggaa gcttaagcac ctatgctcta gcctatcttg
    16621 gcaaagaaaa aattttagaa aaatattttt ccaaatcttt aaaaaagctt gataaattca
    16681 atgcaaattt tactaaattt ggaagtcttt atgctttttt aaccttttta cccttaatag
    16741 gagatatctt tgctttaggc cttggttttg caaaataccc tttcatcaaa gcttgttttt
    16801 tcataagtct tggcaaatta agccgctata tttttataat ttttatcgct aattctttat
    16861 aaaaatcatc aatctttaaa gtgaattttg ggataataat ttaaaaccca ctaagaaaga
    16921 caaccatgaa aactttaact attatcgata cttttggctt cttttttcgt ctttattatg
    16981 cactcaaagg atttaaaaat tctcaaggac aagctagtgg aatgattagc ggttttgcta
    17041 attttatcta tagtcttaaa aacgaatata aaagcgatta tattattttt gcactagatt
    17101 ctaagggcaa gacatttcgt agcgatattg atccaaatta taaaaaaaat cgcaccccgc
    17161 ccccacccga acttttggaa caaattccaa tttgtataga aatgatagaa aaaatgggct
    17221 ttatgagtgc ctcttacgag ggttatgagg cagatgatat catcgcttca gtggttaaaa
    17281 cttgtaaaga taaagatatt tttgtacgca ttataacaca ggataaagat ctttatcagc
    17341 ttataaaaga tggtaaaaca agtatttata gccctatttc aaaaaatgac tatgatgaag
    17401 aagcttgctt tgagaaatac ggtgtcaaac cttatcaaat taaagatttt ttagccttat
    17461 gtggagatag ctcggataat atcccaggag ttaaaggcat aggagcaaaa ggtgctaaaa
    17521 cattgcttga tgagtttgga agtatcgaag gcatttatga aaatttgact ctagtacgca
    17581 atgaaagaag tcgtaaattg cttctagaag gtaaagaaaa tgcttttctt agtaaaaaac
    17641 ttgcttcttt gtatgaggat ttagaagtaa gcaacttgtt agaaaaagct gattttcctc
    17701 aagatgagcc tcttttaaaa attcttgaaa ttttagagca ttatgaactc aatgtcttac
    17761 ttaaaaaact tcgccaaaac cccgataata aagataaaaa tttaggcttt aaagccactc
    17821 ttatccaaga tgaagacaaa ctctttgaaa ttttaaattc tcttgaacaa gaaagtatca
    17881 tagcttttga tactgaaacc acaagcattg ataccaaaga agcaaaaatt gtaggattta
    17941 gtttttgtat gagtgaaaat gaagcctttt atgtacctct tactcataat tatttaggtg
    18001 tgggtaagca agtatcatta caaagcgcta aaaaagctat agagcttatt tttaaacatt
    18061 ttatcatagg gcataatctt aaatatgatt ttaaaatcat agaaaataat tttaaactct
    18121 ctttgccgca aaaatatgct gatactatga ttttagcatg gcttaaaaac ccttccttaa
    18181 gagtcaatat ggatgatttg gctctaagac tttttaatta tgaaacctta cattttgaaa
    18241 gtcttgtaaa aaaaggagaa aattttgcaa gcgtagagct tgaaaaagct tgcaagtatg
    18301 cagctgaaga tgcttatatc actttaagat tttatcttta ttttttaaaa aatcttgaac
    18361 ctcatttgct tgatcttgct aaaaattatg aatttgattt tattaaaatt attatgatga
    18421 tggaagaaaa tggcataaaa ctcgatacgc atgctcttga aattctcatg aaaaaatttg
    18481 aatctgaaat taaaatttta agcgaagaaa tctatgcttt atgtgaagat agattcaatc
    18541 ttaattcccc aaaacaagta ggcgatatac tttttgaaaa actcaagctt ccaagtggaa
    18601 aaaaaggtaa gacagggtat tctaccgatg aaaaagtctt aaatgaactt ctcgataaac
    18661 atcctgttat ttctaaaatt ttagattata gagaactggc caagctttat tcgacttatt
    18721 gcgagccctt gttaaaactt gctttaaaag atgaaaattc aagaatttat tcgagctttt
    18781 tacaaacagg tactgctaca ggccgtcttt catctaaaga tcccaattta caaaatatcc
    18841 ccgcgcatgg acaatatgca aaagattata aatcctgctt tatagccaaa gagggattta
    18901 gttttatcag ccttgattat tctcaaatcg aacttagaat gctagcgcac tttagcgaag
    18961 atgaaaaact tttaaatgct tttaaaaacg atgaggatat acatgcaaga accgctataa
    19021 tgatatttgg cgagagtaat tatgaaacaa gaagtatagc aaaaagtatt aattttggct
    19081 tgatttatgg tatgggttat aaaaccttaa gcaaaaatct aaaaattgaa gccaacttag
    19141 ctaaaaccta tatagaaaaa tattttgaaa attttactag cattaaaagt tatttcgaaa
    19201 aagtaaaaaa tgaagccaag gctaatggtt ttattagcac cttaagcgga cgtaaacgct
    19261 attttgactt tgaaaatgct aaacccatgc aagtggctat gtatgaaaga gagagtataa
    19321 attcgatttt acaaggatca gctgcagata ttataaaatt tgccatgcta gaaattgcta
    19381 aaattttaaa tcaagataaa aggcttatct tgcaaattca cgatgaactt atctttgaag
    19441 ttaaagatga attatgtgaa aattttgtga aaaaaactag tgatattatg gaaaatatag
    19501 taaaattaaa ggtaaaatta aaaacaagct caagtatcgc caaaaaatgg ggcgatttaa
    19561 aataatcaag gagtgattta atggatcttt caaccatatt aggaatggtt cttgcagtaa
    19621 ctagtatctc agtaggagat atactcgagg gaggaaatcc tctgcatgtt atccaccttt
    19681 cttcttttct aatcgttatg ccaacggcag ctttttgtgc catgacttca actcataaaa
    19741 aaattgtaaa agcagcctat aaagaactta aaatcgtttt taaaggttca ggtgtaaatc
    19801 tacctgaaag aatagctcag cttatcgaat tcgcaattat tgcacgccga gatggtcttt
    19861 tggctttaga atcaagaaca aatgaaattg aaaatgaatt tttaagaaat gctatgatga
    19921 tgctagtaga tggaaaaagt tttgaagaaa ttcatgaaag tatggaaatt caaaccgaac
    19981 aacttgaaga acactataaa gaatgtgcag aatactggat aatctttggt gaaacttgtc
    20041 ctactatggg acttgttgga gcggtttttg ggttgatttt agcactgaaa cttctagata
    20101 atcctcaagc aatggcagca ggtatttcag gtgcttttac ggctacggtt acaggtattt
    20161 tcggtgcata tgcacttttt gctccttggg gaagaaagat gaaagctaat ggtatggatc
    20221 ttgtaaaaga gcaaattgtc attactgaag ctataaaagg aattgcagaa ggtgctaatc
    20281 ctagagattt agaagctaaa ctttttaact tcttaagtca cgatgatcca agaatttcac
    20341 aatttgacaa aggttaaaaa tggctaaaaa acataaatgc ccagaatgtc cagcaggtga
    20401 aaaatgggct gtgccttatg cagactttct aagtttgctt ttggcgcttt ttattgctct
    20461 ttgggcaatt tctaaaacaa atccagctaa agtagaagca ctgaaaaccg aatttgtaaa
    20521 aatctttgat tatactgcaa cccaaaccgt gcaacaagaa acacaagata cttataaata
    20581 taagggttct caagaagaaa aagaagatga attgagcaaa cttaaacaaa tggccgtaaa
    20641 tcaacaagaa gttattaaaa aacttcaagc cgctcttgat caatccgaaa atcaagaaat
    20701 acttaaccta ccttccaagg ttgaatttga aagaggaagt gcacaaatag tatctgcaga
    20761 tattcaagat tatcttaaac gcattgctca gcttatttca tacttacctc ctcaaataga
    20821 aattgaaatc agaggttata ctgacaatag tgactcagcc ttaagaagct atgatctagg
    20881 ctatacaaga gcagaaaatg ttttaaaata tcttatagaa ggcggagtta gcaccaaaaa
    20941 tataaacctt aaaagctatg gattaaatag tcccatcaat ggaaatccac aagctttaga
    21001 aaacaataga gtgcaaattt attttaaagt agatattaag gataatgacg caaaacaatc
    21061 agtgcttgat cttatagaaa aaagcaaata ataaaattta tttgcttaat tatttttctt
    21121 gacctgtcct gctaaacgac ttttattgtt agtattgtaa acaaatccaa gtacctctgc
    21181 tacagcttta aacatttctc taggaataag atcattaata tcacaagcct tataaagctc
    21241 tctcgctaaa ggcggatttt cataaacaac tacattatta tcataagcaa cctgttttat
    21301 acgaagtgcc aaaaaatcta ctcctttagc cacaactcta ggagcttgtt cttttgttgt
    21361 atcataacga atcgctacag cataatgcgt cgggtttgta ataaccacat ccgcccctgc
    21421 aacatcttga accatacggc ggcgtgctgc ttccatttgt aagcgacgaa tcctcccttt
    21481 tacctgagga tctccctcca tttgcttgta ttcatcttta atttcttgct tgctcattcg
    21541 caagccttta aaatactgaa aacgcaccaa aaaaatatcc aaaacagcaa tcactaaaaa
    21601 tgctatgatt acaatagctg ccaaaataat agccctatcc ctaagccaaa tgagttgtcc
    21661 aatgatatta taacgctcaa ccaaaggtaa ttcttgcata aattttaaaa gcactataaa
    21721 agctacagta aatactacgc ctaccttaag cacgatctta acactctcga caagcttttt
    21781 taaagaaaat aaatttttta agccttttaa tggattgatt tttcctaaat taggcattat
    21841 aggtttggtc gtaaaaataa aaccaaactg cataacatta cctaaaatac ctgcgatcat
    21901 aatactcaaa actataggtg ctagcaaaat caaaacttca aaaatgcttt taatcataat
    21961 ggcttggata atacgcaaat caaattcaac acctataaaa ctttgataat atctatatag
    22021 attagtaatt ctttcaccga taaaacccat cataaaaagt gtaatcacaa aaccaactat
    22081 taaagtaaca atagctgctg cgtcttggga tttggggaca ttgccttctt ttcttgcgtc
    22141 ttctattttc ttggacgtgg gttcttcagt tttttcttga tcttcgcctg ccataattag
    22201 cctaaattta agtttataaa attagataaa attatataaa aaaatgatga attttaatta
    22261 aagttaagag aagaaatttt atcaagaaga aaagcccttt tttaagggct tgttattata
    22321 gtttatcttc gtttttatca agatactcag caacaccttt agggttagct ttcataccag
    22381 catcaccttt gttccagcct gcagggcaaa cttcaccgtg ttcattagtg aaaagcatag
    22441 tatctaccat tctgatcatt tcatcaatat ttcttccaag tggtaagtca ttaactacag
    22501 cgtggcgaac tgttccatct gcatcaagca agaaagaacc acgaagagca actgcttctg
    22561 cataaagtac atcaaaattt ctagcaattt gtttagttaa atctgcaaca agtgggaatt
    22621 taacttgacc aataccccct tgatttactg gagtgttttt ccatgcaaaa tgtgaaaatt
    22681 cattgtcgcc tgaaattccg attacttcaa taccacgatt tttaaattct tgatatcttt
    22741 tatcaaaagc aattatttct gaaggacaaa caaaagtaaa atcttttgga tagaaaaata
    22801 ctaccgcacc ttttgggcct atatttttat aaagattaaa atcttcaacg atttcgttat
    22861 ttcctaatac tgctggagca gtaaagtcta aagctttttt tgtaactatc atgtttttct
    22921 cctaattaat aaattttatt gatagcgaaa ttatatcgtt taaatccttt aaagattttt
    22981 aaatgataat aaatttttga aaatattttt tatagtattt tatattatat tataaatgat
    23041 aatcaaaatc taaaaattat caaatatata tattttttga ttatcaaaat tatagttttt
    23101 taagaatact ttgataaaat gcttagttga aaaaagtaaa tttcatatta atcaaaaagg
    23161 agacaaaatg gctgtaaaaa ttacagatag ttgtattgct tgtggttctt gtattgatga
    23221 gtgtccagtt agcgcaatcg ttgacgatgc aaacaatcca gagggcgaag atagatatta
    23281 tgtctatgcg gataaatgtg ttgaatgtgt aggacacaat gatcaaccag cttgtgcaag
    23341 cgcatgccca actgatggct gtatagtatg gagtgaaatt gcttcagggc aaccaagtcg
    23401 tgataatatc ggtagcgata tgagagatgg aactacccca gtttttgcat aattctacaa
    23461 aggctagtta aaaagctagc ctctttttaa ctttttttaa acaaattcaa gtataatttt
    23521 aagctttata aaaaccaagg agtataatca aaatggaaaa aaccctatcg attatcaaac
    23581 ctgatgccgt aaaaaaaggt gttataggta aaattttaga tcgtttcgaa agtaatggat
    23641 taagaattgc tgctatgaaa aaagttcaac ttagcaaaga acaagctgaa gctttttatg
    23701 ctgttcacaa agaaagacct ttttttaaag atttggttga atttatgatc agcggccctg
    23761 ttgtggtttc tgttttagaa ggcgaaggtg ctgttcttaa aaatagagat ttaatgggag
    23821 caacaaaccc aaaagaagca caacctggca ccattagagc agattttgct gaaagcattg
    23881 acgcaaacgc tgttcatgga agcgatagct tagaaaatgc aaaaattgaa attgaatttt
    23941 tctttaaatc taacgaaatt tgctaatgaa aatagccttt tctaggatta acaatactaa
    24001 ctatcctttt aaactcaatc ttgaaaatgt tgtttttgaa ggaaatttag taaaagtaaa
    24061 tcctaaactt gttaaaataa atgccacaat gcaaggtttt gtttatagac cttgtgatag
    24121 ctgtggtgaa gaacttgagc ttgaaataaa agaaaatttg gatctttttg caagtgatgg
    24181 tatttttaaa gataatacga atgaattaag caataccatt gaattttttg atggtcatat
    24241 tgatttaata gaagttgcag ttagtgagct tgaagcttat ttgagtgatt atttttattg
    24301 taataattgc aaaaataaaa gctaacaaat tttaaaaaag gagataaaat ggcagtacct
    24361 aagagaagag tgagtaaaac tcgtgcagca aaacgcagaa ctcactataa agtaagtctt
    24421 cctatgccta taaaagacaa agatggaagc tacaaaatgc ctcatcgtgc aaatccaaat
    24481 actaaggaat actaaaatca atgattgaca ttgctataga tgcaatgggc ggagattttg
    24541 gagaaaagcc cattatagaa ggcgttatcg aggctttaaa agaaaggcct tttaatgcta
    24601 tcttagtggg aaatcccaat attttaagac ctctaatacc taaaaattta gaacaataca
    24661 ttcaatatga gaatgccaat gaagttttct ctatgaatga aaatgcaaca gatgccctaa
    24721 aaagaaaaga aactacgatt tataaaacca tcgaacttgt caaaaatgga aaagcaaaag
    24781 ccgctgtttc agcaggacat agtggtgcaa gtatgtcttt agcaacttta agattgggca
    24841 gactcaaagg agtattacgg cccgcaattg caaccttaat gccaaatact acaagtaaaa
    24901 ctttgttttt agatgtgggt gcaaataccg actgtaaagc cgaaaattta tttcaatttg
    24961 ctataatggg cgatgcttat gcaaaagaaa ttatgaaaat ttcaaaacct cgcctggctt
    25021 tattgtctaa tggcgaagaa gagtgtaaag gcaatgaact tactaaagag gctcatcagc
    25081 ttatgaaaca aattcctagt tttgttggaa atgctgaagg tagagatatt tttaatggtg
    25141 aagttgatgt cttagtttgt gatggatttg atggcaacgt aatcctaaaa gcctgtgaag
    25201 gcgtagctac agcaattatc cacattttaa aaaatgaaat caagcaatct ttgatatcaa
    25261 aaataggcgc attgctaatg aaaccttcat ttaaaagact taaaaaacat attgattggc
    25321 aagaatatgg cggcgcccca ctgcttggtg tcaacggctg cgttattata agtcatggaa
    25381 aaagcgatgc tagagcaatc aaaaatgcta tttttcaggc tattaacttt agtgaatcaa
    25441 atatcaatca aataatagaa aaggagcttg agaaatacaa tgcctaaagc gagtttaaaa
    25501 agtatagctt cttatatacc tgaacaaatt ttaagtaatc acgatcttga aaagattatt
    25561 gatacaacag atgagtggat cacaagacgc acaggtataa aagaaagacg cattgcaagc
    25621 aaagatgaaa gcacaagtga tttaggcacc aaagcagcta taaaagctat agaaagagcg
    25681 aatttaaaac cacaagatat tgatgcgata ctagtagcta ccttaagccc tgattatttt
    25741 accatgcctt caactgcttg taaaatcgca gcaaatttag gacttaatgg aatcagtgct
    25801 tttgatattt cagcagcctg ctcaggtttt atctatcttt tagagcaagc taaggctctt
    25861 gtagaaagtg gtttgaaaaa aaatgtttta atcataggag ccgaaaaggc aagctctatc
    25921 atggattata ccgataggag tatttgtata ctttttggcg atggtgcagg tgctggagta
    25981 gtaagtcttg atgagaacaa tcctataatc gatgtacata cagcaagcaa tggaaattat
    26041 ggtgatttac taatgacaga acgctctcaa gaatcaaaag aagcttcaag cctagcaatg
    26101 aaaatgaaag gtaatgaagt ctttaaaata gcggtgcaaa ctttaagcaa tgatgtcgtt
    26161 gaaattttat ctaaaaatca aattttgcct gaacaaattg atctttttat cccacaccaa
    26221 gcaaatttac gcatcattaa agctgtgcaa gaaagactga atttaagcga tgaaaaatgc
    26281 gttgtaactg tgcacaaata tggcaatacc tcagctgctt ctatccctat ggcgatgaat
    26341 gatgcctatg aagagggtcg tcttaaaaaa gggaatttga tcctgcttga tgcttttggc
    26401 ggtggtttta cttggggttc tgccttactt aaatttggtg gtgagaattt ctcctaaaac
    26461 cttaaattta cattttaaca ctgtgtaaaa tttaccttaa aaaagatttg aaccaaatct
    26521 aattaaactt tctatatctt aatactagat attttattgg attaaattta ttttgaaaat
    26581 ttacatattt ctatttttac ttttttggga ttttttattt aaaacttgag taaattttct
    26641 gccacctttg agtgaatttt atgcaaagtg gcagaaggat tagtttagtt atatttttta
    26701 gcaaattctt tcataaattc acacagggtt ttaacctgat ctaaagtaac agcattataa
    26761 atacttgcgc gaattcctcc taaaattcta tgacctttaa gtcctagcat acccacttct
    26821 tcagcttctt ttacaaatat tggttcaagt tctgaatttt tagcgatatt aaagcttaca
    26881 ttcatcaagg atctatcttt tttatcagca tgtcccttgt aaaatccttc acttgaatca
    26941 atacactcat aaagcatcgc agctttttga gaatttttag catcgatagc atctagtcca
    27001 ccttgatcta aaagccattt catttcaaga ttaaacatat aaattgcaaa agtcggagga
    27061 gtattaaaca aagattgatt ttgtgcatgt atggagtatt ttaacatact tggcaagttt
    27121 ttattttgag atctttctag catatctttg cgtataaaaa gacagctgat gcccgaaatt
    27181 cctgcatttt tttgtactcc gccataaaaa agcgcaatat ttgaaaaatc aacttttctt
    27241 gagaaaaaat cactcgaagc atcgacgatt aaaggggctt tggttttagg atagttttta
    27301 aattgtgtgc cataaatagt attatttgag caaatatagg cataatcggc attatcacta
    27361 aactcaactt gaggtatgtg atcaaactta ctttcttcac tactagcaac aaccttgaca
    27421 tttaccccta aaatttgagc ttcttttata gctttttgag tccaaactcc tgtatttgca
    27481 tactcacaaa ccccgcctaa agataaattc ataggtatca tagcaaattg caaactcgca
    27541 ccaccttgca aaaataaaac ctcatagtca tcatttaaac cataaagttc ttttgctttt
    27601 tgcattgctc caaaatgcac ttcttcaaat acttttgaac ggtgagaaat ttccatgata
    27661 gaatagccct tgccctgata atcacaaagc tcatttttgg catattctaa aagctccaaa
    27721 ggtaaagtag atggacctgc gctaaaatta atttttctca ttatttttcc ttatagaatt
    27781 tttgcttctt tttgtaaagt ttgagaactc aaagtgatga tatcttcact ttttagctct
    27841 tctaaatttg ctattttacc atttttttta atggaaatta ggtttttgct ttttttaaaa
    27901 aaattttcat gctgaaaaaa agcattttgg agtttttgca gttctaattc agctttttga
    27961 attttgcttt ctattatgat ttttgcttgc ttaagcaaaa atgcaagctg tttttctttt
    28021 gcctctatca tagtttctaa agattttgct ttaaaaaatt tgtgtagatt gctgagtaaa
    28081 ttttcacaat attctaattt actttcccaa agctttgtca atttttcttc caaaaggtca
    28141 agtccttgtt ctaaatcaag tctagaataa agcaaagtat cgatagcagc tgatggagtg
    28201 ggtgctctaa aatcagctac aaaatcactg atcacataat caatctcatg accaattgcc
    28261 gaaataatag gtgttttagc tttaaaaatt tcccttgcta agccctcatc attaaaacaa
    28321 aaaagatcct ctctgctacc accccctcta gcgataatga taacatctaa tcctatctca
    28381 tcagcttttt ttaaagcttg aatcaaagaa taagctgcgc cacttccttg cgtaagtgcg
    28441 ttaaaaacat aaattttagc tagaaaatat tctttttgat tgataagttt taacatatct
    28501 tgcaaggccg ctgaagtctt tgaagtgatg attccgattt ttttagggaa ttgaggcaag
    28561 gtttttttat actcactatt aaacaatcct tctttttgca agcgctcttt taatgctaga
    28621 aattgagcct ctaaatctcc cattcccgct tttttcatgc tacttgcaat aaattgataa
    28681 cgcccacttt cagcatacaa actcacactt ccaacaagct ctaaaaaatc acccacctta
    28741 ggctgaaaat caacttttaa atttgcaccc ttaaacatag cacaagctat acttgatttt
    28801 tcatctttta gatcaaaata ccaatgtcct gatccgtgca tggtgatttt tgaaagctct
    28861 ccgcttaaaa caatatcatt aagatgtgtt tccaataaag ccttggcttt taaatttaat
    28921 tcgcttactt tcatgatttt ccatatataa agtattacaa aaagtatcaa tttaactata
    28981 ttttgtataa taaagttaca tttttttaag aattttaatc tctatcttat aaaaatagta
    29041 aattttataa aaaagattat atataatact tatatatttc aaacttaaaa attaaaggat
    29101 tttatcatga aattaaaaat tttttgttct gttttgattt ttggtttttc gttaactttt
    29161 gctaaagaac ctaaccgtcc cgagtgtatt gccccagctc aacctggagg cggttttgat
    29221 ctaacatgta agctaattca agtaggtatg cttaaagcta acattatttc aactcctatg
    29281 agagttacct atatgcccgg aggagtaggt gttgtagctt ataacactat ggttaataat
    29341 agatctaaag atggtaatgt tgttgtagct ttttcaagtg ggacattact gaatatagcc
    29401 acaggaaaac atggaaaata taatgaaaat aatgtcaaat ggcttgcttc agcgggtgta
    29461 gattacggaa tgatagccgt caaatcagac tctccttata aaaatttaga agatctaata
    29521 aatgccttgc ataaagaccc aaattctatt agtataggtg cgggaggttc aataggagga
    29581 caagactgga tgcaaacagc attacttgca aaaactatta atatcgatgt aaaaaaaata
    29641 cgctatgtgg cttttgaagg aggaggagat gctttaactt ctcttttagg aaatcatatt
    29701 gatgtgatta gcgcaggcat agctgaactt gtacctcaaa tcgaaacagg aactattaga
    29761 gtattggcta tcttttcccc aaagagactt ccgggcactt tagcaaatat tccaaccgct
    29821 aaagaattgg gctatgaggt agaatggcca gtaattagag cttactatat gggggcaaaa
    29881 gtttcagacg aagcttataa ttggtggctt gatgcatttg ataaatttca acaaacccaa
    29941 gaatataaag atcaattaaa acaaagatct ctatttgaat tcgataaaaa aggtaaagag
    30001 ttagaagatt ttgtcaaaaa acaaactgat caatacagaa ttttagcgaa agaattcgat
    30061 cttataaagt aaaatcatgt caagtataag aattgtcgct gaaattttat tggttataag
    30121 tttaattgga atttacatag ggtggaatat acattcagat tttaattatg agcccttagg
    30181 accgcgtcct tttccagtag gtactttaat tttaatcgcc ctttgttcta tatttcttgt
    30241 ttttttctct gaagatacta aggttaaatg gggtgatttt attctttgga aaaagctcat
    30301 cgttttaact ttagcttttt taatttatgc gctttttttt gagtttttag gctttataat
    30361 ttgcacaatc tttttaattt ttacaataac tttacttttt ggggcaactt taattaaagc
    30421 tattgttttt tctatctcaa gtagtattat tttatactat ctctttaata ctttattgca
    30481 aattactttg ccgtttggtt ttatatttga taatttttaa ttaaaggaaa tttatggata
    30541 cttggatgta tttaatgcaa ggatttagca tagccttaga tccttataat attcttatag
    30601 ccttaatcgg ttgttttata ggtactattg taggtatgct tccaggactt ggacccatta
    30661 atggagtagc cattttactt cctctagctt ttgcaatgaa tttacctgca gaatccgcaa
    30721 ttattttact tgcaacggtt tatatgggtt gtgaatatgg aggtagaatt tcttccatac
    30781 tacttggaat acccggagat gcagcagcta ttatgacaac cttagatgga catcctttgg
    30841 ctaaaaaagg tcaagcagga aaagctctta gcatctcagc tcttagttct tttattggtt
    30901 catttatagc aatttgcggt attatacttt ttgctccact tattgcacaa tggtcgttaa
    30961 aatttggtcc tgctgaatat tttgctctta ttgtctttgg tttagcaact ttaggaagta
    31021 tgttggccca aaaacctata agatcttttc tatcagcttt gataggactt tttttaacca
    31081 ctataggtat agatggaaat acaggtgttt atcgctttac ttttgatagt ccacatttat
    31141 atgatggaat ttcttttgtt gttttagtaa tgggactttt ttctgttagt gaaatttttc
    31201 taatgctaga gcatactcaa acaagtcaaa acatcatcaa taaaacaggt aagattttgg
    31261 taaatatcaa agaattcttc ttttgctttt ggaccattat aagatcctct attataggat
    31321 tttttgtagg agttttaccg ggtgctggag caactatagc tagcgccatt acttatatga
    31381 gtgagaaaaa aatagccggt gaaaagggta aattcggcca aggagattta aaaggtgtgg
    31441 cagcccctga agcagctaat aatgcttcag cctgtggttc ttttatccca atgttaacac
    31501 ttggtcttcc aggttcagga acaactgcgg ttatgatggg cgcattaaca ctttataata
    31561 ttactccagg tcctacaatg tttactgatc aagtaaatat agtgtgggga cttatagctt
    31621 ccttgttatt tgcaaatgta attttacttt taatgaattt gcccttggta ggaattttcg
    31681 taaaaacttt aaacatacct atgtggagct tggctccaat tatagcaatt gtttcaatta
    31741 taggtgttta ttctatcaat agtactgatt ttgatatcat tttaatctta attattggta
    31801 ttttaggcta ttttttaaga aaacttgaat ttccaatggc tccacttata ctcggttttg
    31861 tattaggaga acagttagaa accaatctaa gaagagcttt atctatcagc aatggagatt
    31921 tttcaatact ttggagtggg atcatagctc aaagtttact gataggagct gtgctaatta
    31981 tactaatacc ccttttaata aaaaagctaa gaaagtctaa attttagact ttcttagcta
    32041 taaacataga acttacgccg aaactaaaac ttttaaattc aagcatttca aaacctacct
    32101 gtttaagttc ggcgataaat tcctctttac ttaaaaaacc ttctatagaa ttaggcaagt
    32161 attcgtatgc acttttattt ttgcttatca ttcctcccaa gcttggtaaa atatttttaa
    32221 gataaaaatc cctacaagag gctacaaaac ctcctttttc tcttttagta aattctaaaa
    32281 ctacaaaaat tccatcttgt ttaagcactc ttgaaaattc tctcaaggct ttttctctct
    32341 ccactacatt gcgtatccca tagcttatac ttacgatatc aacactttca ctttgcaaag
    32401 gcaattcttg cgctccagct tctataaatt cgatatttgg gaatttttgt tttgctatat
    32461 ttaacatacc ctcacttgga tcaatacctt tgatgtgggc tatattttta tttaattttt
    32521 tcgcactttc ttgccaaatt tctatcatat ctcctgtgcc acaagccacg tcaactatgt
    32581 ttaaattatc cttttggtaa agctttaaaa ctcttttaca agcaaattta cgccaactta
    32641 catcaacacc aaaactcaaa attctattag ccttatcata ggtcggagct atttcattaa
    32701 acatttttat gattttatct tgcttttgca ttaatatcct ttataaattt tcaatttctt
    32761 acttgcttta tggattaatt ttccaagttt ttcttttttc ttggttaatt ttaaaagcgt
    32821 ctttttttca agatcgcaaa taaaatattt attatatagt ttgctcaaaa ttttcaaatt
    32881 atataaatta tgaaaatatt
//
LOCUS       DAQUWA010000010        32694 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.010, whole genome shotgun sequence.
ACCESSION   DAQUWA010000010 DAQUWA010000000
VERSION     DAQUWA010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32694
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.010"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            73..1599
                     /locus_tag="R8X70_000408"
     CDS             73..1599
                     /locus_tag="R8X70_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEF2928220.1"
                     /translation="MQKDNLIAFIIFTISVIAFIIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIF
                     PEQFDPMLFVAIMLAALLSSGVWIFIATKKGLPVSTTHSIIGGIVGASIMMGLLKFDG
                     SQTLSMVKWSEIVRIAVSWVISPLLGGLVAYIIYSYIDKKILKPSEKLGEELKNLKKE
                     RKKFKENYFLNLKTKSMEEQIKELSAIALEDEGQENSFYKNQIKEFKEKEKNIDIYSV
                     LKTHMPIIACIGAAIIAAMFLFKGLNNVSTLDILQNFWIIGIVGTISYVVTFAIVKIV
                     KKTELNKTTDRLFAWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINANSPV
                     PFAALAMFGVALVIGLWFLGKEVITTVGSKLASIRPTTGFSAELGASIVILLATQFGI
                     PVSSTHILIGAVLGIGVYNKNANWMMMKPIGLAWIITLPAAGIMAALVFLGFKLSLGL
                     "
     gene            complement(1602..2783)
                     /locus_tag="R8X70_000409"
     CDS             complement(1602..2783)
                     /locus_tag="R8X70_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEF2928221.1"
                     /translation="MLIKNAKIYGENLQDLLIKDAKIVKIGANLDDNDEVLDAQGMTL
                     LPSFVDLCVNLKNDKFSLSNLELLEKECLRGGVGAIILRDCMDFDEESFSLFLQNLKT
                     RKIQIFPSICALDKQGKLKNLATLFNKGAHALELKSSSNANILRVGMQYTLMKEKSIF
                     VKCHDENFDDNGVMNDCETGFELGLAGMSAVAESSEVAKIQEIAKFYGVKVIFDLLSL
                     KRSIELLEDENLKLISIHHLIKDDSACAGFNTAAKLNPPLRSKEDKESLKQALKQGKI
                     DFLSSLHSAKSISLKDLAFDEAAFGIHSVCEFMSLCYTFLIKEDLLTWQNLCKATSQN
                     PSEFLGLNSGIIEVGKEANLVLFDQNEEISAPKSSLYANDKLFGKVKLHLVKGEKIIL
                     N"
     gene            complement(2792..3691)
                     /locus_tag="R8X70_000410"
     CDS             complement(2792..3691)
                     /locus_tag="R8X70_000410"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEF2928222.1"
                     /translation="MSKIAIIGAGKWGSALYSALSINNTCFMTSRTQRDLPYFVSLEQ
                     ALNCEYLVFALSSQGIYSWLKQNFVNKGQKILIASKGIDTSTCKFLDEIFSEFIDRDK
                     LCVLSGPSFAAEVMQNLPCALVVSGIKEELCKKFASFFPDFIKVYTDDDVRGAEICGA
                     YKNVLAIASGISDGLGLGNNARASLISRGLIEMHRFGKFFGAKEETFLGLGGAGDLFL
                     TATSVLSRNYRVGLALAKEKKLDDILQELGEVAEGVKTAYAIAKISKDKAIYTPIVNE
                     IVQILQGKNVKQAVQNLLKTKDN"
     gene            complement(3691..5109)
                     /gene="gatB"
                     /locus_tag="R8X70_000411"
     CDS             complement(3691..5109)
                     /gene="gatB"
                     /locus_tag="R8X70_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEF2928223.1"
                     /translation="MFEVVIGLEVHTQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFININGENKRIGITRAHLEEDAGKNIHENNYSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPD
                     LLPVLLKDEFLDTQIPELPDEKKMRYINELGIKESDAEVLIGSLELSRFFESLIALNL
                     NPKLCVNWLNTELMGLLKGELTIENSPVDAIKLGTLIKRIEEGVISAKAAKDVLAHVF
                     ENPDMDIDETIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQT
                     MKEGKGAFNPNKVNEILKAKLG"
     gene            5224..5718
                     /gene="luxS"
                     /locus_tag="R8X70_000412"
     CDS             5224..5718
                     /gene="luxS"
                     /locus_tag="R8X70_000412"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEF2928224.1"
                     /translation="MPLLDSFKVDHTKMPAPAVRLAKTMKTPKGDDISVFDLRFCIPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSDLVEIIDISPMGCRTGFYMSLIGTPDEKSVAK
                     AWEASMKDILNVSDQSQIPELNIYQCGTCAMHSLDEAKEIAQKVLNSTIGVMNNEELK
                     LENI"
     gene            6034..7026
                     /locus_tag="R8X70_000413"
     CDS             6034..7026
                     /locus_tag="R8X70_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
                     /protein_id="HEF2928225.1"
                     /translation="MNLPVLDLKIYEKDKSAFLKNLREVTSNVGFFYLINHGIDKNLN
                     EKLFKLSKDFFNLPRSSKELISMVHSPQFRGYTSEGFEYTAGEKDYREQIDIGTERKA
                     LKWDLNSPLWQRLEGPNLWPDEIPELKEIFLAWHEQTRNACLKILQAFAEALDLSSNA
                     FGKLYGENSYEHCKIIHYPKISKDASQGVGPHKDGGLITFVFQEEQNGLEAFIDDQWI
                     SVPPLEGSVVVNIGEFLELATNGYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFP
                     LNPELVQESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVARIYHSDLIEKFSFA"
     gene            7040..7810
                     /locus_tag="R8X70_000414"
     CDS             7040..7810
                     /locus_tag="R8X70_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEF2928226.1"
                     /translation="MTIFAKAFCIATLFTGFAWANEELKVGSSVVPHADILKFIKPTL
                     QKQGYDLKIYEFNDGVIPNIMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKHKEFQPKTGASISIPNNPTNESRALRIVASAGLIEIKDSELVTPLDIVKN
                     PKNLKFVELKDAQLTRSLDDVDYSLINSNFAILSGLNPIKDGLYTENKYSEYGNIIAV
                     KAGNEELDKIKALVKALQSDEVKNFIEEKYQGALIPTF"
     gene            7833..10097
                     /gene="metE"
                     /locus_tag="R8X70_000415"
     CDS             7833..10097
                     /gene="metE"
                     /locus_tag="R8X70_000415"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEF2928227.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKAQSSKEELLETAKNLRAR
                     HWKDIQNAGIDFIPSNDFSLYDNVLDAAVLFNITPKRYKDLNLDPLDEYFAQSRGYQG
                     KNGDTIALAMKKWFNTNYHYLVPECDDASIIALSGDKIFKEYLEAKELGIETKPVLVG
                     IFTLFKLIAFKDENTKQLAKDKLLQAYIELLKKLNSLGVAWLELDEPYLVYDLNQEDI
                     ALFEEFYKELLKHKGEVKILLQSYFGDLRDIYTKLLESDFDALGLDFVEGKESLNLIQ
                     KHGFANDKILFAGIVNGKNIYANDYAKSLKLIKEFQKYTQNIVINTSCSLLHVPYSTE
                     FETKLDSSYLKLFSFAKEKLKELQDLKAIINSNEENPLFKANQELFKNIPNRLDEKVK
                     ARLQTLKKEDFVRKPEFKERIQIQKEFLELPVLPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSKKIVKGMLTGPVTILNWSFPRED
                     ISLKESTEQIALALRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPA
                     FNLVHSGVKTKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLNLLDTLKAVNF
                     QTEVGPGVYDIHSPRVPSVEEISSTIEKILNKLPKEQIWINPDCGLKTRGYEEVVAAL
                     KNLVIATQKIREKL"
     gene            10107..10955
                     /gene="metF"
                     /locus_tag="R8X70_000416"
     CDS             10107..10955
                     /gene="metF"
                     /locus_tag="R8X70_000416"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEF2928228.1"
                     /translation="MCSFSFEIFPPRRDENIKNLNAILDDLGQLSPNFISVTFGAGGS
                     INSKNTLETASLIQEEYKIPSIVHLPCIHSSKEKIISILQECKERQLDKILALRGDVC
                     NDLEKSKDFSYASDLISFIRKQGEFEIYAACYPEKHNESRNFIEDIHHLKNKVDAGTD
                     KLITQLFYDNEDFYTFKQNCALAGINIPIYAGIMPITNKRQVLKISQLCGAKIPPKFA
                     KILEKYENNTLALEDAGIAYAIDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAVKYLL
                     KEELHA"
     gene            complement(10965..11165)
                     /locus_tag="R8X70_000417"
     CDS             complement(10965..11165)
                     /locus_tag="R8X70_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928229.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFFKFHSFLYFFLGLLPGLLLS
                     LVFVCLIENYELKLKINQDKSK"
     gene            complement(11162..11842)
                     /locus_tag="R8X70_000418"
     CDS             complement(11162..11842)
                     /locus_tag="R8X70_000418"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEF2928230.1"
                     /translation="MKDLFLFSSLLDSSHTFSYFFHLGLVALIAVICASMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGDEKGARKYLPLVATLGIIVFFSNIIGIIPGFHAP
                     TASLNLTLSLAIIVFVYYHFEGIRTQGFIKYFAHFMGPIKFLAPLMFPIEVVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATIVEEGH"
     gene            complement(11994..13334)
                     /gene="radA"
                     /locus_tag="R8X70_000419"
     CDS             complement(11994..13334)
                     /gene="radA"
                     /locus_tag="R8X70_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEF2928231.1"
                     /translation="MAKNKILFECQACGNQQSKWLGKCPECGSWDSFIELKSEQIKVL
                     KEIAQASTKASEAICIEDVELEHFSRCSTDDDELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKKNKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKNYEILIIDSIQTLYSNKIASAAGSITQVRDITFELMRVSKTYNISTFIIGHITK
                     EGAIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTSEVGIFEMTPKGLISAK
                     DLANRFFTRGKATSGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFVNISGGVRVNETAADLAVVAAIISSFKNRPLSKDCVFIGEL
                     SLNGEIREVFSLDTRLKEAKMQKFKNAIIPSKPLEDVGLKCFVAKELAQVLEWM"
     gene            13470..14321
                     /locus_tag="R8X70_000420"
     CDS             13470..14321
                     /locus_tag="R8X70_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEF2928232.1"
                     /translation="MQKLLKVALIQFAPKSYEVQNNLDKALKLAHLALEQGARLIVLP
                     ELYDSAYCVEDQDEKFSLNLHQAHPNLDALQKLAKNYQAYIVACSIEKDTQLYDSAYI
                     ISHKGLLGVYRKIYLWGNEKERFARGDKYPIFELEFENFKLKLGLQICYEIGFSEGSR
                     FLALQGAEIICFPSAFGKARTYVWNLASRSRALENGVFVLAANRSGSEISKINNETLT
                     FAGKSKIINPKGEIIKEILEEEGFIIAELDLEEVQIQRKNLPYLKDLNLKLNQEILTN
                     IHLNTKE"
     gene            14324..15205
                     /locus_tag="R8X70_000421"
     CDS             14324..15205
                     /locus_tag="R8X70_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEF2928233.1"
                     /translation="MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIP
                     RLLKLFKKYNIPATWFAPGHSIETFPEQMKMIVDAGHEIGAHGYSHENPIAMSAKQEE
                     DVLLKSIELIEKISGKKPSGYVAPWWEFSNITNELLLKHGIKYDHSLMHNDFTPYYVR
                     VGDKWTKIDYSKDAKEWMKPLVRGQETDLIEIPANWYLDDLPPMMFIKKSPNSFGFVS
                     PRDIGQMWIDQFDWVYREMDYAIFPMTIHPDVSARPQVLLMHERIIEHINKHEGVKWV
                     NLNDMADDFSKRFPRKK"
     gene            15247..15582
                     /locus_tag="R8X70_000422"
     CDS             15247..15582
                     /locus_tag="R8X70_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928234.1"
                     /translation="MCILCGEMISTLHWSELNFKEEKHELSVGEEQKERLRIRLKKVK
                     ILNEILEFYGLKLKEWQNSKYILSNKKGRDIIVNDLGDLWIKASELEKKSFDVLDENL
                     LHFLRAKHG"
     gene            15575..16519
                     /locus_tag="R8X70_000423"
     CDS             15575..16519
                     /locus_tag="R8X70_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEF2928235.1"
                     /translation="MAKIPVHVVTGFLGSGKTTFLKEILTNQALNDIALVINELGEVS
                     LDHKLVQTDFIEEQTLFLNAGCACCNKREDLQKKFKELLDNFENKGKKPQRVILETSG
                     LANPTPIIFTFQSDVFLANHFELANIITCIDAFEGLNHLQNEEACNQILSSDFLILTK
                     KDLNPHTQSLEEKINTLYPNIQIISKENFNLDMLSSHHKIQREIKNIEIKSHKDDISS
                     ITLIFDKAINWNIFSIWLSMLLHEHGSKILRVKGLINTEESYLTNINGVGHLIYHPTH
                     TKISSLNHPSQLVFIAKNLKLDKIKESLENFLRLEQLN"
     gene            complement(16516..17382)
                     /gene="ftsY"
                     /locus_tag="R8X70_000424"
     CDS             complement(16516..17382)
                     /gene="ftsY"
                     /locus_tag="R8X70_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEF2928236.1"
                     /translation="MFDFFKKGLAKTLESIVGVKGENKKITKDLLEEILLEADVAYEI
                     VEEIIYYLPPSDEVKKEDLKRVMGSYFLYENKEFLDEKPFVELILGVNGAGKTTSIAK
                     LANLYKSQGQKVILGACDTFRAGAIEQLRLWSEKVGVDIVLTQQGHDPSAVAFDTISK
                     ARAKGFDKVIIDTAGRLQNQKNLANELEKIVRISAKAMPHAPHRKILVLDGTQGNAGI
                     LQAKAFNELVQLDGVIITKLDGTAKGGALFSIARELELPILYIGVGEKMQDLIEFNAQ
                     NFLDTLLEGVFD"
     gene            complement(17382..17939)
                     /locus_tag="R8X70_000425"
     CDS             complement(17382..17939)
                     /locus_tag="R8X70_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEF2928237.1"
                     /translation="MKIKKVFTLAILLSFFVACSNDKEKDQSDMNASVQSSLSQSENL
                     RFNLNLIDGNSIFIKKDNENLNFADGDKATLFVFFTTWCSPCIAEIPHLNKLQEKYEE
                     QFNIVGVLLEDKSDEELRAFAQKNQILYKIANGENNYLLAKILGGVNGIPTMFLYDKN
                     SQLINQYLGLIPEEMLEIDIQKAIL"
     gene            18020..18646
                     /locus_tag="R8X70_000426"
     CDS             18020..18646
                     /locus_tag="R8X70_000426"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEF2928238.1"
                     /translation="MQKTSFRTLQKNRLAQHKKLKFKQDFIVFKECFNLIKKTKAKNI
                     LIFIPLGYEPNLLKFRHIFSKNHKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPMDSF
                     LKTKIDIAIIPVIGVDRELKRIGHGQGFYDRFFENLNYKPLVIFAQSINAISEKKLTQ
                     EHDIAGEFYINPYKKYYKKDNKYDRITYRTYNRYSRSWNRIFSCKKNQ"
     gene            18567..20120
                     /gene="rny"
                     /locus_tag="R8X70_000427"
     CDS             18567..20120
                     /gene="rny"
                     /locus_tag="R8X70_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEF2928239.1"
                     /translation="MIESLIALITAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEDKTHKIQKEFNQKFDELSKKEQKLQLQEESL
                     KENQEELLRSKKQMLDLQSDADKLKKQYQTKLNDVLNILEHSAGLTQDEAKNIILEKV
                     EENSRNEIAHIVRRYEEEARNEAKRKANYIIAQATSRFAGEFAAERLINVVNIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDNAILEEGETILMDLGLSKVHPEITKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLRRVSELEEIAK
                     SKEGIKNAYAINAGREIRVIANAKLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRAIEYAK"
     gene            20131..20688
                     /locus_tag="R8X70_000428"
     CDS             20131..20688
                     /locus_tag="R8X70_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEF2928240.1"
                     /translation="MQDMIDTLLKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLAL
                     CISIAFVANTLGSTLLFILGKYYKKDIMPYFKNHRRKLALAMMKTKQHGVVLLITQKF
                     VYGLKTFIPIAAGIAKYKFINFFIINTFASLLWAVLLGYSAYAFGFAIEAIFNKLSSY
                     PYIAPLFLIVLVGIIWFYLTKFSKK"
     gene            20688..21947
                     /locus_tag="R8X70_000429"
     CDS             20688..21947
                     /locus_tag="R8X70_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEF2928241.1"
                     /translation="MSFWNSLYLNLKEFRYLFLFGFIVFVFNIFLEYNHFLNLKEKKH
                     YLVENALLLQYYPKHNKNNKKYWVLKLKTKDFILYTTSFKDLNLSKNQLLNLKIITNN
                     ISFKDYLGKSFYAPSYGFEVLGYLKNNTLISYFLNQHTNEKIQEFYGALFFALPISSE
                     LRNDVNHYGVAHLIAISGYHIGLLFTLVFFILAPLYSFFQKRYFPYRSLRFDLSIFIF
                     ILLFAYAYLIGFVPSYVRSLIMALWGFYLLCKNIKILSFFTLFISIYLCIVLYPRLLL
                     SIGFFFSCLGVFYIFLYLHHFSKLFNNFLNIILVNIWTFFCMITPVLYFFPLISYQQF
                     LAIILSGIFIVFYPLVLCLHFIAHGNLLDPVLIDFFNLKFYALNIKIPTWALISYLIL
                     SFIAMRYKILALFCIFANFIPFIMIMI"
     gene            complement(21891..22697)
                     /locus_tag="R8X70_000430"
     CDS             complement(21891..22697)
                     /locus_tag="R8X70_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEF2928242.1"
                     /translation="MKRIFAILSNLRDKEILNYAAALSFYTILSLIPILFVCFSVFTQ
                     ISSFKAYYEKAKQIIFAFLIPAQQDIVAAYLDTFLNNSVNLGIVGLIAMTFTSLAFFS
                     GYDFVINRITKSEPKGLWQSISSYWTLLTLVPLGLGLSFYISGLIQKALDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSIQKGTLKSLIFVSFAAGAIWYIGKNLFVYYIVYNKTYA
                     SVYGSFSTILFFFIWIYISWIVYLFGIKIYYFLNHNHDKGDKIRKNTKKS"
     gene            complement(22709..24091)
                     /locus_tag="R8X70_000431"
     CDS             complement(22709..24091)
                     /locus_tag="R8X70_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEF2928243.1"
                     /translation="MKKEFEQYFIKLLGSENAYFDDIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDISKILKFCNENNIIIIPRGAGSGFTGGALAVNGGLILSFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQREVAKHGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLPNGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIALPKF
                     KKTAFGIFPSVKSAMNAVYKSLASGVNPVSMEFLDNLSIRAVESKFNKGLPVDAGAIL
                     IADVDGNVKEAIDEDLKILGEHFLDAGASQFKIAKDEQEAADIWFARRNCSQSIAMYG
                     TLKLNEDITVPRSKLPALLEGIDEISKKYGFKIPCFGHTGDGNVHTNIMVPDKNDEEQ
                     VKKGYEAVEEVFKLTVELGGTLSGEHGIGLSKAPFMKLAFSDAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            complement(24088..24780)
                     /locus_tag="R8X70_000432"
     CDS             complement(24088..24780)
                     /locus_tag="R8X70_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004275962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HEF2928244.1"
                     /translation="MSLFAIDLNLKPVKMELLKVEDIYGYVEDSPDIKLNSSGVVIQR
                     FQTSKSIIARASVIAKEKGLAKLKFSVFADLEQDALPLPNVVPQKGDEVVLNFLYDRG
                     LVIAPDEQTYNELVFSFPEIYFTHIDMLGAQLIRSSSLAPKRSDFRKFCADNAVGILI
                     FALEDKAKIVDCQDFSELYELTISKPSSIQVPFYSRIGGYKSNFFDFNSQEVGNYYRY
                     YDALINIPKVSQ"
     gene            24940..26100
                     /locus_tag="R8X70_000433"
     CDS             24940..26100
                     /locus_tag="R8X70_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEF2928245.1"
                     /translation="MKKLLLLFAFVIQSFAALSVEELTWDNGDTLLKFLQRNSIPISL
                     YYGLDREDQELASDIAYKVKYQVLKDENNNIEQVLIPISDDLQIHIYKDKNNQYTLAF
                     SPISYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRSFRGSVNFRNIQKGDKVTL
                     YYEQKRRMGKLWGDIAIKMAVVEINKNAQEVFAFNDIFYNRDGKEVEAFLLTKPVNYT
                     RISSTFSTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGTITFVGTKGGYGNVIQVK
                     HDSGYMTLYAHLSRFAKIKKGQKVNQGQLIGYVGSTGMSTGPHLHFGVYLNNKAINPA
                     SVVKIAKSELSGKAKEEFKSTIVKYEGIINEALAANKPNPPKEEDFENYIEF"
     gene            complement(26097..26303)
                     /locus_tag="R8X70_000434"
     CDS             complement(26097..26303)
                     /locus_tag="R8X70_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928246.1"
                     /translation="MYEKKDLRVLKIIQKAREFGDGDLLNEALVNQLVNAEFKEIESK
                     EREELIALLNSLIEAKDKALLSNP"
     gene            complement(26308..26988)
                     /locus_tag="R8X70_000435"
     CDS             complement(26308..26988)
                     /locus_tag="R8X70_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HEF2928247.1"
                     /translation="MGRSGENCLSLLKNQKVSVFCAYDKDYNIFRAKVHKENLFSHLG
                     FKDIEKCVFMDQIHSNKVEIYDENLKNLSCDGLISIEKNTALCVLSADCLPLILWHES
                     GIIAALHSGRKGSFENILKECVDKIYTKNPNLDMQKFHLFILPSICAKNYEIDGEILE
                     FARVEFKDFLDERKLDLKALVKFQAQNLGIKNIIDSNICSFDDKTFYSYRRDKTLKRF
                     VSVVYLKG"
     gene            complement(26952..27563)
                     /gene="ribE"
                     /locus_tag="R8X70_000436"
     CDS             complement(26952..27563)
                     /gene="ribE"
                     /locus_tag="R8X70_000436"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEF2928248.1"
                     /translation="MFNGLIREIAKVKSYQNNVLNLKANYRPNLGDSVAVNGACLSVT
                     KLHSDGFELELSHESRKHIAVQNLKDKVHIEPALRYGDRIDGHLMQGHIDFIGRLEKI
                     EKDENGVDFYIALPKEAMKFMARKGSIGIDGVSLTINEIIENGVRLTIIPITFKETLF
                     KEYEIGREINIESDLLARYIYAQMQDKDKGLSWEEVERIAYLY"
     gene            complement(27573..30113)
                     /locus_tag="R8X70_000437"
     CDS             complement(27573..30113)
                     /locus_tag="R8X70_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928249.1"
                     /translation="MKKIFYGVAAFIVVLLIALYTLLFTSLGNNIVANFIQDKIKQST
                     GLDANITQFVLCFSSLDIEANLANMADLKLEGNLSLFKLGFDLDYIISLDKNYAKNLG
                     LNLNQNLAFLGKINGKSSDFMIDGKGYLFGSNVLLDARVYNYSPIALNLSANDLQISE
                     LLALFGRGNLAKGTIDIASKISAKDLKPDGNAIIKLDNTYINYAEIKKEFNIDLPENS
                     NLKAEILANIKDDTVYTVSKIYNSYLTLQTQKTLYNLIQNTLNTDFDLSVPNLAKLEK
                     LTKTKLNGSLGVKGDASVANNALTGLNANVIGLGGEVKANLKNNQLNLNASNASLEKI
                     LALIGYGGIVSGNLNANLVSEGLDFANFNADVKINNAKLNSAEIKKIAKLDLPNTNFS
                     LDAKAKAKNGNISYNALLASNLLNIKKLDGTYNLKNAELNTDLNAFIDDLSQFNAIAG
                     QKLQGKAELNAKAHIIGAQIQNLNANANIAGGLIKANSNGKKLDLDINKLDLSKVFTI
                     VGMPNYASGIVNASARLDDINFNNLNGKINAEAKGILNAVVLSQIMDKKFPSNTNYDL
                     NIKADLKNNIADFEGVLNSSLANLSNFKGKFDINKMVLNSDYVLDIADFSKLGFLLDR
                     KLKGKASFNGKIGFDKTLNFTALSKNLFEGKLDSTLKNNILNAKLEGVDLSTLASGLD
                     FIDIYQGKANLDAKYNLISEQGEVNADMKEGKLKPNAITAALKLITLKDITTDVFHTA
                     NAKALINKENIKLDLNMQADRSYVLVSSGMLNSKSGSLNLPFDIKIDRANFKGNITGT
                     TQKPQVKLEAGSVVNSIKNIVGDKAQDGVQKAGEKVDEGINKLLNKIF"
     gene            30276..30536
                     /gene="groES"
                     /locus_tag="R8X70_000438"
     CDS             30276..30536
                     /gene="groES"
                     /locus_tag="R8X70_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEF2928250.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEIVAVS
                     KEITDIANGDKIVFAKYGGTEIKIDNSEYLVLNLDDILGILK"
     gene            30558..32195
                     /gene="groL"
                     /locus_tag="R8X70_000439"
     CDS             30558..32195
                     /gene="groL"
                     /locus_tag="R8X70_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEF2928251.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APTITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSNPY
                     ILLFDKKIANLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKANIDARVNQIKAQIAETSSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKINLDLKGDEAIGAAIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPAMPDMSGMGGMGGMGGMM"
     gene            complement(32231..32473)
                     /locus_tag="R8X70_000440"
     CDS             complement(32231..32473)
                     /locus_tag="R8X70_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:pantothenate symporter"
                     /protein_id="HEF2928252.1"
                     /translation="MSLTHNDLSNLCILISLLFLEYILINAKTFRQMTRFANFYGVIM
                     VLSFIVSWQIFNAYFNFLVFLILFFVSYKIWQFKKK"
     gene            complement(32464..32685)
                     /locus_tag="R8X70_000441"
     CDS             complement(32464..32685)
                     /locus_tag="R8X70_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928253.1"
                     /translation="MNHEKSLIYLIALCLSYTAMQAVCKYAEEQREDRAVPIAALIRL
                     GMGYGISYANAPGVGEQTYIGRPPFGGCH"
BASE COUNT        11629 a         5547 c         4917 g        10601 t
ORIGIN      
        1 agaataagag ctctaaaatt tgcaaattca ggattataag ggtataatta aagttaaaaa
       61 aggcttaact ttatgcaaaa agataatctt atcgcattta tcatctttac cattagcgta
      121 atcgcattta tcatttgggg atttggctat atctcccagc accaactcat actctttata
      181 ctcgcttcca tttttggcat atttatggca tttaacatag gcggaaatga tgtagcaaat
      241 tcttttggta ctagtgtggg agctaaaacc gtaaccataa aacaagcttt gatcatagca
      301 gctgtttttg aactcagcgg tgctattttt gcaggggctg aagtaaccaa aactatacgc
      361 agtggaatag ttatatttcc tgaacaattt gatcctatgc tttttgttgc tatcatgcta
      421 gccgctcttt taagctcggg tgtttggatt tttatcgcca caaaaaaagg cttgcctgta
      481 tctactacac atagtatcat tggtggtata gtcggagcta gtatcatgat ggggctttta
      541 aaatttgatg gatcacaaac cttatccatg gttaaatgga gcgaaatagt aaggattgct
      601 gtatcttggg tgatttcacc tcttttagga ggacttgtag cttatatcat ctactcttat
      661 atagataaaa aaatactcaa accctcagag aaacttggcg aagaattaaa aaatttaaaa
      721 aaagaaagaa agaaatttaa agaaaattat tttttaaatc ttaaaactaa aagtatggaa
      781 gagcaaatca aagaactctc agccatagcc ttagaggatg aaggacaaga aaatagcttc
      841 tataaaaatc aaatcaaaga atttaaagaa aaagaaaaaa atatagatat ttattctgtt
      901 ttaaaaacac atatgcctat tatcgcttgc attggagctg ctataattgc tgctatgttt
      961 ttatttaaag gtttaaataa tgttagcact ttagatattt tgcaaaattt ttggattata
     1021 ggaattgtag gaaccataag ctatgttgta acctttgcca tagtaaagat tgttaaaaaa
     1081 accgaattaa acaaaacgac cgatagactt tttgcttggt ttcaaatttt taccgcttct
     1141 agttttgctt tctctcatgg ggctaatgat atagctaatg ctattggccc ttttgctgcg
     1201 attttagatg ttcttaaaaa cggtactatc aatgcaaatt ctcccgtacc ttttgctgct
     1261 ctagctatgt ttggggtcgc tttggttata ggactttggt ttttaggaaa agaagtaatt
     1321 accactgtgg gttctaagct agcttctata cgccctacca caggatttag cgcagaactt
     1381 ggagcaagta tagtcatact tttagcaact caatttggaa ttccagtaag ctcaacacat
     1441 attttaatcg gtgcagtttt gggtataggg gtatataata aaaatgcaaa ttggatgatg
     1501 atgaaaccta taggtttagc ttggattatt actttgccag ccgctgggat aatggcagca
     1561 cttgtattcc taggatttaa attaagctta ggactttaag cttaatttaa aattattttt
     1621 tcacccttta caagatgtaa tttaaccttt ccaaaaagtt tgtcatttgc ataaagtgag
     1681 ctttttggag cagaaatttc ttcgttttga tcaaaaagaa ccaaattcgc ttccttacca
     1741 acttctataa ttccactatt taaacctaaa aattcacttg gattttggct tgttgctttg
     1801 caaagatttt gccaagttag aagatcttct ttgataagaa aagtataaca aaggctcata
     1861 aattcacata cactatgaat accaaaagcc gcctcatcaa aagctagatc ttttaaagaa
     1921 atagactttg cgctatgtaa agaacttaag aagtctatct ttccttgttt taaagcttgt
     1981 ttcaaacttt ctttatcttc tttgcttctt aaaggagggt tgagttttgc tgctgtatta
     2041 aatccagcac atgcactatc atctttgatt aaatgatgta tgctgataag ttttaaattt
     2101 tcatcctcta aaagctctat agaacgctta agactgagta gatcaaaaat cactttaaca
     2161 ccataaaatt tagctatttc ttgaatcttt gctacttcac tactttcagc tactgcgctc
     2221 atgcctgcaa gacctaattc aaaacctgtc tcacaatcat tcatcacgcc attatcatca
     2281 aaattctcat catgacattt tacaaaaata cttttttctt tcattaaagt atattgcata
     2341 cctacacgca aaatatttgc attactcgaa ctcttaagtt ctagagcatg tgcacctttg
     2401 ttaaaaagcg tagctaaatt cttaagcttg ccttgtttgt ctaaagcaca aatacttgga
     2461 aaaatttgaa tctttctagt ttttaaattc tgcaaaaaaa gcgaaaagct ttcttcatca
     2521 aaatccatgc aatcacgcaa gattatagca ccaacccctc ctcttaaaca ctccttttct
     2581 aaaagttcta gattgcttag ggagaattta tcatttttta aattgacgca caaatctaca
     2641 aaagatggca ataaagtcat tccttgagca tccaatactt catcattatc gtctaaattt
     2701 gcgcctattt ttactatctt tgcatcttta attaaaagat cttgtaaatt ttcaccataa
     2761 attttagcat ttttaatcag cattgaaact cctaattatc ctttgttttt aataaatttt
     2821 gtactgcttg tttaacattt tttccttgca agatctgtac tatttcattt acaataggtg
     2881 tataaattgc tttatctttt gaaatctttg ctatagcata ggctgttttt accccctctg
     2941 ccacctcacc taattcctgt aaaatatcat cgagtttttt ttcttttgcc aaagccaaac
     3001 ccacgcgata atttcttgac agtacactag ttgcagttaa aaataaatct cctgcgcccc
     3061 caagccccaa gaaagtttct tccttagctc caaaaaattt accaaaacga tgcatttcaa
     3121 taagacctct agaaatcaaa gaagcccttg cattatttcc aagtcctaaa ccatcgctta
     3181 taccgctagc aatggctaaa acatttttat aagcgccaca aatttcagca ccgcgcacat
     3241 catcatctgt atatacttta ataaaatctg gaaaaaaact tgcaaatttt ttacataatt
     3301 cttcttttat cccacttaca actaaagcac aaggaagatt ttgcattact tcggctgcaa
     3361 aagaaggacc gcttaaaaca catagcttat ctctatctat aaattcgcta aaaatttcat
     3421 ctaaaaactt acaagttgaa gtatctatac ccttagaagc gataagaatt ttttgaccct
     3481 tgttaacaaa attttgttta agccaagaat aaattccttg agagcttaaa gcaaaaacca
     3541 aatattcaca attcaaagcc tgctctaaac tcacaaaata aggcaaatct cgctgtgtgc
     3601 gagaagtcat aaaacaagta ttattaatac ttaaagcact atataaagca ctgccccatt
     3661 ttcctgcgcc gatgattgca attttgctca tcagcccaac tttgctttta aaatttcatt
     3721 gaccttgtta ggattaaagg ctcccttacc ttctttcata gtctgcccta caaagaaacc
     3781 aaagagctta tccttcccgc ttttatactc tgcaacctta tcagcattgg catttaaaat
     3841 ttgctcaatt actgcttcga tagctgaatc atcgctaacc tgcttaagcc ctaacttttc
     3901 aatcgtttca tcaatatcca tatctggatt ttcaaaaaca tgagctaaaa catcctttgc
     3961 tgcttttgca ctgatcacac cctcttctat gcgtttgatt aaggtaccaa gtttgatcgc
     4021 atctactggg gaattttcta tcgttaattc cccttttaaa agtcccataa gctcagtatt
     4081 taaccaattt acacaaagct taggatttaa atttaaagca atcaaacttt caaaaaaacg
     4141 acttaattca agcgatccta taagcacctc tgcatcgctt tctttaatac caagttcatt
     4201 tatatagcgc atttttttct catcaggaag ctcaggaatt tgagtatcta aaaattcatc
     4261 ttttagtaaa acaggcaaca aatcaggatc tggaaaatag cgatattctg ccgcttcttc
     4321 tttaccacgc atacttcttg taactaaatt tgttgtatca aaaagtctgg tttcttgaac
     4381 tacttcttgt tcgtaagttc catcttccca agcctcactt tgtcttttta cctcatattc
     4441 tatagctttt tggataaaac ggaaagaatt aagattttta atctctactc tagtgtaaag
     4501 cttagtatcg ccctttggtc ttatacttac attagcatca catctaaaac ttccctcttg
     4561 catatttgca tcagaaatat ctaaaaaacg tatgatagaa tgaagttttt taagatacgc
     4621 cactgcttca tcactgcttc taagttcagg ttcgcttaca atttcaagca aaggagttcc
     4681 tgcgcggttt aaatctactt tagaataatt attttcgtgg atatttttac ccgcatcttc
     4741 ttctaaatgc gctcttgtaa tacctatgcg tttattttca ccatttatat tgataaaaag
     4801 ctcacctttt tctactatag gaatatcaaa ttgtgaaatt tgataagctt tgggcaaatc
     4861 tggataaaaa taattttttc tattaaaaac actttttttg tttatagtgg catttaccgc
     4921 tttcccaaaa gcgatggcct tttttaccgc ttcttcattt aaaacaggta aagcacccgg
     4981 taaagccaaa caagtgggac aaacatttgt atttggagct tctccaaaag aagttgcgca
     5041 tgagcaaaat atttttgttt tggtgtttag ttgagtatgt acttcaagtc ctataactac
     5101 ttcaaacatt gattttcctt gaattttaat gctttatttt atcctttttt cttttagaaa
     5161 ggctttaaat attattttta aatgttataa tctataaaat aatttatata caaaggagtt
     5221 aaaatgccat tacttgatag ttttaaagta gatcatacca aaatgccagc acccgctgtg
     5281 cgtttagcta aaacaatgaa gacaccaaaa ggcgatgata ttagcgtatt tgacttgcgt
     5341 ttttgcatac ccaataaaga catcatgagt gaaaaaggta cgcatacact agaacactta
     5401 tttgcaggtt ttatgagaga tcatttaaat tcggatttgg ttgaaatcat cgacatttcg
     5461 cctatgggat gtcgcacagg tttttatatg agtttaattg gcacacctga tgaaaaaagt
     5521 gttgctaaag cttgggaagc ctcaatgaaa gatattttaa atgtgagcga tcaaagtcaa
     5581 attcctgaac tcaatatcta tcaatgtgga acttgtgcta tgcattcttt ggatgaagca
     5641 aaagaaattg cacaaaaagt tttaaattct accataggcg taatgaacaa cgaagaatta
     5701 aaacttgaaa atatctaaaa attagtcctt aaatttctaa ggactaagct ttttttaata
     5761 tattttttta tacaatgtgc agaatttaac tttctaagga gaaaaaatga aactgatgtg
     5821 ccagatgtgt aatatctagt gcgtcctttg gctttaacat tatgtttcca aaggcccaaa
     5881 aggtggataa ggagatataa tgtgtagaaa agtcaaaaag tttatttttt tcaaaacaca
     5941 acttaaaatc ctaattttta gttaaatctt acgaaacaaa atctaaacat taagatatct
     6001 tcttatcctt aaatataatt ttaaggagag aaaatgaatt tacctgtact tgatttaaag
     6061 atttatgaaa aagacaaaag tgcctttctt aaaaatctaa gagaagttac ttcaaatgta
     6121 ggtttttttt atcttatcaa tcacggtatc gataaaaatt taaatgaaaa attatttaaa
     6181 cttagtaaag attttttcaa tcttcctaga agctctaaag aacttatttc catggtgcat
     6241 tcgcctcaat ttagaggtta tacaagcgaa ggctttgaat atactgctgg agaaaaagat
     6301 tatagagaac aaattgacat aggcacagaa agaaaagctt taaaatggga tttaaattcg
     6361 cccctatggc aaagattaga aggtccaaat ttatggcctg atgaaattcc tgaacttaaa
     6421 gaaatatttt tagcttggca cgaacaaaca agaaacgctt gtttaaaaat tttacaagca
     6481 tttgccgaag ctcttgatct gtctagcaat gcctttggca aactctatgg tgaaaattct
     6541 tatgaacatt gtaaaatcat acactatcca aaaatctcca aagatgcctc tcaaggagta
     6601 ggaccacaca aagatggtgg acttattacc tttgtttttc aagaagagca aaacggactt
     6661 gaggctttca tagacgatca atggattagt gttcctccac ttgaaggtag tgttgtggtt
     6721 aatataggag aatttttaga attagccact aatggttatc taaaagctac tatacaccga
     6781 gtaaatttaa gccctaaaga acgctttagt atagcttatt tccttggagt gcagcttgat
     6841 aaagatattc ctatttttcc attaaatcct gaacttgtcc aagaaagcaa gggcgtggat
     6901 acagatccaa aaaatccact tttaagaaat gttgctagca actattttaa aagaatgata
     6961 cgctcacatc ctgatgtagc acgcatttat cacagcgatt taatagaaaa attcagtttc
     7021 gcataaaaag gagggaataa tgactatatt tgcaaaagct ttttgcatag caactctttt
     7081 tacaggcttt gcctgggcta atgaagaact taaagtaggt tcttcagttg tcccacatgc
     7141 agacatttta aagtttatca aacctactct tcaaaagcaa ggttatgatt taaaaattta
     7201 cgaatttaat gatggggtga ttcctaatat tatggtggaa aatggcgaac ttgatgcaaa
     7261 ttattttcag catgaacctt atttgaaaga atttaatcaa agacaaggca ctcatcttgt
     7321 aaaagttgct agtattcata tcgaacctat ggcggtatat tctaaaaaac ataaagaatt
     7381 tcaacctaaa acaggggcaa gtatatcaat acctaacaat cctacaaatg aaagtcgtgc
     7441 tttacgcata gtagcaagtg cgggattaat cgagattaaa gatagcgaac ttgttacgcc
     7501 tttggatatc gtaaaaaatc ctaaaaatct taaatttgta gaattaaaag atgcccaact
     7561 tacaagaagt ttagatgatg tagattactc tcttatcaat agtaattttg caattttatc
     7621 gggcttaaat cctataaaag acgggcttta tacagaaaat aaatatagcg aatatggcaa
     7681 tatcatcgcc gttaaagcag gaaatgaaga gcttgataaa atcaaagcct tagtcaaagc
     7741 tttacaaagt gatgaagtta aaaattttat agaagaaaaa tatcagggtg ctttaatccc
     7801 tactttttaa tttaacaaca aaggagaaca atatgaaaaa ttcaatcatt tcttacccaa
     7861 gaataggtgc aaatagggaa ttaaaatttg ctattgaaaa atattttaaa gctcaaagtt
     7921 ctaaagaaga gcttttagaa actgctaaaa atttaagagc tagacattgg aaagatatcc
     7981 aaaatgcggg gattgatttc attcctagca atgatttttc gttgtatgat aatgtactag
     8041 atgcggctgt gctttttaat atcactccaa aacgctataa agatttaaat ttagatcctt
     8101 tagatgagta ttttgcacaa agtcgtggtt atcaaggaaa aaatggagat accatagctc
     8161 tagcaatgaa aaaatggttt aatacaaact atcattattt agtacctgag tgtgatgatg
     8221 caagtattat agctttaagt ggagataaaa tttttaaaga ataccttgaa gcaaaagagc
     8281 ttggcataga aacaaaacct gttttagtgg gaatttttac cctctttaaa ctcatagcct
     8341 ttaaagatga aaatactaaa caactcgcta aagacaagct tttacaagca tacattgaac
     8401 ttcttaaaaa gcttaattca ttaggggtag catggttaga acttgatgaa ccttatttag
     8461 tttatgattt aaatcaagaa gatattgctt tatttgaaga attttacaaa gaacttttaa
     8521 aacacaaggg agaagttaaa atcttgcttc aaagctattt tggagattta agagatattt
     8581 atactaaact tctagaaagt gattttgatg ctttggggct tgattttgta gaaggcaaag
     8641 aaagtttaaa tttaatccaa aaacatggtt ttgctaacga caaaatactt tttgcaggta
     8701 tagtaaatgg taaaaatatc tatgctaatg attacgcaaa aagcttaaaa cttatcaaag
     8761 aatttcaaaa atacactcaa aatatagtta taaatacctc gtgttcactc ttgcacgttc
     8821 cttatagcac agaatttgaa actaaattag attcaagtta tcttaaactt ttctcttttg
     8881 caaaagaaaa acttaaagaa ttacaagact taaaagctat cataaatagc aatgaagaaa
     8941 atcctctttt taaagccaat caagaactct ttaaaaatat tcctaatcgt ttagatgaaa
     9001 aagtaaaagc tagacttcaa actctaaaaa aagaagattt tgtaagaaag cctgaattta
     9061 aagagcgtat ccaaattcaa aaagaatttt tagaacttcc tgttttacca accacaacca
     9121 taggatcatt tcctcaaagt gctgatgtac gctctaatcg tcttgctttt aaacaagaaa
     9181 aaatttcagc acaaaactat actgaattca atcaacaaaa aattaaagaa tgtatccaaa
     9241 ttcaagaaga aataggactt gatgttttag tgcatgggga atttgaaaga aatgatatgg
     9301 tggaatattt tggagaaaat ttaaaaggct ttttatttac tcaaaatggc tgggttcaaa
     9361 gctatggaac aagatgcgta aaaccacctg taatttgggg cgatgtatca cgcacaaaac
     9421 ctatcactct agcatggtct aaatttgctc aaagcttgag taaaaaaatc gtaaaaggta
     9481 tgctaacagg tcctgtgact atactcaatt ggtctttccc aagagaagac atcagcctaa
     9541 aagaaagcac cgagcaaata gctttagctt taagagatga agttttagat cttgaaaatg
     9601 cgggcattaa aatcatacaa attgatgaag cggctctaag agaaaaactg cctttaagaa
     9661 aaagcgattg gcatagtgaa tatttagatt gggcgattcc tgctttcaat cttgtacata
     9721 gcggagtaaa aaccaaaaca caaattcata cccatatgtg ttatagcgaa tttagcgata
     9781 tcttaaaaga aattgatgca atggatgcag atgtaatatc ttttgaagct tcaagatcaa
     9841 atctcaatct tttagatacc ctaaaagctg ttaactttca aactgaagtt ggaccaggag
     9901 tttatgatat acatagccct agggtgccta gcgtggaaga aataagctca accatagaaa
     9961 aaattcttaa caaattgcct aaagagcaaa tttggatcaa tccagactgc ggacttaaaa
    10021 caaggggtta tgaagaagtt gtagctgctc ttaaaaattt agttattgcc acacaaaaaa
    10081 taagagagaa attataaggg ggttttatgt gtagcttttc ttttgaaatt tttccaccaa
    10141 gaagagatga aaacattaag aatcttaatg caattttaga tgatttagga caattaagtc
    10201 ctaacttcat cagtgtaact tttggtgctg gcggctctat aaattcaaaa aataccctag
    10261 aaacagcaag cttaattcaa gaagaatata aaattcctag catagtgcac ctaccttgca
    10321 ttcattctag taaggaaaaa attataagca tacttcaaga atgcaaagaa agacaacttg
    10381 ataaaattct tgctttaaga ggggatgtat gtaatgattt ggaaaaaagt aaagattttt
    10441 cttatgcaag tgatttgatc tcttttatcc gaaagcaagg agaatttgaa atttatgcgg
    10501 cttgttatcc tgaaaaacac aacgaatctc gaaattttat agaagatata caccatctta
    10561 aaaataaagt tgatgcaggc acagacaaac tcatcactca acttttctac gataatgaag
    10621 atttttacac ttttaagcaa aattgtgctt tagcgggtat taatattcct atttatgcag
    10681 gcattatgcc tattacaaac aaaagacaag tattaaaaat ttcacagctt tgcggagcta
    10741 aaattccacc taaatttgcc aaaattttag aaaaatacga aaacaatact ttagccttag
    10801 aagatgctgg aattgcttat gccatagatc aaattgtaga tttgattact agcggggtgg
    10861 atggaattca tctttatacc atgaataaat ctaaagcagc tataaaaatt tatgaagccg
    10921 taaaatattt attaaaagaa gaacttcacg cttaaaaata aaacttactt gcttttatct
    10981 tgattgattt taagttttaa ttcataattt tctataagac aaacaaaaac taaagataaa
    11041 agcaaacccg gaagaagtcc taagaaaaaa tataaaaaag aatgaaattt aaaaaagaaa
    11101 aaaagtgcgc caaaaagcat taaagctaag gacgcacctt tgaagaattc taagatataa
    11161 atcaatgacc ttcctcaact atcgttgcac ctgctagata aacataagtc aaaatcataa
    11221 aaatgaatgc ttgtaaaaat gccataaaag ttaaaagaac atatgcagga agcggtgcaa
    11281 tataaggcac aagagccaaa attaccatta agaataaatc atcacccttg atatttccaa
    11341 aaagacgaaa agataaagaa acaacgcgag aaaggtgaga tactacttcg ataggaaaca
    11401 tcaaaggagc aaggaattta ataggaccca taaaatgagc aaaatatttt ataaaacctt
    11461 gagtacgaat tccttcaaaa tgataataaa caaatacaat aatagccaaa gaaagtgtta
    11521 aatttaaact tgctgttgga gcatgaaagc ctggtataat accgatgata ttactaaaga
    11581 aaactataat tcccaaggtt gctacaagag gaagatattt tctcgcacct ttttcatctc
    11641 ccatagtgtc gcgtcccatt gacaaaacac cctctaaaaa cgcttcacct aaattttgca
    11701 taccgcgtgg aacaagttgc atagaacgag tagccattga agcacaaatg acagcaatca
    11761 aagctaccaa acctaaatga aaaaaataag aaaaagtatg acttgagtca agtaaagaac
    11821 tgaataaaaa taaatctttc ataatttcct cgctattttt ttaaactcta attatattat
    11881 catcttgctt atattttaat gaaaactaac aaaatattta ctcctaattt aataaaaaaa
    11941 tagctctaaa tttgttgatg ttaaaacaaa aaatataagg ctttatagca atatcacatc
    12001 cattctaaaa cttgggcaag ctctttggct acaaagcatt taagccctac atcttctaaa
    12061 ggtttagatg gaataatagc atttttaaat ttttgcattt tagcttcttt taaacgggta
    12121 tcaagactaa aaacttctct tatttctcca tttaaactca attcccctat aaaaacacaa
    12181 tccttactca aagggcgatt tttaaaacta gaaataatag ccgcaaccac agccaaatca
    12241 gccgcagttt catttaccct tactccaccg ctaatattta caaaaacatc ataatgacca
    12301 agaggaattt ctaattttct ttcaagtaaa gccaaaagca tatcaagacg atttttttca
    12361 tagcctgtgg cactgcgttt aggataagaa ctctcgcaca ctagagcttg cacctctaaa
    12421 accaaagcac gagaaccctc cattacaaca cctaaagcac tgcctgaagt agctttacct
    12481 cgcgtaaaaa aacgattggc taaatctttt gcactaatta aacccttagg agtcatttca
    12541 aaaattccca cctcgcttgt gccaccaaag cgatttttaa aaccccttaa aagcctgatt
    12601 tctttagttg catccccttc aaaataaagc accacatcga ccatatgctc taaaacccta
    12661 gggcctgcta tggctccttc tttggtgata tgtcctatta taaaagtgct gatattgtaa
    12721 gttttgctta ctcgcataag ttcaaaagtg atatcgcgca cttgagtgat acttccagct
    12781 gctgaagcaa ttttgtttga atataaggtt tgtatggagt cgatgataag aatttcataa
    12841 tttttcttat gcaattcttc taaaatattt tcaagacaaa gctctgtaag taaaaataaa
    12901 ttaggagtat tagcctcaag acgatcggct cttaatttaa tttgcgcctt actttcttct
    12961 ccgcttacat aaagaacttt tttatttttt ttagccaaat tagaagcaat ctttagtaaa
    13021 agtgtagatt tgccaacccc agggctaccg cctataagca ccaaagaacc ctcaacaagc
    13081 cctccaccta aaaccaaatc cagctcatca tcatcagtgc tacaccttga aaaatgctcg
    13141 agctccacat cttctataca gatagcctcg cttgcttttg tacttgcttg tgcgatttct
    13201 tttaaaactt taatttgttc agattttaat tctataaaac tatcccaaga accacactca
    13261 ggacattttc caagccattt gctttgctga tttccgcaag cttggcattc aaaaagaatt
    13321 ttatttttag ccatgatact ttctttaaag aatatttatt gcaataattt ttcacattat
    13381 aacaaaaatt aaattaaaat ttaacaaaaa gtcaaataaa attaagtttt atatgattat
    13441 aatataaata aaataaaaaa ggctagagta tgcaaaaatt actaaaagtc gccctaatcc
    13501 aatttgctcc aaaatcttac gaggttcaaa acaatctcga taaagcctta aagcttgccc
    13561 atcttgcatt agagcaaggt gctaggctga tagttttgcc tgaactttac gatagtgctt
    13621 attgcgtgga agatcaagat gaaaaattta gcttaaattt acatcaagca catcctaatc
    13681 ttgatgcatt acaaaaatta gctaaaaact atcaagctta tatcgtagca tgttctatag
    13741 aaaaagatac ccaactttat gatagtgctt acatcattag tcacaaaggt cttttaggtg
    13801 tttatagaaa aatttatctt tggggtaatg aaaaagaaag atttgcaaga ggagataaat
    13861 atcctatttt tgaactagaa tttgaaaatt ttaaactcaa attaggtttg caaatttgtt
    13921 atgaaatagg ctttagcgaa ggatctagat ttttagcgct tcaaggagct gaaatcattt
    13981 gctttccttc agcttttgga aaagcaagaa cttatgtttg gaatctagca agtagatcta
    14041 gagccttaga aaatggtgtt tttgtcttgg ctgctaaccg atctggaagt gaaatttcta
    14101 agataaataa tgaaacttta acctttgctg gaaaatcaaa aattatcaat cctaaaggag
    14161 aaattataaa agagatctta gaagaagaag gttttatcat agctgaactt gatcttgaag
    14221 aagttcaaat tcaaagaaaa aatttacctt atcttaagga tttaaatctc aaattaaatc
    14281 aagaaatatt aacaaacatc catcttaata caaaggagta aaaatggcaa aagaaattct
    14341 agttgcttat ggcgtggata ttgatgcggt agcaggatgg ctaggaagct atggaggtga
    14401 ggattctcct gatgatattt caagaggtct ttttgcgggt gaagtgggta tccctaggct
    14461 cttaaaactc tttaaaaaat ataatattcc tgcaacttgg tttgctccag gacattccat
    14521 agaaaccttt cctgaacaaa tgaaaatgat agtggatgca ggacatgaaa taggtgccca
    14581 tggatattca catgaaaatc ctattgcaat gagtgctaaa caagaagaag atgttttact
    14641 taaaagtata gaacttatag aaaaaatcag cggaaaaaaa ccaagtggat atgtggcacc
    14701 ttggtgggaa ttttcaaata tcaccaatga gctcttgctt aaacacggca tcaaatacga
    14761 ccattcttta atgcataatg acttcacacc ttattatgtg cgtgttggag acaaatggac
    14821 taaaattgat tatagtaaag atgccaaaga atggatgaag cctttggtac gcggacaaga
    14881 aacagatttg attgaaattc ctgcaaattg gtatttagac gatcttcctc ctatgatgtt
    14941 tataaaaaaa tctccaaata gctttggttt tgtctctcca agagatatag gccaaatgtg
    15001 gatagatcag tttgattggg tttatagaga aatggattat gctatttttc ctatgactat
    15061 acatcctgat gtaagcgcta gacctcaagt tttactcatg catgaaagaa ttattgaaca
    15121 tatcaataaa cacgaaggtg taaaatgggt aaatttaaac gatatggcgg atgatttttc
    15181 aaaacgcttt ccaagaaaaa aataaatttg caaggctttt agccttgtga attcaaaagg
    15241 ataaaaatgt gtattttatg tggcgaaatg ataagtactt tacattggag tgaattaaat
    15301 tttaaagaag aaaaacacga acttagcgta ggtgaagaac aaaaagaaag attaaggata
    15361 agacttaaaa aagtcaaaat tttaaatgaa attttagaat tttatggatt aaaacttaaa
    15421 gaatggcaaa attcaaaata catactaagc aataaaaaag ggcgtgatat tatcgttaat
    15481 gatttgggcg atttgtggat taaggctagc gagcttgaaa aaaaatcatt tgatgtatta
    15541 gatgaaaatc tacttcattt tttaagagct aagcatggct aaaattcccg ttcatgttgt
    15601 taccggtttt ttaggaagtg gaaaaacaac ctttttaaaa gaaatattaa ccaatcaagc
    15661 tcttaacgat atcgctcttg taatcaacga actaggggaa gtttctttag atcataaact
    15721 cgtacaaaca gattttatcg aggagcaaac tttattttta aatgcaggtt gtgcttgctg
    15781 caataaaaga gaagatttgc aaaagaaatt taaagaattg cttgacaatt ttgaaaacaa
    15841 aggtaaaaaa cctcaaagag tcatactaga aacctcaggc ttagcaaatc ctacacctat
    15901 tatctttact tttcaaagtg atgtgttttt agccaaccat tttgaattag ccaatattat
    15961 cacttgtatt gacgcttttg aagggcttaa tcacttacaa aatgaagaag cttgcaatca
    16021 aatattaagc tctgattttt taatactcac aaaaaaagat cttaatcccc atacccaaag
    16081 cttagaagaa aagataaaca ctttatatcc taatatacaa atcataagca aagaaaattt
    16141 taatttagat atgctttcta gccatcataa aattcaaaga gaaattaaaa atatagaaat
    16201 aaaaagccat aaagatgaca taagttctat aactcttatt tttgacaagg ctataaattg
    16261 gaatattttt agcatttggc ttagcatgct tttacatgaa cacggatcaa aaattctaag
    16321 agtaaaagga cttatcaata cagaggaatc ttatctaacc aacattaatg gagtaggaca
    16381 tctgatttat catcctacgc atactaaaat ttcaagcctt aatcatcctt cgcaattggt
    16441 atttatagcg aaaaatttaa agctagataa gattaaggaa tctttagaaa attttttaag
    16501 gcttgaacaa ttaaattaat caaaaacacc ctctaaaagt gtgtctaaga aattttgtgc
    16561 attaaattct atcaaatctt gcattttttc acccacccct atatacaaaa taggaagttc
    16621 taattcacgc gctatactaa aaagcgctcc accctttgct gtgccatcaa gtttagtaat
    16681 aataactcca tcaagctgaa caagttcatt aaaagcttta gcttgtaaaa tgccggcatt
    16741 gccttgagtg ccatcaagta ctaaaatttt tctatgcggg gcatgaggca tagctttagc
    16801 cgaaattcta acgattttct ctagctcatt ggctaaattt ttttgatttt gcaaacgacc
    16861 cgctgtatcg atgataacct tatcaaaacc cttagctcta gccttgctaa tagtatcaaa
    16921 agcaaccgcc gaaggatcat gaccttgttg ggttaaaact atatctaccc ctactttttc
    16981 agaccaaagt cttagctgct ctatcgcccc tgccctaaaa gtatcacaag cgcctaaaat
    17041 cactttttga ccttggcttt tgtataaatt agcaagctta gctatactcg tggttttacc
    17101 cgcgccattt acccctaaaa taagctccac aaaaggcttt tcatctaaga attctttatt
    17161 ttcgtaaaga aaataagaac ccatcacacg ctttaaatct tcttttttaa cctcatcact
    17221 gggtggtaaa taataaatga tttcttctac gatctcatac gccacatctg cttcaagtaa
    17281 aatttcctct agtaaatctt tggtaatttt tttattttca cctttaacac ccactatact
    17341 ttcaagggtt tttgcaagtc cttttttaaa aaaatcaaac attaaagtat cgccttttgt
    17401 atatcaattt ctaacatttc ttctggaatc aatcctaagt attgatttat aagctgagag
    17461 tttttatcat ataaaaacat agtaggaatt ccattaactc cgcctaaaat tttagctaaa
    17521 agataattat tttcaccatt ggctatttta tataaaatct gatttttttg agcaaaagct
    17581 ctaagctcct catcactctt atcttcaagt aaaacaccca ctatattaaa ctgctcttca
    17641 tatttttctt gaagcttatt aagatgcgga atctctgcaa tacaagggga acaccaagta
    17701 gtaaaaaaca caaacaaagt cgctttatct ccatcagcaa aatttaaatt ttcattatct
    17761 ttttttataa aaattgaatt tccgtctatt aaattgagat taaatctcaa gttctcactt
    17821 tgacttaagc ttgattgaac gcttgcattc atatcacttt gatctttttc tttatcattg
    17881 ctacaagcaa caaaaaaact caagagtata gctagtgtaa atactttttt aattttcatt
    17941 ctattatttt ccttgtatct ttgtaaaaaa tgttaaaatt atatcatagt taagataata
    18001 atttttaaaa aggcacacga tgcaaaaaac atcttttagg actttgcaaa aaaaccgtct
    18061 cgcgcaacac aaaaaactta aattcaagca agatttcata gtgtttaagg aatgttttaa
    18121 cttgattaaa aaaacaaaag cgaaaaatat tctaattttc attcctttag gatatgagcc
    18181 aaatttactc aaatttagac atatttttag taaaaatcat aaactttttg tcccatttat
    18241 gcaagataaa agtttaaaaa ttgtaaaatt aagattgcct tttattaaaa aaaggtttgg
    18301 ggtattagaa cccatggact cctttttgaa aactaaaatt gatatagcta tcatacccgt
    18361 gataggagta gatagagaat taaaaagaat aggacatggg caaggttttt atgatagatt
    18421 ttttgaaaat ttaaactata aacctcttgt aatttttgct caaagtatca atgctataag
    18481 tgaaaaaaaa ttaacccaag agcatgatat tgcgggtgaa ttttatatca acccttataa
    18541 aaaatactac aagaaagaca acaaatatga tagaatcact tatcgcactt ataaccgcta
    18601 tagtcggtct tggaatagga tatttagttg caaaaaaaat caatgatgct aaatatgaaa
    18661 tttttgttga gcaagcaaaa gcgaaagcaa aagctataga atacgaagct gaactgattt
    18721 taaaagatgc caaaaattca atccttaatg ccgaacttga agtgaaaaaa aaatacgagg
    18781 ataaaactca caaaattcaa aaagaattca atcaaaaatt tgatgaatta tccaaaaaag
    18841 agcaaaaact tcaacttcaa gaagaaagct taaaagaaaa tcaagaagaa ttattacgct
    18901 ctaaaaaaca aatgcttgat ttacaatcag atgctgacaa gcttaaaaaa caataccaaa
    18961 caaaactcaa tgatgtttta aatattttag aacattcagc agggctcact caagatgaag
    19021 caaaaaatat cattcttgaa aaagtagaag aaaactcacg caatgaaatt gctcatatcg
    19081 ttaggagata tgaagaagag gctagaaatg aggctaaaag aaaggcaaat tacatcatag
    19141 cacaagcaac ctctcgtttt gcaggagaat ttgctgctga aagacttatt aatgttgtca
    19201 acatcaaaaa cgatgagtta aaagggcgta tcataggcaa agaaggacgc aatgttaaaa
    19261 ccttagaaat ggttttagga gtagatatca tcatcgatga tacacctgga gccatcatag
    19321 taagttgctt taatctttat cgccgtgcta ttgcaactaa ggtgattgaa cttttagtag
    19381 aagatggaag aattcagcct gctcgcatag aagaaattca cgaaaaagta tgcaaagaat
    19441 ttgataatgc tattttagaa gaaggtgaaa ctatactgat ggacttaggg ctttctaagg
    19501 tccatccaga aatcaccaaa cttataggaa agcttaaata ccgcgcaagc tatggacaaa
    19561 atgctttagc acattcttta gaagtagctc atttagcagg aatcatcgct gctgagtgtg
    19621 gaggggatga aaatttagca cgacgcgcag gaattttaca cgacataggc aaagctttaa
    19681 cgcatgattt tgaaggctct catgtagact taggagcaga actttgcaaa cgctataaag
    19741 aacatcctgt ggttattaat gctatttatg ctcaccatgg acatgaagaa gctacaagca
    19801 tagaatcagc agccgtttgc gcagccgata cgctcagcgc tgcaagaccg ggtgctagac
    19861 gcgaagtctt agaagctttc ttaagaagag taagcgagct tgaagagatt gctaaaagca
    19921 aagaaggtat taaaaatgct tatgcgatta atgcgggaag agaaattcgt gtcattgcaa
    19981 atgcaaaact tgtaaatgat gatgaaagcg tgcttttagc caaagaaata gctgctgaaa
    20041 ttcaagaaaa aatgcaatac cctggagaaa tcaaggtaaa tgtcatacgc gaactaagag
    20101 ccatagaata cgccaaataa gagagctaat atgcaagata tgatagatac cttactaaaa
    20161 tacggctata tagttttatt tttctattct ttaggtggtg gaatggtagg aattttagcc
    20221 gctggagttt taagctctca aggaaaaatg gatttggctt tatgtataag catagctttt
    20281 gtggctaata ctttgggttc taccttgctt tttatacttg gaaaatacta taaaaaagat
    20341 attatgcctt attttaaaaa tcatcgccga aaacttgccc ttgctatgat gaaaaccaaa
    20401 caacatggag tcgttttgct tataactcaa aaatttgtct atggcttaaa aacttttatc
    20461 cccatagctg caggcatagc aaaatataaa tttattaatt ttttcatcat caatactttt
    20521 gctagtttac tttgggcagt gcttttagga tatagcgctt atgcatttgg ttttgccata
    20581 gaagcaattt ttaataagtt aagctcttat ccttatattg cacctttatt tttaatcgta
    20641 ttggttggaa ttatttggtt ttatttgact aaattttcta aaaaataatg tctttttgga
    20701 attctttata tctaaacctt aaagaattcc gttatttatt tttatttggc tttattgttt
    20761 ttgtttttaa tatattttta gaatataatc attttttaaa ccttaaagaa aagaaacatt
    20821 atctagtaga aaatgccttg cttttacagt attatccaaa acataataaa aacaataaaa
    20881 aatactgggt tttaaaactt aaaacaaagg attttatcct ttatactaca agctttaagg
    20941 atttaaattt aagcaaaaat cagcttttga atttaaaaat aatcacaaat aatatttcct
    21001 ttaaggatta tcttggaaaa agcttttatg ctcctagcta tggttttgaa gtattaggat
    21061 atcttaaaaa caatactctc atttcttatt ttttaaacca acatacaaat gaaaaaatac
    21121 aagaatttta cggagcttta ttttttgccc tacccatctc ctcagaactt agaaacgatg
    21181 ttaatcatta tggtgttgct catttaatag caatcagtgg ttatcatata ggtttacttt
    21241 ttactttggt attttttata ctcgcaccct tgtatagttt ttttcaaaaa agatattttc
    21301 cctatagaag cttacgcttt gatttaagca tttttatttt tatcttgctt tttgcttatg
    21361 cttatcttat aggctttgtg ccttcttatg ttcgttcttt aatcatggct ctttggggtt
    21421 tttatctgct ttgtaaaaat atcaaaattc taagcttttt tacccttttt ataagtatat
    21481 atctttgtat agtcctttat cctaggcttt tattgagtat aggatttttc ttttcttgcc
    21541 taggagtttt ttatattttt ttatatttgc accatttttc aaaattattt aacaatttct
    21601 taaatatcat cttagtgaat atatggacat ttttttgtat gattactcct gtgctttatt
    21661 tctttcctct tatcagctat cagcaattcc tagccattat tttgagtgga atttttatag
    21721 tcttttatcc tttggtttta tgtttgcatt ttatagcaca tggaaatctt ttagatcctg
    21781 tattgattga cttttttaat cttaaatttt atgctttaaa tattaaaata ccaacttggg
    21841 ctttaatatc ctatctcata ctttctttca tagctatgcg ttataaaatt ttagctcttt
    21901 tttgtatttt tgcgaatttt atccccttta tcatgattat gatttaaaaa ataataaatt
    21961 ttaatcccaa aaagataaac aatccaagaa atataaatcc aaataaagaa aaaaagtata
    22021 gtagaaaaag aaccataaac actagcataa gttttgttat aaactatata atacacaaac
    22081 aaattctttc ctatatacca aatagctccc gccgcaaaag aaacgaatat caagctttta
    22141 agagttcctt tttgaataga acttgaataa gatataaaaa acaaacccca aatgatcaca
    22201 aaaggcaaaa tttcaaaaaa attaaaacct attttataat catccaaagc tttctgaatc
    22261 aaacccgata tataaaaact aagtcctaag cctagtggga caagggttaa aagcgtccag
    22321 taagaactaa tactttgcca aagtcctttt ggctcacttt ttgtaatgcg attgattaca
    22381 aaatcatagc ctgaaaaaaa agccaaagaa gtaaaggtca ttgctataag acccactata
    22441 cccaaattta cactattatt taaaaatgtg tcaagataag cagcaactat atcttgctgt
    22501 gcaggtatta aaaaagcaaa aatgatttgc ttggcttttt cataataagc cttaaaactt
    22561 gaaatttgcg taaaaacaga aaaacacaca aacaaaattg gtatcaaaga taaaatagta
    22621 taaaaactaa gcgctgcggc ataatttaaa atttctttat ctcgcaaatt ggataaaata
    22681 gcaaaaattc tcttcaatct tttccttttt aaagccccat tttaaaagga ttgagaatat
    22741 tatttgggtc aaaagctttt ttaatatttc tcattaaatt catttcggca tcagaaaaag
    22801 ctaatttcat aaaaggagcc ttagaaagtc ctattccatg ctctccactt aaagttcctc
    22861 caagctccac agtaagctta aatacctctt ctactgcttc atagcctttt tttacttgtt
    22921 cttcatcatt tttatcagga accataatat tagtatgcac atttccatca ccagtatgac
    22981 caaaacaagg aattttaaaa ccatattttt tagaaatttc atctatacct tcaagtaaag
    23041 caggaagttt tgaccttggg acagtaatat cttcatttaa ttttaaagtc ccatacatag
    23101 ctatactttg agaacaattt cttctagcaa accaaatatc tgctgcttct tgctcatctt
    23161 tggctatttt aaactgactt gctcctgcgt ctaaaaaatg ctctcctaaa attttcaaat
    23221 cttcatcaat agcttctttt acattgccat ctacatcagc aatcaaaata gctcccgcat
    23281 ccacaggcaa acctttgtta aatttacttt ctactgctct aatgctaaga ttatctaaaa
    23341 attccataga tacaggatta accccacttg caagactctt ataaactgca ttcatagcgc
    23401 tttttacact tggaaaaatt ccaaaagctg ttttcttgaa tttaggcaag gcaataagct
    23461 ttaaggtaag ctcacttaaa accgctaaag aaccctcact cgcgattaaa atacctgcga
    23521 gattatatcc tgcaacatct ttgatggtac gtttacccgc acgaatgatt tccccattag
    23581 gcaacacagc ccttaaagcc ataacataat ctttagtaat gccatacttt gcagctctca
    23641 tacctccagc attttcactt acattgcctc ctaagctaga atactccatg ctagcaggat
    23701 cgggcggata aaaaagtcca tgcttagcca cttctctttg taaatgtata ttaatcacac
    23761 ctggttgcac tactgcgact aaattttcaa gatcgatttc tagaatttta ttcatatgtt
    23821 tttcaaagct taaaatcaaa cctccattaa cagccaaagc tcctcctgta aaacccgaac
    23881 ccgccccacg aggaatgata atgatattat tttcattaca aaattttaat attttagaaa
    23941 tatcctcctc gtttcttgga aacagcaccc catcgggcaa ataatgcttt tttgtagcat
    24001 cataactata agcacgctta tgaatatcat caaaataagc attttcacta cctagaagtt
    24061 ttataaaata ttgttcaaat tcttttttca ttggcttacc ttaggaatat taattaaagc
    24121 atcataatat ctataataat tacccacttc ttgggaatta aaatcaaaaa aattactttt
    24181 ataaccacct atacgagaat aaaaaggaac ttgtatactg cttggtttag atatggttaa
    24241 ttcataaagc tcactaaaat cttgacaatc aactatcttt gccttatcct ctaaagcaaa
    24301 aatcaaaatt cccacagcat tatcggcaca aaattttcta aaatcactac gctttggagc
    24361 aagagatgaa gagcggatga gttgtgctcc tagcatatca atatgagtaa aataaatttc
    24421 tggaaagcta aatacaagct cattataagt ttgttcatct ggagcaatca ctaaacctct
    24481 atcataaaga aaatttaaaa ccacctcatc acccttttgt ggtacaacat ttggcaaagg
    24541 caaggcatct tgctcaagat cagcaaaaac actgaatttt aattttgcca aacccttttc
    24601 tttagctata acactagctc ttgctataat gctttttgaa gtttgaaaac gctgtataac
    24661 aacaccgctt gaatttaatt ttatatcagg actatcttca acataaccat aaatatcttc
    24721 aacctttaaa agttccattt ttacaggctt taaatttaaa tctattgcaa aaagactcat
    24781 acttaagctt aaaataaatg ctagaaattt aagcaaacta actccttaaa aaatcaattt
    24841 aatgtattat aatccttttt tgttaagcaa ttgtaagaat tataaagtaa aatatagctt
    24901 ttaaaaattt aaaaatcctc gaaaaaataa ggtctttata tgaaaaaact cttactccta
    24961 tttgcatttg ttattcaaag ttttgccgca cttagcgttg aagaacttac ttgggataat
    25021 ggcgatactt tgcttaaatt cttgcaaaga aattctatcc ctatatcgct ttattatggg
    25081 cttgatagag aagatcaaga acttgcctct gatatagctt ataaagtaaa atatcaagtt
    25141 ttaaaagatg aaaataataa tatagaacaa gttttaatcc ctatcagtga tgatttacaa
    25201 attcatattt ataaagataa aaacaatcaa tacacccttg ccttttctcc tatttcttat
    25261 caaaaagaag atagaatttt acatttaaca atcaaaagtt cagcctatca agatgtttat
    25321 gaagaaagtg gtagcagtac tctagctcgt gctatggtgc gctcctttcg aggaagtgtt
    25381 aactttcgca atatccaaaa aggcgataag gttactcttt attatgagca aaaaagacgc
    25441 atgggaaaac tttgggggga tattgctata aaaatggctg tagtagaaat taacaaaaat
    25501 gcacaagaag tattcgcttt taatgatatt ttttacaatc gcgatggaaa agaagtggaa
    25561 gcttttttat taaccaaacc tgtaaattat acaagaatat catcaacttt tagtactgca
    25621 agatatcatc ctatactcaa acgctatcgt gcacaccttg gtatagacta tgcagcgcct
    25681 actggaacac ctgtaaaaag tgcaggcaaa gggacaatca cttttgtagg cactaaagga
    25741 ggatatggaa atgtcataca agtaaagcat gattcaggct atatgacttt atatgctcat
    25801 ttaagtcgtt ttgcaaaaat taagaagggc caaaaagtaa atcaaggtca actcattggt
    25861 tatgtaggtt caacaggcat gagtacaggc ccacatttac attttggtgt ttatctaaac
    25921 aataaagcca tcaatcctgc ttcagtagtt aaaatcgcta aatcagagct aagcggaaaa
    25981 gccaaagaag aatttaaaag cactatagta aaatatgaag gaattataaa cgaagcctta
    26041 gctgctaata agccaaatcc tcctaaagaa gaagattttg aaaattatat agaattttaa
    26101 ggattgctaa gcaaagcctt atctttagct tctatcaagg aattaagaag agctataagc
    26161 tcttctcttt ctttgctttc tatctcttta aattcagcat taacaagctg atttactaaa
    26221 gcttcattaa gcaaatcccc atccccaaac tctctagctt tttgaataat ttttaatact
    26281 cttaaatctt ttttttcata catcaaatca accctttaga taaacaacac tcacaaagcg
    26341 ttttaaagtc ttatcgcgac gataagagta aaatgtctta tcatcaaaac tacaaatatt
    26401 actgtcgata atatttttaa tacctaaatt ttgagcctga aattttacca aagcttttaa
    26461 atcaagtttt ctttcatcta aaaaatcttt aaattctact cttgcaaatt ctaaaatttc
    26521 tccatctatt tcatagtttt tagcacaaat actaggcaag ataaaaagat gaaatttctg
    26581 catgtctaaa ttaggatttt ttgtataaat tttatccaca cactctttta aaatattttc
    26641 aaaactccct tttcttcctg aatgaagtgc cgctataatg ccactttcat gccataaaat
    26701 caaaggcaaa caatcagcac ttaaaacaca aagtgcggta tttttttcta tacttatcaa
    26761 gccatcgcaa cttagatttt ttaaattctc atcataaatt tcaactttat tggagtgaat
    26821 ttgatccata aaaacacatt tttcaatatc cttaaaaccc aaatgagaaa ataaattttc
    26881 tttatgaact ttggctctaa agatattata gtctttatca taagcgcaaa aaacactgac
    26941 tttttgattc tttagtaaag ataagcaatt ctctccactt cttcccatga tagtccctta
    27001 tccttatctt gcatttgtgc ataaatataa cgagcaagca aatcgctttc tatattgatt
    27061 tctcggccta tttcatattc tttaaaaagt gtttccttaa aagtaatagg tataatggtt
    27121 aatctaacgc cattttctat aatttcattg atcgtaaggc taaccccatc tatacctata
    27181 ctgccttttc ttgccataaa tttcatcgct tctttaggca aagctatata aaaatcaacc
    27241 ccattttcat ctttttcaat cttttcaagc ctaccaataa aatcaatatg tccttgcatc
    27301 aaatgtccat ctatcctatc tccatacctt aaagcaggtt ctatatgcac cttatctttt
    27361 aaattttgta ctgctatgtg cttgcgactc tcgtgtgaaa gttcgagttc aaaaccatcg
    27421 ctatgaagtt tagtcacgct caaacaagct ccattaacag ctacactatc gcccaaatta
    27481 gggcgataat ttgcctttaa attcaaaaca ttattttgat aagatttaac cttagcaatc
    27541 tctcttataa gtccattaaa catcacttaa ccttaaaaaa ttttattcaa taatttattg
    27601 ataccctcat ctactttttc tcctgctttt tgaactccat cttgggcttt atcacctaca
    27661 atatttttaa tggaatttac tacactaccc gcttcaagtt taacttgggg cttttgtgtt
    27721 gttcctgtta tattgccttt aaaattggct ctatctatct tgatatcaaa aggcaaattc
    27781 aagcttccgc ttttagaatt cagcatacct gaagaaacaa ggacataaga acgatccgct
    27841 tgcatattta aatcaagctt gatgttttct ttgttaataa gcgctttagc attggcagta
    27901 tgaaaaacat cagtagtgat atcttttaaa gtaataagct taagagctgc agtgatagca
    27961 ttaggtttaa gcttaccctc tttcatatct gcattaacct ctccttgctc gcttataaga
    28021 ttatacttag catctaaatt tgccttgcct tgatatatat ctataaaatc aagtccactt
    28081 gccaaagtac ttaaatccac tccctctaac tttgcattta aaatattatt tttcaaagta
    28141 ctatcaagtt ttccttcaaa taaattttta ctcaatgcag taaaatttaa agttttatca
    28201 aaaccaattt ttccattaaa actcgccttt cctttgagtt ttctatcgag taaaaaacct
    28261 agctttgaaa aatcagcaat atctaaaaca taatccgaat ttaacaccat tttgttaatg
    28321 tcaaattttc ctttaaaatt actaagatta gccaaagaag aatttaaaac accctcaaaa
    28381 tcagcgatat tattttttaa atctgctttg atatttaaat cataatttgt attgcttgga
    28441 aattttttat ccattatctg acttaaaact acagcattta aaataccttt agcttctgca
    28501 tttatcttgc cattaagatt gttaaaattt atatcatcta aacgcgcact agcattaact
    28561 atcccgcttg cataatttgg catacctaca atagtaaaaa ccttggaaag atcaagcttg
    28621 tttatatcta agtctaattt ttttccatta gaatttgcct tgattaatcc acctgctata
    28681 tttgcattag catttaaatt ctgaatttga gcgcctataa tatgtgcttt tgcgttaagt
    28741 tctgccttgc cttgtaactt ttgtcctgct atggcattaa attgagataa atcatcaata
    28801 aaagcattta agtctgtgtt taattctgca tttttaagat tgtaagttcc atcaagtttt
    28861 ttaatattga gcaaattaga cgctaaaagc gcattataag atatattgcc atttttagct
    28921 ttagctttgg catcaagact aaaatttgta tttggaagat cgagcttggc tattttttta
    28981 atttcagcac tatttaattt tgcattattg atttttacat ctgcattgaa atttgcaaaa
    29041 tccaatccct cgcttacaag atttgcattt aaatttccag aaacaatacc accatagcct
    29101 ataagagcta gtattttttc caagctagca ttgcttgcat taagatttaa ttgattgttt
    29161 tttaaatttg ccttcacttc tccgccaagc cctataacat tagcatttaa accagttaaa
    29221 gcattattag ctacactcgc atcacccttt actcctaaag atccatttag ctttgttttt
    29281 gtaagctttt caagttttgc aagattaggg actgatagat caaaatccgt atttagggta
    29341 ttttgaataa gattataaag ggttttttga gtttgtaaag ttaaataact attataaatt
    29401 ttactcactg tatagactgt atcatcttta atatttgcta aaatttcagc tttaagattg
    29461 gaattttcag gtaaatctat attgaattct tttttaattt ctgcataatt tatataagta
    29521 ttatcaagtt taatgatagc atttccatca ggttttaaat ctttagcaga aattttactt
    29581 gctatatcta tagttccttt ggctaaattt cctcgtccaa aaagtgctag caattcagaa
    29641 atttgaagat cgttagcgct taaatttaaa gcaataggag aataattata aactcttgca
    29701 tctaaaagca cattagagcc aaacaaatac cccttgccat cgatcataaa atcgctcgat
    29761 ttaccattaa tctttcccaa aaaagccaaa ttttgattta aatttaaacc taaattttta
    29821 gcataatttt tatccaaact gataatataa tcaagatcaa agccaagttt aaatagactt
    29881 aaatttcctt ctagttttaa atcggccata ttggctaaat ttgcctcaat atcaagactt
    29941 gaaaaacaca aaacaaactg agtaatattg gcatcaagac ctgtactttg cttgatttta
    30001 tcttgaataa aatttgcgac tatattatta ccaaggctag taaaaagcaa ggtataaagt
    30061 gcgattaaaa gcaccacaat aaaagccgct actccataaa atattttctt cactttaaat
    30121 cctttagttt tttttattaa ttaactttag tctaattaac taaagtttta taaatatttt
    30181 tactcaaagt attgacaaaa ttcatttttt atagtatgat attatcactc aaaattaaag
    30241 agtgctaaaa atcaatattt ttaaggatgg acaaaatgaa ttttcaacct ttaggaaagc
    30301 gtgttttagt aaaacgcgta gaagaaacca aaacaacagc ttcaggtata attataccag
    30361 ataatgctaa agaaaagcct ttaatgggtg aaatagtagc agtaagtaaa gaaatcactg
    30421 atattgcaaa tggtgataaa atcgtatttg ctaaatatgg cggaacagaa atcaaaattg
    30481 ataatagcga atatttagtt ttaaatttag atgatatttt aggaatttta aaataattta
    30541 aaaaaaagga tagacaaatg gcaaaagaaa ttattttttc agatgaagca agaaacaaac
    30601 tttatgaagg tgttaaaaaa ttaaatgatg cagtaaaagt tactatggga ccaagaggtc
    30661 gtaatgtttt aatccaaaaa agctttggtg cacctactat cactaaagac ggtgtaagtg
    30721 tagctaaaga agtagaactt aaagacagtc ttgaaaatat gggtgcttca cttgttagag
    30781 aagtggcaag caaaacagca gatcaagcag gtgatggcac aacaactgca actgttttag
    30841 cgcatgctat ttttaaagaa ggtttaagaa atattacagc tggagcaaat cctatcgaag
    30901 ttaagcgagg tatggataaa gcttgcgaag caattgtagc tgaacttaaa aaactttctc
    30961 gtgaagtaaa agataaaaaa gaaatcgctc aagttgctac aatttcagca aattcagatg
    31021 aaaaaatcgg aaatttaata gcagatgcta tggaaaaagt aggcaaagat ggtgttatca
    31081 ctgttgaaga agcaaaatca atcaatgatg aattaaatgt agttgaaggt atgcaatttg
    31141 acagaggtta tctaagccct tattttataa ccaatgcaga aaaaatgacg gtagaacttt
    31201 caaatcctta catcttgctt tttgataaaa aaattgcaaa tttaaaagat ttgttaccgg
    31261 ttttagaaca aattcaaaaa acagggaaac cacttttaat catcgctgaa gatatcgaag
    31321 gtgaagcact tgcaacttta gttgtaaaca aactacgcgg cgtattaaat atctctgctg
    31381 taaaagctcc aggttttgga gatagaagaa aagctatgct tgaagatata gcgattttaa
    31441 caggtggtga agtgatctct gaagagcttg gaagaactct tgaaagcgct acaatacaag
    31501 atcttggaca agcttcaagc gtaatcatcg ataaagataa cacaaccatc gtaaatggcg
    31561 caggcgaaaa agcaaatatt gatgcaagag taaatcaaat caaggctcaa atagctgaaa
    31621 caagctctga ttatgataga gaaaaattac aagaaagact tgctaaatta agcggtggtg
    31681 ttgcagttat caaagtaggt gcggcaactg aaactgaaat gaaagagaaa aaagatcgcg
    31741 ttgatgatgc tttaagtgca actaaagcag cagttgaaga aggtatagta ataggcggtg
    31801 gcgcagcttt aatcaaagct aaagctaaaa tcaatcttga tttaaaaggt gatgaagcta
    31861 tcggcgcggc tatagttgaa agagctttaa gagcaccttt aagacaaatc gctgaaaatg
    31921 caggatttga tgcaggtgta gttgtaaaca gcgttgaaaa tgctaaggat gaaaatacag
    31981 gttttgatgc tgcaaaaggc gaatatgtaa atatgcttga aagtggaatt atcgatccag
    32041 ttaaagtaga aagagtagct ttacttaatg cagtttctgt agctagtatg cttttaacca
    32101 cagaagcaac aatcagcgag atcaaagaag ataaacctgc aatgcctgat atgagtggca
    32161 tgggcggaat gggtggcatg ggcggaatga tgtaagccct actacgaata atcagcaaat
    32221 tccttgctga ttatttcttt ttaaactgcc aaattttata agatacaaaa aataaaatca
    32281 aaaaaacaag aaaattaaaa tacgcattaa aaatctgcca agatacgata aaagacaata
    32341 ccataatcac gccataaaaa tttgcaaagc gagtcatttg cctaaaagtc ttcgcattta
    32401 tcaaaatata ctctaaaaat aaaagtgaaa ttaagataca aagattgctt aaatcattgt
    32461 gtgtcaatga catcccccaa aaggtggtct tcctatgtat gtttgctctc caacacctgg
    32521 tgcattagca tacgaaatgc cataacccat accaagcctt attaaagcag caataggcac
    32581 agccctatct tctctttgtt cttcggcata tttacaaaca gcttgcatag ctgtataaga
    32641 caaacataaa gctatgagat aaatcaaact tttttcatgg ttcatttctc tcct
//
LOCUS       DAQUWA010000011        32004 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.011, whole genome shotgun sequence.
ACCESSION   DAQUWA010000011 DAQUWA010000000
VERSION     DAQUWA010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32004
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.011"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..3001)
                     /gene="cmeF"
                     /locus_tag="R8X70_000442"
     CDS             complement(<1..3001)
                     /gene="cmeF"
                     /locus_tag="R8X70_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeF"
                     /protein_id="HEF2928254.1"
                     /translation="MFKLAINRPITVLMFFLAFMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKVNGDLNFVESKVTKEIENALSEIDGVKTITSAAYDNFSVSVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKIGSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVEG
                     VGKIEAKGFLEPQIRIELKPNEFRKYNLNALDVANIIKSQNFKQALGELNNNQDNYII
                     KGYFEATNLEELSNLRIKTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPILEKQIPKDISINMLYDKSLNIHKHLSQVIFDMVLGIFLTLVIV
                     FLFLRNLSATLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENIAKKLKTYPPLQAAFLGINEIGFSVLSISIVLLCVFIPISYMNSISGLFFNALGIS
                     VASGIVISFLVSVFLIPSIGARFLNPKENKFYEKTEAFFEKIEQKYENLLYKILQNKV
                     KFILATLVFIGFSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEK
                     IKNDSNVKYAFLLVGYDDAKDATKAKIYVKLKNLDERNLRQSAIVSLYRQKFQDESLK
                     IKILELPKIEGTGIDDPVQFLILGDDLNTLKEAASQAKEILGTNARIVDISDNANATK
                     DEVALHINKEKAKLLDVNPQYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKD
                     IEALKRISIKNNQGINLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGAVQ
                     KLLLDNMDKILNNNPSLSYAFSGFINLLGETVQGFAMAVALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGASIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLIAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFQFCFKLDSKLRKIYE"
     gene            complement(3004..3744)
                     /gene="cmeE"
                     /locus_tag="R8X70_000443"
     CDS             complement(3004..3744)
                     /gene="cmeE"
                     /locus_tag="R8X70_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeE"
                     /protein_id="HEF2928255.1"
                     /translation="MKKILFLLLAFNYAFGEEIYASFNVEASKQSKLALESIGLVQKI
                     PVEIGQKVSKGELLLALDQESEKIALQNAQNSYQLALVEYENTKSRMQKIKAVENVID
                     KQSYEDMKAKFDAANLNLIKAKINIAYYKNIMAKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKNKVKLGDDFFYKIDQNGTEFKGQISLIYPSIEV
                     KTRKIYAEVQTTNLTPGLFGEGRIITKD"
     gene            complement(3741..5015)
                     /gene="cmeD"
                     /locus_tag="R8X70_000444"
     CDS             complement(3741..5015)
                     /gene="cmeD"
                     /locus_tag="R8X70_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit CmeD"
                     /protein_id="HEF2928256.1"
                     /translation="MLEKYLKSAIFLALYPLAMLASNLHEFIALSQNNESYLIKQMQS
                     EQANLDKEQAFRNYLPSLSLNSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGAREA
                     NLRALESKEKLSLLDKEQSKNYLALNAITLYFNTLSLKKILLANQQKVAFLKSTFERL
                     QKFYDAGLSPKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSDTDFKVQGNAFL
                     ENPQQEKSQNYEVMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAP
                     FVNLADQFLEKYSQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNK
                     EELNYLDKSLKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEAKFKA
                     QSDLELAKNEFEITKANYYFNAGIDLNSKVKE"
     gene            5141..6937
                     /gene="lepA"
                     /locus_tag="R8X70_000445"
     CDS             5141..6937
                     /gene="lepA"
                     /locus_tag="R8X70_000445"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEF2928257.1"
                     /translation="MSVKNIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMD
                     TMDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLV
                     VDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAI
                     CVSAKTGVGIKELIETIITKIPAPKTDDEAPTKALIYDSWFDNYLGALALVRIYEGSI
                     AKNDEVLVMSTEKKHIVQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTI
                     TLVKNKAKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSL
                     ALGFGFRVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTDGELVKIQNPSEL
                     PPVNKIDHIKEPYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPL
                     NEIVMDFYDKLKSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQ
                     SKGRELVSAMKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRK
                     LLEKQKEGKKRMKAIGKVNLPQEAFLSVLKID"
     gene            7028..7672
                     /locus_tag="R8X70_000446"
     CDS             7028..7672
                     /locus_tag="R8X70_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928258.1"
                     /translation="MNKKILFFIALALFLNACASKQNTFTQVNQLSKASQCVPCESSS
                     GFEAKIKGLLYVSDIGIQCCANKRTLDTGVALKKVYLHRFYDLKEEQKVLNANGQKLF
                     VNLDFNAIFYVYLKQELEARGIIVLDDNKANSPYVTKIDLAFTGYSAKQDSLGLHSRL
                     VGVLSLSDINKNKKFTLRTKQDVQGFENLKDISFYTHLLIKQMANKAASIISEL"
     gene            7669..8244
                     /locus_tag="R8X70_000447"
     CDS             7669..8244
                     /locus_tag="R8X70_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEF2928259.1"
                     /translation="MKCLNCGVFTLLCFCHHCAEELSEFSLGVRELEKDFKVYSFYKY
                     HEIKHLLHAKHKFYGYFVFHFLAKLSFFKFKNFFSVNEQINVIPLDDRVENLLYSHSA
                     ILAKYLKTEFIKPIFGALHAQNHLKYSGKSLKFRQDNKRKFKLLKKINNPVILVDDIV
                     SSGSSLLEAKQFLEKNKISVLFAVVLADAKV"
     gene            8284..10851
                     /gene="gyrA"
                     /locus_tag="R8X70_000448"
     CDS             8284..10851
                     /gene="gyrA"
                     /locus_tag="R8X70_000448"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEF2928260.1"
                     /translation="MENIFNKDSDIELIDIENSIKSSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMNDLGVGSRSAYKKSARIVGDVIGKYHPHGDIAVYDALVRMAQDFSMR
                     YPSIDGQGNFGSIDGDGAAAMRYTEARMTILAEELLRDIDKDTVDFVPNYDDSMSEPD
                     VLPARVPNLLLNGSSGIAVGMATNIPPHSLNELVDGLLYLLDHKDASLEDLMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKIRAKTHIEKKSNKDIIVIDELPYQTNKARLIE
                     QIAELVKEKQIEGISEVRDESDREGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLIELLNLFLNHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSPDNTTARDSLVAKFGLTELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLDEILKSETLLENLIRDELKEIKSKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQADEKIMAIIPTTDFDENKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVKAINLDENDELVTAIIVQRDENEETGLLDDDSLNDENTNSDENL
                     IESIKGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAVVIENDE
                     QEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTDKTKELISVVIVDESMDLMALT
                     SSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEELEDEISDENLDLNL"
     gene            10919..11440
                     /gene="flgP"
                     /locus_tag="R8X70_000449"
     CDS             10919..11440
                     /gene="flgP"
                     /locus_tag="R8X70_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HEF2928261.1"
                     /translation="MKKFYFMLIIAGIFAGCTASTNSTTAKNPNSPSTSAQASDIVVQ
                     KVDKDDVRDIIREEKMLAPDVSESELSFSAVGEGIAPLNTVSSAQALALAKRAAITDA
                     YRQLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNVEL
                     KIDADKWKELFAY"
     gene            11416..11865
                     /locus_tag="R8X70_000450"
     CDS             11416..11865
                     /locus_tag="R8X70_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928262.1"
                     /translation="MERIVCLLIFFSFKLIAQDEFIFWAELSNKNLILFHQSQNLSPA
                     MTRSENTISEFACEISYTDDDLKKLPRTELGMIDDDMSKAIKFDFLNAHKDELSDCFM
                     GARISVKDIVKTDLLKAQNETYVKILPLRFSVEFGERNALIYYLKKK"
     gene            11914..13212
                     /locus_tag="R8X70_000451"
     CDS             11914..13212
                     /locus_tag="R8X70_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEF2928263.1"
                     /translation="MNLVIVEDDINMRKSLEIALGEYEEFQIKSYKSATEALKKIDSD
                     TDLIITDINMPGIDGLEFIKACENKYDFIIMTGNATLNRAIEAVRLGVKDFLTKPFDI
                     ETLVEAIKRAKVIREKTADKKIKKQEEKQENGFFSSSDKLEQVLSLSQKAAKTDASVM
                     LFGESGVGKEVFSRFIHQNSKRSQKPFVAINMAAIPSNLIESELFGFEKGAFTDANAT
                     KIGLFEMANNGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISATN
                     ANLQDKIDNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLENTCKEYELEMKK
                     ISQEAQKALLEYNFPGNIRELISIVQRACILSEGLEISEQDLFLEARSVKKDVKNLEK
                     ELLEQILEQCEFDKEKASNELGMSIENLNNKIKQYKIKEK"
     gene            13212..14243
                     /locus_tag="R8X70_000452"
     CDS             13212..14243
                     /locus_tag="R8X70_000452"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEF2928264.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSAG
                     NQIEFRGKSYTIKELTEDVFRENPVDIAFFSAGGSVSEKYAKFAVEAGAVVIDNTSHF
                     RMEKDVPLVVPECNPEDIKEWKKTGIIANPNCSTIQMVHILKPLNDAFDLKRVDVSTY
                     QAASGAGKEGMEELVRAMQSFFAFKLDEFEAQTFPHTLALNLIPQIDVFMDNGYTKEE
                     LKMINETQKILHKNLEISATCVRVPVLRSHSEAITMHFAKEVDVNKARDILQNAPSVV
                     VIDEPKDKKYPMPLMTSDTNETYVGRIRLDVTHKNILHLWCVADQIRVGAATNAVRIA
                     QKWLELENK"
     gene            14257..14763
                     /locus_tag="R8X70_000453"
     CDS             14257..14763
                     /locus_tag="R8X70_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HEF2928265.1"
                     /translation="MLEKIFESLLVKSRIVTILPVIFGLVGAFVLFFIASYDVLKVIL
                     YTYQYFFSAGIKIDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPTDMAFLAGSILALCVGL
                     YFLHKGGH"
     gene            14817..15017
                     /locus_tag="R8X70_000454"
     CDS             14817..15017
                     /locus_tag="R8X70_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
                     /protein_id="HEF2928266.1"
                     /translation="MKKLFLILLAVINVLTFSYAAPLDEVFKDVEVSGVVRYRYETQR
                     VKKTDNKNKKHNVTNRTEITIK"
     gene            15027..15458
                     /locus_tag="R8X70_000455"
     CDS             15027..15458
                     /locus_tag="R8X70_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEF2928267.1"
                     /translation="MFRYLTIFSIFVVALFGINLKSFFTYTFDANKQYDMVQAKDLYF
                     KNKCNTCHGDNAEKSVAGSRVLKDMSPEDIKAALVGYTLDGSTSANASQMAFYARNLS
                     HDDMDNIIAYIKGGNFAVDLQVKDLLEEEPPQKTKHNTFLK"
     gene            15494..16618
                     /locus_tag="R8X70_000456"
     CDS             15494..16618
                     /locus_tag="R8X70_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEF2928268.1"
                     /translation="MKKVTLVFSALALANCLYAKTINLGVVLPLTGPVAAYGQDVFNG
                     IELANKLNAKLDNGDEVKLIVIDTKGDKLETTSAVNRLIAQDKVIGIIGEATTPNTIQ
                     AISIVEDKKIPLIAPVASGDKLLEGKKYASRVCFSDSFQGDKFASYVTKELNLKNAVV
                     IIDQSNVYSLGLAKAFEKSLKENGGKVIKKLAISSGDKDFRAVVSQLKSLNPDFVYMP
                     IYHPEAALIARQAKQIGFDKLLAAGDGVNNQTFIDLGSTAVNGVVFTDSFDSSNPSTA
                     RGKTFINEYEKIKGNANLPAFSAMGADAYYVMLNAMNACQNTLTSECINEKIHQTSNY
                     EGVGGIISIDASGNAIRPVVIKEIQDGKQVYKTLINPKEK"
     gene            16618..17727
                     /locus_tag="R8X70_000457"
     CDS             16618..17727
                     /locus_tag="R8X70_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEF2928269.1"
                     /translation="MKKKIILAAALALSLQAKEVNLGVVLPLSGATAAYGQSALEGIK
                     LANEMQSTLANGDKINLVVLDTKGDKIESASAATRLVNQDKVLGLIGEMVTANTLQVM
                     RIAEENKVPLIAPAATGDKLLENKLYSSRVCFMDSFQGSSLAKYAFEKLNHKKAVIVV
                     DQSTDYSLGLAKAFEKEFKAKGGEILKTLRVNSGDKDFKAIATQIKILNPDFIFLPLY
                     YSEASLFVRQAKLIGLNTPMGSADGVADATFIKLAGNASEGYIFTDSFDANNPTTQLS
                     KDFIAKYAKENQSKEVPNFTAMGADAYFVMFNAMNACQNTLTSECINEKIHQTNNYEG
                     VSGVISIDKSGNATRSVVVKEIKNQKQTYKDTINP"
     gene            17735..18694
                     /locus_tag="R8X70_000458"
     CDS             17735..18694
                     /locus_tag="R8X70_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEF2928270.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYIALLLINFFSPIINHLNQTFFGSDELGKYLVVIFAAALVASMIFSSIVGILI
                     DKIAYKPLRKAPRISLLITAIGISFFLQNLFNVIFTSTEQQFPAPPIFETLVSIGGVS
                     TTLGSLLVPLVTLVVMLGVLFILYKSKYGIAIRALAFDIQTVNLMGINANRIIAIVFA
                     LGSALAALAGIFWSSNYYSAYPTMGTLVGLKAFAAAVLGGIGSVVGAVLGGLIIGLTE
                     VMAVAFFPELSGFKDAFAFIFLVFILLFRPTGILGINFEKSRF"
     gene            18697..19737
                     /locus_tag="R8X70_000459"
     CDS             18697..19737
                     /locus_tag="R8X70_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEF2928271.1"
                     /translation="MVKIKISALVYIVLAIAFIMLAPQFFDGYGIGILNQIAIYITLA
                     VSYNLINGVTGQFSLEPNGFIAVGAYAAALVLLSSEQKLDLFSLEDPNPIILALHTNS
                     FILALLVAGFSACVLSLILAFAVFRVRGDYLAIVTLGFGIIIQKLAINFPSWTNGSMG
                     LNGIPLLSNLYWTGGVAIISVILILNLVYSKFGRAMQAIRDDEDAASAMGVNTFWTKT
                     LAFGTSAFLEGVGGGLLVCLLASVSPEQFGFEFTFMLLIIIVLGGLGSTTGAILGAIL
                     IIGGREWLRFLDEMQIKIDFLGIDMGSMPGLRMVVFSLILILVMLFARRGIFGDRELN
                     SFFKRPSKKGLK"
     gene            19737..20507
                     /locus_tag="R8X70_000460"
     CDS             19737..20507
                     /locus_tag="R8X70_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928272.1"
                     /translation="MILELKNITKKFGEVRAINETSFHIKEGEIFALIGPNGAGKTTL
                     FNIITGNYKPTSGEVFFQNKKINDLKPHKIVHLGIARTFQNIRLFSSMSVLENVMIGF
                     DKQMKYSVLEAFLHLGRFHRVEQEFKNKAYKLLEELGISEFADEKATSLSYGQQRKVE
                     IARAMATNPKLLLLDEPAAGMNSSESDELAELILKLRKDYKISVLLIEHDMKFVNRLC
                     DKVLVLDYGKTIFEGKISDAVNHKEVIAAYLGDFDASS"
     gene            20494..21189
                     /locus_tag="R8X70_000461"
     CDS             20494..21189
                     /locus_tag="R8X70_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928273.1"
                     /translation="MLVVKNLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTL
                     NALLNAVKRTGEINFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAYN
                     NSENYEHLREQMYKLFPRLASKKHAMAGNLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGLIAMQGEAKKL
                     IGDDNIRKKYLGL"
     gene            21205..24465
                     /gene="ccsB"
                     /locus_tag="R8X70_000462"
     CDS             21205..24465
                     /gene="ccsB"
                     /locus_tag="R8X70_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HEF2928274.1"
                     /translation="MKNIIKSVGDLRISIVLFLLFALSCGLATFIESAYGTPTAWAMV
                     YDSFWFEYIQLLLGINLLFGMFRYKMFALKKMPLMIFHFSFLFILLGSAMTRYGGFEG
                     LLAIREHTQNALVESSKTSLRISTIKDGERYTSVNDRYIGNLPFANSFKLNLNMGDEK
                     AVLKYENLILDADYTYKEDNVSSPLLVLTISEKKSQGANLEFRSGEVQNINGINFAFM
                     NDDVAKPYIKIDKNLKLSSSENLSVFNMKKGENSTLKIGEKADAKDLRLYSLDNLNFV
                     VKFASLHGAQEIQGVNRPQDESFWLWFKSAWLEFARTIMISSFGEPQNWKASWLTNFK
                     DFAMSKDYQALELKGAHALKLQLDYKNESKEFYVFEYNKPTVVELAGQKFFISWALAY
                     EQLPFEIYLRDFVIDRYPGSMSPASYASEITVKNNEDNFDYRIFMNNVLDYKGYRFYQ
                     SSYDQDEKGTILSVNKDPGKIPTYIGYFLLCLGMFLNFLNPHSRFRTLARLINKDALK
                     HTASVLALFVALFGADKMLAQDLNISLEQNIPIVDKAHVKELKALIVQKSVDGRMIPF
                     DTLAREILEKIHKSADYKGQEASAIMLSMLINVDLWQNEAFILMPSNKNVREAIAEIL
                     EISPELKYVKYKDFFDANNRYKLQKYVENANRKNPNARGVFDKEIIYLDERANVVNLV
                     FSGELFKFIPIQNHDNNAWLAPFSAITTLKDEEGQFVFTLIKNYFSSVDSAFHDGNWT
                     RANEALGFIKQYQEKIGHEVMPNKTKVEMEIFSNKAEIFVKLAPVYLIAGFLLLIVLL
                     IKMVAPKLKISLIFKVIYILNILAFIVHTVGLGLRAYLADHAPWSNGYESMVYIAWAL
                     SLSGIFFSRKSPIALSLTSILAGIVLAVAHLSEMNPQITNLMPVLNSYWLSIHVSVIT
                     ASYGFLGLCSLLGIFTLLLMCFLKENNQYNQSILRNITEATRINEMSMIFGLCLLTVG
                     NFLGAIWANESWGRYWSWDPKETWALVSILVYAAILHIRMIPKYSNQFTFALWSMFAY
                     WVVIMTYFGVNYFLVGLHSYAAGEAVQIPSYVYWGVVIMIVLALLARRKREFVGKL"
     gene            24465..24920
                     /locus_tag="R8X70_000463"
     CDS             24465..24920
                     /locus_tag="R8X70_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928275.1"
                     /translation="MSHIFWVIICTSGALLLFLSLIAYLILSDNKKKNKKQKNTENTA
                     KARKFDNDLNKMIAAASDLKYSDRDLKELVKLFVQTHKLGSKTSKELDEKTKNKLEFV
                     SALAANPKASPQTVSFLNQELKKISASYKKEIDAYEQMGLAKRKIKEEK"
     gene            25086..25226
                     /locus_tag="R8X70_000464"
     CDS             25086..25226
                     /locus_tag="R8X70_000464"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928276.1"
                     /translation="MQDASRKYLVVLHTMINYSVESYGLFGDEREVGSFTSVGHKGVD
                     GG"
     gene            25296..25466
                     /locus_tag="R8X70_000465"
     CDS             25296..25466
                     /locus_tag="R8X70_000465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928277.1"
                     /translation="MRFYKMLLALILSTNLANAYDTTIIYNEDKPIFKLDFYNKGENT
                     VFLVKLLPLPIL"
     gene            25637..25786
                     /locus_tag="R8X70_000466"
     CDS             25637..25786
                     /locus_tag="R8X70_000466"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928278.1"
                     /translation="MQGESIDTIRQELIGVSEDFFTKASVEYLGHINMGKLDWYIAFS
                     SYYPT"
     gene            25881..27855
                     /locus_tag="R8X70_000467"
                     /pseudo
     CDS             25881..27855
                     /locus_tag="R8X70_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
     gene            27867..28460
                     /locus_tag="R8X70_000468"
     CDS             27867..28460
                     /locus_tag="R8X70_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEF2928279.1"
                     /translation="MLNTNNIDIDDTLANTKTTGAYAGIFSKYDLEDFYLLGSFRMGY
                     EHTKLNRNVNIGAFSANYNSKFNSYLISEMVGIGKSFNHYGVSYGPLAYIEHSFLYHF
                     AINEENQNSTALNIDSKNFHALNSFMGFNVNYEKGMSDKAIVNFYFLGGWNHYFLDSL
                     KNNASFKDASLNKFYTKSKLSNQDSLYLQGEIDFTHN"
     gene            complement(29053..29129)
                     /locus_tag="R8X70_000469"
     tRNA            complement(29053..29129)
                     /locus_tag="R8X70_000469"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(29093..29095),aa:Arg,seq:gcg)
     gene            complement(29184..29954)
                     /locus_tag="R8X70_000470"
     CDS             complement(29184..29954)
                     /locus_tag="R8X70_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEF2928280.1"
                     /translation="MVCDENLSKFLANKNLNTLYMDFLGQKILILNSYSSKTKKANFS
                     VFGFEDDTIFKLENAQFKPFSLNDFLSTIRAILEDCKNENAYFERILERKENILLKGN
                     LIKNFFKKSFILKQKINKNLKNLSLLDEALNLLAGTSPHKKALKPIIFAVGVTLKNNK
                     EIITRLNELHLLMSAIKNEKMNQSLYFLSILSAIFLPLNLIVGFFGMNTNDLFLSNVK
                     HATWYVFALICFILLSGLIVYRKKRKKELEFEDKILNK"
     gene            complement(29941..31074)
                     /gene="tgt"
                     /locus_tag="R8X70_000471"
     CDS             complement(29941..31074)
                     /gene="tgt"
                     /locus_tag="R8X70_000471"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEF2928281.1"
                     /translation="MEFKLKHKDNLARVCEITTAHSTFETPIFMPVGTVGAVKSLDAI
                     DLKEQLNAKIILANTYHMYLRPGSKIVKHFGGLHGFTKFDRSFLTDSGGFQAFSLSAN
                     SKHFQEGIEFKSHIDGSKHLFTPKSVLDTQYDLNSDIMMILDDLIALPATKERIKVSV
                     DRTIKWAKEAIDYHKQIQIQGLGLKQNIFGIIQGGTDYEERKRCALALNEMDFDGLAI
                     GGLSVGEENALMYETVENLNPFLDENRPRYLMGVGTPEDLVENIERGVDMFDCVMPTR
                     NARNGTFFTNFGKFNIKRAEFINDHESIDNECSCYTCRNFSRGYLNHLFKAKELTFFR
                     LASLHNLHYYLTLVAQAREAIKKSEFKKFKYEFYAKRLTNGMR"
     gene            31104..>32004
                     /locus_tag="R8X70_000472"
     CDS             31104..>32004
                     /locus_tag="R8X70_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkA"
                     /protein_id="HEF2928282.1"
                     /translation="MNHILIIIDGILAKHFLERLCFEKGLGYFFTIVCQNEENINLGA
                     NSEYIEFHHFDPTSTARLETLMNKSFKQAFIYMQDEFETKKTYEALRSLDANLEIEIM
                     DFWGLNINDVHTNLADARMTLSRRFMDFLPDIALTAYCVGLGVGEVMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLQPNDSILIVGDPAVLQSIFHNIRGKA
                     GQFPLPFGSNIFTLIDMKKMSEDTQERLLDTTLQLVKKSNAKKFFIRVLNPKLGALYD
                     KMKQLSDEQESIFFDFFNTDFANL"
BASE COUNT        10850 a         4319 c         5807 g        11028 t
ORIGIN      
        1 tctcataaat ttttcttaat ttgctatcta gtttaaaaca aaattgaaaa agtgcaggta
       61 ctacgagtaa ggtaagcaaa gtcgaactta taagtccaaa gataatggct attgccatag
      121 gagaattagc ttcatagccc gcaccccttg aaagagcaag tgggagcata gcaaaaatca
      181 tagcaaaagt tgtcatcaat atagccctta agcgcgattt tccagcgatt aaaagagctt
      241 tatcgggatc taaaccttca tggcattttt tattagctac atctacgagt aaaatagcat
      301 ttttccctac cataccaaaa agtaagatga tggcaataag tacaaaaagt gaaaaattat
      361 gccctgtgat aaaaagccct atagaagctc cgccaaaggc taaaggcatg gttatcatga
      421 tgattaaagg cagaataaaa ctttcataaa gtgcggctaa aacaagataa attaaaacaa
      481 aagcaagtgc tactgccata gcaaaacctt gcacggtttc acctaaaaga ttgataaagc
      541 ctgaaaaagc atagctaaga cttggattgt tatttaaaat tttatccata ttatctagta
      601 aaagtttttg caccgctcct aaggaaagat cattcactcc agctgtgatt ttcacagagc
      661 ggtttttatt gtaacgattg atagttttta aatctttact gtatataaaa tccaccacgc
      721 ttgaaagttc taaatttata ccttggttgt ttttaatgct aatgcgcttt aaagcttcta
      781 tgtctttttt aaattctgga gcaaaactta ggataatatc atcttttgaa ttgcctctat
      841 ccatgcttcc tacgctaagt tgcgagaaag aataccctaa aaccccagcg atatattgag
      901 gattgacatc taaaagtttg gctttttctt tgttgatgtg taaggctact tcatcttttg
      961 tagcattagc attatcactt atatctacaa tgcgtgcatt agtacctaaa atttcttttg
     1021 cctgagaagc agcttctttt agagtgttta aatcatctcc taagattaaa aattgcacgg
     1081 gatcatcaat gcctgtaccc tctatctttg gaagttctaa aattttgatt tttaaactct
     1141 catcttgaaa tttttgacga tataaactta ctatggcact ttgtcttaaa tttctttcgt
     1201 ctaaattttt aagtttaaca taaattttag cctttgtagc atctttggca tcatcatagc
     1261 ctacaagtaa aaaagcgtat ttgacattgc tatcattttt gattttttca agcaaattta
     1321 aacttttttc tttcatggct tctaaactta aatccttttt gctttcaagc aaaacttgaa
     1381 tttcactatc atcttccata ggtaaaaaat caagccctat gcgagtggct aaagcaaaag
     1441 aaaaccctat aaaaacaaga gtggctagga taaattttac tttattttgt aaaattttat
     1501 agagtaaatt ttcatacttt tgctctattt tttcaaaaaa agcttctgtt ttttcataaa
     1561 acttgttttc ttttggattt aaaaatcttg ccccaatact aggtattaaa aatacagaaa
     1621 ccaaaaagct tataactatc ccacttgcaa cgcttatgcc taaggcattg aaaaaaagcc
     1681 ctgatataga gttcatataa gaaataggga taaaaacaca aagtaaaact atacttatgc
     1741 ttaaaacgct aaaacctatt tcattgatac ctaaaaaagc agcttgtaaa ggcggataag
     1801 tttttagttt tttagcaata ttttcaatca ctactatagc atcatcgata aaaattccta
     1861 tgcttaaggt taaagctata aaagttaagc ggtttaaatc atagcctaaa agatcgataa
     1921 taaaaaaagt tgaaatgata gaagtaggta tagctatgca agcaatgaga gttgcactta
     1981 aatttcttaa aaataaaaac acgataacaa gggttagaaa aatccccaaa accatatcaa
     2041 aaatcacttg agaaaggtgc ttgtggatat ttaagctttt atcataaagc atattaatgc
     2101 ttatatcttt tggaatttgt ttttctaaaa taggcaaggc atttttgaca tttttaatca
     2161 tttcaagggt gttataattt gtgatttttc cgagttctaa aagcacccct tctttacctt
     2221 cgtataaagc actttgtttt tcatcttcat aaaggcttga aatattagca atatcgctta
     2281 aaaatactcc tgtttttatg cgaagattgc taagttcttc taaatttgtg gcttcaaaat
     2341 agcctttgat gatatagtta tcttgattgt tattaagttc gcctagggct tgtttaaaat
     2401 tttgactttt gatgatattc gctacatcaa gggcgttaag attgtatttt ctaaattcgt
     2461 ttggttttaa ttctatgcga atttgaggtt ccaaaaaacc cttagcttcg attttaccta
     2521 ccccttcaac tctttgcaaa aaaggtttta ttttatcatt gatttcacgc atgagttgta
     2581 atttatcttt agaatataaa aaaagcgaaa tagcagaacc agaatctgaa ccgatttttt
     2641 caatttcagg cttagaaggt aggcttaaag ttcctatttt atcacgcaca tcattggcag
     2701 ctacttcaag atttttaccc agtttaaact ccactacact cacactaaaa ttatcatacg
     2761 cagctgaggt tatggttttt actccatcaa tttcacttaa agcattttct atctctttgg
     2821 tgacttttga ttctacgaaa tttaaatctc catttacctt gcttgtaatc tttataagag
     2881 gtatggaaac attaggaaat aaattcacac tcatgctaaa agcagagatt agcccaaaaa
     2941 tcatgaaagc taagaaaaac atcagcacgg taataggtcg gtttatagct agtttaaaca
     3001 tttttaatct ttagtgataa ttctaccttc accaaaaagc cctggtgtta aatttgtggt
     3061 ttgcacttca gcataaattt ttcttgtttt tacctctata cttggataaa taagactgat
     3121 ttgtccttta aattctgtgc cattttgatc gattttataa aagaaatcat cacctaattt
     3181 aactttattt ttgtattttt catcaaaact taaaatcagt ttgctttgcg gataggaaaa
     3241 aatttctatt aaaggttgag ctactcctcc tactccttcg cccacttgta taaatttgtt
     3301 tgcgataata gcatcataag gtgcacgcaa ttcttttttt gccatgatat ttttataata
     3361 agctatattg atttttgctt tgattaaatt taaattagct gcatcaaatt tagctttcat
     3421 atcttcatag ctttgtttgt ctataacatt ttctacagct ttgatttttt gcattctgct
     3481 tttggtattt tcgtattcta caagggcaag ttgataagaa ttttgagcat tttgaagagc
     3541 tattttttca ctttcttgat caagagcaag taaaagttct cctttgctga ctttttgtcc
     3601 aatttctaca ggaatttttt gaactaaacc tatgctttca agggcaagct tgctttgttt
     3661 tgatgcttct acattgaaac tcgcgtaaat ttcttcgcca aaggcgtaat taaaagcaag
     3721 aagtaaaaat agaatttttt tcattcttta acctttgaat taagatctat acccgcatta
     3781 aaataataat ttgctttagt aatttcaaat tcatttttag caagctctaa atcgctttgt
     3841 gctttaaatt tagcctctaa agcttgaaga tattccacat aagaaacaag tcctgcttgg
     3901 tattttttat ctacactttc aaaagccaaa tttgcagcat ttaagctaag attaagagct
     3961 aaaatttgtt cttgtaaaac ttttaaactt ttgtctaaat aatttaattc ttctttattt
     4021 tttctctcac taaatcttgc gtttgcattg gctatttgaa cgtttaaacg ctctttttca
     4081 acttctttag cccttgcatt gaaatcaaaa attttccatt ccatgcctaa aataaactga
     4141 ttaccttgag aatatttttc taagaattga tctgctaagt ttacaaaagg agctggaact
     4201 tttggattat aattgttttt ataaaagtta aaattatctt gaatataaaa ttttggaaaa
     4261 tattcagctt ttgctaaatt tacactttct ttagcaagat tgatttgttc tttagctatc
     4321 attacttcat agttttgact tttttcttgt tgcggatttt ctaaaaaagc attcccttgc
     4381 actttaaaat ctgtatcact taaaatttta atctcttttt gtatattggc aagttttaat
     4441 tcattttgac tgagctctaa taagcttaaa tggtatttag ctttaatgct ttcaagttca
     4501 tctttagggc taagtcctgc gtcgtaaaat ttttgcaatc tttcaaaagt tgattttaaa
     4561 aaagctactt tttgttgatt ggctagtaaa atttttttaa gacttagggt gttaaaataa
     4621 agtgtgattg catttaaggc aaggtaattt ttgctttgtt ctttgtctaa aaggcttaat
     4681 ttttctttgc tttctaaagc tcttaaatta gcctctctag cacccccatc aaaaagtaaa
     4741 aaattaagag aaactttagc aaataaactt tcttgtggat cgataatgaa gcgatcttta
     4801 ttgttggcta cataagctga gtttagacta agagagggta ggtaatttct aaaagcttgt
     4861 tctttgtcta aatttgcttg ttcgctttgc atttgcttaa tgagatagga ttcattattt
     4921 tgacttagtg ctataaattc gtgcaaatta gaagctagca ttgctaaggg ataaagagct
     4981 aaaaatatag ctgattttaa atatttttca agcatttgat attttaatat gctttatata
     5041 aatttcaatt gaagtttttt atataaaata aaatttattt gttttaaaca taaattttgt
     5101 taaaatccta gctttaaaat tttatattta ggatgaaatt ttgtcggtaa aaaatattag
     5161 aaatttttcc atcatagcac atatagatca tggaaaatct actcttgcag ataggattat
     5221 tagcgagtgt ggtgctatta gcgataggca gatgagttca caagttatgg atactatgga
     5281 tatagaaaaa gagcgtggta tcaccataaa agcacaatca gtgcgtttaa attataaatt
     5341 taataatgaa aattttgttt taaatcttat tgatactcct ggccatgtgg atttttctta
     5401 tgaagtgagt cgttctttgg caagttgtga aggggctttg cttgtagtag atgcttctca
     5461 aggtgttgaa gcacagacta tagctaatgt ttatatagcg cttgaaaata atcttgaaat
     5521 cattcctgtg attaataaaa tcgatttacc taatgctgat gttgagaaag taaagcatga
     5581 aatcgagcat attataggta tagattgcaa agatgcaatt tgcgtgagtg caaaaacagg
     5641 agtgggtata aaagagctta tagaaacaat tattactaaa atccctgcac caaaaacaga
     5701 tgatgaagct cctactaagg ctttaattta tgattcttgg tttgataatt atctaggggc
     5761 tttggctttg gttagaattt atgaaggaag cattgctaaa aatgatgaag ttttggtaat
     5821 gagtacagaa aaaaaacata tagttcaaga tcttttttat cctcatccct taagtcctat
     5881 caaaactcaa tccttgcaat caggcgaagt aggggttgta gtgcttgggc ttaaaacagt
     5941 aggtgatgtg caagtgggcg atactatcac cttagtaaaa aacaaagcca aagaagccat
     6001 agggggattt gaaaaggcta aagcttttgt atttgcagga ctttatccta tagaaacgga
     6061 taaatttgaa gatttaagag atgctttgga taaattaaag cttaatgata gttccatcac
     6121 ttatgagcct gaaacctctt tagctttagg ttttggtttt agggtaggat ttttagggct
     6181 tttacatatg gaagtaatta aagaaagact tgaaagagaa tttaatcttg atttaatcgc
     6241 cacagcacca actgtaactt atgagattta tcaaaccgat ggagagcttg ttaaaattca
     6301 aaatcctagc gagcttcctc ctgttaataa aatcgatcat ataaaagagc cttatgttaa
     6361 agccactatc attactccaa gtgaattttt agggaattta atcactcttt taaatcgaaa
     6421 aagaggagtg caggttaaga tggactatat tacacctgag cgtgttttat tggaatacga
     6481 tgtgccttta aatgagattg tgatggattt ttatgataaa ttaaagtctt taacaaaagg
     6541 atatgcgagc tttgattatg agcctattga atttcgtgta ggggatttag taaagcttga
     6601 tattaaagta gcgggtgaaa atgtcgatgc tttaagtatt atcgtgccaa atgaaaaagc
     6661 gcaaagtaaa ggaagagaac ttgttagtgc tatgaaggaa atagttccta gacagctttt
     6721 tgaagtggct attcaagcaa gcataggcaa taaaatcatc gcaagagaaa cggttaagtc
     6781 tatgggtaaa aatgtaaccg caaaatgcta tggtggggat attactagaa aaagaaagct
     6841 tttagaaaag caaaaagaag gtaaaaaaag aatgaaagct ataggtaagg taaatttacc
     6901 tcaagaggct tttttgagtg ttttaaagat agattgatga taaatttaaa acttggcttg
     6961 aaatttgctt gtatttttaa tacaatttag aaaaatattt ttcaaaatat tttttaagga
     7021 gaaaaagatg aataagaaaa ttttattttt tatagcattg gctttatttt taaatgcttg
     7081 tgcgagcaaa caaaatactt ttactcaagt aaatcagctt tctaaagctt ctcagtgtgt
     7141 tccttgcgag agttctagtg gttttgaggc aaaaatcaaa ggccttttat atgttagcga
     7201 tattgggata caatgttgtg caaataaaag aactttagat acgggtgtgg ctctcaaaaa
     7261 agtctacttg catagatttt atgatttaaa agaagagcaa aaagtgctta atgccaatgg
     7321 gcaaaaatta tttgtaaatc ttgattttaa tgctattttt tatgtttatt taaaacaaga
     7381 gcttgaagca agaggtatta tcgtccttga tgataataaa gccaattcac cttatgtaac
     7441 taaaattgat cttgctttta cgggttatag tgcaaaacaa gatagtctag gacttcattc
     7501 aagacttgtt ggagtattaa gcttgagtga tattaataaa aataaaaaat tcactttacg
     7561 caccaaacaa gatgttcaag gttttgaaaa tttaaaagat atcagttttt acacacattt
     7621 actgattaaa cagatggcaa ataaagcagc aagcataatc tcagagcttt gaaatgttta
     7681 aattgcggag tttttactct gctttgtttt tgtcatcatt gcgctgaaga attatcggaa
     7741 ttttctttag gcgtaagaga acttgaaaaa gattttaaag tttattcttt ttataaatat
     7801 catgagatta aacatctttt gcacgctaaa cataaatttt atggttattt tgtatttcat
     7861 ttcttggcaa aattaagttt ttttaaattt aaaaattttt tttctgtaaa tgagcaaatt
     7921 aatgttattc ctttagatga tagagttgaa aatttacttt attctcattc agccatctta
     7981 gcaaaatatt taaagacaga atttattaag cctatatttg gtgccttaca tgcacaaaat
     8041 catctaaagt attctggaaa aagtttaaaa tttagacaag acaataaaag aaaatttaaa
     8101 cttttaaaaa aaattaacaa tcctgtaatt ttggtagatg atattgtatc ttcgggttct
     8161 agtttacttg aagctaagca atttttagaa aaaaataaaa tttctgttct ttttgcggtt
     8221 gttttagctg atgcaaaagt ttaatatgct ataataatag tttgaaattg cgaaggaaaa
     8281 ttgatggaga atatttttaa taaagattct gatattgaac ttatagatat agaaaattct
     8341 attaaaagta gttatttaga ttattctatg agcgttatta tcggtcgtgc acttcctgac
     8401 gctagagatg gcttaaagcc tgttcacaga agaatacttt atgctatgaa tgatcttggc
     8461 gtaggaagta gaagtgcata taaaaaatct gctcgtatag taggggatgt tatcggtaag
     8521 tatcatccac atggcgatat tgctgtttac gatgccttag taagaatggc acaagatttc
     8581 tctatgcgtt atccaagtat cgatggacaa ggaaactttg gttctatcga tggtgatggc
     8641 gctgctgcaa tgcgttatac tgaagctaga atgacaattt tagcagaaga gcttttacgc
     8701 gatatagata aagatacggt agattttgtt ccaaactacg atgattctat gagcgagccc
     8761 gatgttttac ctgctagggt gccaaattta ttattaaatg gctctagtgg tattgctgta
     8821 ggtatggcga caaatattcc tccgcatagt cttaacgagc ttgtagatgg acttttgtat
     8881 ttgcttgatc ataaggatgc tagtttagaa gatttgatgc aatttatcaa aggtcctgat
     8941 ttcccaacgg gtgggataat ttatggcaaa aaaggcatta tcgaagctta tcgcacaggg
     9001 cgtggtagag taaaaataag agctaaaact cacatagaaa aaaaatccaa taaagacatt
     9061 atcgttatag atgaacttcc atatcagact aataaagcaa gactcataga acaaattgca
     9121 gagcttgtaa aagaaaagca aatcgaagga atttcagaag ttagagatga gagtgataga
     9181 gaaggaattc gtgttgtaat cgaactcaag cgtgaggcga tgagtgagat agtgcttaat
     9241 aatcttttta aatctactac aatggaaagt acttttggtg tgattatgct tgctattcac
     9301 aacaaagagc caaaaatctt ttctttaatt gaacttttaa atcttttctt aaaccataga
     9361 aaaacagtga ttatcagacg aacaattttt gaacttcaaa aagcaagagc aagagctcac
     9421 attttagaag gtttaaaaat agctttagat aatattgatg aagttatagc tttgattaaa
     9481 aatagtcctg ataatactac agcaagagat tctttggtag ctaaatttgg acttaccgag
     9541 cttcaagcta atgcgatttt agatatgaaa ctcggccgtt taacaggact tgaaagagaa
     9601 aaaattgaaa atgaacttgc agagcttatg aaagaaatcg caagacttga tgagatttta
     9661 aaaagcgaaa ctttgctaga aaatcttatc cgcgatgaat taaaagagat aaaaagcaaa
     9721 tttgatgtgc cgcgtattac gcaaatagaa gatgattatg atgatattga tattgaagat
     9781 ttgattccta atgaaaatat ggttgtaacc attactcatc gtggatacat taaaagagtg
     9841 ccaagtaaac aatacgaaaa acaaaaacgc ggtggaaaag gcaagcttgc tgtaacgact
     9901 tatgatgatg attttatcga aagtttcttt actgctaata ctcatgatac attaatgttt
     9961 gttactgata gaggacagct ttattggttg aaagtttata agatacctga aggctcaaga
    10021 acagctaaag gaaaagcggt tgttaatttg attaatttac aagctgatga aaaaatcatg
    10081 gctatcattc cgactactga ttttgatgaa aacaaatcct tatgtttctt tactaaaaat
    10141 ggtatagtaa aacgcaccaa tttaagtgaa tatcaaaata tcagaagtgt gggtgtaaaa
    10201 gcgattaact tagatgaaaa tgatgaatta gttactgcta ttatcgttca aagagatgag
    10261 aatgaagaaa caggactttt agatgatgac agtcttaatg atgaaaatac aaactctgat
    10321 gaaaatttaa ttgaatccat taagggtaaa atgctctttg cagtgactaa aaagggtatg
    10381 tgtattaaat ttcctcttgc aaaagtgcgt gagattggtc gcgtaagtcg tggggtaaca
    10441 gctattaagt ttaaagagaa aaatgacgaa ttagtaggtg ctgttgttat agaaaatgat
    10501 gagcaagaga ttttaagtat cagcgctaag ggtataggaa agcgaacaaa tgcgggagaa
    10561 tatagacttc aaagcagagg cggaaaaggt gtcatttgta tgaagttaac cgataaaacc
    10621 aaagagctta ttagcgttgt aattgtagat gaaagtatgg atttaatggc actaacaagc
    10681 agtggtaaaa tgatacgcgt tgatatgcaa agcattagaa aagcggggcg taataccagt
    10741 ggtgttattg tggttaatgt tgaaaatgac gaggtggtta gcatcgctaa atgtcctaaa
    10801 gaagagcttg aggatgaaat aagcgatgaa aacttagatt taaatttata atagttattt
    10861 gagttggaac gctttttgct tttttatcaa ataattacaa tattttgaag gtgtaaatat
    10921 gaaaaaattt tattttatgc taataatagc aggaattttt gcagggtgta cagcgagtac
    10981 aaacagtact acagctaaaa atccaaatag tccaagtact tcagctcaag catcggatat
    11041 tgttgttcaa aaagtggata aagacgatgt tcgtgatatt attagagaag aaaaaatgct
    11101 agctcctgat gtaagcgaaa gtgagcttag ttttagtgct gtaggagaag gaattgctcc
    11161 tcttaatact gtttcaagtg ctcaagcttt agcattagca aaaagagccg caattacaga
    11221 tgcttataga cagcttgcaa gtaagcttta tggcgttaaa gttaatggta aagatactgt
    11281 aaaagatgca atgcttagaa gctcaaccat cactgcacaa gtaaatggtt taattaaaaa
    11341 tgctagcata attgatgaga attttaatca aggcctttac agagttaatg tagaacttaa
    11401 gattgatgcg gacaagtgga aagaattgtt tgcttattaa tattttttag ttttaaacta
    11461 attgcccaag atgaatttat attttgggca gaactttcta acaaaaattt aatccttttt
    11521 catcaaagtc aaaatttatc ccctgcaatg acgcgtagtg aaaatactat aagtgaattt
    11581 gcttgcgaaa tttcttatac tgatgatgat ttaaaaaaac ttccaagaac agaattgggt
    11641 atgatagatg atgatatgtc taaggctatt aaatttgatt ttttaaatgc ccataaagat
    11701 gaattaagtg attgttttat gggtgctaga atttctgtaa aagatatagt caaaacagac
    11761 ttgttaaaag cacaaaatga aacctatgtt aaaattttac ctttgcgttt tagtgtagaa
    11821 tttggagaaa gaaatgcttt gatttactat cttaaaaaaa agtaaattta agccgtattt
    11881 tgctattatt tgctaaaaaa tcaaaggcta gttatgaatt tggtgattgt tgaagatgat
    11941 atcaatatgc gaaaatccct tgaaatagct cttggggaat atgaagaatt tcaaataaaa
    12001 tcttacaaat cagccacaga agctttaaaa aaaattgatt cagatacaga tttgattatt
    12061 acagatatta atatgcctgg aattgatgga ctagaattta ttaaggcttg tgaaaataaa
    12121 tatgatttta tcattatgac aggaaatgca actttaaatc gcgccataga agcggtacgc
    12181 ttaggtgtga aggatttttt aactaaacct tttgatatag aaactttggt tgaggctatc
    12241 aagcgtgcaa aagttattcg agaaaaaact gcggataaaa aaataaaaaa gcaagaagaa
    12301 aaacaagaaa atggtttttt ctcgagttct gataaattag aacaagtttt aagcttgagt
    12361 caaaaggctg ctaaaacaga tgcatcagtt atgctttttg gtgagagtgg cgtgggtaaa
    12421 gaagtttttt cgcgttttat tcatcaaaat tctaaacgct cccaaaagcc ttttgtagct
    12481 atcaatatgg ctgccatccc ttcaaatttg atagaaagtg agctttttgg atttgaaaaa
    12541 ggggcattta ctgatgctaa tgccaccaaa ataggacttt ttgaaatggc aaataatgga
    12601 actttatttt tagatgaaat aggtgaaatg ccttatgaaa ttcaagccaa actcttaaga
    12661 gccttgcaag aaaaagaaat cacaagactt ggaagtacta aaagtatcaa aatagatgta
    12721 aggattatta gtgcgaccaa tgcaaatttg caagataaga tcgataatgg agaatttaga
    12781 tcggatttgt attatcgttt aaatacagtt cctattaata tacccccttt aagagaaaga
    12841 aaagaagaaa ttttgggcat agcgcaaaaa gttttagaaa atacttgtaa agagtatgag
    12901 ctcgaaatga aaaaaataag tcaagaagct caaaaagctt tgcttgaata taattttcca
    12961 ggcaatataa gagagcttat ttctatagtt cagcgtgctt gtattttaag cgagggatta
    13021 gaaatttcag aacaagattt atttttagaa gcaagaagtg taaaaaaaga tgtaaaaaat
    13081 ttagaaaaag aattgctaga gcaaatttta gagcaatgtg aatttgataa agaaaaagca
    13141 agcaacgaac ttggaatgag tatagaaaat ttaaacaata aaatcaaaca atacaaaata
    13201 aaggaaaaat aatgtcaaaa aaacaaaaaa tagctatagt tggagcaaca ggtgcggttg
    13261 gagaagagct tttaaatgta ttagatgagc ttgattttcc agtcgagagt attttgcctt
    13321 tggctagtgc aaaaagcgca ggtaatcaaa tagaatttag aggcaaatct tatacaataa
    13381 aagagcttac cgaggatgtt tttagagaaa atcctgtaga tatagctttt tttagtgcag
    13441 gcggaagtgt aagtgaaaaa tatgctaaat ttgctgtaga agcaggtgct gtggtaattg
    13501 ataacacaag tcattttaga atggaaaaag atgtgccttt agtcgttcca gaatgcaatc
    13561 ctgaagatat taaagaatgg aaaaaaacag gtatcattgc aaatccaaat tgttcaacta
    13621 tacaaatggt gcatatttta aaacctttaa atgatgcttt tgatttaaag cgtgtggatg
    13681 taagtaccta tcaagcagca agtggagcag gtaaggaagg tatggaagaa ttggttcgcg
    13741 caatgcaaag cttttttgct ttcaagcttg atgaatttga agctcaaaca tttcctcata
    13801 ctttagcact taatttgatt cctcaaattg atgtatttat ggataatggc tatacaaaag
    13861 aagagcttaa aatgatcaat gaaacacaaa aaattcttca taaaaattta gaaatttcag
    13921 ctacttgtgt aagagttcca gttttaagaa gtcatagtga agcaattact atgcattttg
    13981 caaaagaagt agatgtaaat aaagcaagag atatactcca aaatgcacca agtgttgttg
    14041 ttatagatga accaaaagat aaaaaatatc ctatgccttt aatgactagc gatacaaatg
    14101 aaacctatgt gggtagaatt cgcttagatg ttacacataa aaatatactt catctttggt
    14161 gcgtagcaga tcaaattcgc gtaggcgctg ccacaaatgc agtgcgcatt gctcaaaaat
    14221 ggttagaatt agaaaataaa taaaaggagt aaaagagtgt tagagaaaat ttttgaatcc
    14281 ttgcttgtta aaagtcgtat tgttacaatt ttacccgtaa tattcggtct tgtgggcgct
    14341 tttgttttat tttttattgc aagctatgat gttttaaaag taattcttta tacttatcaa
    14401 tatttcttta gtgctggaat caagattgat ttacatgaag atgtggtagc tttgattata
    14461 ggagctgtag atctttatct tatggctttg gttttattta ttttttcttt tggagtgtat
    14521 gaacttttta ttagcgagat agaagaattt aaacaaacca agcaaagtaa agtcttggag
    14581 gtgcatagtt tagatcagct taaagataag cttgcaaaag tgattatcat ggttttggta
    14641 gtaaatttct ttcaaagggt attgcaaatg aaatttgcta ctcctacaga tatggctttt
    14701 cttgccggat ctattttagc tctttgtgtg gggctttatt ttttacacaa gggcggacat
    14761 tgaggcttga ttatcttttt ttgatataat taaaattttg gtttgtaagg gtgattatga
    14821 aaaagctatt tttgatttta ttggcggtaa ttaatgtttt aactttttct tatgcggctc
    14881 ccttagatga agtttttaaa gatgttgaag tttcgggcgt tgtgcgctat agatacgaga
    14941 cgcaaagggt taaaaaaaca gataataaaa acaaaaaaca caatgttaca aaccgcaccg
    15001 aaatcactat aaaatagagg taggatatgt ttcgttactt gacaattttt tcgatttttg
    15061 ttgtagcgct ttttggtata aatttgaagt ctttttttac ttatactttt gatgcaaata
    15121 aacaatacga tatggttcaa gccaaggatt tatattttaa aaataaatgc aatacttgcc
    15181 atggagataa tgctgaaaaa agtgtcgcag gttctagagt attaaaagat atgtctcctg
    15241 aggatattaa agcggccttg gtgggttata ctcttgatgg tagtacttct gctaatgctt
    15301 cacaaatggc tttttatgct agaaatttaa gccacgatga tatggataat atcattgcat
    15361 atatcaaggg tggaaatttt gctgttgatt tgcaagtgaa agatttatta gaagaagaac
    15421 caccgcaaaa aacgaaacat aatacttttt taaaataaaa tattgagttt aatttaatga
    15481 aaggatggat aagatgaaaa aagttacttt agtttttagt gccttagctt tggcaaattg
    15541 tttatatgca aaaacaatta atttaggagt agtgttgcca ttaacaggac cagtggctgc
    15601 ttatgggcaa gatgttttta atggtataga acttgctaat aaattaaatg ctaagttaga
    15661 taatggtgat gaagtaaagt taatcgttat tgatactaaa ggcgataaac ttgaaactac
    15721 aagtgcagta aatcgtctta tagcgcaaga taaggttata gggattatag gagaggctac
    15781 cacgccaaat actatacaag ctatatcaat tgtagaagat aaaaaaattc cactcattgc
    15841 tccagtagct tcaggagata aacttctaga gggcaaaaaa tacgcttctc gtgtgtgctt
    15901 tagcgatagt tttcaagggg ataaatttgc gagttatgtt acaaaagaat taaaccttaa
    15961 aaatgctgtt gttattatag atcaaagtaa tgtttattct ttaggacttg caaaagcttt
    16021 tgaaaaatct ttaaaagaga atggcggtaa ggtgatcaaa aaacttgcaa tcagttcagg
    16081 cgataaagat tttagagctg tagtttcaca gcttaaaagt ttaaatcctg attttgttta
    16141 tatgccaatt tatcatcctg aagctgctct tattgctaga caagctaaac aaattggttt
    16201 tgataaatta ttagctgctg gagatggggt taataatcaa acttttatag atttgggctc
    16261 aactgctgta aatggagtgg tttttacaga tagttttgac tcaagtaacc cttctactgc
    16321 tcgtggtaaa acttttatca atgaatatga aaaaataaaa ggcaatgcaa atcttccagc
    16381 tttttcagct atgggtgcgg atgcttatta tgtaatgcta aatgctatga atgcttgcca
    16441 aaatacactt actagcgagt gtatcaatga aaaaatccat caaacaagca attacgaagg
    16501 tgtgggtgga attattagca ttgatgcaag cggtaatgca attcgtcctg ttgttataaa
    16561 agaaatacaa gatggcaagc aagtttataa aactttaatc aatcctaagg aaaagtaatg
    16621 aaaaagaaaa taattttagc agcagctttg gctttaagtt tacaagcaaa agaagtaaat
    16681 ttaggagttg ttttaccttt aagtggggca acggcagctt atggacaaag tgctttagag
    16741 ggtataaaat tagctaatga aatgcaaagt actttagcta acggagataa aatcaatctt
    16801 gttgttttgg atactaaggg agataagatc gaatccgcaa gtgctgctac ccgccttgta
    16861 aatcaagata aggtattagg acttatcggt gaaatggtta ctgcaaatac tttacaagta
    16921 atgcgcatag ctgaagaaaa taaagttcct cttatcgctc ctgctgcaac aggagataag
    16981 cttttagaaa acaaattata ttcaagtaga gtttgcttta tggatagttt tcaaggctca
    17041 tctttggcaa aatacgcttt tgaaaaatta aaccacaaaa aagctgtaat tgtggttgat
    17101 caaagtacgg attattcttt aggacttgct aaggcttttg aaaaagaatt taaggctaag
    17161 ggtggtgaaa ttttaaaaac tcttagagta aattcaggcg ataaagattt taaagctatt
    17221 gcaactcaaa ttaaaatttt aaatcctgat tttattttcc ttccgcttta ttatagcgaa
    17281 gcttctttgt ttgttaggca agcaaagctc ataggtttaa ataccccaat gggttcagct
    17341 gatggggttg cagatgctac ttttattaaa ttagcaggca atgcaagcga aggatatatt
    17401 tttacagata gctttgatgc aaacaatcct acaacccagc taagtaaaga ttttatagct
    17461 aaatacgcaa aggaaaatca aagtaaagag gttccaaatt ttacagctat gggagcggat
    17521 gcttattttg taatgtttaa tgctatgaat gcttgccaaa atacacttac aagtgagtgt
    17581 attaatgaaa aaattcacca aacaaacaat tatgaaggag tttctggggt tattagtatc
    17641 gataaaagcg gaaatgcaac tcgttctgtg gtagtgaaag aaattaaaaa tcaaaaacaa
    17701 acttataaag atactataaa tccttaggaa aaatatggac tctactttat ttttacaaca
    17761 acttgttaat ggtcttagtc taggcagtat gtacgcactt attgccgtgg gctataccat
    17821 ggtatatggt gtattaaggc tgatcaattt tgcacacggt gatattatga tggtgggtgc
    17881 ttatatagcc cttttgttga taaatttttt ttctccaatt atcaatcatt taaatcaaac
    17941 tttttttggt agcgatgagc ttggaaaata tcttgttgtt atttttgcag ctgcacttgt
    18001 ggcttctatg atcttttctt ctattgtggg aatattgata gataaaattg cctataagcc
    18061 tttaagaaaa gctcctagaa tttcattatt gataactgca atcggtatta gctttttttt
    18121 acaaaatctt tttaatgtga tttttacttc aaccgaacag caatttccag caccaccaat
    18181 atttgaaact ttggttagca taggcggtgt tagtacaact ttaggttcgt tgcttgtacc
    18241 tttagtaact ctagtagtaa tgcttggagt cctttttatt ctttataaaa gtaaatacgg
    18301 catagccatt cgtgctttgg cttttgatat acaaactgta aatttaatgg gaattaatgc
    18361 aaatagaatt attgccattg tttttgcttt aggatctgct ttagctgctc tagcagggat
    18421 tttttggtcg agtaattact attctgctta tcctactatg gggactttag ttggacttaa
    18481 ggcctttgca gcagcagttt taggagggat tggctctgta gtaggagcgg ttctaggagg
    18541 actcatcata ggattgactg aagttatggc cgtggctttc tttccagagc tttcgggttt
    18601 taaggatgct tttgctttta tttttcttgt gtttatctta ctttttagac caacgggaat
    18661 tttgggcata aattttgaaa agagtaggtt ttaaaaatgg taaaaattaa aatttcagct
    18721 ttagtttata ttgttttagc tattgctttt attatgcttg ctccacaatt ttttgatggc
    18781 tatggtattg gtatattaaa tcaaattgct atttatatta ctttagcagt aagttataat
    18841 ttaatcaatg gtgtcacagg tcagttttct ttagagccaa atggttttat agcagtaggt
    18901 gcttatgctg cggctctagt gcttttaagc tcggaacaaa aattagattt attcagttta
    18961 gaagacccaa atcctatcat tttagctttg catacaaatt ctttcatctt agcactttta
    19021 gtcgctggct ttagcgcttg tgttttatct ttaatccttg cttttgctgt ttttcgtgta
    19081 agaggggatt atctagctat tgtaacttta ggttttggta ttattatcca aaaattagcg
    19141 attaattttc caagttggac aaatggatct atgggcttaa atggtattcc tttgctttca
    19201 aatctttatt ggacaggtgg agtggcgatt atatctgtta ttttgatttt aaatttggtt
    19261 tattctaaat ttggcagggc aatgcaagca attagggatg atgaagacgc tgcgagcgct
    19321 atgggagtaa atactttttg gactaaaact cttgcttttg gaacttctgc ttttttagag
    19381 ggcgtaggtg gaggactttt ggtttgtctt cttgcctctg tttctccaga gcaatttggt
    19441 tttgaattta cttttatgtt gcttataatt atagttttag gcggcttagg ttctactacg
    19501 ggagctattt tgggagctat tttgatcata ggtggaagag agtggttaag atttttagat
    19561 gaaatgcaga ttaaaatcga ttttctaggt atcgatatgg gttctatgcc aggacttaga
    19621 atggtggttt tttctttaat tcttatttta gttatgcttt ttgcacgacg cggaattttt
    19681 ggcgatagag agcttaattc cttctttaaa agaccttcta aaaaaggact taaataatga
    19741 ttttggagct taagaatatt actaaaaaat ttggggaagt gagagctatt aatgaaactt
    19801 cttttcatat taaagagggt gaaatttttg ctctaattgg tcctaatggt gcgggcaaaa
    19861 caacactttt taatattatt acaggcaatt ataaaccaac aagcggagaa gtattttttc
    19921 aaaataagaa aattaacgat ttaaagcctc ataaaattgt gcatttaggc atagcaagaa
    19981 cctttcaaaa cattagatta ttttcaagta tgagtgtgct tgaaaatgtt atgataggtt
    20041 ttgataaaca aatgaaatat agcgttttgg aagctttttt gcatttaggt cgtttccata
    20101 gggttgagca agaatttaaa aataaagctt ataagctttt agaagaactc ggtattagtg
    20161 aatttgcaga tgagaaagct acgagtttaa gttatggtca gcaaagaaaa gttgaaattg
    20221 caagagctat ggctacaaac ccaaaacttc ttttacttga tgaacctgct gcaggtatga
    20281 attctagcga aagcgatgaa ttagcagagc ttattttaaa gcttagaaaa gactataaga
    20341 tcagcgtttt gcttatagag cacgatatga aatttgttaa taggctttgt gataaagttt
    20401 tggtgcttga ttatggtaag actatttttg aaggaaaaat aagtgatgct gtaaatcata
    20461 aagaggtaat tgctgcttat ttgggagatt ttgatgctag tagttaaaaa tttgcatgtt
    20521 tattatggct tgattgaagc agttaagggt atagatttta aagtagaaac aggtcatata
    20581 gtttctctta ttggctctaa tggagcagga aagacttcta ctctcaatgc gcttttaaat
    20641 gcagtaaaac gaactggaga aataaatttt ttaggttatg atacaaaaag gcatctaact
    20701 catactttgg tgcaaaaagg tatagcttta gtgcctgaag gaaggcgcgt ttttatcaat
    20761 cttagtgtcg aagaaaattt aaaaataggt gcttataata atagtgaaaa ctatgagcac
    20821 ttaagagagc aaatgtataa gttatttcca agacttgcga gcaaaaaaca tgctatggca
    20881 ggaaatttaa gtggagggga agctcaaatg cttgctattt caagagcttt gatgagcgaa
    20941 cctaagcttt taatgcttga tgagccctcg cttggacttg ctcctaagat agttggagag
    21001 gtttttgata tcatagtgcg tttaaaggaa gagggcatta ctatactttt agtggaacaa
    21061 aatgcttact ctgcgttaaa gataagtgat tatgcttatg ttttagaaaa tggacttatt
    21121 gcaatgcaag gtgaggctaa aaaactcata ggcgatgaca atattagaaa aaaatattta
    21181 ggattatgat acagaggtta ggatatgaaa aatattatta aaagtgtggg tgatttaaga
    21241 atttctatag ttttattttt gctttttgct ttatcttgtg gcttggcaac ctttatagag
    21301 agtgcttatg gtacacctac tgcatgggca atggtatatg atagtttttg gtttgagtat
    21361 atacagcttt tgttaggcat aaatttatta tttggaatgt ttcgttataa gatgtttgct
    21421 ctaaaaaaaa tgcctttgat gatttttcat ttttcttttc tttttatctt gcttggctct
    21481 gctatgactc gttatggtgg ttttgaaggt ttattagcga ttcgagagca cactcaaaat
    21541 gctttagttg aaagctctaa aacctcttta agaatttcta ctattaaaga tggcgagcgt
    21601 tatacttccg taaatgatcg ttacatagga aatttacctt ttgcaaattc ttttaaatta
    21661 aatttaaata tgggagatga aaaagctgtt ttaaaatatg aaaatttaat tttagatgca
    21721 gattatactt ataaagaaga taatgtttct tcacccttgc ttgttttgac tatttctgaa
    21781 aaaaaatccc aaggtgcgaa tttggaattt agatcaggag aggtacaaaa tatcaacgga
    21841 attaattttg cctttatgaa tgatgatgtg gctaaacctt atatcaaaat agataaaaat
    21901 ttaaaattaa gctcaagtga aaatttaagc gtttttaaca tgaaaaaagg cgagaattca
    21961 actcttaaaa ttggcgaaaa ggcagatgct aaagatctta gattatatag tttggataat
    22021 ttaaattttg tagtgaaatt tgcttcttta catggagctc aagaaattca aggtgttaac
    22081 aggccgcaag atgaaagctt ttggctatgg tttaaatcag cttggttaga atttgcaaga
    22141 actataatga tatcaagctt tggggagcca caaaactgga aagcttcatg gcttacaaat
    22201 tttaaagatt ttgctatgag taaggattat caagctttgg aattaaaagg agcacatgcg
    22261 ctaaaacttc aattagatta taagaatgaa agtaaagaat tttatgtatt tgaatacaat
    22321 aaacctaccg tagtagaact tgctgggcaa aaattcttta tttcttgggc gcttgcatat
    22381 gagcaattgc cttttgaaat ttatttaaga gattttgtta tagatcgtta tcctggatct
    22441 atgtctcctg cttcttatgc aagtgaaatt acggttaaaa ataatgaaga taatttcgat
    22501 tataggattt tcatgaataa tgtgttagat tataagggtt atagatttta tcaaagttct
    22561 tacgatcagg atgaaaaagg gacgatatta tcagtcaata aagacccggg taaaattcct
    22621 acatatatag gttatttctt gctttgttta ggtatgtttt taaatttctt aaacccacat
    22681 tcaagattta gaactctagc aagacttatc aataaagacg ctctgaagca tactgctagt
    22741 gttttggctt tatttgtagc tttatttgga gcagataaaa tgcttgctca agatttaaat
    22801 ataagcttag agcaaaatat acctatagtg gataaagcac atgttaaaga gcttaaagcc
    22861 cttatcgtgc aaaaatctgt agatggtaga atgatacctt ttgatacttt agctagagaa
    22921 attttggaaa aaattcataa gagtgcagac tataaaggac aagaagcaag cgctataatg
    22981 ctttcaatgc ttatcaatgt agatttatgg caaaatgaag cctttatttt aatgccaagc
    23041 aataaaaatg ttcgtgaggc tatcgctgaa attttagaaa tttctccaga attaaaatat
    23101 gtcaaatata aggatttctt tgatgctaat aatcgttaca aacttcaaaa atatgtggaa
    23161 aatgctaacc gcaaaaaccc aaatgctaga ggggtatttg ataaagaaat catttattta
    23221 gatgaaagag caaatgttgt aaatttggtt tttagtggag aactttttaa atttattcct
    23281 atacaaaatc atgacaataa tgcatggttg gctccttttt ctgctattac aacacttaag
    23341 gatgaagagg gtcagtttgt ttttacactt ataaaaaatt atttttcttc tgtggactca
    23401 gcttttcatg atggaaattg gacaagagct aatgaagctt taggttttat caaacaatat
    23461 caagagaaaa tagggcatga ggttatgcct aataaaacaa aagtagagat ggaaattttt
    23521 tcaaataaag ctgaaatttt tgtcaaactt gctcctgtat atttaatcgc gggattttta
    23581 ttgttgattg ttcttttgat taaaatggtt gcgccaaaac ttaaaatttc tcttatattt
    23641 aaagtcattt atattttaaa tattttagcc tttatagtcc atactgtagg acttggattg
    23701 cgtgcttact tagcagatca tgctccttgg agtaatggat atgagagtat ggtttatata
    23761 gcttgggctt tatctctttc aggaattttc ttttctagaa aaagtccgat tgctttatct
    23821 ttgacttcta tacttgcggg tattgtttta gctgtggctc acttaagtga gatgaatcca
    23881 caaattacaa atcttatgcc agtgcttaat tcgtattggc ttagtatcca tgtgtcagtt
    23941 attactgcta gctatggatt tttaggactt tgttctttgc ttggaatttt tactttattg
    24001 ttaatgtgtt ttttaaaaga aaacaatcaa tacaatcaaa gtattttaag aaatatcaca
    24061 gaagcaactc gaattaatga aatgtcaatg atttttggac tttgtttgct tactgttgga
    24121 aatttcttag gtgcaatttg ggccaatgag agttggggta gatattggag ttgggatcca
    24181 aaagaaactt gggctttggt aagtattttg gtttatgcgg ctattttgca tattagaatg
    24241 attccaaaat attctaatca atttaccttt gcattatgga gtatgtttgc ttattgggtt
    24301 gttattatga cttattttgg agtaaattat ttcttagtag gtttgcactc ttatgctgca
    24361 ggagaagctg ttcaaattcc tagttatgtt tattggggag ttgtgattat gattgtttta
    24421 gcattacttg caagaagaaa gcgtgagttt gtaggcaaac tttaatgagc catatttttt
    24481 gggtgattat ttgcacctct ggagctttgc tcctcttttt gagtttgata gcttatttga
    24541 ttctcagtga taataaaaag aaaaataaaa aacaaaaaaa tactgagaat acagctaaag
    24601 cccgcaaatt tgataatgat ttaaataaga tgatagcagc ggcgagtgat ttaaaatata
    24661 gcgatcgtga tttaaaggag ttggtaaagc tctttgttca aacacataag ctaggctcta
    24721 aaacttctaa agaattagat gaaaaaacaa aaaataaatt agaatttgta tccgctttag
    24781 ctgctaaccc aaaagctagc cctcaaactg taagtttttt aaatcaagag cttaaaaaaa
    24841 tttctgcttc ttacaaaaaa gaaatcgatg cctatgagca gatgggttta gcaaaaagaa
    24901 aaatcaaaga agagaaataa aaccagattt aaatttttta agcgtatgtg tttttaaaga
    24961 aattacaagc aattatggtg gagtttatat tttgataaag agataagaga agagatatta
    25021 cagagagaaa gcatatttta aaggcgctaa aggacgagag tttgggtgat gatatttgag
    25081 attggttgca agatgcaagc agaaaatatc ttgttgtttt acataccatg ataaattata
    25141 gtgtagaaag ctatggatta tttggagatg aaagagaggt gggtagcttt acaagcgtag
    25201 gacacaaagg tgttgatggt ggataagtta aaacaaaatt ttattatcac atctaataat
    25261 tacgcggaca aaaatatgcc tatcaaggag taagtatgcg tttttataaa atgcttctgg
    25321 ctttaatctt aagtacaaat ttagccaatg cttatgatac tactattatt tataatgaag
    25381 ataaacctat ttttaaactt gatttttaca ataaaggaga aaatacggtt tttttggtga
    25441 aactgttgcc tcttcctata ctttaaatga gatccaaaga aatgaaatca ttcgtgcgac
    25501 tcaattttgg gctaatatta taggagctag tgcaatcaat tcttccccca ttcctatcag
    25561 tgtaagtacc tttgatattc caaatgccaa tgcattatct tatgatttct tttctaatcc
    25621 tatatttaat agggtattgc aaggagaaag tatagatact attagacaag aacttatagg
    25681 tgtatcagaa gattttttta ctaaagcaag tgtagaatac ttagggcata ttaatatggg
    25741 aaagcttgat tggtatatag ctttctcatc ctactaccct acctaaaaat gggaatcagt
    25801 ttgatacttt ttctaccttc acccatgagc tttttcatgc tttaggcgtg ttatctttag
    25861 ctggtagttg tggaggaaat ttgggacaat gttttaacgg ttttttaaac agttttagtg
    25921 atcatttata tgatcttaat ggagtaaaag ctcaaatagg aatgagaata gttaaaaccc
    25981 aagcagaggt agaagaagct aagttaaaag gagagacggt tttcttagtt aaggacgatg
    26041 gtgtttatat taatggcagt tttagcaatg cttcgggcaa tgtttatttt aaaggagaaa
    26101 atgtcgcaga agttattaaa aatgctaaac taggttatga tggggttaat ggtattccta
    26161 tcaatgcttg ggaagggatt atattagata tgtctcatat tgagcttgat aattctttaa
    26221 tgagtcatca aagttggcgt aattataact tctatatgga agcagaatta gccttgcttc
    26281 aggatatagg ttataatttt gatagaaaac tttattatgg agattctatt tacgaaagca
    26341 atcttttaaa ctggcaaagc gatcatggtt attatgctag aaaagatggc aaatggctta
    26401 taggagaata caatcctaca gaatacggag tgagtttgca tatctatagt aaaaataata
    26461 tagccactca aagccatgat attttatcaa gtggcgtagc tgcaagtggt attcgtatag
    26521 atggatcgaa taaccaattg attatagcca atgatactaa ggtttatacc ttaggggatt
    26581 attctaatgc tttattaatc gcttatggaa aagatcatgt tattgaacat aatggagaat
    26641 taaaagctac aggtaaagag ggtatagcca tcaatataga ttttggggat aacactctag
    26701 gcaatgctga agaataccgt ggctcttata tacatcaaat gtctggtaat aatcaagacg
    26761 atcttgcgga gtataaccta gatggagcct tggttaaaag cttaaatctt aatgctgcta
    26821 gctctactat aggttcttta gcttccattt atatagctga taatgcttat gtaaacacta
    26881 tcaacatagc acaatgggct aaggtagaag gagatattat ttctaattgg gatcctaata
    26941 atgaaaaatt agcaaatcaa tacaaagata gcttttatac agatcttaat tttggttctg
    27001 actctagctt atcaagagct gctttcaatg ctttagataa tacttggagt gttaaagcta
    27061 atgtattagg ttatgataat tttaaaatga atgttaatga gaatcttaat ctacaaggta
    27121 gtgcttttgt ttatgattta aacaataaag cccattttag cctactcggt gcagatggca
    27181 tcaacccttc tttattatat attaaaaaca atttcactca ggattcaaat gctatcctaa
    27241 ctgcaggtat taatgctaat ggacaaagtc tagtatatgt aggaggtaat gctaatttag
    27301 caggagcttt taatttttac atgttaaaag acttttataa agataaagta gtgttagatc
    27361 ctgatttaat tagcgcaaat caaattcaag gtgcttttaa ttctattgtt tatgatagta
    27421 gtcttgattt ttctcctact ttaaatttta tctatgatgc aaatacaaaa gaattaggag
    27481 ttgttcgtga ttatactcct tatattaaaa attcaagcga tatttcttta gcttatgctt
    27541 taaattcttt aaaaatatga agatattgct ttgcttttta aagaattgga ctttgctaca
    27601 gatgcacaaa ccatagctca gggtttaaac gagcttaatg ctaaagctta tttagacagt
    27661 gctaaaattt ctttagattt ccaagaggag ctcaataaag aagccctaag cgaatatgcc
    27721 aatgaatggc aaagcttcgt aaccccattt ggaacttatc aaagctcaag agctaatgga
    27781 gattttgatg cttataaagg ctatggaggt ggagtaaagg caaagctatt aagggatttg
    27841 atagtttcaa tttaggattt aatttggtgt taaatactaa taatatagat atagatgata
    27901 ccttagctaa tacaaaaacc acaggggcat atgcaggcat tttttctaaa tatgatttag
    27961 aagattttta tcttttagga agttttagaa tgggttatga gcataccaag cttaatagaa
    28021 atgtaaacat aggagctttt agtgcaaatt ataattctaa gtttaattct tatcttatta
    28081 gtgaaatggt aggtataggt aaaagcttta atcactatgg ggtaagctat ggacctttag
    28141 cttatataga acacagcttc ttatatcact tcgctatcaa tgaagaaaat cagaactcta
    28201 cagctttaaa tattgattct aaaaatttcc atgctttaaa ttcttttatg ggatttaatg
    28261 taaattatga aaaaggtatg agtgacaaag ctattgtgaa tttttatttc ttgggtggat
    28321 ggaatcatta tttcttagac tctttaaaaa acaatgccag ctttaaagat gcaagtttaa
    28381 ataaattcta taccaaaagc aaactaagca atcaagattc tttataccta caaggagaaa
    28441 ttgattttac tcataattaa tctttcttta caagattaat gctttcaagt gatattaaag
    28501 ataatataga ctttagcacc aaacttgaag taggagctaa gttttagtaa aacacaaaaa
    28561 aataaagcct tgtgattatg atattattag gctttatttt atacttttaa acttaaattg
    28621 ttttttgttg atctttgttt tatatttatc ctttttaaat tttcaagtaa tctttgctaa
    28681 tgtttaaaga gttttagttt ttgcaaattg ctatatataa aagtaaggat tttaaagcaa
    28741 taaaagctat aaaagctact taaagattat atttataata caagaaaaga taaaatcatt
    28801 tatttagact tgcaaagtga tgtagaaaag tataaaagag aatgaaaatt ttttaaatac
    28861 agcttaattt ttaattgttt atcgttgata atctttcatc tttttataag catataaaat
    28921 atatgtaaat tcttagaaga aattttttgc acatattttt gaattgatca aaagatatta
    28981 attaccattc ttacaaagtt ttgatttatt ggcttttatt tgttaagtga gataaattga
    29041 tataagaagt aatggtgcgc tcaagaggat tcgaacctct gaccttttga accgcaatca
    29101 aatgctctat ccagctgagc tatgagcgca tctttttgta tttttaaaga tgtaattgta
    29161 taaaaaattt tcttaaaatt aggttatttg tttaagattt tatcttcaaa ttctaattct
    29221 ttctttcttt ttttgcgata aacgattaag ccacttaata aaataaaaca tataagagca
    29281 aaaacatacc aagttgcatg tttaacattg cttaaaaaca aatcattagt attcatacca
    29341 aaaaaaccta ctatcagatt aagaggtaaa aatattgcag ataatatgct taaaaaatat
    29401 aagctttgat tcattttttc atttttaatt gcactcatta ataaatgaag ctcgtttaat
    29461 ctagtaataa tttctttgtt gttttttaat gtaaccccga cagcaaagat aataggcttt
    29521 aaagcttttt tatgcgggct tgtccctgct aataaattca atgcctcatc aagcaaggaa
    29581 aggtttttta aatttttatt gattttttgt tttaggataa aacttttttt aaagaaattt
    29641 ttgatcaaat tgccttttaa aagtatattt tctttgcgtt ctaaaatgcg ttcaaagtaa
    29701 gcattttcat ttttacaatc ctctaaaata gcccgaatgg tgcttaaaaa atcatttaaa
    29761 gaaaaaggtt taaattgagc attttcaagt ttgaaaattg tatcatcctc aaatccaaaa
    29821 acactgaaat tcgccttttt tgtttttgag ctgtaagaat ttaaaatcaa aattttttgc
    29881 cctaaaaaat ccatatataa agtatttaaa tttttatttg caagaaattt gcttaaattc
    29941 tcatcgcata ccattggtta gccttttggc gtaaaattcg tatttgaatt ttttaaattc
    30001 agactttttt atcgcctctc gtgcttgcgc tactaaggtt aaataataat gtaaattatg
    30061 caaactagcc aagcgaaaaa aggttaattc tttagcttta aaaagatggt ttaaatatcc
    30121 gcgtgagaaa ttacgacagg tatagcatga gcattcatta tcaatgcttt catgatcgtt
    30181 gataaattca gctcttttga tattaaattt gccaaaattg gtgaaaaaag ttccatttct
    30241 agcatttcta gtaggcataa cacaatcaaa catatccacc cctcgctcta tgttttcaac
    30301 caaatcctca ggagttccaa cccccataag gtagcggggg cgattttcat ctaaaaaagg
    30361 gtttaaattt tccacagttt catacataag agcattttct tcacctacgc taagtcctcc
    30421 tatagcaagt ccatcaaaat ccatttcatt aagggctaaa gcacagcgtt tgcgttcttc
    30481 ataatcagtt cccccttgta tgattccaaa aatattttgt tttagaccta gtccttgaat
    30541 ttgtatttgt ttgtgataat caatcgcttc ttttgcccat tttatagttc tatctactga
    30601 aactttaatg cgttcttttg tagcaggaag ggcgataaga tcatctagta tcatcatgat
    30661 atcactattt aaatcatatt gagtatctaa tacgctttta ggagtaaata aatgcttaga
    30721 accatctata tggcttttaa attctatacc ctcttgaaaa tgtttagaat tagcagaaag
    30781 tgaaaaagct tgaaagccac cactatcagt aagaaaactt ctatcaaatt ttgtaaagcc
    30841 gtgcaaacca ccaaaatgtt ttacgatttt agaaccaggc cttaaataca tatgataagt
    30901 gtttgctagg atgatttttg cattaagttg ttctttaaga tcaattgcat caaggctttt
    30961 tacagcgcct actgtgccta ctggcataaa aataggggtt tcaaaagtgc tatgagctgt
    31021 tgttatctca catactctag ctaggttgtc tttatgcttt aatttaaatt ccatttgtta
    31081 taatttcctt tttggagtgc aaaatgaatc atattttaat aataattgat ggtattttag
    31141 caaagcattt cttagaaagg ctttgttttg aaaaaggctt gggatatttt tttaccatag
    31201 tttgccaaaa tgaagaaaat ataaatttag gtgcaaatag cgaatatatt gaatttcatc
    31261 attttgatcc cactagcaca gcccgccttg aaactcttat gaataaatct ttcaaacaag
    31321 cttttatcta tatgcaagat gaatttgaaa ctaaaaaaac ctacgaagct ttgcgttctt
    31381 tagatgcaaa tttagagatt gagatcatgg atttttgggg tttgaatatt aatgatgttc
    31441 atacaaattt agccgatgct agaatgactt tgagccgaag atttatggat tttttgcctg
    31501 atattgcttt aacggcttat tgtgttggat tgggtgttgg ggaggttatg gaagttaaaa
    31561 ttcctgcagg gtcgattttt gcatacaggc atattagctc catacagcaa aaaagatggc
    31621 gtatagtact catttataga aattctaaaa tttattttgt taagccatct tttgttttac
    31681 agcctaacga cagcatttta atcgtaggcg atcccgctgt tcttcaaagt atttttcaca
    31741 atatcagagg taaagcagga caatttccac ttccttttgg gagcaatatc ttcactctta
    31801 ttgatatgaa aaaaatgagt gaagatacac aagaaagatt actagatacc actttgcaat
    31861 tggttaaaaa aagcaatgct aagaaatttt ttataagggt gcttaatcct aaattgggtg
    31921 ctttatatga taaaatgaag caactttcag atgagcaaga aagtatattt tttgattttt
    31981 ttaatacaga ttttgcaaat ttaa
//
LOCUS       DAQUWA010000012        30045 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.012, whole genome shotgun sequence.
ACCESSION   DAQUWA010000012 DAQUWA010000000
VERSION     DAQUWA010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30045
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.012"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            12..782
                     /locus_tag="R8X70_000473"
     CDS             12..782
                     /locus_tag="R8X70_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEF2928283.1"
                     /translation="MKKFLTAFLVAFTGLFLVACQNTKTENNASNEANTTLTLKVGTA
                     PNYKPFNFKQDSKLTGFDTDLIEEIAKKNGIEIVWVETNFDGLIPALKSGKIDMIASA
                     MSATDERRQSVDFTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGTLQENTAKA
                     IKNAQVQSNKDLNIAVLALKNNKIDAIVADQDTAKGFLAENPELVSFYQETDGGEGFS
                     FAFDKNKQKDIIEIFNKGIDEAKTDGFYDTLIKKYELE"
     gene            complement(806..1444)
                     /locus_tag="R8X70_000474"
     CDS             complement(806..1444)
                     /locus_tag="R8X70_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEF2928284.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQK
                     QYQEKKLDMDEFMTFFLQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRC
                     IIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLS
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF"
     gene            complement(1441..2430)
                     /locus_tag="R8X70_000475"
     CDS             complement(1441..2430)
                     /locus_tag="R8X70_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928285.1"
                     /translation="MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVTKPDLLLLDEP
                     LSALDAKIRKHLRVQIKEIQKELELTTIFVTHDQEEALELSDRIILMNEGKIIQNSNA
                     NNLYLLPESHFVASFIGNYNILSPKELDSLGLKHDFKKDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYRVRVQEIEFKVDTLNFSTHSTYEAGDKIALKFNLSLAKELK"
     gene            complement(2434..3213)
                     /locus_tag="R8X70_000476"
     CDS             complement(2434..3213)
                     /locus_tag="R8X70_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2928286.1"
                     /translation="MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSV
                     LPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAF
                     VNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWILIFTYFTIALPFIYRALDNAMSNV
                     NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIVYFVLIFITTFIASLIKE"
     gene            complement(3214..4053)
                     /locus_tag="R8X70_000477"
     CDS             complement(3214..4053)
                     /locus_tag="R8X70_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEF2928287.1"
                     /translation="MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSL
                     ANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLLASYSLFVLAPSKICKFLFSLNT
                     MISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIIITIIMLVVTFIANFLSKKYHF
                     KVL"
     gene            complement(4050..4859)
                     /locus_tag="R8X70_000478"
     CDS             complement(4050..4859)
                     /locus_tag="R8X70_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEF2928288.1"
                     /translation="MMSKVILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELP
                     SMSRPLYECLLTGVKPVLSGIINNKLSFSKQTSIFDLCKEQGLKAGGAAYHWVFELYN
                     KKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNI
                     DDAGHKFGSHSIEYANKTKKVDILISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSE
                     DEILVPFFTFGSAFSYENAKIKQDEICGSICEILGLKHDKRYNDEILKAKK"
     gene            complement(4856..6181)
                     /locus_tag="R8X70_000479"
     CDS             complement(4856..6181)
                     /locus_tag="R8X70_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HEF2928289.1"
                     /translation="MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAP
                     DFFKTYGKFANITREEKIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVI
                     SDNGLGKKYNSYDAMLYAHEFKFDFKNSKYELLKTVFFKDSDKKYPYPITTETTKERY
                     LSGVDFDTESIQVINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSL
                     KFSDKPDGENEKFNIKRSKGFEAMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRI
                     IEFDVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQKEGTKDKTCKEGED
                     TKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFE
                     TIEGVDIVDDSHIVVENDNNFPYSSSREPNKTDDNEFILLEVKDFLKSK"
     gene            complement(6192..7238)
                     /locus_tag="R8X70_000480"
     CDS             complement(6192..7238)
                     /locus_tag="R8X70_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEF2928290.1"
                     /translation="MSKKFFLSLGLVALLFSNSQAIDENLIKAAQAEGRVNSLAMPDT
                     WANWKDTWADLKNLYGIEHSDTDMSSAQEIAKFKAEKKNASGDIGDVGASFGEIAVKQ
                     GVAQPFKTSYWDQIPTWAKDKDGNWLLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNYK
                     ITVGDVSVAAQAVSAVLAANYALGGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTTIINKYAKHPNAAKLARE
                     FILSDKGQINLAKGYARPIRIDHITLPDDIKAKLLPSEQYKNARAIKDQKAWEKSAKE
                     LPQLWQEKVIVDMK"
     gene            7355..8338
                     /gene="corA"
                     /locus_tag="R8X70_000481"
     CDS             7355..8338
                     /gene="corA"
                     /locus_tag="R8X70_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HEF2928291.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSVAEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLVRDLKSDEEDRNLIKLRTEI
                     VTFATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLE
                     WIDKEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKIIKIFTVATVA
                     MMPPTLIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
     gene            8359..8901
                     /gene="mog"
                     /locus_tag="R8X70_000482"
     CDS             8359..8901
                     /gene="mog"
                     /locus_tag="R8X70_000482"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HEF2928292.1"
                     /translation="MDIINIGILTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKMMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIAECLEPVFPAIPYCIDLIGGA
                     CIEGNDEVIQVFRPKKKCQN"
     gene            complement(8898..9083)
                     /locus_tag="R8X70_000483"
     CDS             complement(8898..9083)
                     /locus_tag="R8X70_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HEF2928293.1"
                     /translation="MFFKKKISQKQKEKPKIPINDVILDDRLCKFKNKVQKISKDEAS
                     ASLLARQLSRLVRANKF"
     gene            9212..10399
                     /locus_tag="R8X70_000484"
     CDS             9212..10399
                     /locus_tag="R8X70_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEF2928294.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEREKDKQAQILSEKDYQNA
                     ADIAIENEKFKLFSNFYMLIVNIAWIGFGFLYLKELLISENSRLENTLFLLAFLIITS
                     ILNLPLSIYESFVKDKAHGFSNMTLKLFIKDTIKSLILTLIFGFLILYALLFCYDFFG
                     TFWWLAAFIFAFCVIVIINVIYPTLIAPIFNKMEKLEDENLLSKINDLMKQCGFNANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALSERELLAVLGHELGHFVHKDII
                     KALINGAITMFLLFFIFAHLPDFVYQESHLEGVNGGVFALLFIFANIFSFIISPLINA
                     LSRKNEFAADQHGSKLTSKEDMKNALLALARENKAFIKTSKIYTFFYLSHPSISDRIK
                     ALS"
     gene            10396..11196
                     /locus_tag="R8X70_000485"
     CDS             10396..11196
                     /locus_tag="R8X70_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEF2928295.1"
                     /translation="MTIKNALIEAKTRLEKHENEALFILCEYLKKDRTWIFLNQDLEF
                     DSKPYFELIKRFQSGEPFEYIFEKADFWGLEFKVKKGVLIPRYDSEILLSQVLKICKN
                     NNFQNILEIGFGSGILSIVLAKELGIKITACDINPKALQLALENAKLHKVEHLIDFKL
                     CDFKQIKENYDFIFSNPPYIQNSYPIDLWVQNEPKEALFGGEKGYEILEEIITFSFER
                     KVKFLACEFGYDQKVILKQILYQKNFQAEFFQDEQGYDRAFVAQFAKK"
     gene            11238..11711
                     /locus_tag="R8X70_000486"
     CDS             11238..11711
                     /locus_tag="R8X70_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEF2928296.1"
                     /translation="MKAINLFLLAAMIGIELILGIVVAPVIFYPANLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSIINLLFEIYSFAKEDMKFQIKFSKLMLAILILILSLVFV
                     LYFTNTIIELQNLGEQATKSQEFLSIHNASEVVIKIILLMQVFLYFLSFKIAKKC"
     gene            11745..12494
                     /gene="flaC"
                     /locus_tag="R8X70_000487"
     CDS             11745..12494
                     /gene="flaC"
                     /locus_tag="R8X70_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HEF2928297.1"
                     /translation="MMISDASMMQQNYYLNNAQKASEKALENIAAVRAISGIDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALSDS
                     QKSMLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLTTSGLSID
                     NQDNITNFMDQLGALRSEIGSGINAITSNINASVQNSINTKAAENNLLNNDMAKNVND
                     FNSNYLKENAAAFVAAQSNMQLQSKIASLLQ"
     gene            12531..13163
                     /locus_tag="R8X70_000488"
     CDS             12531..13163
                     /locus_tag="R8X70_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEF2928298.1"
                     /translation="MTLEQILEKTKNIRLVAASKYVDANIIEKLFTQGITEFGENQVQ
                     ALVQKKEILDKKDLNIKWHFIGTLQSNKINLLIKQKPILWHSCNGLKIAKAMDKRLNY
                     KLDTLLEINSANELSKSGLNPDQAIEEYLQIQEECPNLNLCGVMSIGSHSKVQREIEK
                     SFETTYKIYEKLQKHGAKICSMGMSNDFEIAIKCGSNMVRLGSILFKNLK"
     gene            complement(13180..16782)
                     /gene="dnaE"
                     /locus_tag="R8X70_000489"
     CDS             complement(13180..16782)
                     /gene="dnaE"
                     /locus_tag="R8X70_000489"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEF2928299.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELAKTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMRSEGLKPIIGLEAYLHNHEDISDKSSRQRFHLCLYAKNEVGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEEHSEGLICSSACLQGEVNWHLNIHSERNVRFGAKGY
                     EAAKEAALWYKKVFGDDFYFEIMRHGIGDQRAIDDDIIRLSKELNIKIIATNDTHYTF
                     KERAAAHEVFMCIAMGKKLNDPDRLRHSVHEFYVKSPAQMSELFADIPEAIENTQEIA
                     NKCNLELNLGNPTPPNFKFTREYAKEYNISLPEEGKEFSFDNDDVVFDELCKKGLEER
                     LKFVDISKHEEYKTRLEVEINIIKKMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVAYSLKITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLARGVIRDVARVCDMSIPDADELAKLIPEELKITLDAAYEKEPKIKE
                     FIERHPKGPEVWEYAKALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTLINNAIKLIKKRYNKDIIWEAIDVNDAKVYKTIQ
                     SGNTLGIFQIESGGMQNLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     KIEYPFDTLESVLEPTYGIIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKSEFADGAEKQGYDRVKAEELWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSVNKAIREFSAVEQEDGKDAIVYG
                     LGAIKSVGIPAVENLLEARERGEFKNIDDFLSRIEPTKINKRTLESLIKAGAFDEFGY
                     TRKCLFDNMDNLTEGSKKMADARKNAASSLFGEDELTVGLQVNIVAKNEEFEVMEKLE
                     FEKEILGIYVSGHPLDRFYDKFKEIDYVKSIDFSTLKGSGEILSIGKIESFKSMMSKN
                     NKRYGRLEILDFYSTFEVTVFESNIEEIENILKNEASKNEAYGFLLSYKAEEGKLDSL
                     ALRSIKTLEELQEGEIKAVKKFNAKKNTQENKDFIAEPKEFENNIIELDLSRLNRELV
                     YEIHEIARSAHNPNEKGNKKLVLKIVSTGSCLLYHTDFVISDSVSEKIINKYAG"
     gene            complement(16982..17311)
                     /locus_tag="R8X70_000490"
     CDS             complement(16982..17311)
                     /locus_tag="R8X70_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spx/MgsR family RNA polymerase-binding
                     regulatory protein"
                     /protein_id="HEF2928300.1"
                     /translation="MKVYGIKNCNSVKKALEFLDKKALEFDFIDIKKIDLGVLENWLK
                     YKRFSEIINTAGTTSKKLGLNKDKIESLSELELKNIILENPSCIKRPVIEKDNQIYIG
                     KEYEQIL"
     gene            complement(17308..18651)
                     /locus_tag="R8X70_000491"
     CDS             complement(17308..18651)
                     /locus_tag="R8X70_000491"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HEF2928301.1"
                     /translation="MTWTKNSWKNFSIKQQPIYSNQEELNKVLNKLEKLPPLVFAGEV
                     RELQSALARVCRKEAFLLQGGDCAESFANFGAVNIRDMFKILLQMAIVLTFAGGCPVV
                     KIGRMAGQFAKPRSSDYEEINGVKLPSYRGDIINGFEFNEKARIPDPNRMLEAYYQSA
                     TTLNLLRGFAKGGLANLHEVHRWNLGFLKKSELHQQYTDISEKISQALDFMEACGINT
                     YNTPSLKEVDVYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRGLDEAHV
                     HFLSGVRNPLGVKIGPNASADDVIALANALNPNNEEGRLNIIIRMGAEKIATQLPKIF
                     SKLKKEGLNLVYSIDPMHGNTVKAGDFKTREFDKIMQEVRYFFEIAMSEGVYAGGVHL
                     EMTGQDVTECTGGASNVTAQSLEKRYETQCDPRLNADQALELAFLIADLVKKARK"
     gene            complement(18675..19088)
                     /gene="uraH"
                     /locus_tag="R8X70_000492"
     CDS             complement(18675..19088)
                     /gene="uraH"
                     /locus_tag="R8X70_000492"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEF2928302.1"
                     /translation="MLSTKKILLALISIPIFLNATEYQLSTHILDINSGQPASNVKVE
                     LYNLDQNRQWVKISEKFTKKNGRIADFLPYEKTENRSFGVYKLKFYTKDYYISHKVDS
                     FYPFVEVSFELLKDQKHYHIPITLSPFGYSTYRGS"
     gene            complement(19240..19596)
                     /gene="rplS"
                     /locus_tag="R8X70_000493"
     CDS             complement(19240..19596)
                     /gene="rplS"
                     /locus_tag="R8X70_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEF2928303.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPEFRAGDTLRLAIRIKEGDKTRIQN
                     FEGICIARRGNGVDETFIVRKMGANNVGVERIFPIYSESLESITVVRKGRVRRARLFY
                     LRDRRGKAARIKELKK"
     gene            complement(19607..20311)
                     /gene="trmD"
                     /locus_tag="R8X70_000494"
     CDS             complement(19607..20311)
                     /gene="trmD"
                     /locus_tag="R8X70_000494"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEF2928304.1"
                     /translation="MKFSFVSLFPNLLEFYFKDSILARAIQKELFQLDFLNPRNFTDN
                     IYHKVDDYKIGGGAGLLMQIKPLYNTLKFIKDSEKDPYFIFLNPSGKTFNQKDAKRLS
                     KKENIVFVCGRYEGIDERVIEIFANEVFSIGDFILTGGELPALTLCDAIARNINGVLG
                     NACSLEEESFENDLLEAPSFAKPFIFEQNFKKFYTPSEFLKGNHAKIATLKTTLASCK
                     TKFFRPDLFLEHERKK"
     gene            complement(20308..20847)
                     /gene="rimM"
                     /locus_tag="R8X70_000495"
     CDS             complement(20308..20847)
                     /gene="rimM"
                     /locus_tag="R8X70_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002803049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HEF2928305.1"
                     /translation="MSERNFIQVAKLGKTVGLKGYLKLYNLSDFIQQFKKGASFFTEN
                     GKSQLKIKHYNLANSSVLFEGYENVEAAKQLINLILYQSIEATRQTCILKKDEFFYFD
                     ILKCEVFDDERRLGKVVDILEVGDSYLFEIQSDQELIDKAYAKTFFIPYIDKYVNKID
                     IEKYSIFCTKDVFLILENS"
     gene            complement(20840..21082)
                     /locus_tag="R8X70_000496"
     CDS             complement(20840..21082)
                     /locus_tag="R8X70_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEF2928306.1"
                     /translation="MVENFLREYAKLIADYPDKIATEKIKLDENFAEIILYADKIDTG
                     KLIGKNGKMINAIKTVVSACKSKDSMSYRVTVKALE"
     gene            complement(21088..21315)
                     /gene="rpsP"
                     /locus_tag="R8X70_000497"
     CDS             complement(21088..21315)
                     /gene="rpsP"
                     /locus_tag="R8X70_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEF2928307.1"
                     /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVVKFDSERLAYWKSVGAKLSDKVASITSK"
     gene            complement(21383..22720)
                     /gene="ffh"
                     /locus_tag="R8X70_000498"
     CDS             complement(21383..22720)
                     /gene="ffh"
                     /locus_tag="R8X70_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEF2928308.1"
                     /translation="MFELVSESFKSAINKLRFVDDEKALKNALDTLKKALLKADVHHK
                     VVKDLLLLIEEDVKKNGIGQKQFLEAIKTNLENILNADGKNQGFVFATKPPTVVLMVG
                     LQGGGKTTSTVKLANYLKLRNKKVLIAACDLQRLAAVEQLKQLCEANELDLFYIENEK
                     DPIKVAQQALEKAKNSMADVLLVDTAGRLAIDEALMNELKAVKNVLNPDEIFYVADAM
                     SGQDGVKTASSFNELLGITGVILSKFDADTKGGIALGITKQIGIPLRFVGVGEKIADL
                     EIFIPERIVNRIIGEGDLATLAEKTAAIIDEKEAKKLNQKIKKGEFNFNDFLTQMESV
                     KKLGSMKSIIGMIPGLSNVASSVKDLDLDNSKEIIHIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQVEVNRFLKQFANAAKLAKRFSGKKGMDSLMQMMNQARRQF"
     gene            complement(22788..23540)
                     /locus_tag="R8X70_000499"
     CDS             complement(22788..23540)
                     /locus_tag="R8X70_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEF2928309.1"
                     /translation="MQEKAYKLLALQENISNREAKDLIDKGCVFSHGKKVVVARALMS
                     DKTKFSIVKTSKPKVIFEDENIIAINKPYAYISEELEKKFNAKLLNRLDKETSGVILL
                     CKNEDFRKICIEEFKKQRVYKSYIAVLDGILAEEIEIDEPILTIKTKNGALSKISKEG
                     LSAVSIFTPIMMQAKKTLAKIIIKTGRTHQIRVHAKFIKHGIIGDEKYAKISSDRMYL
                     HSHEIRILNYQFKAELDSSFSKLGFEIKNLDF"
     gene            complement(23521..24678)
                     /gene="waaA"
                     /locus_tag="R8X70_000500"
     CDS             complement(23521..24678)
                     /gene="waaA"
                     /locus_tag="R8X70_000500"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEF2928310.1"
                     /translation="MIFLYYILVWIAFLLCAIPLFLLSLFKPKYKYSLKARFFLFRNI
                     SQKRSDVHFHVCSYGEARSVKELVLRFDSRITTITQTGYDYAKEICNKVNYLAFENWI
                     PFWLKPSKVLVIFEAEYWLMLVFIAKLQKSKVILLNARISDNSYASYKKFRFFYKKIF
                     CYIDEVFAQSEVDKIRLEDLGAKNVKIFSNIKSKLQIFPTQKYLKPKQKLIIFASTHK
                     GEEELLLKHYKMDKQEKLIIAPRHPERFLEVEQLLHDKGLKFDKFSLLQNEDKRFNQD
                     ILLLDCLGELVNFYAISDVVVLGGSFFEGIGGHNPIEVAHFNNVLISGIYIHNQKSLF
                     QEVDNVYFCEDLKELDGIIHNYNLKAKIAQNNDLSTIIQAIQEGIDARKSI"
     gene            complement(24675..25391)
                     /locus_tag="R8X70_000501"
     CDS             complement(24675..25391)
                     /locus_tag="R8X70_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEF2928311.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSFEPKMESISKTLKDAENKIAKFNV
                     ELNNLENEIQDVENQKVQNNAHISEFSAKIKELSKKSGAVKTEKEANALKIEEDIAKE
                     QLDAANDEIVRLDKILENKELFKKELLEERAKEEQNLDEIRVSISSQMDGLEKERMNV
                     YTKKTKLVAEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVIKGE
                     EIITCPHCGRILYKEQEDQN"
     gene            complement(25401..26126)
                     /locus_tag="R8X70_000502"
     CDS             complement(25401..26126)
                     /locus_tag="R8X70_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEF2928312.1"
                     /translation="MKLIEIYNFLDKLSPFETQEIWDNSGLLLGNFNDEIHNVYLSLD
                     IDEQLIQNAEENSLFITHHPLIFKGLKDLANSAYPRAFVKEMLRKNLSLISMHTNFDL
                     SHLNTYFIEEILGFEISSKNKFLAYIDVDMSFEELCIVVKKRLNLEILRTSFCGKEYL
                     KRLAVCTGSGGDLLNEVKADCYLSGDFKYHQALEAISNHLNLIDLGHFESERYFAQCL
                     AKHLKNLPLKVIITVSKNPFQYF"
     gene            complement(26113..26976)
                     /gene="glyQ"
                     /locus_tag="R8X70_000503"
     CDS             complement(26113..26976)
                     /gene="glyQ"
                     /locus_tag="R8X70_000503"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEF2928313.1"
                     /translation="MTFSQMILNLQEFWQKQGCAIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWATAYVAPSRRPTDGRYGENPNRLGAYYQFQVLMKPSPDNIQELYLKSLENLGFD
                     LKSHDVRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKRSEYEFSKYNFEISNVDFLNQQFE
                     NTYKECKSILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKTCA
                     EIYKKNLDETD"
     gene            complement(26978..27532)
                     /locus_tag="R8X70_000504"
     CDS             complement(26978..27532)
                     /locus_tag="R8X70_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HEF2928314.1"
                     /translation="MQTYLELQEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAN
                     QGTFSVVPSASNSKPAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLDALKNEN
                     KFLKDALYSMQELYDEDRKTIETLNHELKHAREEIEFLKRKYKLMWSKTAEIFGARTE
                     PDLEMKKDENSSTANEKLNENKEG"
     gene            complement(27545..28039)
                     /gene="purE"
                     /locus_tag="R8X70_000505"
     CDS             complement(27545..28039)
                     /gene="purE"
                     /locus_tag="R8X70_000505"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEF2928315.1"
                     /translation="MKFVSIMMGSKSDYEIMSECAKTLEKFGVKYELIISSAHRSPKR
                     TQEYIKEAEEKGAKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMPGSALASMDSLFSTV
                     QMPGGIPVGTLAVGKAGAKNAAYLAMQILALNDETLAKALKQDRKNQEENLISDSKSV
                     EVLL"
     gene            complement(28036..29292)
                     /locus_tag="R8X70_000506"
     CDS             complement(28036..29292)
                     /locus_tag="R8X70_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEF2928316.1"
                     /translation="MIIPEIVAPAGNFAKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEEAIEYTHQRGKKVYVTLNGFHLGGQIESLKKHILKLKEMKPDAFIVASVGAM
                     ALVRELAPEIALHVSTQANVLNYLDARVYKNMGAKRVVIARELSLKDAKSLKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGVLFRLEE
                     DENGTHVFNSKDLNLCSYIEKIMKEDCISAFKIEGRTKSEYYVALTTRTYKMAIQDVL
                     EGKFEASKYEKEIATLKNRGFTDGYLVSRPLEKADTQNHDTSIEEGTHQVHAIVEDGE
                     YFKCKGKVVLNKAYEILMPLGDEIETCDNKLGKIYKKEDKYFVEFKKLISKNNKEFNE
                     IHSGNENEIKMPNKISSFSFLRKEIG"
     gene            complement(29289..29993)
                     /locus_tag="R8X70_000507"
     CDS             complement(29289..29993)
                     /locus_tag="R8X70_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEF2928317.1"
                     /translation="MTQEELDALMNGDVNFDEDAESNIKSETESHNIESEEGLMLEDV
                     KVSDYKPDPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSEN
                     LFSEIDKVLAKNIEIFSKLNEKFPNVVSFNEALQLNLKVKKTSQEIIDKLQCGQDEVM
                     MAMDAMQYQDIHRQKIERVINVMRALSRYMSSLFEGRIDDKKRVSSAVHIEGDSTTDI
                     VSNDDIEALIASLGQK"
BASE COUNT        10142 a         5407 c         3945 g        10551 t
ORIGIN      
        1 aaaggaaaac aatgaaaaag tttttaaccg ctttcttagt tgccttcacg ggcttatttt
       61 tggtggcttg ccaaaacact aaaacagaaa ataatgcaag caatgaagct aatactacac
      121 tcactttaaa ggttggaact gctccaaatt ataaaccttt taattttaag caagattcta
      181 aacttacggg ttttgatact gatttgattg aagaaattgc taaaaaaaat ggtattgaaa
      241 ttgtttgggt tgaaaccaat tttgatggat tgattcctgc tctcaaatca ggtaagattg
      301 atatgattgc ttcagctatg agcgcaactg atgaaagaag acaaagtgtt gattttacca
      361 aaccttacta tatgagtaaa aatctttatc ttaagctaaa aaacaacgac tctcttcaaa
      421 caaaaaatga tttagaaggc aaaaaaatag gagttcaatt aggaacttta caagaaaata
      481 ctgcaaaagc tatcaaaaat gcacaagtgc aaagcaataa agatttaaac atagctgttt
      541 tagcactaaa aaacaacaaa atcgatgcta ttgtagctga tcaagatact gctaaaggtt
      601 ttttagctga aaatccagaa ttggtaagtt tctaccaaga aacagatgga ggagaaggct
      661 ttagttttgc ttttgataaa aataaacaaa aagatattat tgaaatattt aacaaaggca
      721 tagatgaagc aaaaactgat ggattttatg atactttaat taaaaaatat gaattagaat
      781 aagcgtgaat tttcacgctt atagcttaaa aagttaaaat ttcatatttt ctctcttttg
      841 caatttttaa aattttttca tcgccattac atacaaaggc tttgctaaca gactctagta
      901 aaggtaaatc attgatagaa tcactaaaaa aataagaatc tttcatccat ttttcataat
      961 ctttactcaa atattcctta agtcttaaaa ccttgccttc cttaaagcta taaatcccgt
     1021 aagcttttcc actaaattta tcacccacac gctcgcattt tatggctatg ctttctctca
     1081 ctcccaaaaa agaggcgatt tttctaacta aaaattcagc cgtagctgaa attataatac
     1141 acctttgatc ttgatatttg attataagtt ctttagcttt ttcataaggt tttatataaa
     1201 tttttataaa ttcatctact aaagatgaaa ttctatcttc atttttaccc ttaacacttt
     1261 gaagaaaaaa agtcataaat tcatccatat caagcttttt ttcttgatat tgtttttgat
     1321 aaaaaacgat tttttctaaa tattcttgag gtaaaaaacc tttttcaaca caaaatttaa
     1381 gccaaagttt agcactatcg ccttgtatta aagtatcatc taaatcaaat aaaacaagct
     1441 tcattttaac tcttttgcta aagaaagatt gaattttaaa gcgattttat cacctgcttc
     1501 ataagtacta tgagtgctaa aatttaaagt atctacctta aattcaattt cttgcactct
     1561 aaccctatag cgtatgatat tacctagcaa tgatttttct ttgatcttag cctctaagcc
     1621 ttcgttagaa atttctatgg tttcaggacg caaggctata tcttttttaa aatcgtgttt
     1681 taaacccaag ctatcaagct ctttagggct taaaatattg taatttccta taaagctagc
     1741 cacaaaatga gattctggca aaagataaag attgtttgcg ttggaatttt gtatgatttt
     1801 accctcattc attaaaataa tcctatcgga taactctaaa gcttcttctt gatcgtgcgt
     1861 tacaaaaata gtggtaagtt caagttcttt ttgaatttct ttaatttgca cccttaaatg
     1921 cttacgaatt ttagcatcaa gtgccgataa aggctcatca agcaaaagta aatcaggttt
     1981 agtcaccaaa gatcttgcta aagccactct ttgcatttgt ccgcctgaaa gcttatgtgg
     2041 ataagtttta gcgtattctt caagctcgac gagttttaac atttttttca ctcttttttc
     2101 tatgtccttt ttatccattt ttttgatctt taaaccaaaa gctacatttt caaaaacgtt
     2161 aagatttgga aaaagagcgt aattttgaaa aaccatacct atatttcttt tttgaggact
     2221 taatttagta agatctttat catttaaaga aatttttcct ccattaattt ggctaagccc
     2281 tgctatacac cttaaaagag tggattttcc acagccactt gggcccaaaa gggttataaa
     2341 ctcacccttt ttagcactaa aattaatatc ttcaaaaata attttatccc cataagcttt
     2401 tttaaaattt ttaatcttta aataagccat tttttactcc ttaatcaaac tagctataaa
     2461 agttgttata aaaattaaca caaaataaac tattaccaaa gcactagaat aatgcccact
     2521 ttgatttttg atattataaa gataaacttg caaagtctca taagcacttc ctacaagaat
     2581 atttgcgtat aaaaattcgc ctattaaaaa agaaaaactt aaaaaaactg ccaccaaaat
     2641 tccatttctt aaattaggca agacaagctt aaaaatcgct cccattaaag aacctccaag
     2701 catagcatta gatgcgatga gttcatttaa attgacatta gacatagcat tatctaaagc
     2761 cctatatata aaaggcaaag ctatagtaaa ataagtaaaa atgagtatcc aagctgtgcc
     2821 tcctatattg tcagcataaa gttgcaaaag ccccacacag ctaactatag gaggtacagc
     2881 aaaaggcatg ataataagta tatttacaaa ggcttttaat tttaaaaaat aataatttag
     2941 cacaaaaacc aaaggaaaaa caagaatcac agaaagtaaa atactgccca cacaaacaag
     3001 caaagaatgc caaagagcaa gtaaaaatct ttcgtcatga aaaagttctt gataccattt
     3061 aagcgtaaga tcatcaggca aaacacttac accccaagaa gtggaaatag aatataaaaa
     3121 agtagccatt aaaggcaaag ctaaaaacaa aaaaaccaaa aacaaaactg cataatgata
     3181 aattttagct tttaaactca aattttcatt catttaaagc accttaaaat gatatttttt
     3241 agaaaggaaa ttggctataa aggtaacaac aagcatgata atagttataa tgatacttaa
     3301 agcactagcc atataaggat caagattgat atcgcctgcg attaaagcag cgattcttac
     3361 aggagcgaca ttaaaatttc ccgaacttaa agcataaata gtcgcataag ctccaaaagc
     3421 attggcaaat aaaatcacaa aaacaccaaa caaagcagga gcgagcaaag gcaaagctat
     3481 ttttaaccaa tataaaaaat tgcctccacc taacatttta caagcattta aatgtgaatt
     3541 ttcaagactt ttaaaagctg gaagcaaaag caagattgcc aaaggaattt gaaaatacac
     3601 ataaacaata tttaccccga aattagcata aacactaaca aaaggctcta tgcctaaatt
     3661 tttcaaaaac acattaacta caccattgct tccaagaact ataatgaaag caaaagctaa
     3721 aggaactcct gaaaaattac ttatcatggt atttaaagaa aaaagaaatt tacatatttt
     3781 tgatggagct aaaacaaata aagaatagct cgccaaaagc cctattaaaa gtccaaaaat
     3841 actagaaata aaactgattt gtaaagaatt tataatgctt tgtagataga atttggactc
     3901 aaaaatatgt ataaaattgg ctaaagaata aatttcatcc tcttctacat aaaaagcatt
     3961 aaaaacaatc caaatcaaag gtgctatcat aaaaaaagta aaaactataa aaaaaggtaa
     4021 aatacttaaa aatgctagaa atttttcttt cattttttgg cctttaaaat ttcatcatta
     4081 tatctcttat cgtgtttaag tcctaaaatt tcacagatac tgccacaaat ttcatcctgt
     4141 tttatcttgg cattttcata cgaaaaagca ctaccaaaag tgaaaaaagg cactaaaatt
     4201 tcatcttcac ttaagcctcc atgactttta ccctctgtca taccatgatc gcttgtgatg
     4261 attacattaa taccttgttc taaccaagta ggcaaatact cagaaatcaa aatatcaact
     4321 tttttggttt tattagcata ctcaatagag tgtgagccaa atttatgtcc tgcatcatct
     4381 atattcatag aatgtataag agtaaaatct agattatatt tgtttcttaa atgctcccca
     4441 tctgcaaata aatgagaatc taaataatca tcttcataat aaaaatgtcc ataaggtaaa
     4501 gttaaatttt catcttctat gtggcgatgt aaagaaggaa taaattcttt tttattataa
     4561 agctcaaaaa cccaatgata agctgcgcct ccagctttta agccttgttc tttgcaaagg
     4621 tcaaaaatgc ttgtttgttt tgaaaaactc aatttattat taattatccc acttaaaaca
     4681 ggctttacgc ctgttaataa gcactcgtat aaaggacgag acatgctagg aagttcgcat
     4741 tctaaagaat aaaatttgcc taaattctct ttgcaaagcg catttaaata tcccatattt
     4801 atactagcac ttttacaatt taagccatca agcacaacta aaataacttt ggacatcatt
     4861 tgctctttaa aaaatctttt acttcaagta aaataaattc attatcatca gttttattag
     4921 gttctctact tgaagaataa ggaaagttat tgtcattttc tacgactata tgagagtcat
     4981 ctactatatc cacaccttct atggtttcaa aaggaaaaac aaatttatca tttaccaaag
     5041 gctttttaga aattttattt ctatccttaa tatttaaaag atctatataa gaaatttttt
     5101 gagcttcatg ggttttatca tctaatttaa ccttgtaaat tcttttaaat tgggctacat
     5161 tattaaaaca atgcttagta tcttcacctt ctttgcaagt cttatcttta gtgccttctt
     5221 tttgatctct ttctatgatg atgccgtatt tatcatctat catattaaaa tcacctatgg
     5281 aatggctttt atcttctaag aaatatttat aagtttttcc ggtgaatttt ttatttttta
     5341 catcaaattc tatgattctt agatattctt tgcctttttc attctcataa gcgttgttat
     5401 tataaatgct tccttctaaa agcaaataaa gtttagaacc atctttagag cttgccatag
     5461 cttcaaagcc tttagaacgc ttgatattaa atttctcatt ttctccatca ggcttatcgc
     5521 taaattttaa acttggatta tcaggagaaa taagtttttt accctccaca tacacatcaa
     5581 aaacttcttt taaattccca ttcttatcaa aatgaagcaa ataaggacca aattcatcac
     5641 ctatataaaa ttcatcattg ataacctgta tactctcagt atcaaaatca accccactta
     5701 aatacctttc tttggttgtt tcggtggtta taggataggg gtatttttta tcactatctt
     5761 taaaaaaaac tgtttttaaa agttcgtatt ttgaattttt aaaatcaaat ttaaactcgt
     5821 gagcataaag catggcatca taagaattat actttttacc caagccatta tcgctaatta
     5881 cccaaaaaac atcttttttt ggaatatatt ttatcccact atgtccttgt ataggttgat
     5941 ttttaaaagg taaataaaaa tctgtctccc tgtttccctt agatttaaaa gttccaattt
     6001 tttcttctct agtgatattt gcaaatttcc cataagtttt aaaaaaatca ggagcatcct
     6061 taggaggttt tactgtactt ttagaatcta tgataatatg ccctgctaaa ttggcctcat
     6121 actcttgaac tccaaataaa acactgcaaa gcatagcact tgttaaaata acctttttca
     6181 tccaatctcc tttatttcat atccactata actttttctt gccaaagttg tggcaattct
     6241 ttagcgcttt tttcccaagc tttttgatct ttgattgctc ttgcattttt gtattgctca
     6301 cttggtaaaa gtttagcttt tatatcatct ggcaaggtaa tatgatcaat tcttattggc
     6361 cttgcataac cttttgctag attgatttgt cctttatcag aaagtataaa ctcacgggct
     6421 aatttagccg catttggatg ttttgcgtat ttattgataa tagttgtata acccgaaata
     6481 acactaccat cagcagggat taaaacttca taacgatctt tgcccacttt atctctatag
     6541 cctaaaccat taaaatccca aactaaaccc acttcaactt cacctttttc aagattggct
     6601 atacttacat cattatttac aagtcttcct tgtttggcta aagtattaaa aaaagctaaa
     6661 gcaggactta aatctttttc atccccacct aaggcataat tagctgccaa aactgcactc
     6721 acagcttgag ccgctacact tacatcacct acggtaattt tataatttcc cttaagcaaa
     6781 tcttgccaag ttttaggtat atcttttact acatctttat tgactataaa agctatggtt
     6841 cctgtataag ctaaaagcca atttccatct ttatctttag cccaagttgg aatttgatcc
     6901 cagtaacttg tcttaaaagg ctgagctact ccttgtttaa ccgctatctc tccaaaagaa
     6961 gcccctacat cccctatatc accgcttgca tttttctttt cggctttaaa tttagcaatt
     7021 tcttgagctg aactcatatc tgtatcgcta tgttctatgc cataaagatt tttaagatct
     7081 gcccaagtat ccttccaatt tgcccaagta tcaggcatag ctaaagaatt taccctacct
     7141 tctgcttgcg cagctttaat caaattctca tcaatagctt gtgaatttga aaacaataaa
     7201 gcaacaagac ctaaacttaa gaaaaatttc ttactcattt ttttcctttc aaaaaatatt
     7261 ttggaaattt aatgagtttt agaaacattt tagaaacaag ttaattttta agcaaacaag
     7321 gttataattt taaagtcata aacaaggagc gatcatgctt tatatttata tcaaaactca
     7381 aaatgcttta gttcaaagaa tcaattttaa tctcgatagt caagaactac cacaaaatat
     7441 tttatggatt gatttacttc atccaagtgt agcagaaatt gcttttatat caagtgaatt
     7501 taatcttgag tttcctacaa aagaagaaag ggaagaaata gaacttagcg caaaatattg
     7561 ggaagataat gcgacaataa ccatcaatgc tcatttttta gtaagagatc ttaaaagtga
     7621 tgaagaagat aggaatttaa tcaagcttcg cacagaaatt gttacttttg ctaccgctaa
     7681 aaatatctta tttactataa gatataacga atttagcact tttgaagaaa ttcaagcaag
     7741 gattttagct agtccgaaga attttgaaga tggttttgat attattgata aaatgtttga
     7801 agtacgcgtt gaaaaagatg cggatttact agaatggata gataaagaag caagacgctt
     7861 aagaacaagt gttttagaaa aaaaagatga atatagttat gatgaaatgc taaaggatat
     7921 ttcaagtttg caagagctta atatgcgcgt aagagattct ttgtttgata agcgtcgcgc
     7981 tatgacttct ttgctaaaaa gcgataaaat cgataaagat ataaaacaaa atctcactat
     8041 agttttaaaa gacttaaatt ctttggttga atttagcgtt tcgcaactta atatcttaga
     8101 taatatccaa accattttag ccagccaaat caacatagaa caaaacaaaa tcattaaaat
     8161 tttcaccgtt gcaactgttg ccatgatgcc acctacttta ataggaactg tttatggtat
     8221 gaattttaaa ttcatgcccg aacttgaact tcactatgct tatcccatag tgcttggcgt
     8281 gatggtaatt tctatcattt tacctttggt tgttttcaag aaaaaaggat ggttataaaa
     8341 atttattaag gagaaacaat ggatataata aacataggaa ttttaaccct aagcgataga
     8401 gcaagtagtg gtatatacga agataaagcc actgctgaaa ttgaaagagt gttaaattca
     8461 tatataaaaa atgatattat ttatcataaa gaattaatcc ctgatgatta tgatttgatc
     8521 attaaaaaat tactttatct agcagatgaa aaaaaatgcg atttgattgt tacaagcgga
     8581 ggtacaggtc cagcacttcg tgatgtaacc ccagaagcca cggaagccgt gtgtgataaa
     8641 atgatgccag gttttggaga acttatgcgc ttagaaagtt taaaatatgt cccaacagct
     8701 atactttcaa gacagagtgc aggaattcgc aataaatctt ttatcatcaa tctacctggc
     8761 aatcctaaag ccatagcaga atgtctagag cctgtatttc ctgcaatacc ttattgtatt
     8821 gatttaatag gtggagcttg tatagaggga aatgatgaag taattcaagt ttttagacct
     8881 aagaaaaaat gtcaaaatta aaatttatta gccctaacaa gtctgcttaa ttgtctagca
     8941 agcagacttg ccgaagcttc atctttgctt atcttttgta ctttattttt aaacttacaa
     9001 agcctgtcat ctaaaatcac atcattgatt ggaattttag gcttttcttt ttgcttttgt
     9061 gaaatctttt tcttaaaaaa cattctttaa tcctttttta taaatataca ccaacttagt
     9121 tgaaaagaat attattttag attttaaact attaacttta tttcattatt ttaagctaga
     9181 attcgcaaaa aataaatcaa ggaaaaaata aatgacttta attgcaattt tatgtcttta
     9241 cacagcactt ttatcttgga tttcctatgc tcaaattcgt ttcttagaaa gagaaaaaga
     9301 caaacaagct caaattttaa gcgaaaaaga ctatcaaaac gcagccgata ttgctataga
     9361 aaatgaaaaa ttcaagcttt tttcaaattt ttatatgctg attgttaata tcgcatggat
     9421 aggttttgga tttctttact taaaagaact attaatcagc gaaaactctc gccttgaaaa
     9481 tactctattt ttacttgctt ttttaattat cacaagtatt ttaaatttgc ctctaagcat
     9541 ttatgaaagc tttgttaaag ataaggctca tggtttttca aatatgactt taaaactttt
     9601 tatcaaagac actataaaaa gccttatttt aactttgatt tttggatttt taatccttta
     9661 tgccctactt ttttgctatg atttttttgg tactttttgg tggcttgcgg cctttatttt
     9721 tgctttttgt gtgatagtga tcataaatgt tatttatcct actctaatcg ctcctatatt
     9781 taacaaaatg gaaaaattag aagatgaaaa tttgctaagt aaaatcaatg atctaatgaa
     9841 acaatgtggc tttaatgcga atggggttta tgtgattgat gctagtaaaa gagataagcg
     9901 tttaaatgct tattttggtg ggctttttaa aagcaaaaga gtggtgcttt ttgacacact
     9961 tttaaaagcc ttaagcgaaa gagagcttct agcagtttta gggcacgaac ttggacattt
    10021 tgttcacaaa gatataataa aagccctaat caatggggca atcactatgt ttttactttt
    10081 ctttattttt gcccatttgc ctgattttgt atatcaagaa agccatctag aaggagttaa
    10141 tgggggtgtt tttgctcttt tgtttatatt tgcaaatatt tttagtttta tcatctctcc
    10201 tttaataaat gccttaagta gaaaaaatga atttgcagca gatcaacacg gaagcaaact
    10261 tacaagcaag gaagatatga agaatgcact cttagctcta gcaagagaaa ataaagcttt
    10321 tattaaaaca agcaagattt ataccttttt ttatcttagt catccaagca ttagtgatag
    10381 aatcaaggct ctttcttgac cataaaaaac gctcttatag aagctaaaac tagacttgaa
    10441 aaacacgaaa atgaagcctt atttatactt tgtgaatatc taaaaaaaga taggacttgg
    10501 atttttttaa atcaagatct agaatttgat tccaagccct attttgaact tatcaaacgc
    10561 tttcaatcag gggaaccttt tgaatacatc tttgaaaaag cagatttttg gggcttggaa
    10621 tttaaagtaa aaaaaggggt tttaatccca cgctatgata gcgaaatttt actttcacaa
    10681 gttcttaaaa tttgcaaaaa taataatttt caaaatatat tagaaatagg ctttggaagc
    10741 ggaattttaa gtatagtttt agctaaagaa ttgggaataa aaattacagc ttgtgatatc
    10801 aaccccaaag ccttacaatt agccttagaa aatgctaaat tacacaaagt tgaacattta
    10861 atcgacttta aactttgtga ttttaaacaa ataaaagaaa attatgattt tattttttca
    10921 aatcctccct atatccaaaa ttcatacccc atagatcttt gggtacaaaa cgaaccaaaa
    10981 gaagccctat ttggaggaga aaaaggatat gaaattttag aagaaattat aactttctcc
    11041 tttgaaagaa aggttaaatt tttagcatgc gaatttggct atgatcaaaa agtaatttta
    11101 aaacaaattt tatatcaaaa aaattttcaa gctgaatttt ttcaagatga acaaggatat
    11161 gatcgtgctt ttgtcgctca atttgctaaa aaataagctt tgtatgatat gataagttaa
    11221 aaaattaagg agaaaaattg aaagcaatca atctattttt acttgcagct atgattggca
    11281 tagagcttat acttggcata gttgttgcac cagtaatttt ttacccagct aaccttatag
    11341 gcgagggagt tttaagtcat tttcaaagtg gcttaatgat gactcaaatt ttcattaaaa
    11401 tgggatattt gttaattttt gtttctatta ttaatttatt atttgaaatc tattcttttg
    11461 caaaagaaga tatgaaattt cagattaaat tctcaaaatt aatgcttgct atactcattt
    11521 taattttgag cttagtgttt gttttgtatt ttacaaatac cattattgaa cttcaaaatt
    11581 tgggtgaaca agctacaaaa agccaagaat ttcttagtat acataatgca agcgaagtgg
    11641 ttataaaaat tattttatta atgcaagttt ttctatattt cttaagcttt aaaatagcaa
    11701 aaaaatgcta aaatccaata aaaatttata aggaggagta ggctatgatg atctctgatg
    11761 caagcatgat gcaacaaaat tattatttaa ataatgctca aaaagctagt gaaaaagctt
    11821 tagaaaacat tgcagctgtc cgtgcgataa gtgggattga tagtgctaat ttagctattg
    11881 ctgattcttt aagatctcaa tcaagcacta tagatcaagg tgtcgcaaat gcctatgatg
    11941 ctattggtgt tttacaaatt gcagatgcaa gcctgacaaa tatttctcaa agtgctgata
    12001 gacttaatga actctccgta aagatgaata atgcagcatt aagtgattct caaaaaagca
    12061 tgctaagaac agaagcaaca cgcatacaag agtccatcaa tgattctttt aataatgcta
    12121 cctataatgg aaaaaatgta ttccaaacta tgaattttgt agtaggaagt ggaactgaaa
    12181 cgaccaattt aaatccattg acaactagtg gtcttagcat agataatcaa gacaatatta
    12241 caaattttat ggatcaactt ggtgctttaa gaagtgaaat aggatcgggt atcaatgcca
    12301 tcacttctaa tatcaatgct agtgtgcaaa atagcatcaa tactaaagca gctgaaaata
    12361 atttgctgaa taatgatatg gcaaaaaacg tcaatgattt taatagcaat tacctaaaag
    12421 aaaatgcagc tgctttcgtc gctgcacaat ctaacatgca acttcaaagc aaaattgcta
    12481 gcttattaca atgataaaag ccctaatcta gggcttctct ttttataaaa atgactttag
    12541 aacaaatttt agaaaaaacc aaaaatatcc gtcttgtagc agcaagcaaa tatgttgatg
    12601 caaatattat cgaaaaactt tttactcaag gaattacaga atttggagaa aatcaagttc
    12661 aagccctagt acaaaaaaaa gaaattcttg ataaaaaaga tttaaatata aaatggcatt
    12721 ttataggaac gctacaaagc aataaaatca atcttttaat caagcaaaaa ccaatactct
    12781 ggcattcttg taatggatta aaaatagcaa aagccatgga taaaagacta aattataaac
    12841 tagatacctt actagaaatc aatagtgcca atgaactcag caaaagcgga cttaatccgg
    12901 atcaagctat agaagaatat ttacaaattc aagaagaatg tcctaattta aatctttgtg
    12961 gagttatgag cataggttca cacagcaaag ttcaaagaga aattgaaaaa agttttgaaa
    13021 caacctataa aatctatgaa aaacttcaaa aacacggagc taaaatttgc tccatgggga
    13081 tgagtaatga ctttgaaatc gccattaagt gtggatctaa tatggtaagg cttggaagta
    13141 ttttatttaa aaatttaaaa taaaatctcc cctaatcctt taccctgcat atttattgat
    13201 aattttttca ctaacactat cagaaataac aaaatcagta tgataaagca agcaagaacc
    13261 agtgctaacg atctttaaga caagcttttt attgcctttt tcatttggat tatgtgcact
    13321 tcttgctatt tcgtgaattt cataaacaag ctctcgattt aatcttgaaa gatcaagttc
    13381 tataatattg ttttcaaatt ctttaggctc tgctataaaa tctttatttt cttgagtatt
    13441 tttcttggcg ttaaattttt ttaccgcctt aatctctcct tcttgaagct cctctagagt
    13501 tttaattgat cttaaagcca agctatctaa tttgccctcc tctgctttat agcttaataa
    13561 aaatccataa gcctcatttt tagaggcttc attttttaaa atattttcaa tctcttctat
    13621 attagactca aaaaccgtca cttcaaaagt agaataaaaa tccaatatct caagcctgcc
    13681 ataacgctta ttatttttac tcatcataga tttaaagctt tcaatctttc ctatacttaa
    13741 aatttctcca ctgcctttaa gtgttgaaaa atctatactt tttacataat ctatttcctt
    13801 aaatttatca taaaaacgat cgagtgggtg tcctgaaaca taaattccca aaatctcttt
    13861 ttcaaattca agtttttcca taacctcaaa ttcttcattc ttagccacta tattaacttg
    13921 caaaccaaca gttaattcat cttctccaaa aagagaactt gctgcatttt ttcttgcatc
    13981 ggccattttt ttagagcctt cggttaaatt gtccatatta tcaaacaagc actttctcgt
    14041 atagccaaat tcatcaaaag cacccgcttt gataagactt tctagggttc ttttgttgat
    14101 ctttgtaggc tctatcctgc ttaaaaaatc atcaatattt ttaaattcgc ctcgctctct
    14161 tgcttcgagt aaattttcaa ctgcaggaat tcccacactt ttaatagctc caagtccata
    14221 aacaatagca tctttaccat cttcttgctc tactgcacta aattcgcgta tggctttatt
    14281 aacagaaggt ggaagaagtt tgatattcat ttttttcatt tcatcgatat aaacagcgat
    14341 tttatcgaca ttattttctt cacttgttag caatgctgcc ataaattcac taggatagta
    14401 ggtttttaag tacgctgttt gaaaagtgat caaggcataa gccgcagagt gagatttgtt
    14461 aaaaccatat cctgcaaatt taacaatcaa ttcccaaagc tcttcggctt ttactctatc
    14521 ataaccctgc ttttcagcac catcagcaaa ttcacttttt aattttttca ttttttcagg
    14581 atctttttta cccatagcgc ggcgcaccac atcagcacca cctagtgaaa atcctcctat
    14641 aatctgaaca atttgcataa cttgctcttg atagacaata atcccgtatg taggctctaa
    14701 tacactttca agagtatcaa atggatattc tatcttttta agcccatgtt tcctatctat
    14761 aaaatcatca agcattcctg attccatagg acctgggcga taaagagcaa gaactgcgat
    14821 aatatcttca aaacgctcag gctttaatct tgcatttaag ttttgcattc cgcctgattc
    14881 tatttgaaat attcctaagg tattcccact ctgtatggtt ttataaactt tagcatcgtt
    14941 tacatcgata gcttcccaga ttatgtcttt attgtaacgc tttttaatga gtttaatagc
    15001 attgttgatc aaagttaagg tttttaaacc caagaaatca aatttgatta agtctacatc
    15061 ctctaaatga tctttagagt attgtgtaac taaatgtctt tcatcgtttt tactctgtct
    15121 aaaaagagga gtttttttcc ataaactttc attagaaatc acaacacctg ctgcgtgcat
    15181 acctgcattt ctattgagtc cttcaagagc cttagcatac tcccaaactt caggaccctt
    15241 tggatgacgc tctataaatt ctttaatctt tggttctttt tcgtaagctg catcaagagt
    15301 gattttaagt tcttcaggta taagcttggc aagttcatct gcatcaggaa tactcatatc
    15361 acaaaccctt gccacatcac gaatcactcc acgagccaaa agcttaccaa aagtaataac
    15421 ctgtgcaacc ttatcggctc cgtatttatc aatcacataa tcaatcactt ctgcgcgtct
    15481 atcttgacaa aaatccacat caatatcggg catcgatacg cgttctggat ttaaaaaacg
    15541 ctcaaaaagc aaactataag gaataggatc taaatccgtg attttcaaag aataagcgac
    15601 caaactaccc gcagctgaac cccttccagg acctacagga attcctttat ctttagccac
    15661 tttgataaaa tcatgaacga ttagcatata gcctgaaaat ttcatttttt ttatgatatt
    15721 gatttcgact tcgagccttg ttttatattc ttcatgcttg cttatatcaa caaattttag
    15781 cctttcctca agtccttttt tgcaaagctc atcaaaaacc acatcatcat tatcaaaact
    15841 aaattctttg ccctcttcgg gcaagcttat attatattct tttgcatatt ctcttgtgaa
    15901 tttaaaattt ggcggagtgg gatttcctaa atttagctct aaattacatt tattagcaat
    15961 ttcttgagta ttttcaatag cttcaggtat atcagcaaaa agctcgctca tttgcgctgg
    16021 agatttgaca taaaattcat gaacactatg gcgtaaacga tcaggatcat tcagcttttt
    16081 gcccatagca atacacataa atacttcatg ggcagccgct ctttccttaa aagtataatg
    16141 ggtatcattt gtagcaataa ttttaatatt caattctttt gagagtctta taatatcatc
    16201 gtctatggct ctttgatctc ctataccatg acgcataatt tcaaaataaa aatcatcgcc
    16261 aaaaactttt ttataccata aagccgcttc cttagccgct tcataaccct tggctccaaa
    16321 acgaacattt ctttcactat gaatatttaa atgccaattt acctcacctt gcaagcaagc
    16381 cgaagaacag ataagccctt cgctatgctc ttccaaaagc tttttattga tacgtggata
    16441 ataatacaaa cccttgatat agctttgaga acttagatac attaaatttt gataaccaac
    16501 ctcatttttt gcatataagc aaagatgaaa tctttgacgc gagcttttat ctgaaatatc
    16561 ttcatgatta tgcaaatacg cttcaagacc tatgatgggt tttaatccct cagaacgcat
    16621 agtctgataa aaatcaattg ctccaaacat attaccatga tctgtcatgg ctacacttgt
    16681 agcaccctgc tctttaaggg ttttagctaa ttccttaagc ttattggctc catcaagtaa
    16741 agaatattct gtatgcaaat gaagatgggt aaattggctc atcgtcttcc ttgaaaatat
    16801 aaatactaaa gattttgata aaaattataa atttttattg ctgaatttga aagaatttat
    16861 cactaaaaat tacctgaaat ttatcatgat aattttatca ccatcagcaa atatatttta
    16921 aaaaataaaa tggtaaaagt ttttaagatt gaaagaatga atcatctttc aagagataaa
    16981 atcacaaaat ttgttcatat tctttgccaa tataaatttg gttatccttt tctataacag
    17041 ggcgtttaat acaacttgga ttttctaaaa taatattttt caactcaagc tcgcttaagc
    17101 tctctatctt gtctttattc aaaccaagtt tttttgaagt agtgcctgca gtattgataa
    17161 tttcactaaa tcttttatat ttaagccagt tttcaagcac gcccaaatca atctttttaa
    17221 tatcaataaa atcaaattct agagcttttt tatctaaaaa ctctagagct ttttttacgg
    17281 aattacagtt tttaatccca tagactttca ttttcttgcc tttttaacca aatcagcaat
    17341 caaaaacgca agctcaagtg cctgatctgc attaagtctt ggatcacact gtgtctcata
    17401 gcgtttttct aaactttgcg cagtaacatt actcgcacca cccgtacatt cggttacatc
    17461 ctgtcctgtc atttcaagat gaactccacc tgcatataca ccttcgctca tagctatttc
    17521 aaagaaatat cttacttctt gcatgatttt atcaaattca cgcgttttaa aatcccctgc
    17581 ttttaccgta ttaccatgca taggatctat actataaact aaatttaatc cctctttttt
    17641 aagtttagag aaaattttag gcaattgagt tgctattttt tcagcaccca ttctaatgat
    17701 gatatttaat ctaccctctt cattgtttgg atttaaagca ttagctaaag cgatcacatc
    17761 atcagcactt gcatttgggc ctatttttac tcctaaagga tttctaactc cacttaaaaa
    17821 gtgtacatga gcttcatcaa gacccctagt tctctcacct atccaaagca tatgagctga
    17881 acaatcataa atttcgccac ttaagctatc cactctagtt aaagcttcct cgtaaggcaa
    17941 aagcaaagct tcatgagaag tatagacatc aacttctttt aagcttggag tattataggt
    18001 attaatacca caggcctcca taaaatctaa ggcctgagaa attttctcac tgatatcggt
    18061 gtattgttga tgcagctcgc tttttttcaa aaaacctaaa ttccatcgat gcacctcgtg
    18121 taaattagct aatccccctt tagcaaaacc gcgcaataaa tttaaagtag tagcactttg
    18181 atagtaagct tcaagcattc tatttggatc aggaattcta gctttttcat taaattcaaa
    18241 gccattaatg atatcacctc tataacttgg aagctttact ccatttatct cttcataatc
    18301 gctacttctt ggcttagcaa attgccccgc catacgacca attttaacaa cgggacaacc
    18361 acccgcaaaa gttaaaacta tagccatttg aagtaaaatt ttaaacatat ctcgtatatt
    18421 tactgctcca aaatttgcaa aactttctgc acaatctcca ccctgaagta aaaaagcttc
    18481 ttttcggcat actcttgcta aagcactttg aagctctctt acttcacctg caaaaaccaa
    18541 aggaggaagt ttttcaagtt tatttaagac tttatttagc tcctcttgat tagaataaat
    18601 aggctgctgc ttaatagaaa aatttttcca agaattttta gtccaagtca tcgttatttc
    18661 ctaaagatat aattttaact tcccctatag gttgagtaac caaaaggaga taaggtaata
    18721 ggtatatgat aatgtttttg atcttttaaa agttcaaaac ttacttctac aaaggggtaa
    18781 aaactatcaa ctttatgtga tatataataa tctttggtat aaaatttgag tttataaact
    18841 ccaaaagaac gattttctgt tttttcataa ggaagaaaat ctgctatcct accattcttt
    18901 tttgtaaatt tttcacttat cttgacccat tgtcgatttt gatccaagtt ataaagctct
    18961 acttttacat tagatgcagg ttggccagag ttaatgtcta aaatatgggt acttaactga
    19021 tattcagttg catttagaaa tattggtatg cttatgagag ccaataaaat tttttttgta
    19081 gaaagcatat ttttctccct taataatatt ttatatatct aaatcataac aaaatattat
    19141 taacaataat aactaaataa taaattttat aaattagtta aaatatattt atttaaaaaa
    19201 cagaaagatg ctaaatctgc aaaataataa ttttgcagat tattttttaa gttctttaat
    19261 acgtgctgct ttaccgcgtc tatctctaag atagaacaat ctagcacgac gaacacgacc
    19321 ttttcttaca acagtaatac tctctaaact ttcgctataa attggaaaaa ttctttctac
    19381 gccaacatta ttagcaccca ttttgcgaac gataaaggtt tcatctacac cattacctct
    19441 tctagctata caaattcctt caaaattttg aattctagtt ttatcgccct ctttgatgcg
    19501 aattgcaagt cttaaagtat cgccagcacg aaattctgga acattttttc cctcaatttg
    19561 ttttgcttca aattgttcta tgtatttatt tttcataaaa aattccttat tttttgcgtt
    19621 catgctctaa aaataaatct ggacgaaaaa atttcgtttt gcaagacgct aaagtagttt
    19681 ttaaagtcgc aattttagcg tgattaccct ttaaaaactc tgaaggagta taaaatttct
    19741 taaaattttg ttcaaaaata aaaggttttg caaatgaagg agcttctaat aaatcatttt
    19801 cgaaactttc ctcttccagg ctgcaagcat tacccaaaac tccattgata tttcttgcaa
    19861 tagcatcaca aagagtaagc gctggaagtt ctccgcccgt taaaataaaa tctcctatgc
    19921 taaacacttc attagcaaaa atttctatta ctctttcatc aatgccttca tatctcccac
    19981 aaacaaaaac aatattttct ttcttgctta atctttttgc atctttttga ttgaaagttt
    20041 ttccacttgg atttagaaaa ataaaataag gatctttttc actatctttg ataaatttta
    20101 aagtgttata aagaggttta atttgcatta acaaaccagc tccaccgcca attttataat
    20161 catctacttt atgataaata ttatctgtaa aatttcttgg gtttaaaaag tcgagttgaa
    20221 aaagctcttt ttgaattgct cgggcaagaa tagaatcttt aaaataaaat tcaagcaaat
    20281 tgggaaataa agaaacaaaa ctaaacttca tgaattttct aagattaaaa aaacatcttt
    20341 ggtgcaaaaa atagaatatt tttctatatc aattttattg acatatttat caatataggg
    20401 aataaaaaaa gttttagcat aagctttatc aattaactct tgatcgcttt gaatttcaaa
    20461 taaataagaa tctcctactt caagaatatc caccactttc cccaaccttc gctcatcatc
    20521 gaatacttcg cattttaaaa tatcaaaata aaaaaattca tcctttttca atatgcaagt
    20581 ttgtcttgta gcttcaatac tttgataaag aattagatta ataagctgtt ttgcagcttc
    20641 aacattctca taaccttcaa acaaaacaga agagttagct aaattgtagt gtttaatttt
    20701 caactgactt ttgccatttt cagtgaaaaa agaagctcct tttttaaatt gctggataaa
    20761 gtcacttagg ttgtaaagtt ttaaataccc tttaagtcca acagtttttc caagtttggc
    20821 aacttgaata aaatttcttt cactcaagtg ctttaaccgt tacacgataa ctcattgaat
    20881 ctttgctttt acaagctgag acaactgttt ttattgcatt gatcattttt ccatttttgc
    20941 cgataagctt accggtatca attttatcag cataaagtat aatttcagca aaattttcat
    21001 caagctttat tttttctgtt gcaattttat ccggataatc tgctatgagt ttagcgtatt
    21061 ctcttaaaaa attttctacc atgaaattta tttactagta atagaagcta ctttatcact
    21121 aagttttgca ccaacgcttt tccaataagc tagacgctca gagtcaaatt ttaccacttc
    21181 aggctcaacc ataggattat aatatccaat gctttctatc catccgccat cacgacgttt
    21241 tctactatct gttactacta tacgataaaa tggtctttta gttcttccca ttcttgtaag
    21301 tctaattact gtcatataca ctccttaaaa ataaaaattt tttaactata gatactatta
    21361 aaagtattta tagataaaaa atctaaaatt gtcttctagc ttgattcatc atttgcatta
    21421 aactatccat accctttttt cctgaaaatc tcttagcaag tttagcagca tttgcaaatt
    21481 gttttaaaaa gcgattaact tcaacttgag acaatccagc gccttctgct atacgacgct
    21541 ttctagcatt attaagtaaa tctggatttt ctctttcttt tggcgtcata gatgaaatca
    21601 tggctttaat atgtataatt tctttagaat tatccaaatc aagatctttt acacttgaag
    21661 caacattaga aagtccaggt atcattccta taatagactt catactaccc aattttttaa
    21721 cactttccat ttgagttaaa aaatcattga aattaaactc gccttttttg attttttgat
    21781 ttaatttctt agcctctttt tcatcgataa tggccgcagt tttttcagct aaagttgcca
    21841 aatcgccttc acctattata cgattaacta ttctttcagg aataaaaatt tctaaatccg
    21901 ctatcttttc acccacgcct acaaatctta aagggattcc aatttgcttc gtaataccta
    21961 aagctatacc ccctttggta tctgcatcaa atttagataa aataactcct gtaataccca
    22021 aaagctcatt gaaacttgag gctgttttaa caccatcttg tccactcata gcatcagcga
    22081 catagaaaat ttcatctgga tttaaaacat tttttaccgc ttttaattca ttcattaaag
    22141 cctcatcaat agccaatctt cctgcagtat cgactagcaa tacatctgcc atagaatttt
    22201 ttgctttttc taaagcttgt tgtgccactt taatcggatc tttttcattt tcgatataaa
    22261 aaagatctaa ctcattagct tcacaaagct gtttaagttg ctctactgca gccaaacgct
    22321 gtaaatcaca agcagctatt aaaacttttt tattgcgaag ttttagatag ttggcaagct
    22381 taaccgtact tgtggtttta cctccacctt gtagacccac cattaaaaca acagttggag
    22441 gcttagtagc aaaaacaaaa ccttgatttt ttccatcagc attcaaaata ttttctaaat
    22501 tggttttaat agcttctaaa aattgctttt gtcctatgcc atttttttta acatcttctt
    22561 caataagcaa aagcaaatct ttaaccactt tatggtgtac atctgctttt agtaaggctt
    22621 tttttaaggt atctaaagca tttttaagcg ctttttcatc atcaacaaaa cgaagtttat
    22681 taatcgctga tttaaaagat tcgctgacta attcaaacac tttattacct ttctattatt
    22741 tttaaatttt aagttgagta ttatacaaaa tcttttctta aatggcttta aaaatctaaa
    22801 ttttttatct caaaaccaag ctttgaaaag ctagaatcta attctgcctt aaattgataa
    22861 tttaaaattc gaatttcatg actatgcaaa tacatcctat cacttgaaat tttagcatat
    22921 ttttcatctc ctataattcc atgcttgata aatttagcat gcactcttat ttgatgggtt
    22981 ctgcctgttt taatgataat tttagccaaa gtttttttag cttgcatcat aataggagta
    23041 aaaatactga ccgcgcttaa accctcttta gaaattttgc tcaaagctcc attcttagtt
    23101 tttatggtta atataggctc atcaatctca atttcttctg ctaaaattcc atccaaaaca
    23161 gctatatagc ttttataaac tctttgtttt ttaaactctt caatgcatat ttttcgaaaa
    23221 tcttcatttt tacaaagcag tataacacca ctagtttctt tatcaagacg gttaagtaac
    23281 tttgcattga attttttttc aagttcttca ctgatataag catagggttt atttatggct
    23341 atgatatttt catcttcaaa aattacttta ggcttgctag tttttacaat gctaaatttc
    23401 gtcttatcac tcatcaaagc tcttgctaca actacctttt taccatgaga aaaaacgcaa
    23461 cccttatcta tcaaatcttt tgcttcgcgg tttgaaatat tttcttgcaa agctaaaagt
    23521 ttatatgctt tttcttgcat caataccttc ctgtatagct tgtattatgg ttgataaatc
    23581 attattttgt gctatttttg cttttaaatt gtaattatga attataccat caagttcttt
    23641 taagtcttca caaaaatata cattatccac ttcttgaaat aaactttttt gattatgtat
    23701 ataaatccca cttatcaata cattattaaa atgagccacc tctatgggat tatgtcctcc
    23761 tatcccctca aaaaaagaac ctcccagtac aactacatct gaaatggcgt aaaaatttac
    23821 aagctcaccc aaacaatcta ataataaaat atcttgatta aatcttttat cttcattttg
    23881 caataaacta aatttatcaa attttaaacc tttatcgtgc aataattgtt ccacttctaa
    23941 aaaacgctca ggatgccttg gagcgatgat taatttctct tgtttatcca ttttataatg
    24001 cttgagtaaa agttcttctt cacccttatg agtgcttgca aaaataatca atttttgctt
    24061 aggtttaagg tatttttgtg taggaaatat ttgcaatttg gatttaatat ttgaaaaaat
    24121 tttaacattt ttagcaccca aatcttctaa tcttatttta tccacctcac tttgtgcaaa
    24181 aacttcatct atataacaaa aaattttctt ataaaaaaat ctaaattttt tatagcttgc
    24241 atatgaatta tctgaaattc tagcatttag caaaataacc ttactttttt gaagctttgc
    24301 tataaaaacg agcattaacc aatactcggc ttcaaaaatc actaatacct tgctaggttt
    24361 gagccaaaat ggaatccaat tttcaaaagc aagataattt accttattgc aaatttcttt
    24421 agcataatca taacccgtct gtgtaatagt cgtaattctt gaatcaaatc ttaaaacaag
    24481 ctctttgaca cttcttgctt ctccatatga gcaaacatga aaatgcacat ccgatctttt
    24541 ttgagatata ttacgaaaga gaaaaaatct agcctttaag ctatatttat attttggctt
    24601 aaataaagaa agtaaaaaaa gtgggatagc gcagagtaaa aaagctatcc acactaaaat
    24661 ataataaaga aaaatcaatt ttgatcttct tgctctttat ataaaattct tccacaatga
    24721 ggacaagtta taatctcttc acccttaatc actgataaat aagttttatc ataaattttc
    24781 ataaagcagc cataacaagc ctgtttttta acgggaacta cggctgtatt tttagcccat
    24841 tttctaatct tttcataaaa gcttaaaact ttttgattca tctctgcaac taatttagtc
    24901 tttttagtat aaacattcat tctttctttc tccaagccat ccatttgaga actaatgctt
    24961 actcttattt catctaaatt ttgctcctct tttgctcttt cttccaaaag ttcttttttg
    25021 aaaagctctt tattttctaa aattttatcc aaacgaacaa tctcatcatt agccgcatca
    25081 agctgctctt tagcgatatc ttcttcgatt tttaaagcat ttgcttcttt ttctgtctta
    25141 acagctccac tctttttaga aagctctttg attttagctg aaaactctga aatatgagca
    25201 ttattttgaa ctttttgatt ttctacatct tgaatttcat tttctaaatt atttaattca
    25261 acattaaatt tagcaatctt attttcagca tcttttaaag tcttgctaat actttccatc
    25321 ttcggttcaa agctgtcaat ttcttgatct atttttgata aaagcactaa ttgttcgaga
    25381 tatttattca tttattttcc ttaaaaatat tgaaatggat tttttgaaac tgttattata
    25441 acttttagcg gcaaattttt caagtgtttt gctaaacatt gagcaaaata gcgttcgctc
    25501 tcaaaatgtc ctaaatcaat caaatttaga tgattgctta tggcttctaa ggcttgatgg
    25561 tatttaaaat cgccacttaa atagcaatct gccttaactt catttaacaa atctccccca
    25621 ctccctgtgc aaacagctaa gcgtttcaaa tattcttttc cacaaaaact tgttcttaga
    25681 atttctaaat ttaaacgctt tttaaccaca atacaaagct cttcaaagct catatctaca
    25741 tctatataag ctaaaaattt atttttagaa gaaatttcaa atcccaaaat ttcttctata
    25801 aaataagtat ttaaatggct aagatcaaaa ttagtatgca tagaaattaa agaaagattt
    25861 tttctaagca tttccttaac aaaagctcta ggataggctg aatttgccaa atccttcaag
    25921 cctttaaaaa ttaaaggatg atgcgtgata aataaggaat tttcttctgc attttggatc
    25981 aactgctcat ctatatcaag gcttagataa acattatgaa tttcatcgtt aaaattccca
    26041 agtaaaagac cgctattatc ccaaatttct tgagtttcaa aagggcttag cttgtctaaa
    26101 aaattataaa tttcaatcag tttcatctaa atttttctta taaatttcag cacaagtttt
    26161 cgaaagctcg cgaattttta gcatataatc ttgtctttgt gcaacagaaa tagcacccct
    26221 tgcatcaagc aagttaaaag tatgagctgc aagcatacaa taatcataag caggcaaagc
    26281 caatccctgt tctaaaatac ttttacattc tttataagta ttttcaaatt gctgatttaa
    26341 aaaatctaca ttgctgattt caaaattata tttactaaat tcatactcgc tgcgcttatg
    26401 cacatctgcg tatttaattt tttccccatt aaattcgctc caaacaatat cataaacatt
    26461 atctacattt tggagataca tagcaattct ttcaagccca taagtgattt cagcacttac
    26521 caaatctact gcgattccac caacttgttg aaaataggta aattgagtta cttccatacc
    26581 atcaagccaa acttcccaac caagacccca agcgccaaga cttggactct cccaattgtc
    26641 ttcaacaaaa cgcacatcat ggcttttaag atcaaaacct aaattttcaa ggctttttaa
    26701 ataaagctct tgaatattat caggacttgg cttcattagg acttgaaatt gataataagc
    26761 cccaagacga ttaggatttt ctccatatct tccatctgtt ggacgacgag aaggagccac
    26821 ataagctgta gcccaaggtt ttttacctag acttcttaaa aaagttgctg gatggaaagt
    26881 tccagctcct gctggcatat cgtaaggctg catgattgca caaccttgtt tttgccaaaa
    26941 ctcttgtaaa tttaatatca tctgagaaaa agtcatttta accttcttta ttttcattta
    27001 atttttcatt tgctgtacta gaattttcat cttttttcat ttccaaatca ggctcagttc
    27061 ttgccccaaa aatttcagct gtcttactcc acataagctt atatttacgt tttaaaaatt
    27121 ctatttcttc tcgggcgtgt tttaattcat gatttaaagt ttcaatagtt tttctatctt
    27181 catcataaag ctcttgcatt gaataaagcg catcttttaa aaatttattt tcatttttta
    27241 aagcatcaag agtttcatcc tttgcatcta aaaccttctc atgcaaattt aaaattgttc
    27301 ctatagtctt ttctacaaag ctttctcctg ccaaagtcat agaatttacc atagcaggct
    27361 ttgagttaga agcacttgga acaacgctaa aagttccttg gtttgcttcg atataaattt
    27421 ttccctcttc ttctttgaaa tttaaagcac catttgccat cattcccttt acaacatctt
    27481 catttaaatg cacaagttta caaaattctt ggagctctaa ataagtttgc attttcatcc
    27541 ttttttacaa taaaacttct acactcttag aatcactgat taagttttct tcttgatttt
    27601 ttctatcttg ctttaaagct tttgctaaag tttcatcatt aagagcaaga atttgcatag
    27661 ctaaataagc tgcattttta gctcctgctt tgccaactgc taaagttccc acaggaattc
    27721 cacctggcat ttgcacggtt gaaaataaag aatccatact cgctaaagca cttccaggca
    27781 taggtactcc caaaacaggt ttggttgtat aagctgcaac tgctcctgct aaatgcgctg
    27841 ccatcccagc agctgcgata aaaactttag ctcctttttc ttctgcttct ttaatatatt
    27901 cctgagttcg ctttggacta cggtgagcag aactgataat gagttcatat tttacaccaa
    27961 atttttcaag cgttttggca cattcgctca tgatttcata atcactcttg cttcccatca
    28021 taattgatac aaatttcatc caatttcctt tcttaaaaaa ctaaaactgc tgattttatt
    28081 tggcattttg atttcgtttt cgtttccgct atgaatttcg ttgaattctt tattgttttt
    28141 agaaataagt tttttaaatt ctacaaaata tttatcttct tttttataaa tcttacccaa
    28201 tttattatca caagtctcaa tttcatcacc taaaggcatt aaaatttcat aagctttgtt
    28261 taaaacaacc ttgcccttgc atttaaaata ctctccatcc tcaacgatag catgtacttg
    28321 atgagtaccc tcttctatgc tcgtatcgtg attttgtgta tctgcttttt ctaaagggcg
    28381 tgagacaaga taaccgtctg taaaaccgcg atttttaagc gtagcaattt ctttttcata
    28441 cttacttgcc tcaaatttac cttctaaaac atcttgtatg gccattttgt aagttctagt
    28501 tgtaagtgca acataatact cacttttagt acggccctct attttaaatg cgcttatgca
    28561 atcttctttc ataatttttt ctatgtaaga gcataaattt aagtctttag agttaaatac
    28621 atgggtacca ttttcatctt cttctaaacg aaaaagtact ccattttcag gattttttgc
    28681 ataaagttcg taattaaatc tacaatcatt agcacaagag ccacgattac tcattcttcc
    28741 gctttgaacc gagctgatca aacagcgacc cgagtaagca aaacacatcg atccatgcac
    28801 aaaagcttct agctcaatat cgcaattttc ttttaaactt ttagcatctt taagactcaa
    28861 ctctcttgcg ataactactc gttttgcacc catattttta taaactcttg cgtcaagata
    28921 gtttaaaaca ttagcttgag tagatacatg caaggctatt tcaggagcta actctcgaac
    28981 caaagccatt gcacccactg aagctactat aaaagcatcg ggtttcatct ctttaagctt
    29041 taaaatatgt ttttttaaag attctatttg tccacccaag tgaaaaccat ttaaagtaac
    29101 ataaaccttt ttgcctcttt ggtgggtata ctcaatagct tcttcaaaac tctcataatt
    29161 aaattctcta gcagtgcgag agcgcaaaga aaaattattt acccctgcgt aaactgcatc
    29221 agctccataa gctaaagcga tttttaattt tgcaaaattt cccgcaggag ctacaatctc
    29281 tggaataatc atttttgacc caaacttgct ataagcgctt ctatatcatc attgcttaca
    29341 atatcagtag tagaatcacc ttcaatatga actgcagaac tcactcgttt cttatcatca
    29401 atcctacctt caaacaaaga actcatatag cgactcaagg cacgcattac attgataacg
    29461 cgctctattt tttgacggtg aatatcttga tattgcatag catccattgc catcattact
    29521 tcatcttgtc cacattgtaa cttatcaata atttcttgac ttgttttttt cacttttaaa
    29581 tttaactgca aagcttcatt aaaactgaca acatttggaa atttctcatt tagttttgaa
    29641 aatatttcaa tatttttagc taatacttta tcaatctcac taaacaaatt ttcagaatct
    29701 gcaaagaaat tattgatact ttctagctta tccatcatct cagtagcttt taactcactg
    29761 tctttagtaa catcatcaag ttgatgaact accttatgtt cttgatttgg tggtggtggt
    29821 ggccatacaa cactaggatc tggcttataa tcagacacct ttacatcttc tagcattaat
    29881 ccttcttcag attctatatt gtgagactct gtttcgcttt taatgttaga ctctgcatcc
    29941 tcatcaaaat ttacatcacc attcatcaag gcgtcaagtt cttcttgagt catttttttc
    30001 cttttttaaa cctagatttt gttttagtac tacgattata atcaa
//
LOCUS       DAQUWA010000013        27785 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.013, whole genome shotgun sequence.
ACCESSION   DAQUWA010000013 DAQUWA010000000
VERSION     DAQUWA010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 27785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27785
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.013"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            42..251
                     /locus_tag="R8X70_000508"
     CDS             42..251
                     /locus_tag="R8X70_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEF2928318.1"
                     /translation="MPFVNIRITKENGEPTSEQKQELIAGVTDLLAKVLNKNKASTVV
                     IIDEIDTDNYGLGGKSITQVRKEKS"
     gene            complement(248..904)
                     /locus_tag="R8X70_000509"
     CDS             complement(248..904)
                     /locus_tag="R8X70_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEF2928319.1"
                     /translation="MELILLSLIVILLVFVIIKQFKNSSKIEEKDIHISNDITQLKSI
                     GELSVFQVFSKEIVTKKDSAFNGIWKSILGWSLSERQIALIFEFEITFLYDLRDKNFE
                     IIVLDNDHYKIIMPECKYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGLSFSENDKNK
                     LIREAKEEVKELSLNLIRNLESKIHKSARDTLEAIAKGFGAKKVEFEFKDNTQKLDIN
                     "
     gene            complement(925..2108)
                     /locus_tag="R8X70_000510"
                     /pseudo
     CDS             complement(925..2108)
                     /locus_tag="R8X70_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            2162..2617
                     /locus_tag="R8X70_000511"
     CDS             2162..2617
                     /locus_tag="R8X70_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEF2928320.1"
                     /translation="MKKIVFVCLGNICRSPMAEFVMKDLVKKANLEKEFFITSAGTSG
                     EHDGENMHYGTQNKLKSLNIKYQNFTSKKLTQALCDESDFLITMDNSNFKNVQKNYKN
                     TQNKLLKITDFASHLGYDEVPDPWYSGNFDETYQIISLACKNLLSHLQK"
     gene            complement(2619..3488)
                     /locus_tag="R8X70_000512"
     CDS             complement(2619..3488)
                     /locus_tag="R8X70_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HEF2928321.1"
                     /translation="MLISPIEKIQFQGFEFYIKRDDLLGEINGNKARKLAFYLSQNYN
                     QSQRFISYGGIQSNALVALSIFASKRNLTLIYACEKIPTYLRNNPCGNYKLALENNVY
                     FIENHSDKDLKTFALSLCEKDDVFIEQGVANLNAESGYIQLAKEIESQSKNLGLDFDI
                     FLPSGTGTSAAFLAKNSKFKVFTCACVGDECYLKTQILNLIKNYDFSNLEILKSDKKY
                     HFAKLYLEFYQLYKDLKQECQIEFDLLYDMLGLSIALKREWKNPLLYIHQGGISGNSS
                     MLERYIFKYCKDK"
     gene            complement(3498..4448)
                     /locus_tag="R8X70_000513"
     CDS             complement(3498..4448)
                     /locus_tag="R8X70_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEF2928322.1"
                     /translation="MKNEQEEGNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDLR
                     EIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLINSQKVELEANITNY
                     EQLSKELNSSIDNKDKQILILLGQLEKKDEEIRNLQESFDKAKEKVQNLSLIRENLSK
                     ELQAKLDSNITIDQKTGSISLPSEVLFDKDSYTLKNEAKASLRKILSEYFNAIINDPK
                     ILSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKDIRLQKLLMASGRSF
                     SDPVLVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
     gene            complement(4445..5899)
                     /locus_tag="R8X70_000514"
     CDS             complement(4445..5899)
                     /locus_tag="R8X70_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEF2928323.1"
                     /translation="MDIRSDEISELILPESKEKKGYLVYLKIIFIPALLYVFILLGYY
                     DIINFKVELHTVVMIGFIFFTALVFARHSSEYAYSIFEQQKDEFKQALKRHIMKHFLT
                     IGKDTKSNANFDDFAYAYVRGARNENFASIGAAIFPMMGILGTFISIALSMPNFSSSD
                     TAALEQEIALLLSGVGTAFYVSIYGIFLALWWMFFEKFGKSKIERLLNRQKNSTSGFF
                     WTKEELDQRYLSESLQHFEKISAIFKQVSNQDFFAELDHTIDRKFGIFQDMLNVEEKA
                     IRLSGEHIKQTMGELSRAQRDQRDLGKMYGEMLNGIGMLNQNLKEINMRMSEQYNRLL
                     DISSEKIQHFDKTLLAFDEKVDRFGKNFELYEKAILESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDAKIKMMDKLKQEIKNLNEETNEVMAKIGKIPNPAQEEQDNIENEILSS
                     EKITENTEQTKENQNDSDTLDSNKNFNKEEKEDK"
     gene            complement(5998..7062)
                     /gene="fbaA"
                     /locus_tag="R8X70_000515"
     CDS             complement(5998..7062)
                     /gene="fbaA"
                     /locus_tag="R8X70_000515"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HEF2928324.1"
                     /translation="MGLLDIVKAGVVSGDELNKVYEYAKAQGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPQGDVLGAISGAKHVHLLAKAYGIPVILH
                     TDHAARKLLPWIDGLIEANAEYKKTHGQALFSSHMLDLSEEDLEDNLSTCETYLKKLD
                     SLGISLELELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKEKFGLEVDKPINFVFHGGSGSELKDIKDAVSY
                     GVVKMNIDTDTQWAFWDGVREYEAKNREYLQGQIGNPEGEDKPNKKYYDPRVWLRSGE
                     ESMIKRLELAFEDLNCIGRN"
     gene            complement(7062..7883)
                     /locus_tag="R8X70_000516"
     CDS             complement(7062..7883)
                     /locus_tag="R8X70_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEF2928325.1"
                     /translation="MRKVSLIAAALIAGVTLNLNAATIATVNGKNISDTEVSEFFAPM
                     LRGEDFKSLPDHQKKALLQQYIMQDLILQDAKKQNLEKDPLYKKELERAKDSILVNVY
                     QEKILNSIKVDSSKVKAFYEQNKEKYIKPAAVQAKHILVSSEQEAKDIIKELKGLKGK
                     ALDDKFSQLAQEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSRAKEQIKFDDVKKGIENGLKFEEFKKVINQKGQDLLNNAKVEYK"
     gene            7966..8592
                     /gene="nth"
                     /locus_tag="R8X70_000517"
     CDS             7966..8592
                     /gene="nth"
                     /locus_tag="R8X70_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEF2928326.1"
                     /translation="MKRNSEIKELFLKHFDKPTTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPELFKAYPDITSLANANLSSLKTYIQSCSFYNNKAQNLIKMAQSVRENFNAEI
                     PLDEEKLKSLAGVGQKTAHVVLIEWCGANCMAVDTHVFRVSHRLGLSKAKTPEATEED
                     LTRIFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELE"
     gene            8589..9239
                     /locus_tag="R8X70_000518"
     CDS             8589..9239
                     /locus_tag="R8X70_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HEF2928327.1"
                     /translation="MKLIIFLLAFTLHVFALEAYKPDKDFAPYFNPLNCSVVLDKFFY
                     TNCYDYKLKGTKAVAYKVEASNLKEKQIKKRARFEDDTNIPKKYRSTWSDYKNSGYTR
                     GHIASNASFRFSKAAQTSVFLMSNITPQNAQVNATVWNEIEQRERSLAFKFQSVEVLN
                     LILYGKNPKFIKNGIAIPSSYVKIIKTSRFEECYEVPNNNIQSEEINDYKISCNKF"
     gene            9249..9881
                     /locus_tag="R8X70_000519"
     CDS             9249..9881
                     /locus_tag="R8X70_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HEF2928328.1"
                     /translation="MEISALTITILYIIGISAEGMTGALAAGRHKMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIVLICLCALVATKIPRIVSRLESLFLTLDAIGL
                     VVFSILGAQIAIEQNHGFIIAISAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     AGVIYYTLMVYLQLHALICTLVTLFVGVTARLLAIKYQWSLPIFSYNEEK"
     gene            9960..10178
                     /locus_tag="R8X70_000520"
     CDS             9960..10178
                     /locus_tag="R8X70_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HEF2928329.1"
                     /translation="MNKAILLTLICLFFTACEQTKSVEYYKAHPEEAKKRSDECRLKS
                     IISQDCVNAHSVAIPKEDWDEGHDTQTR"
     gene            complement(10182..10886)
                     /gene="cmoA"
                     /locus_tag="R8X70_000521"
     CDS             complement(10182..10886)
                     /gene="cmoA"
                     /locus_tag="R8X70_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HEF2928330.1"
                     /translation="MKDELFKEKLTKQFEFDKSVASVFDDMINRSVPFYRENLELCAN
                     LIKKLTKEGAKVCDLGCSSANFLIFLASLRKDLKLFGADNAPSMLEIAKSKAQAYGLN
                     IEFFEANLCDFVFFQSDVFVANYTLQFIRPPKRQELVNEIYKNLNKGGIFIMSEKILY
                     EDAFLSKNMIELYADYKERQGYSKIEIAAKREALENVLIPYSEKENLDMLKNAGFEKI
                     ESVFKWVNFETFIAFK"
     gene            complement(10890..11726)
                     /locus_tag="R8X70_000522"
     CDS             complement(10890..11726)
                     /locus_tag="R8X70_000522"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEF2928331.1"
                     /translation="MNIFTTTLKNNIKTLAIGCFDGVHLGHRKLIECLDDSGALLIID
                     KFKGKKLCTNQDKAFLAQKEIIELDFENIKALDGKDFLQALKEEFVNLERIVVGFDFS
                     FGKNRSYKAKDIEALSGIKTTIIDEFKLDGVGVHASLIKEYLTQGDIKKANSFLGRNY
                     AIKGKLIKGQGLGSKELFATLNLECEEYFLPKNGVYASIVSFHDKRYKSVSFVGVRSS
                     DMQFAIESHIIEKFDESLAIGEVLELEFVEFLRENQKFNDLAQLKEQISKDINQAKEC
                     LG"
     gene            complement(11695..12444)
                     /locus_tag="R8X70_000523"
     CDS             complement(11695..12444)
                     /locus_tag="R8X70_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEF2928332.1"
                     /translation="MRYDIFVAKRLNLSRNKALELIENEEILLNSKPYKASFDVQNLL
                     KNKIADQEELLNSKELNLELLGELYVSRAAFKLKYFLENHNINIANKTCLDIGSSTGG
                     FVQILLEHKALKVSALDVGDNQLHPSLRDDKRIEIIENTDLRTFKSEQKFDFITCDVS
                     FISLAYLLSYIDNLALKDIVLLFKPQFEVGKQAKRDKKGVLKDEKAVFKAMREFENAC
                     ARLGWILQCCEESKIKGKEGNIEYFYYYTKK"
     gene            complement(12441..13445)
                     /locus_tag="R8X70_000524"
     CDS             complement(12441..13445)
                     /locus_tag="R8X70_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928333.1"
                     /translation="MSLLKNNIQLFVLLSIFAFLFFWQKFAWVSLFLIPIFLAFFLEF
                     FYFLRLRKNIIKEATMIKDSLIYRVSAGDFYIYSLSFFMALFALASLFLNLISFEKQD
                     GFFLFVLLPLFLFFFKQKLQLQFLDNAYNDFRIIILSSLILALLYAIFNGVVNPIQSF
                     NLEDFNQSIIYYKNSKFFIFDLISQILTLINALKEYFLYSLGLFWFRVLNFIFDFINF
                     FIFCSFVAYLYNFAFKAKKKTYVFVFSFFITLASFFIIEDKNQNPKAYQKELVLMMNN
                     LSFLKEQNLSMLQNDKDRLVKNLKQVQELLDKNAFEIGIWWFSKEKEELQKALNESLQ
                     "
     gene            complement(13426..15369)
                     /gene="ligA"
                     /locus_tag="R8X70_000525"
     CDS             complement(13426..15369)
                     /gene="ligA"
                     /locus_tag="R8X70_000525"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEF2928334.1"
                     /translation="MTKKEYLEKVALAASWMRAYYEKDEPLASDEEYDALIRELRVFE
                     EQNKDEISKDSPTQKIAPTIQSEFKKIAHLKRMWSMEDVFDESELRAWAKRAKCEKNF
                     FIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGE
                     NTLNFTKHSEVMQFIRELGFLKDDFIKLCANLDEVLKAYNELLSLRDQKPMMMDGMVV
                     RVDDLALCKELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKERRDGLELDIARP
                     RFCPTCKSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHK
                     KITTLESIFHLKFSDFEGLEGFKEKKINNLLNAIEQARECELFRFITALGIEHIGEVA
                     AKKLALSFGKEWHKQSLEAYANLEGFGEQMALSLCEFSRVNSARIDEFYKLLNLKEQK
                     VQIQEDSVIFGKTFVITGALSRPRDEFKNLIESLGGKVSGSVSKKTDYVLFGQEAGSK
                     LDKAQELGVKCIDENEFNELIEK"
     gene            complement(15370..16512)
                     /gene="folP"
                     /locus_tag="R8X70_000526"
     CDS             complement(15370..16512)
                     /gene="folP"
                     /locus_tag="R8X70_000526"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEF2928335.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTQIHFILIKDIT
                     TPAANILKQDALRVGAELITHKEVITAKITHSNTLLMATKEQIQKLINKEKLQDFGLK
                     NLARFLENGFSKPKQAELMAVINVNEDSFNADSRVSYKDFEERLNEILALNPEYIDIG
                     AVSSRPKSVYCGKEEEFRRLKNVLDLIYDKNYYEKAIFSLDSFDEYCLEYALNKGFKF
                     INDISSLRNLNLAKLASKYNAKYCLMHMQNDPLTMQDDPRYDDLLDEMSSFFKEKLEI
                     LDTLGVKESILDVGIGFGKSAEHNMILIKHLEHFLQFKKPLLIGASRKSVINAYYESE
                     VKDRLAGTLYLHLKAFENGASIIRVHDLYEHKQLFAMANAMQSIGV"
     gene            complement(16509..17120)
                     /locus_tag="R8X70_000527"
     CDS             complement(16509..17120)
                     /locus_tag="R8X70_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEF2928336.1"
                     /translation="MFVSKIIITDDFDGIRAELLKQFHPNSLRFIPKEVASEFLIDDA
                     KAVEKESYIAETSEKIIVLMANSFRIEAQNFLLKLLEEPPKNIKFLIVVPSKNLLLPT
                     IKSRLICEKRNKIKAKNTLNLELNKMDLKTLFEFLQENENLDKAELMEKIALIAEESV
                     KFKDFNADELEFFYESYELAKLNSKSSLILATLLLNYYTKNEK"
     gene            complement(17120..17653)
                     /locus_tag="R8X70_000528"
     CDS             complement(17120..17653)
                     /locus_tag="R8X70_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004292099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HEF2928337.1"
                     /translation="MSDFLSFTLENIRNGGTFMAWMESRRLEWAPLMAARLRYLLEGR
                     TFVLMCDEQRAWYEEYFLANINSKTTRPMLPFVSLKSLCKKKIQNIEDIALLNDLLDI
                     SFPNGFIYFYIGSASDKKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDVKLITLY
                     KLFDTSLDAILFSKVSL"
     gene            complement(17654..18856)
                     /locus_tag="R8X70_000529"
     CDS             complement(17654..18856)
                     /locus_tag="R8X70_000529"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEF2928338.1"
                     /translation="MLIVQKYGGTSVGTLERIDAVAERVIKSAKEGHQLVVVVSAMSG
                     VTNTLIEQAEYFSKNPNGKDMDMLLSSGERVTSALLSIALNERGYPSLAFSGRKAGII
                     TDSVSTKARISYIDTQAITKALNEGKIVVVAGFQGVDKEGDVTTLGRGGSDLSAVAVA
                     GALKADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVKLVTRSSFNDNEGTMITKEDGMEQALVSGIALDRNQARVTLRNIEDKPGIAAE
                     IFSVLADENINVDMIIQNVGVDGATNLGFTVPQNELDLAKNAMQKILGSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            complement(18856..19326)
                     /locus_tag="R8X70_000530"
     CDS             complement(18856..19326)
                     /locus_tag="R8X70_000530"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEF2928339.1"
                     /translation="MEKEKKYRPNVAAIVLSSAYPFECKLFIAKRSDMDNIWQFPQGG
                     IDEGEDPKSAVLRELKEEIGTDEVEIIAEHPEWLSYDFPEKVAKKMYPYDGQSQKYFL
                     VRLKHGAKININTKHPEFDAYQFVGVKQVFEIINHFKRNIYVKVIKYFEEKGYI"
     gene            19421..20488
                     /locus_tag="R8X70_000531"
     CDS             19421..20488
                     /locus_tag="R8X70_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HEF2928340.1"
                     /translation="MHLYIHIPFCESKCHYCAFTSLKKHDYENRYFEALYEDISFHLQ
                     KLNIKKNSIKTLFIGGGTPSAVSAKNFEMILTLLEPFLSKNIEFSSEANPNSADIEWL
                     KTMKNLGLNRISFGAQSFHPKKLEFLGRIHDQKMIFKALENVNKLGFKKINLDLIYDT
                     KLDDKKMLEFELEQLKQIKNLITHLSAYNLTIEPLSAFAKKEHFKKNAPYLMKFFIQE
                     LQNLGFLQYEISNFAKNNAQICKHNLAYWKGLDYLGCGLSAVSCYKNERFYTAKNLKS
                     YLQNPIFRDVEKLNQEDLNLEHLFLGLRSIVGIKECKLSKIQKEKANLLVREKKLKFE
                     KGRYYNLNFLISDELALYLSS"
     gene            20551..20955
                     /gene="tatB"
                     /locus_tag="R8X70_000532"
     CDS             20551..20955
                     /gene="tatB"
                     /locus_tag="R8X70_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HEF2928341.1"
                     /translation="MSFGEIIVILIVAILVLGPDKLPEAIVQIAKILKALKRNIDDAK
                     SSIEKEVRINDLKEEAKKYKDEFSSTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RENSTPSPNEQNPNENQKPKLNPFENQEKVEK"
     gene            20956..21702
                     /gene="tatC"
                     /locus_tag="R8X70_000533"
     CDS             20956..21702
                     /gene="tatC"
                     /locus_tag="R8X70_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEF2928342.1"
                     /translation="MFEELRPHLIELRKRLFISVACVIVMFIVCFAFRSYILDVLKAP
                     LIQALPEVAKHVNVIEIQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFALGACFCYFIVVPLAFKFLINFGLSEDFNPVITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKIGLIDDSFLKRHFRIAVLAIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPAPKDEEKEESDK"
     gene            21699..22724
                     /gene="queA"
                     /locus_tag="R8X70_000534"
     CDS             21699..22724
                     /gene="queA"
                     /locus_tag="R8X70_000534"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEF2928343.1"
                     /translation="MKDLLLSSYDYTLPNELIATYPVHPKEDAKLLVFERKNNQISHT
                     TFKNLQDFLPDCALFFNDTKVIKARIYGNKSSGGKIELFLHQPCLDSQDSLFLAQIKG
                     RVKKDEILSFEQNLKAKVIELLDDGLRKVQFFQNDEVLNTFKLYELLDTIGHVPLPPY
                     IKRSDEKSDLEDYQSIFAKNLGAVAAPTASLHFSENMLENLKKRHEIYHLTLHVGAGT
                     FKSVECENLENHKIHSEFFDIPKKACEVIDSQKKILGVGTTVTRTIEYYARTKQNQGF
                     CDLFLHPHNPPLRQDYLLTNFHLPKSTLIMLVSAFIGRQNCLKLYDIAIKEKYRFYSY
                     GDAMLIL"
     gene            complement(22727..23680)
                     /gene="lpxD"
                     /locus_tag="R8X70_000535"
     CDS             complement(22727..23680)
                     /gene="lpxD"
                     /locus_tag="R8X70_000535"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEF2928344.1"
                     /translation="MRLKEIAEFLSLEYEGEDIEITALNSLLRANFTELTYCDGERNI
                     KDIPNTGAAAILVAKEYENLVPKDTKALITQSPHLCFAFLSKIFAKPLFSNAKEKVQN
                     IAKSAKIMPNVYIGNNVNIGENVVIMAGAYIGDNVSIGEESIIHPNVVIYNDSKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVILEDFVEIGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCDIGQNCIIVAQTGISGSSELGRNVVMGGQSATSGHLRIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAMKFKE"
     gene            complement(23677..24141)
                     /gene="ilvN"
                     /locus_tag="R8X70_000536"
     CDS             complement(23677..24141)
                     /gene="ilvN"
                     /locus_tag="R8X70_000536"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEF2928345.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLPGGEFS
                     RINIVTFGDERVFEQIVKQLHKLIPTYKVIERDEFIEKEMALVKIPLSENLGGLDAVL
                     KAYNGTIANSNENFLFLLVADDTNRIENFLKTIKKYNPSDIVRSGSVLMELK"
     gene            complement(24138..25838)
                     /locus_tag="R8X70_000537"
     CDS             complement(24138..25838)
                     /locus_tag="R8X70_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HEF2928346.1"
                     /translation="MRKISGSAMICEALKEENVKIVFGYPGGAALNIYDEIYLQKYFK
                     HILVRHEQAAVHAADAYARMSGEVGVAVVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIAKSGRKGPVHID
                     VPKDVSAALGIWDYPKEISMKTYKPIYKGNSKQIKKLAENLEEAKRPLFYLGGGCIAS
                     NAANEIRELVKITQIPAVETLMALGTLRSDDELNLKMAGMHGSYTANMALSECDLLVA
                     IGARFDDRITGKTSEFAKHSKIVHIDIDPSSISKIINAHFPIVGDIKEVVKELLEELK
                     KNQFKSNIHEWRQTLKRYDELYPLAYEDSDEVLKPQWVIQECAKLAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAYENGIKTINIILNNSFLGMVRQWQSMFYEEHFSATDLSLQADFIKIAEGFGCE
                     GYNIKTKDEFRTAFKQALESNKTSLLNVFIDRFEDVLPMVPAGGAIYNMILPKLKDKQ
                     "
     gene            complement(25916..26359)
                     /locus_tag="R8X70_000538"
     CDS             complement(25916..26359)
                     /locus_tag="R8X70_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEF2928347.1"
                     /translation="MNLKEQILNDIKEAMRQKDDFKRDTLRTLNAAFKQVEVDERIEL
                     SDERILKIIASEIKKRKDAIELYSKGGREDLAQKEQKEIALFESYLPQQLSDEELQAA
                     LKEMIANLGVSSLKDQGLVMKEAKAKFGARVDGKRLNVTLRELLN"
     gene            complement(26376..27395)
                     /locus_tag="R8X70_000539"
     CDS             complement(26376..27395)
                     /locus_tag="R8X70_000539"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HEF2928348.1"
                     /translation="MKFVSIEQAIKDLQEGKMLVMVDAEDRENEGDLIFPAQFSTKEK
                     VNFMIKEARGVVCVALAEELARKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RDMTIKIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCHLAGLKQACV
                     ICEIVKDDGDMARRSDLEEFCTKHNLNMIAVSDIIEYRLKNESLIKLQEKSDAILAGF
                     KAQKFIFTDHNNAQHIAFAFKEIQKCENVKFHISGSDFELLTSDKFSKLLDQIRFLSE
                     NGGVIVFMQGEKSSVTQFKNYGIGAQILRYFGIEEIKLMSQSCDKDYIGLKGFGLNLK
                     ICNFN"
     gene            27502..27576
                     /locus_tag="R8X70_000540"
     tRNA            27502..27576
                     /locus_tag="R8X70_000540"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:27534..27536,aa:Gln,seq:ttg)
     gene            27608..27683
                     /locus_tag="R8X70_000541"
     tRNA            27608..27683
                     /locus_tag="R8X70_000541"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:27641..27643,aa:Met,seq:cat)
BASE COUNT         9273 a         5151 c         3631 g         9730 t
ORIGIN      
        1 ttctatttaa aattattaaa aaatatataa aggagtttta aatgcctttt gtaaatatac
       61 gcattaccaa agaaaacggt gaacctacaa gcgaacaaaa acaagagctt atcgcaggag
      121 tgacagattt actcgctaaa gttttaaaca aaaacaaagc ctcaaccgta gtaatcattg
      181 atgaaatcga tacagacaat tacggcttag gtggaaaaag tatcactcaa gtaagaaaag
      241 aaaaaagcta gtttatatct agcttttgag tattgtcctt aaattcaaac tctacctttt
      301 ttgctccaaa acctttggct atagcttcta aagtatctct agcacttttg tgaattttac
      361 tttctaaatt tctaataaga tttaatgaca attctttaac ctcttctttg gcttctctta
      421 taagtttatt tttgtcattt tcactaaagc taagtcctgt gctattaata gaatcaggca
      481 gtaaaaaagg caaaaattta gcattttttt catcataaaa tttcatatct ataatgctgt
      541 gcttgtattt gcattcaggc ataataatct tataatgatc attatctaaa actatgattt
      601 caaaattttt atctcttaaa tcatataaaa atgtgatctc aaattcaaaa atcaaagcaa
      661 tctgtctttc gcttaaagac caacccaaaa tacttttcca aattccgtta aaagcactat
      721 cttttttagt aacaatttct ttactaaaga cttgaaaaac actaagctct cctatggatt
      781 taagttgggt aatatcattg ctaatatgaa tgtccttctc ttctatttta gagctatttt
      841 taaactgctt tataatgaca aatacaagca aaataacaat caaactaagt aaaatgagtt
      901 ccataaaatc acctttctaa agaattataa accttgatta gaaaaaatat aatttctttc
      961 aaatatcaaa aaaattatag catttaaaat aaaaatacag caaataaaag caaaaacaag
     1021 ttctacacta aaatgcgctg ttatcaatcc tcctccaaaa gcaccgcaaa aatttcctaa
     1081 aaactgacaa gtttgattaa agccaaatac aaggcttaaa tttttagcac taacaccttt
     1141 tttaagcaaa gcattcacgc aaggcaaaag tcctccaaga cctattccta taagcaatct
     1201 tacgaaaata agtgcataaa cattggtagc caaggattgt aaataaaaac aaattccaca
     1261 aaatatcaaa gcgctaaaaa taaccttact agggccgatt ttatctgcta tttttccaag
     1321 ttttggcgca aagaaaaggt tgctaatccc acttgcagct acaactatac ctgcccaaag
     1381 agccaaattt tcaccttgat aaatttgttc tacataaaga cttaaaatag gcataacccc
     1441 aaaagttcca aactgaatga taaaagttgt gataaaaata ataacaataa gttttttatt
     1501 ttctttaaat tcttgagtat tttttttgct tctttttgaa tttttctctc atgaataaaa
     1561 agaaaaattg tcacaaaaga acaagcaagc aaaaaggcta ccaaatcaaa aactacacta
     1621 atgctaaaaa ttcctgccgc aactccacca aataaaggac ctaacaaact cccactgata
     1681 gatgcagtag aaagtgtccc caaagcataa gctacttttt ctttgggtgc tattacagcg
     1741 ataaaaacaa cagctgctgc ggtaaatcct gatacaatac ccgttaaacc tcgtatcaaa
     1801 accacttcca tagcatcatg agcaaaacta agccacagcg ttaaagctga cattcctaaa
     1861 cttgctcgaa gtagcatatt tttatagccg tattttgcac ccaaatatgc ccacaaaggt
     1921 gaaaaaatag ccattccaag cggtgtgatt ccaaaagcta atcctgagta aaatgcgatt
     1981 tcgctagtat ctgtatgtcc taattctttg atatataaag gcaagattgg agcaatttga
     2041 ctaagtccca tacttgtagt aaagacgcca aaccaacata cccataaagt cctattgaaa
     2101 ttttccataa aattattgta tgatattttt tataattttc aattaaattt caaggatgaa
     2161 aatgaaaaag atagtttttg tatgtcttgg aaatatttgt cgttccccca tggctgaatt
     2221 tgttatgaaa gatcttgtta aaaaagcaaa tttagaaaaa gaatttttta taaccagtgc
     2281 tggaacctca ggagaacacg atggagaaaa tatgcactat ggcactcaaa ataaacttaa
     2341 aagcttaaat ataaaatatc aaaattttac aagcaaaaaa ctcactcaag cactttgtga
     2401 tgaaagtgat tttttaatca ccatggataa ttctaatttt aagaatgttc aaaaaaatta
     2461 taaaaatact caaaataaac ttttaaaaat cactgatttt gcttctcatt taggatatga
     2521 tgaagtccct gatccatggt atagtgggaa ttttgatgaa acctatcaaa tcatttcttt
     2581 agcgtgtaaa aatcttttaa gccatctaca aaaataaatc atttatcttt acaatattta
     2641 aatatatatc tttctaacat agaggaattt ccagaaattc ctccttggtg gatataaagc
     2701 aagggatttt tccattctct ttttaaggct atgctcaatc ctagcatgtc ataaagcaag
     2761 tcaaattcta tttgacattc ttgttttaaa tctttataaa gctgataaaa ttctagataa
     2821 agtttagcaa aatgatattt tttatcactt tttagaattt ctaaattcga aaaatcataa
     2881 tttttaataa gatttaaaat ttgagtttta aggtagcact catctccaac acaagcacaa
     2941 gtaaaaactt taaatttgga atttttagct aaaaatgcag ccgaagttcc tgtgccagag
     3001 ggtagaaaaa tatcaaaatc taaacctaaa tttttacttt gactttctat ttccttggct
     3061 agttgaatat aacctgattc ggcatttaaa ttagcaactc cttgctctat aaaaacatca
     3121 tctttttcac acaaagaaag tgcaaatgtt tttaagtctt tatcgctatg attttcaata
     3181 aaataaacat tattttccaa ggctaattta taattaccgc aaggattatt tcttagataa
     3241 gtaggaatct tttcgcaagc ataaataaga gttaaatttc ttttacttgc aaatatgcta
     3301 agtgctacta aagcattact ttgaatgcca ccataactta taaagcgttg gctctgatta
     3361 taattttgag aaaggtaaaa agcaagtttt ctagctttat ttccattgat ctctcctagc
     3421 aaatcatcac gcttgatata aaattcaaat ccttgaaatt gaattttttc tataggagaa
     3481 attagcattt aaaattctta gtgaaactca aaaaactttt caacatcttt taaagcatta
     3541 tcatttttaa tactgaattt aatctctatg cggcggcttt tatctttatc ctctactcca
     3601 tttacaagaa caggatcaga aaacgatctg ccacttgcca tcaaaagttt ttgcaatctt
     3661 atatccttat aaaaagtata gataaaattc atcacttcat aagcacgctt ttgggataaa
     3721 tcaagattat aaatataaga tccatcgcta tccgtatgcc cttcaatgat aatattttca
     3781 atattagaca aaatctttgg atcattgata atagcattaa aatactcact taaaattttt
     3841 ctcaaactcg ccttagcttc atttttaagc gtataagaat ccttatcaaa caatacctca
     3901 gaaggtaaag aaatagaacc tgttttttga tctatggtga tattgctatc gagtttagct
     3961 tgtagctctt tacttagatt ctcgcgaatc aaacttaaat tttgaacctt ttcttttgct
     4021 ttatcaaagc tttcttgcaa atttctaatt tcttcatctt tcttttctag ctgacctagc
     4081 aaaatcaaaa tttgcttatc tttattatct atagatgaat taagctcttt gcttaattgc
     4141 tcataattag tgatatttgc ttcaagttct actttttgag aatttataag atttaaagca
     4201 cttgaagcat tgtttaaatc agagcttaat ttaaaaacaa tagcttcttt atttctaagc
     4261 tcttccttac tttcttctaa gcgtgcttct tgtttgttaa gattatcttt aatttctctt
     4321 agatcgcttt gagttaaaac gtatttaacc acaatagcac ctattaacag gataaaaaca
     4381 aaaagtagcc ctgccatcaa gtcagcatag gctatccaaa aattaccttc ttcttgctca
     4441 tttttcattt atcttctttt tcttctttat taaaattttt attagaatct aaagtgtcgc
     4501 tatcattttg attttctttg gtttgctctg tattttcagt tatcttttcg cttgaaagaa
     4561 tttcattttc tatattatct tgctcttctt gagcaggatt aggaatttta cctattttag
     4621 ccatcacttc atttgtttct tcatttaaat tcttaatttc ttgctttaat ttatccatca
     4681 ttttgatttt cgcatcgata cttttttctt cttcataaac ttctttaaat ttatgcatac
     4741 cctcaaaaag acttgcttta aaaccttcaa aaactttttc ttgactttct aaaatggctt
     4801 tttcatataa ttcaaaattt ttaccaaaac gatctacttt ttcatcaaaa gcaagcaagg
     4861 ttttatcaaa atgctgaatt ttttcactac tgatatcaag aaggcggtta tattgttcag
     4921 acattcgcat attgatttct tttaaatttt gattaagcat tcctatacca tttagcattt
     4981 cgccatacat ttttccaaga tctctttgat ctctttgtgc tctacttaac tcacccatag
     5041 tttgcttaat atgctcccca ctcaatctta tagctttttc ttctacattg agcatatctt
     5101 gaaaaattcc aaattttcta tctatagtat gatcaagctc tgcaaaaaaa tcttgattgc
     5161 ttacttgttt aaaaatggca ctgatttttt caaaatgttg caagctttca ctcaaatatc
     5221 tttgatcaag ctcttctttt gtccaaaaaa atccacttgt agaatttttt tgacgattta
     5281 acaaacgctc gatcttactc tttccaaatt tttcaaaaaa catccaccaa agagctagaa
     5341 aaataccata aattgaaaca taaaaagcag ttcctacacc acttagcaaa agagcgatct
     5401 cttgctctaa ggctgctgta tcgctagagc taaaattagg catagacaag gctatactga
     5461 taaaagttcc taaaattccc atcataggaa aaatagctgc accaatacta gcaaagtttt
     5521 cattccttgc acccctaaca taagcataag caaaatcatc aaaatttgca ttagattttg
     5581 tatccttacc tatagtaaga aaatgcttca taatatgtct ttttaaggct tgtttaaatt
     5641 catctttttg ttgttcaaaa atgctgtatg cgtattcaga actatgcctt gcaaacacaa
     5701 gggctgtgaa aaaaataaag cctatcataa caacagtgtg caattcgact ttaaaattta
     5761 taatatcata ataacccaat aaaataaaaa cataaagtaa agcgggtata aaaataattt
     5821 ttaaataaac caaatatcct tttttctctt tactttctgg cagaatgagt tctgaaattt
     5881 catccgatct tatatccata acactaatac cccattagct aaattctatt ttaaagattg
     5941 ttatcaagca atttaaaaaa tctttaaaat aaaatttgga agatttaagc caaaggctta
     6001 atttcttcct atacaattta aatcttcaaa agcaagttct aaacgcttta tcatactttc
     6061 ctcaccgctt cttagccaaa cacgcggatc gtagtatttt ttattaggct tatcttcacc
     6121 ttctggattg ccaatttggc cttgcaaata ttcacggttt tttgcttcat attcgcgaac
     6181 tccgtcccaa aatgcccatt gagtatctgt atcgatattc atttttacta caccataact
     6241 caccgcatct ttgatatctt ttaattcgct tccacttcca ccatggaaaa caaaattgat
     6301 cggcttatca acttctaggc caaatttttc ttttacaaat ttttgtgaat ttttaagaat
     6361 ttcaggttgt aaacttacat ttcctggttt ataaactcca tgtacatttc caaagctggc
     6421 tgctattgaa aatttatcgc tgattttccc aagtctttca tatgcaagtg ctacatcttc
     6481 aggctgggta taaagcttag aattatcaat acctgtatta tccactccat cttcttctcc
     6541 cccagtgcaa ccaagttcaa gttcgagtga aattcccaaa gaatcaagtt ttttaagata
     6601 tgtttcgcaa gtgcttagat tatcttctaa atcctcttcg ctaaggtcaa gcatatgaga
     6661 gctaaataaa gcctgtccgt gagttttttt gtactcagca tttgcttcta taagtccatc
     6721 tatccaaggt aaaagctttc tagcagcgtg atctgtatgt aaaatcactg ggataccata
     6781 agccttagca agcaaatgca catgcttagc cccgctaatc gctcctaata catcaccttg
     6841 tggacaattt tttcctgcat aaaatttcgc tcctccatta gaaaattgga tgataacagg
     6901 agaatttact tttttagcag cttctaaaac agcattgatc gaatcagttc ccactacatt
     6961 aacggcaggg atagcaaaac cctgtgcttt agcgtattca taaactttat taagctcatc
     7021 tccgctaaca acccctgctt ttacgatgtc taacaagccc attatttgta ttccacttta
     7081 gcattgttta acaaatcttg acctttttga ttgatcactt ttttaaattc ttcaaatttc
     7141 aaaccatttt caatgccttt tttaacatca tcaaatttga tttgttcttt tgcacgagaa
     7201 ttttctttta agattacatg atagccaaaa tttgttttta caggagtggt tgtaatggtg
     7261 ccatttttaa gtgcaaatgc tgcgtcagtg aatggtttta ccattgttga ttgatcaaac
     7321 caacctaatt ctccaccttg attttttgaa cctggatcga ttgatttttc ttgagcaagc
     7381 tggctgaatt tatcatctaa agctttacct tttaaacctt tgagttcttt aatgatatct
     7441 ttagcttctt gttcgctaga tactaaaatg tgcttagctt gaactgcagc aggtttgata
     7501 tatttttctt tattttgttc gtaaaatgct ttaactttag aagaatcaac tttaatagaa
     7561 ttaagaattt tttcttgata aacattaaca agtatgctat cttttgcgcg ttctaattct
     7621 tttttataaa gaggatcttt ttctaaattt tgttttttag catcttgtag tatcaaatct
     7681 tgcatgatgt attgttgcaa aagagccttt ttttgatgat caggcaagct tttaaaatcc
     7741 tctcctctaa gcatcggtgc aaaaaattca ctcacttcag tatcgcttat atttttacca
     7801 tttacagtag ctatagtagc tgcatttaaa tttaaagtta cacctgcaat taaagctgcg
     7861 gcaattaaag aaacttttct cattttagac ttcctttttt aataaaatag attaaaatca
     7921 attatatctc aacttggttt aaagctaatt aattaaaata aaaaaatgaa aagaaattca
     7981 gaaatcaaag aacttttttt aaaacatttt gataagccta ctacagaatt aaagttttca
     8041 aatctctatg aacttttagt ctgtgtgatg ctttctgcac aatgcaccga taaaagggtt
     8101 aatcttatca cccctgagct ttttaaagct tatcctgata tcacaagtct tgcaaatgca
     8161 aatttatcaa gccttaaaac ctatatacaa agttgttctt tttataataa caaagcccaa
     8221 aatctcatca aaatggctca atcagtccgt gaaaatttca acgccgaaat tccactggat
     8281 gaagaaaaat taaaatcctt agcaggagta ggacaaaaaa cagcccatgt ggttttgatc
     8341 gaatggtgtg gtgcaaactg catggcagta gatactcatg tttttcgtgt ttctcatcgc
     8401 ttaggactta gcaaggctaa gacccctgaa gcgactgaag aggatttaac acgcatattt
     8461 aaagacaatc ttaactatct tcatcaagcc atggtgcttt ttggacgcta tacctgcaag
     8521 gctaaaaaac ctctatgtaa agaatgtttt ttaaaccatc tttgcaaaag taaagacaag
     8581 gaacttgaat gaaacttatc atctttttat tagcatttac acttcatgtt tttgctttag
     8641 aagcttataa gcccgataaa gattttgcgc cttattttaa tcctttaaat tgctctgttg
     8701 ttttggataa atttttttat accaattgtt atgattataa actcaaaggc actaaagccg
     8761 tagcctataa agtcgaagcg tccaatctaa aagaaaaaca gatcaaaaaa cgagctcgct
     8821 ttgaagatga cacaaatatc cctaaaaaat accgcagtac ttggagtgat tataaaaata
     8881 gtggttatac ccgaggacat atagcctcaa atgcttcttt tcgctttagt aaagcagcac
     8941 aaacatcggt ttttttgatg agtaatatca ctccacaaaa tgcacaagtt aatgcaacgg
     9001 tttggaatga aatcgaacaa agagaaagaa gtcttgcttt taaattccaa agcgttgaag
     9061 tgctaaatct aatactttat ggtaaaaatc ctaaatttat taaaaatggc attgctatac
     9121 cgagttctta tgttaagatt atcaaaactt ctcggtttga agaatgttat gaagtaccca
     9181 ataacaatat ccagagcgaa gaaatcaatg attataaaat ttcttgcaat aaattctaaa
     9241 ggctatgaat ggaaatcagt gctttaacca taaccatact ttacattata ggaatttcag
     9301 cagagggtat gacaggtgcc ttggctgcag gcagacataa aatggatctt tttggagtaa
     9361 ttttcatagc cttagtaact gccataggag gtggaagcat acgcgatgtg cttttaggtc
     9421 attatccact tacttgggtt aaacatcctg aatatattgt tttaatttgc ctttgtgctc
     9481 ttgttgccac taaaattcca cgcattgtta gcagattaga aagtttattt ttaacgcttg
     9541 atgccatagg acttgtagtc tttagcatac ttggcgcaca aattgcaata gaacaaaacc
     9601 atggctttat catcgcaatc tctgcagcag tgattacagg tgtttttggt ggaattttaa
     9661 gagatatttt atgcatgaga attcctttag ttttccaaaa agaaatttat gcaggaatcg
     9721 caatcatagc aggggtaatt tattatactt taatggttta tcttcaactg catgctttaa
     9781 tttgcacgct tgtaacgcta tttgtaggag ttacagctag gcttttagcg atcaaatacc
     9841 aatggtcctt acccattttt tcttataatg aggaaaaata atgaattgta tttataaaaa
     9901 tttgctaaga taaaaagaag cgtgataaaa gtttaattat gctttttaag gaaaatacta
     9961 tgaataaagc aatactactt acccttattt gtttattttt tacagcttgt gaacaaacca
    10021 aaagtgtaga atactacaaa gctcatcccg aagaagccaa aaaaagaagt gatgaatgtc
    10081 gtttgaaatc tatcatcagt caagattgtg taaatgctca tagcgttgct atcccaaaag
    10141 aagattggga tgaaggccat gatacacaaa caagataatt tttatttaaa ggctataaag
    10201 gtttcaaaat taacccactt aaaaacactt tctatttttt caaatcctgc attcttaagc
    10261 atatctaaat tttctttttc actataaggg ataagaacat tttccaaagc ctcccttttg
    10321 gctgcaattt cgattttaga ataaccttgt ctttctttat aatctgcata aagttctatc
    10381 atatttttag acaaaaaagc atcttcataa agaatttttt cactcatgat aaaaatacca
    10441 cctttgttta aattcttata aatttcatta acaagttctt gtcttttagg cggacggatg
    10501 aattgcaaag tataattagc tacaaataca tcactttgaa aaaaaacaaa atcacacaaa
    10561 ttcgcttcaa aaaattctat atttaagcca taagcttgtg cttttgattt ggcgatttca
    10621 agcatagaag gtgcattatc cgcaccaaaa agcttaagat cttttcttaa gctggctaaa
    10681 aaaattaaaa aattcgcact agaacaaccc aaatcacaaa cctttgctcc ctctttagtc
    10741 aattttttta tcaaatttgc acaaagttct aaattttccc tataaaaagg cacagagcga
    10801 ttaatcatat catcaaaaac acttgcgaca ctcttatcaa attcaaattg tttggttagc
    10861 ttttctttaa aaagttcatc tttcattttt tatcctaaac actctttagc ttgatttata
    10921 tcttttgaaa tttgttcttt aagttgggca aggtcgttaa atttttgatt ttctcttaga
    10981 aattctacaa attcaagctc caaaacttct cctatagcta agctttcatc aaatttttct
    11041 ataatatgac tttctatggc aaattgcata tcactagagc gcacacccac aaaacttaca
    11101 ctcttatagc gcttatcatg aaaactcacg atgctagcat aaacgccatt tttaggtaaa
    11161 aaatattcct cgcattctaa atttaaagtt gcaaaaagct cttttgagcc aagcccttga
    11221 ccctttatga gcttgccttt gattgcataa tttcgcccca aaaaagaatt tgcctttttg
    11281 atatcacctt gcgtcaaata ctctttaatc aagcttgcat gaacacctac tccatctagc
    11341 ttaaattcat ctatgatcgt tgttttaatc ccactaaggg cttctatatc ttttgcctta
    11401 taacttctat tttttccaaa agaaaaatca aaacctacaa ctatacgctc caaatttaca
    11461 aattcttctt ttaaagcttg taaaaaatcc ttaccatcta aagctttgat gttttcaaaa
    11521 tcaagctcta taatctcttt ttgagctagg aatgctttgt cttgattggt acaaagtttt
    11581 ttacccttaa atttatcgat aatcaaaaga gctccagaat catctaaaca ttctataagt
    11641 tttctatgtc ctaaatgaac tccatcaaaa catcctatgg ctaaagtttt aatattattt
    11701 tttagtgtag tagtaaaaat attcaatatt gccctctttt cctttgattt tagactcttc
    11761 acaacattgc aagatccaac ctaaacgcgc gcaagcattt tcaaattctc tcatagcttt
    11821 aaacacggct ttttcatctt ttaaaacacc ctttttatct ctttttgctt gcttgccaac
    11881 ttcaaattga ggcttaaaaa gcaaaactat atcctttaaa gctaaattat cgatatacga
    11941 gagcaaataa gctaaagaaa taaaactaac atcacaagtg atgaaatcaa atttttgctc
    12001 gcttttaaaa gttcttaaat ctgtattttc aataatttca atccttttat catcgcgtaa
    12061 actaggatgg agttgattat cacccacatc taaagcactt acttttaaag ccttgtgttc
    12121 taataaaatt tgcacaaaac cacccgtact tgaacctata tcaaggcagg ttttatttgc
    12181 tatattgata ttatgatttt ctaaaaaata tttgagctta aaagccgcgc gagaaacata
    12241 aagctcgcct aaaagctcta aatttaattc tttagaattt aaaagctctt cttgatctgc
    12301 tatcttattt ttaagcaaat tttgcacatc aaaagaagct ttataaggct tggaattaag
    12361 taaaatttct tcattttcta tcaattccaa agctttattt ctgctaagat ttaaacgctt
    12421 tgctacaaaa atatcatatc tcattgaaga ctttcattta aggctttttg caattcttct
    12481 ttctctttgg aaaaccacca aattcctatc tcaaaggcat ttttatccaa aagttcttgc
    12541 acttgtttta aatttttaac tagtctatct ttatcatttt gaagcatact taaattttgc
    12601 tcttttaaaa aagaaagatt attcatcatc aaaacaagct ctttttgata agcttttgga
    12661 ttttggtttt tatcctctat gataaaaaat gaagctagag ttataaaaaa tgaaaagaca
    12721 aaaacataag ttttcttttt tgccttaaaa gcaaaattat aaagataggc cacaaaggag
    12781 caaaaaataa aaaaattaat aaaatcaaaa ataaaattta aaaccctaaa ccaaaaaagc
    12841 cccaaagaat ataaaaaata ttcttttaaa gcatttataa gtgttaaaat ttgagaaatt
    12901 aaatcaaaaa taaaaaactt tgagttttta taataaataa tactttgatt aaaatcttca
    12961 agattaaaac tttgtatagg atttaccacc ccattaaaaa tcgcatataa caaagctaaa
    13021 atcaagcttg ataaaatgat tattctaaaa tcattataag cattatctaa aaactgcaac
    13081 tgaagttttt gcttgaaaaa aaataaaaat aaaggcaaga gtacaaacaa aaaaaatcca
    13141 tcttgttttt caaaactgat caaatttaaa aacaaagaag caagtgcaaa caaggccata
    13201 aaaaaactca agctatagat ataaaaatct cccgcactca cacgataaat caaactatct
    13261 ttaatcatcg ttgcttcttt tatgatattt tttctaagcc ttaaaaaata aaaaaattcc
    13321 aaaaaaaatg ctaaaaaaat agggattaaa aaaagcgaaa cccaagcaaa tttttgccaa
    13381 aaaaataaaa atgcaaaaat actcaataaa acaaatagct gaatattatt tttcaataag
    13441 ctcattgaat tcattctcat caatacattt tacacccagc tcttgagcct tgtcgagttt
    13501 agaacctgct tcttgaccaa aaagcacata atcagtcttt ttagaaaccg atccactaac
    13561 cttacctcca agactttcta ttagattttt aaattcatct ctagggcgtg aaagcgcgcc
    13621 tgtgatcacg aaagtcttgc caaaaataac actatcttct tgaatttgca ccttttgctc
    13681 ttttaaattt aaaagcttat aaaactcatc aattcttgca ctatttacac gagaaaactc
    13741 acacaaagaa agagccattt gctcaccaaa accttctaaa tttgcataag cttccaaact
    13801 ttgtttatgc cattctttac caaaacttaa agctagcttt ttagcagcca cttctccaat
    13861 atgctcgatc cccaaggcgg taataaaacg aaaaagctca cattctcttg cttgttctat
    13921 ggcatttaaa agattgttaa ttttcttttc cttaaagcct tccaaacctt caaaatcact
    13981 aaattttaaa tgaaaaatac tctcaagcgt agtgattttt ttgtgcttgt ataaaagttc
    14041 tactatattt tctccaagtc cgtcgatatt aagacatttt ttagaaacaa aatgaatgat
    14101 agaatttaca agtctatcct cacaatctat attttgacat tttattaaag ttccttcatc
    14161 caaaagttcg cttttgcaag tagggcaaaa ccgaggtcta gctatatcaa gctctaagcc
    14221 atccctacgc tctttaaaaa ctttagtgat ttttggtatc acatcaccac ttcttatcac
    14281 gcttacaaaa tcattgattt taacatcaag tcttgcaatc tcatcaaaat tatgaagtgt
    14341 ggctgatttt actacaaccc catctaaatt tacaggttct aaaaccgcca caggagtgat
    14401 cactccgctt cttcctactt gtaaatttac ccctattaaa cgcgtggttt tttcaagtgc
    14461 gggaaattta aaagctgcca taaattttgg aaattttacc gtatagccta gctctttgca
    14521 aagcgcaaga tcatcaactc ttaccaccat tccatccatc atcataggct tttgatctct
    14581 taggcttaaa agctcgttat aagcttttaa aacttcgtct aaattagcac aaagcttaat
    14641 aaaatcatcc tttaaaaaac caagctctct gataaattgc atcacttcgc tgtgcttggt
    14701 aaaatttaag gtattttccc ctactcccca aggataaaat ttcaaatttc tttctttagt
    14761 gatacttgta tcaagctgcc ttaaactccc acttgcagca ttgcgtggat ttgcaaataa
    14821 actttgattt aaaagggctc ttttttcgtt gattttctca aaatcatctt ttaaaatcac
    14881 cacttctcca cgaatttcta tcctttcttt ataggctata tttttaggta tattttctat
    14941 ctcaaaaaca ttaagcgtta tatcctcacc cacttcgcca tcgcctctag tggcgccgct
    15001 tactaattta ccattttcat aaagcaaatt taaactcgct ccatcaaatt taggctctat
    15061 aaaaaagttt ttttcacatt ttgcgcgttt tgcccaagcc ctaagctcac tctcatcaaa
    15121 cacatcttcc atcgaccaca tacgctttaa atgagctatt tttttaaact cgctttgtat
    15181 agtaggagct attttttgcg ttggagagtc ttttgaaatt tcatctttat tttgttcttc
    15241 aaaaactctt aattctctga ttaaagcatc gtattcttca tcgctagcca agggttcatc
    15301 tttttcataa tacgccctca tccaagaagc agccaaggca actttttcta aatactcttt
    15361 ttttgtcatt taaactccta tgctttgcat cgcatttgcc attgcaaaaa gctgtttatg
    15421 ttcgtataaa tcatgcaccc ttataatgct cgcgccattt tcaaaagcct ttaaatgcaa
    15481 atacaaagtc cccgctaagc gatctttaac ttcactttca taatacgcat tgatcacact
    15541 tttgcgactt gctcctataa gcaagggctt tttaaattgc aaaaaatgtt ctaaatgctt
    15601 gattaaaatc atattgtgtt ctgcactttt gccaaagcca attcccacat ctaaaatgct
    15661 ttctttcact cctaaagtat ctaaaatttc aagtttttct ttaaaaaaac tactcatttc
    15721 atcaagcaaa tcatcatatc ttggatcatc ttgcatggtt aaaggatcat tttgcatatg
    15781 cataaggcag tattttgcat tgtatttgct tgcaagttta gctaaattca gatttcttaa
    15841 gctactgata tcattgataa atttaaagcc tttgtttaaa gcgtattcta agcaatattc
    15901 atcaaaacta tccaaactaa aaatggcttt ttcataataa tttttatcat aaattaaatc
    15961 caacacattt ttaagtcttc taaactcttc ttccttgcca caatacacgc tttttggcct
    16021 agagcttacc gctcctatat caatatactc gggatttaag gccaaaattt catttaatct
    16081 ttcttcaaaa tctttataac tcaccctaga atcagcatta aaactatctt cattgacatt
    16141 tataaccgcc ataagctctg cttgctttgg ttttgaaaaa ccattttcta aaaacctagc
    16201 taaattttta agcccaaaat cttgaagttt ttctttgttt ataagttttt gaatttgttc
    16261 ttttgtggcc attaaaagtg tattagaatg tgtaatttta gctgtaataa cttccttgtg
    16321 tgttataagc tcagctccca ctcttaaggc atcttgtttt aaaatatttg ccgcaggagt
    16381 agttatatct ttaatcaaaa taaaatgaat ttgagttttt tcactcataa ttttttgccc
    16441 cattttatga ggatttataa aagagcaaag taagttaaaa tcagtgtttg gattgatttt
    16501 aaaaaatttc atttttcatt ctttgtataa taatttaata aaagcgtagc cagtatcaaa
    16561 gagcttttgg aatttaattt tgcaagctca tagctttcat aaaaaaattc aagctcatcg
    16621 gcattaaaat ctttaaattt aacactttct tctgcaatca gtgcgatttt ttccattaat
    16681 tctgctttat ctaaattttc attttcttgt aaaaactcaa acaaagtctt taaatccatt
    16741 ttattaagtt ctaaatttaa agtattttta gcctttattt tgttgcgttt ttcacaaata
    16801 agacgcgatt ttatagtggg caaaagtaaa tttttagaag gaactacgat gagaaatttg
    16861 atattttttg gtggctcttc aagaagcttg agtaaaaaat tttgagcttc tatcctaaaa
    16921 gaattcgcca ttaaaacaat gattttttca cttgtttctg cgatataact ttccttttca
    16981 actgccttag catcatcgat taaaaactca cttgcaactt ctttaggtat aaaacgcaaa
    17041 gaattaggat gaaattgttt taaaagttca gctctaatac catcaaaatc atcagtgatg
    17101 ataattttac ttacaaacac taaagactca ctttggaaaa taaaatcgca tccaaactcg
    17161 tatcaaaaag tttataaaga gtgataagct tgacatccaa atctttatct ttggaattca
    17221 aataaaaact atcttgcaat tgctcatcaa aaagccataa aagactatcg tcgcgtgatt
    17281 tagcgattaa tgatttctta tcgcttgcac ttcctatata aaaataaata aagccattag
    17341 gaaacgaaat atcaagtaaa tcattaagca aggctatatc ttcgatattt tgtatctttt
    17401 ttttacataa agattttaaa gacacaaaag gaagcatggg gcgagtagtt ttggaattta
    17461 tatttgctaa aaagtattct tcataccaag ccctttgttc atcacacatt aaaacaaagg
    17521 ttcgcccctc taaaaggtat cttaatcttg cggccattaa aggagcccac tctaaacgac
    17581 gggactccat ccaagccata aatgttccgc cattgcggat attttcaagt gtaaaactta
    17641 aaaaatcgct catttattta tcaagtccat agcactcatg caaggctctt accgcaagct
    17701 cgccatattt ttcatgtaca atcattgaaa ttttaatctc gcttgtagaa atcataccta
    17761 tattaatacc ctcatccgcc aaagctttaa aggctttact tgctacaccc gaatgtgatt
    17821 tcatacccac gcccactata gaaaccttaa ccacagcact atcactttct atagttgtct
    17881 tagaacctaa aattttctgc atagcatttt ttgccaaatc aagctcgttt tgaggcacgg
    17941 taaatcctaa atttgtagct ccatctaccc caacattttg tatgatcata tctacattga
    18001 tattttcatc cgctaaaaca gaaaaaattt cagctgcaat ccctggttta tcttctatat
    18061 ttcttaaagt tactcttgct tgatttctat ctaaagcaat accgctaact aaagcttgtt
    18121 ccattccatc ttcttttgtt atcattgtac cctcattatc attaaaacta cttctagtaa
    18181 ctaattttac atttaatttt tttgcaagtt caaccgagcg attttgtaaa accttagccc
    18241 ccaaactagc aagctcaagc atttcttcat aagaaatttt atcaagtttt tttgcctttg
    18301 gttcaatcct tggatctgta gtataaactc catccacatc ggtataaatt tcacataaat
    18361 ccgccttaag agctcccgca acagcaaccg cactcaaatc acttccgcca cgccctaaag
    18421 ttgtaacatc accctcttta tcaactcctt gaaagcctgc tacaacaact atctttcctt
    18481 catttaaagc cttggtgatt gcttgagtgt cgatataaga aattctagcc tttgtagaaa
    18541 cgctatctgt aataattcct gcctttcttc ctgaaaaagc aagagaagga tatccccttt
    18601 catttagtgc aatagacaat aaagcactcg ttacgcgctc accactactt aaaagcatat
    18661 ccatatcttt gccattagga tttttgctaa aatattctgc ttgctctatt aaagtatttg
    18721 taactccgct catcgctgaa actacaacca caagttgatg tccctctttt gcacttttta
    18781 tgacacgctc tgctactgca tcaatgcgtt ctaaagtgcc gacacttgtt ccgccatatt
    18841 tttgaactat aagcattaaa tataaccttt ctcttcaaaa tatttaataa ctttaacata
    18901 aatatttctt ttgaaatgat ttatgatttc aaacacttgt tttactccga caaattgata
    18961 agcatcaaat tcaggatgtt ttgtattaat attaatttta gcgccatgtt ttaatcgtac
    19021 taaaaaatat ttttggcttt gtccatcata aggatacatt tttttagcaa ccttttctgg
    19081 aaagtcataa ctcaaccatt cagggtgctc agctatgatt tccacttcgt ctgtgccaat
    19141 ctcttcttta agctctctta atacagcact tttagggtct tctccctcat cgataccacc
    19201 ttgtggaaac tgccaaatat tatccatatc gcttctttta gctataaaaa gcttacactc
    19261 aaaaggataa gcgcttgata aaacaatagc agcgacattg ggtctatatt ttttttcttt
    19321 ttccactttt ttccttcaat tttaaactta taattttaac ctaaatgaaa tcaaaatttc
    19381 attaaaataa gaaaataaca ttataaattt taaggttttt atgcatttat atattcatat
    19441 ccctttttgc gaaagcaaat gccattattg tgcttttacg agtctaaaaa aacatgatta
    19501 tgaaaatagg tattttgagg ctttatatga agatatttct tttcacttgc aaaaattaaa
    19561 tatcaaaaaa aacagcatta aaaccctctt tataggagga ggcaccccaa gtgctgttag
    19621 tgcaaaaaat tttgaaatga tcttaacact tttagaacct tttttaagta aaaatataga
    19681 attttcaagc gaggccaatc ccaattcagc cgatatagaa tggcttaaaa caatgaaaaa
    19741 tttagggctt aatcgtatct cttttggagc gcaaagcttt catcctaaaa agctggaatt
    19801 tttaggaaga attcacgatc aaaaaatgat ttttaaagca ttagaaaatg tgaacaaatt
    19861 gggatttaaa aagattaatt tagacttgat ttatgataca aaattagacg ataaaaaaat
    19921 gcttgaattt gaacttgaac aattaaaaca aattaaaaat ttaatcactc atctaagtgc
    19981 ttataatctt accatagaac cactgagtgc ttttgcaaaa aaggaacatt ttaaaaaaaa
    20041 cgcaccctat ttaatgaaat ttttcatcca agaacttcaa aatcttggat ttttacaata
    20101 cgaaatcagc aattttgcta aaaataatgc ccaaatttgc aaacataatt tagcctactg
    20161 gaagggtttg gattatctag gttgtggttt gagtgcggta agttgctata aaaatgagcg
    20221 tttttatacg gctaaaaatt taaaatccta tcttcaaaac cctatattta gagatgttga
    20281 aaaactaaat caagaagatt tgaatttaga acatttattt ttaggactaa gaagtatagt
    20341 gggtattaaa gaatgcaaat taagtaaaat tcaaaaagaa aaggctaatt tgcttgtaag
    20401 agaaaaaaag ctcaaatttg aaaaagggcg ttattataat cttaattttt taattagcga
    20461 tgagcttgcc ttatatctct catcttaaat tcaacttttt taagtaaaat gttcctttta
    20521 taaaatttca aatttttaag agtattgttt atgagttttg gtgaaattat tgtaatttta
    20581 atagtagcaa ttttagtttt agggcctgat aaacttcctg aagccatagt gcaaatagca
    20641 aaaattttaa aggctttaaa acgcaatatc gatgatgcaa aatcaagcat agaaaaagaa
    20701 gttcgtatca atgatttaaa ggaagaagct aaaaaataca aagatgaatt ttcaagtaca
    20761 aatgaaaaca tccgtaaaaa acttagtttt gaagaatttg atgatttaaa aagagatatt
    20821 ttggataaaa ctaaagtgga tttgactttt gatagcagag aaaattccac ccctagccca
    20881 aacgaacaaa atccaaatga aaatcaaaaa cccaaactca atccatttga aaatcaagaa
    20941 aaagtagaaa aataaatgtt tgaagaatta agaccccatt taatagaact tagaaagcgt
    21001 ctttttatta gcgttgcttg tgtgattgta atgtttatag tatgttttgc ttttcgtagc
    21061 tatatcttag atgtattaaa agcacctctt attcaagctt tacccgaagt agctaaacat
    21121 gtcaatgtta tcgaaattca agaggcttta tttacagcta tgaaggtaag cttttttgct
    21181 gcttttatct tttctttacc tgttattttt tggcagtttt ggaaatttgt agctccaggt
    21241 ctttatgata atgaaaagcg tcttgtagtg ccttttgtaa gctttgcaag cattatgttt
    21301 gctttagggg cttgcttttg ctattttatt gtagtgcctt tggcttttaa atttttaatc
    21361 aattttggtt taagtgaaga ttttaatcct gtaatcacca taggaactta tgtggacttt
    21421 tttacaaaag tagttgttgc ttttggcttg gcttttgaaa tgcctgttat agcatttttc
    21481 tttgctaaaa ttggacttat tgatgatagt ttcttaaaac gccattttcg catagctgtt
    21541 ttagctatct ttgtattttc agcctttatg actccacctg atgtcttatc tcaattttta
    21601 atggctggac cactttgcgg actttatgga ctttctattt taatcgttca aaaagtaaat
    21661 cctgctccaa aagatgaaga aaaagaagaa agcgataaat gaaagattta cttctttcaa
    21721 gctatgatta taccttaccc aatgaactta tagctactta tcctgtacat cctaaagaag
    21781 atgctaaact cttagttttt gagcgaaaaa ataatcaaat ttctcatact acttttaaaa
    21841 atttacaaga tttcttacct gattgtgctc tcttttttaa tgatactaag gtgattaaag
    21901 caagaattta tggaaataaa tcaagcggtg gaaaaataga acttttctta catcaaccct
    21961 gtttagattc acaagattcg ctttttttag cacaaattaa agggcgtgtt aaaaaagatg
    22021 aaattttatc ttttgaacaa aatttaaaag ccaaggttat agaactttta gatgatggct
    22081 tacgcaaggt gcaatttttt caaaatgatg aagttttaaa taccttcaag ctttatgaac
    22141 tccttgatac aataggacat gtgcccttgc ctccctatat caaaagaagt gatgaaaaaa
    22201 gtgatttaga agattatcaa agtatttttg ctaaaaattt aggggcagta gcagctccta
    22261 cagctagctt acattttagt gaaaatatgc ttgagaattt aaaaaaaaga catgaaattt
    22321 atcatttaac tttgcatgtt ggtgcaggaa cttttaaaag tgtagaatgt gaaaatttag
    22381 aaaatcacaa aatacatagt gaattttttg atattcctaa aaaggcatgt gaagtgattg
    22441 attcccaaaa aaagatttta ggcgtaggca ctacagtaac aaggactata gaatactacg
    22501 caagaaccaa acaaaaccaa ggcttttgcg atcttttttt gcatcctcac aacccgccct
    22561 taagacagga ctatctttta actaattttc atctaccaaa atcaactctg attatgttgg
    22621 tttcagcatt tataggcagg caaaattgtc ttaagcttta tgatattgcc ataaaagaaa
    22681 aatatcgttt ttactcttat ggcgatgcta tgcttatttt ataaatttat tctttaaatt
    22741 tcatagcaat ttttgcttga agtttaagcc aatctttttg aagcattata ggaaaacccc
    22801 cataaaccct accgccttca agatttttac tcacaccacc gcgtgctgca atagtgctaa
    22861 aatcccctat tcttaaatgg ccgctcgttg cactttgtcc acccataacc acattgcgtc
    22921 caagctcact tgaacccgaa attccagttt gtgcaacgat aatgcaattt tgtcctatat
    22981 cgcaattatg acctatttgg acaagattat ctacttttgt tcctgcttta atgatagtgc
    23041 tatcaaacac tgctctatct attgttgtgc aagctcctat ttcaacaaaa tcttctaaga
    23101 taacattacc attgtgatag attttataat gctctccatt tttattgtgc gcataaccaa
    23161 atccatcact tcctattacg caatttgcaa gtagatgaca ttttttgcca attttgctat
    23221 cattataaat caccacatta ggatggataa tgctttcttc gcctatgcta acattatctc
    23281 ctatataagc tcctgccata atgacaacat tttcgcctat attgacatta ttgcctatat
    23341 aaacatttgg catgattttt gcactttttg ctatattttg aactttttct tttgcgttgc
    23401 taaataaagg tttagcaaaa attttactca aaaaagcaaa acacaaatgc ggactttgag
    23461 taatgagagc ttttgtatct ttaggcacta aattttcata ttctttagca accaaaattg
    23521 ctgctgctcc tgtgttgggt atatctttaa tatttctttc accatcacaa taagtaagct
    23581 cggtaaaatt cgccctcaat aaagaattta aagccgttat ttcgatatct tcgccttcgt
    23641 attctaaact taaaaattcc gctatttctt ttaatctcat ttaagctcca ttaaaaccga
    23701 tccactgcga acaatgtcgc taggattgta ttttttaatt gtttttagaa aattttctat
    23761 acgatttgta tcatcagcta caagcaagaa aagaaaattt tcattgctat ttgcaatagt
    23821 accattataa gctttcaaaa cggcatcaag tccacctaaa ttttcactga gtggaatttt
    23881 tacaagcgcc atttcttttt ctataaattc atctctttct attaccttat aagtaggtat
    23941 aagtttatgc aactgcttta ctatttgctc aaaaacacgc tcatctccaa aagtaactat
    24001 attgatacga gaaaattctc cacctggtaa aggagcgacg gttaagctat cgatattata
    24061 tcccctacct gaaaaaagtc ctacgatacg agaaagcaca ccatgttcat ttaaaactat
    24121 aaccgataaa acacgtctca ttgcttatcc tttaattttg gtaaaatcat attataaata
    24181 gccccacccg ctggcaccat aggaagcaca tcttcaaagc gatctataaa tacgttaagc
    24241 aagcttgttt tattggactc taaagcttgc ttgaatgctg tgcgaaactc atcttttgtt
    24301 tttatattat atccttcaca tccaaaacct tcagctatct ttataaaatc tgcttgcaag
    24361 cttaaatctg tagccgaaaa atgctcttca taaaacatgc tttgccattg gcgaaccatt
    24421 cccaagaatg aattgtttaa aataatattt atggttttaa taccattttc ataagctgtc
    24481 atcagttctt gaatattcat taaaacagaa ccatcaccca caaaatttat aacaacttct
    24541 tctcctaccg caagctttgc acccaaagca gcaggtaaag aataccccat cgttccttgt
    24601 ccgccactgg ttgcaagctg tcttgggtaa ttaaaaggat aaaattgtgc aacccacatt
    24661 tgatgttgtc ctacatcagt gattatcctt gcatctggag caagttttgc acattcttgt
    24721 attacccatt gaggttttaa aacctcatcg ctatcttcat aagctaaagg ataaagctca
    24781 tcataacgct taagagtttg cctccactca tggatatttg acttaaattg attttttttc
    24841 aattcttcca aaagctcttt aacaacttct ttaatatctc caactatagg aaaatgcgca
    24901 ttgataatct tagaaataga acttggatct atatcaatat gcactatttt agaatgcttg
    24961 gcaaattcac ttgttttacc tgtaatccta tcatcaaaac gcgcgcctat tgctaccaat
    25021 aaatcacatt cactcaaagc catattagct gtataacttc catgcattcc tgccatttta
    25081 agatttagct catcatcact tcttaaagtt ccaagagcca ttaaggtttc aacggctgga
    25141 atttgagtaa tcttaacaag ttctctgatc tcattagccg catttgatgc tatacatccg
    25201 cctccaaggt aaaaaagagg acgcttagct tcttctaaat tttcagccaa ttttttaatt
    25261 tgttttgaat ttcctttata aataggctta taagttttca ttgaaatttc ttttggataa
    25321 tcccaaatac caagggctgc acttacatct tttggtacat caatatgcac aggacctttt
    25381 cttccacttt ttgctatgta aaaagcctct tttaatattc ttggaaattc ttctatgcaa
    25441 gtgactaaat aattatgttt tacacagggg cgagaaattc ctaccgcatc aatttcttga
    25501 aaagcatcgg tgcctattaa tgaatttgca acttgacctg aaatcaaaac caaaggtata
    25561 gaatcactat aagctgtcgc aagtcctgtg atggtattag taaaaccagg tccacttgta
    25621 acaacagcta cacccacttc accgctcatt cttgcataag catcggctgc atgtacagca
    25681 gcttgctcat gacgcactaa aatatgctta aaatactttt gcaaataaat ttcatcataa
    25741 atatttaagg ctgctccacc aggataacca aaaactatct taacattctc ttcttttaaa
    25801 gcttcgcaaa tcattgccga accgcttatt tttctcataa ggcctccttt gaaaatcaaa
    25861 ttataacaat aattcaatct tttatttaga taaaatataa aaaagtttga aaattttaat
    25921 ttaaaagctc tctaagtgtt acatttaatc tttttccatc cacccttgct ccaaatttag
    25981 cctttgcttc tttcatcacc aaaccttgat cttttaaaga actaacccct aaatttgcaa
    26041 tcatttcttt taaagctgct tgcaattcct catcgcttaa ttgctgaggt aaataacttt
    26101 caaaaagtgc tatttctttt tgttcttttt gtgccaaatc ctctcttcca cctttagaat
    26161 aaagctcgat agcatctttg cgctttttaa tctcgcttgc gataattttt aaaattcttt
    26221 catcacttag ctctattctt tcatctactt cgacctgttt aaacgcggca tttagcgttc
    26281 ttaaagtatc gcgtttaaaa tcatcttttt gcctcatcgc ttctttgata tcatttaata
    26341 tctgctcttt taaattcatt gtatatcctt ttattttagt taaaattaca aattttaaga
    26401 tttaaaccaa agccttttaa gcctatataa tccttatcac aactttgcga cataagctta
    26461 atctcttcta tgccaaaata tcttaaaatt tgcgcaccta taccataatt tttaaattga
    26521 gttacacttg atttttcacc ctgcataaaa actatcactc ctccattttc actcaaaaaa
    26581 cgaatttgat ctaataattt agaaaattta tcagaggtta aaagctcaaa atcacttccg
    26641 ctaatatgaa atttaacatt ttcacatttt tgaatttctt taaatgcaaa tgctatatgc
    26701 tgagcattat tatgatctgt aaaaatgaat ttttgtgctt taaaacctgc taaaatagca
    26761 tcactttttt cttgtaattt aataagactt tcatttttta agcgatattc tatgatatca
    26821 gaaacagcta tcatgtttag attatgctta gtacaaaatt cttccaaatc acttcttctt
    26881 gccatatctc catcatcttt aacaatctca caaatcacgc aagcttgttt aagccctgct
    26941 aaatgacaaa gatcaaccgt tccttctgta tggcctgtgc gctctaaaac accgcctttt
    27001 ttggctatca aaggatttat atgtccaggg cgtacaaaat cactcgcttt tgcattatcg
    27061 tctgcaaaaa tttttatcgt catatctctt tcataagcac ttacacctgt agttgcatct
    27121 tttgcatcca ctgtgattgt aaaggctgtt tcatgatttg aagtattttt gggcaccatc
    27181 aaaggaagtt caaattttct tgcaagttct tctgcgagtg ctacacacac aacccctcta
    27241 gcttctttta tcataaaatt tactttttct ttagtgctaa attgagctgg aaaaatcaaa
    27301 tctccttcat tttctctatc ttctgcatct accattacaa gcatttttcc ttcttgtaaa
    27361 tccttaattg cttgttcaat gcttacaaac ttcatttata atccttaaaa tattattttt
    27421 tttaaaatta taacttcatt tgcttgacaa ataaattaaa attgattata atctcgtttt
    27481 tactttttaa aaattaaata ttggggtatc gccaagcggt aaggcaacag gttttggtcc
    27541 tgtcattcag gggttcgaat ccctttaccc catccacgaa ctaaacttca aacacaaatt
    27601 tgattgtcgc gaagtagagc agtggttagc tcgtcgggct cataacccga aggtcgggag
    27661 ttcaaatctc cccttcgcaa ccaaaactta tccataactt taaatcttaa atatacaaaa
    27721 atgatttatt ttaattttct agaattttat tttttaacta aaaaaatcgc attataaaat
    27781 aatat
//
LOCUS       DAQUWA010000014        27044 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.014, whole genome shotgun sequence.
ACCESSION   DAQUWA010000014 DAQUWA010000000
VERSION     DAQUWA010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 27044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27044
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.014"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            1..945
                     /locus_tag="R8X70_000542"
     CDS             1..945
                     /locus_tag="R8X70_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011050018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEF2928349.1"
                     /translation="MNLKGIGISFTPRYFFQTKLHKIFNEILKYNAKELEEIRTRVKY
                     YNQINDFFTLTEREKIGKFPFKNTSYAFDAYEISKYFNDDFLWKKEFGDVKYTFKEPA
                     ICKSRPLENNTNNILLKLDKNRHFCFLKDNIKYENKKDIAIFRGAVYQKHRKEFFHSY
                     FGKSFCDIGDTSKQLSQWKKNFLNKKEQMKYKFIISLEGNDVASNLKWAMNSNSLVLA
                     PKITCETWFMEGTLKPNYHFALIDNDNLATVIEHFISHPKDALEIINNAHQYVKKFLD
                     KKKEFYIGILVLTKYFYYSGQLDLNKDECEREILELIK"
     gene            1054..1129
                     /locus_tag="R8X70_000543"
     tRNA            1054..1129
                     /locus_tag="R8X70_000543"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1087..1089,aa:Ala,seq:ggc)
     gene            1131..1206
                     /locus_tag="R8X70_000544"
     tRNA            1131..1206
                     /locus_tag="R8X70_000544"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1164..1166,aa:Val,seq:gac)
     gene            1447..1977
                     /locus_tag="R8X70_000545"
     CDS             1447..1977
                     /locus_tag="R8X70_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEF2928350.1"
                     /translation="MQNFVIEKATQKDLNSILNITKDALNSMKAMNFNQWNEHYPNEE
                     IFKEDIKAQELYLYKEKDEILGFICINEKFEPEFYEQINFKKSYNNLAFYLHRLAVKE
                     NAKGKGVAQKLLNFCETYAKNEGKYSLRADTHSKNIPMNSLFKKLNFEFCGAFHIPCY
                     EDEFFAYEKILNQKAF"
     gene            complement(1957..2559)
                     /gene="leuD"
                     /locus_tag="R8X70_000546"
     CDS             complement(1957..2559)
                     /gene="leuD"
                     /locus_tag="R8X70_000546"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEF2928351.1"
                     /translation="MQKFTTHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELAKDEVASIIKQLKESEDKNIEISLFEKKVFFKDQVFS
                     FDLDEFRRTCLLEGLDNIALTLKYEEQIKAYEKNSKSFLV"
     gene            complement(2561..3973)
                     /gene="leuC"
                     /locus_tag="R8X70_000547"
     CDS             complement(2561..3973)
                     /gene="leuC"
                     /locus_tag="R8X70_000547"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEF2928352.1"
                     /translation="MTMAKTLYEKVFDSHVVYQKENELPILYIDRHLIHEVTSPQAFS
                     GLKMANRKMARSDLTLATIDHDVSTKSTDLDACSGMAKEQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVSPELGFTLPGVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYAKDLILYLISKYGTAKGTGYAIEFCGELIEGLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKGKEFAPKGEEFEKHCEYWRSLKSDEGAQYD
                     ESIVLDASQIQPQISYGTNPSQVIAINERIPKVSDFINPSDQKSLLDALDYVNLEQDQ
                     SLEGVKIDIVFIGSCTNGRLEDLKIAADILKGRKIHKDVKALIVPGSMQVRKEAENLG
                     LDKIFIEAGCEWRYAGCSMCLGMNDDKASAGQRVASTSNRNFVGRQGKGSITHLMSPA
                     SAAACAIEGVICDNRKYLGV"
     gene            complement(3960..5036)
                     /gene="leuB"
                     /locus_tag="R8X70_000548"
     CDS             complement(3960..5036)
                     /gene="leuB"
                     /locus_tag="R8X70_000548"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEF2928353.1"
                     /translation="MNTYKIAVLPGDGIGPSVMKEALKILNFVAQKHGFKLETKEAKI
                     GGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYESLRHASPLKDEIIQKGVDILCVRELTGGIYFGKQELGKESAYDTEI
                     YTKAEIERITRLAFESARIRNKKVHLIDKANVLASSILWRDVVGQIAKEYEDIKLEYM
                     YVDNAAMQIIKNPSTFDVMLCSNLFGDILSDELAAISGSLGLLCSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEKAARDIENAIAIALERGKMTKDLN
                     ANSYLSTDEMGDCIVEILKENNNG"
     gene            complement(5033..6568)
                     /gene="leuA"
                     /locus_tag="R8X70_000549"
     CDS             complement(5033..6568)
                     /gene="leuA"
                     /locus_tag="R8X70_000549"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEF2928354.1"
                     /translation="MKNNKIIIFDTTLRDGEQALGSSLNINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFEAVKNIASKVKNSTICALSRALDKDIDTAYEALKVADSFRIHTFIA
                     TSTLHMQDKLKKDFDEILAMAQRAIARARNYTDDVEFSCEDAGRTPIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSA
                     ILQGARQIECTMNGLGERAGNCALEEVVMAIKTRSDYLKGFYTDIKCENISKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQTYEIISPSSIGLHENRMLMTARS
                     GRAMIKTCLDNLGYDEKTYNLDEVYESFLRLADKKGQVYDYDLEALMFLSYENDEENE
                     LVLEKLSVISGTIPTACVCVRIKEELKTEACTGNGPIEAVFNCISRITGLNPVLKAYS
                     INAKSSGVDAQGQVDVDLEFKGRKFHGKGLSTDVIEASAQAFISAYNAIYRSLKVEER
                     KAV"
     gene            6913..7542
                     /locus_tag="R8X70_000550"
     CDS             6913..7542
                     /locus_tag="R8X70_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928355.1"
                     /translation="MLKELLEIKKEMEPVIHEANVKLNVLAREVIVRRKEYEIYGPMV
                     DRVYLDNAIYVKVMASGRDVKTDNVPIKTGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIISKTQATLSKASKMNVLIKTNLGEASAALKFNITIEYTKEN
                     QKLTRENTKSAGSFRDTRTYINLVVDKNTDSQICEKLLDDVERYFIGGG"
     gene            complement(7566..8210)
                     /locus_tag="R8X70_000551"
     CDS             complement(7566..8210)
                     /locus_tag="R8X70_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEF2928356.1"
                     /translation="MNKKFLSVIVGIALFSSSALAAEESGFFIGADAAYVQTKVKGDL
                     KHNKTGAVFNGDLSSSIPILGLRMGYRFNDLHRLYAAYNYSDEFSDIIRTPNLRIEGD
                     FNTHKFLLGYDFTPEIFKRVRAVAGGYLGYAKTSIDLKTSLLSLSQDFDGFVYGAKIG
                     AIFELGASNEIEVGFKAEQIEYNTRNYYQETIGSNFYDPRQTNYGLYLGYTYKF"
     gene            complement(8623..8949)
                     /locus_tag="R8X70_000552"
     CDS             complement(8623..8949)
                     /locus_tag="R8X70_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HEF2928357.1"
                     /translation="MKTKIIPAILACSAILASANMVPASTQTPAVAPAPLHPYPAYPQ
                     QAMPPQDYFNGLPKNINSQIQNLHPGAFIVDVDWEEYGYEVKLNNFMELYFDRNGNFL
                     GQKFDD"
     gene            complement(9136..9519)
                     /gene="queF"
                     /locus_tag="R8X70_000553"
     CDS             complement(9136..9519)
                     /gene="queF"
                     /locus_tag="R8X70_000553"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEF2928358.1"
                     /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYIPDQFVVELKAIKLYINTFMHRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPK"
     gene            9680..10279
                     /locus_tag="R8X70_000554"
     CDS             9680..10279
                     /locus_tag="R8X70_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEF2928359.1"
                     /translation="MRKSIAIIGGSIAGLSAALFFASAKNEELDFDITVFDEGKADLK
                     AAAIYNVPFFPKGAKADEIYTHIKAQIASMLEVKYIDSKVVSISGEKGDFTVNDEQGL
                     GIKADYIIVATGANKSDIKELEDFVIPHELMPKPNKFCFKHHGRQIIKEGIYAAGLAS
                     GVTTMVACAMGSANEAACAILSDIKGAVSVYHDTPTTRN"
     gene            complement(10284..11165)
                     /gene="metA"
                     /locus_tag="R8X70_000555"
     CDS             complement(10284..11165)
                     /gene="metA"
                     /locus_tag="R8X70_000555"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HEF2928360.1"
                     /translation="MPLIIPENIPAYELLKEHAFIMGSRRAKHQDIRPQEILIINLMP
                     KKIETENQILSLLANSPLQVNITLLATTSYVGKNTPFTHLEKFYKGLDEVKKRKFDGA
                     IVTGAPVEQMDFEKVAYWKELLEIFDFLQQNVTSSMYICWGAMAALKHFHGVDKIALD
                     KKIFGIYKHDKISPDLLLTNLDEKVLMPHSRHSSMDEEQILALQKQGKLKVLLRNKKI
                     GSALLRDEKNIFILGHLEYFKDTLHQEYVRDNFIQKAKNYYDKKGNIKYNWRSNANTI
                     FANWLNYDVYQSTPFVL"
     gene            complement(11176..11397)
                     /locus_tag="R8X70_000556"
     CDS             complement(11176..11397)
                     /locus_tag="R8X70_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEF2928361.1"
                     /translation="MVTLDTRGKVCPFPLVEAKNLVQTLKSGEELEILFDCTQATETI
                     PQWAAEEGHEIVDFELLGDAEWRIKLIKK"
     gene            complement(11407..12441)
                     /locus_tag="R8X70_000557"
     CDS             complement(11407..12441)
                     /locus_tag="R8X70_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEF2928362.1"
                     /translation="MLSGIIVGLLLGFVLQRGRFCVVGAYRDVFLSKKFTIFIALFIV
                     VALQSIGVWALHSLGYISIKPQEFYWLSTIIGGIIFGFGMVIAGGCATGTWYRAGEGL
                     IGSIAALLFYAFSASAVKYGVLLPLQDNLNTFKISDGTFYQSLGISPWILVLALSLIV
                     GFFVIRELRKPRLKVARLKPRKQGISHILFEKSWHPFVTAVLVALIAILAWPLSSLSG
                     RNYGLGITTPSANLVQYLSTGDVQFVDWGVFLVLGIALGSFLGAKLSGEFRFRLPDKK
                     TLAYASIGGILMGVGASLAGGCTIGNGLVETSLFSYKGWVATVFFLIGAYIATFYTII
                     LPTRKATQKI"
     gene            complement(12453..13724)
                     /locus_tag="R8X70_000558"
     CDS             complement(12453..13724)
                     /locus_tag="R8X70_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HEF2928363.1"
                     /translation="MNFNKETLALHGAYNFDTQRSISVPIYQNTAYNFENLDQAAARF
                     NLQELGNIYSRIGNPTSDVLGQRLANVEGGAFGIPVSSGMAACFYALANLASSGDNVA
                     YSNKIYGGTQTLISHTLKNFGIEAREFDIDDLDSLEKVIDQNTKAIFFESLSNPQIAI
                     ADIEKITQIAKKHKIATICDNTVATPFLLQPFKHGVDIIVHSLSKYVSGQGSALGGAL
                     IERKDLNDLLKNNDRYKTFNTPDPSYHGLNLNTLDLPIFSIRIIITWLRDLGASLAPQ
                     NAWLLLQGLETLAVRIEKHSQNAEKVANFLNSHPDIKGVNYPTLASNAYHNLFKKYFD
                     KNFASGLLSFEARDYEHARRICDKTQLFLLAANLGDSKSLIIHPASTTHSQLSEEELQ
                     KAGIKKTTVRLSIGLENSDDLIADLKQAIES"
     gene            complement(14150..16696)
                     /gene="flgE"
                     /locus_tag="R8X70_000559"
     CDS             complement(14150..16696)
                     /gene="flgE"
                     /locus_tag="R8X70_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HEF2928364.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFF
                     MVSDDGGLTRYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFID
                     PGMHIPAAKSTEVAIKANLNSGLNIGNAARPLYALDSVHGFNKKTGETKDENDNGITQ
                     FYTTSKNSMEVTEKGVDAGSLFNGSGQGLNLREGQGIWMSFADSKFTTNGLNITGFDA
                     NNKANQQNVVFWGSENQKTRLDITLNGVAIQNADITSLDQAIAYINTFTNPQEGREGT
                     GIVASKNANGTGIIFTNRNENGTTDNMKNINLVVNQANSAGELWNATWQQGQNNFTFA
                     EVNPNQNVSTWTATGGGGNLPNITGPTNAAVITAHKYTYSSSPQNIPPMYNPDGGPAF
                     NDNDNNPATKPTDPASGNYWDALRGSLYNTDVRVFRTTEDLRELLQRDARYGVDYNGN
                     GAFAAEDINQKVTITVSDDGRFTVSNAKQDSQIPANALQAQAQTTTAKDLSFNVTAYT
                     DALGKVSTNDAFTKIFKAFDGVQTAGSQKKESEQLKLSAFSAGLEIYDSLGSKHTLEV
                     QFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPNNIVVGTARFNNDGSLASYNPKTL
                     NFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDD
                     KGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRG
                     EMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ"
     gene            complement(16877..17353)
                     /gene="ruvC"
                     /locus_tag="R8X70_000560"
     CDS             complement(16877..17353)
                     /gene="ruvC"
                     /locus_tag="R8X70_000560"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEF2928365.1"
                     /translation="MKILGIDPGSRNCGYAIIEANKGKNTLIEAGLIKIKPSTLQYQI
                     TELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAEYT
                     PLQVKKAVTGKAKATKEQVAFMVKRFLGLSKDIKPLDITDAIAVALTHAANLRVRV"
     gene            17456..18778
                     /gene="dnaA"
                     /locus_tag="R8X70_000561"
     CDS             17456..18778
                     /gene="dnaA"
                     /locus_tag="R8X70_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEF2928366.1"
                     /translation="MNPNQILENLKKELSENEYENYIAILKFNEKQSKADFLVFNAPN
                     ELLAKFIQTKYGKKISHFYEVQSGNKASVLIQAQSQKHSSKSTKIDIAHIKAQSTILN
                     PSFTFESFVVGDSNKYAYGACKAISQKDKLGKLYNPIFIYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYANILGQEITLELAKSVMKD
                     HIKEKKENISIEDILSLICKEFNIKPSDVKSSKKTQNVVTARRIAIYLARELTSLTFS
                     QLANFFVMKDHTAISHSVKKIKELMEDDEQIKTKIEELKNKILTKSQS"
     gene            18943..20010
                     /locus_tag="R8X70_000562"
     CDS             18943..20010
                     /locus_tag="R8X70_000562"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEF2928367.1"
                     /translation="MKLSINKNTLESAVLLCNAYVEKKDSSTITSHLLFEADEDKLII
                     RASDFEIGINYKIRKIRVESGGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPKTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDRINFVGTDTRRLAVYTLEKANNQEFHISIPKKAIMEMQKLFYEKIEIYYDENML
                     IAKNDNFEFFTKLINDKFPDYEKVIPKTFKQELKFSTEDFIDSLKKISVVTEKMKLHF
                     NKDKIIFEGISLDNMEAKTELEIETGVSEEFNLNIKIKYLLDFLTSIEEEQFTLSVNE
                     PNLAFVVNSQGLSMVIMPMIL"
     gene            20042..22354
                     /gene="gyrB"
                     /locus_tag="R8X70_000563"
     CDS             20042..22354
                     /gene="gyrB"
                     /locus_tag="R8X70_000563"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEF2928368.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDIEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSK
                     KTGTTIEFWPDDTIFEVTEFDYDILAKRFRELAYLNPKITINFKDNRVGKSESFHFEG
                     GISQFVSDLNKKEALTKPIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKG
                     KLGSSYVRPIVSKASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVANGHIYLAQPPLYRYKKGQKKEIYLKDEKALNDYLIETGIESSNYEGIG
                     LNDLKDFLKIVAAYRSVLNELKKRFNVISVIRYLIENPDFIKENNEELFKIVKAFLEK
                     EGHNILNHYINENEIRIYVQTENGLEELIINDDLFSHPLYEEANYIFNKIKDRDLSFE
                     KDILDILDEVEKNAKKGAYIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAN
                     DTFNLFMGDEVEPRRDYIQTHAKDVKHLDV"
     gene            22517..22921
                     /locus_tag="R8X70_000564"
     CDS             22517..22921
                     /locus_tag="R8X70_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEF2928369.1"
                     /translation="MLEVSRRNFLKATALSAVCLSGLNASFLEFSQAKQVKYFIKDSE
                     IPHQGNFINADEILLIEKDISNIYSQLKEAFENKALIGSVSSGTTFFVIRTMAADYGM
                     RVAYEKNKVIFILGFWHQKELNYNFTKKCFAK"
     gene            22890..24484
                     /locus_tag="R8X70_000565"
                     /pseudo
     CDS             22890..24484
                     /locus_tag="R8X70_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655472.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
     gene            24481..24870
                     /locus_tag="R8X70_000566"
     CDS             24481..24870
                     /locus_tag="R8X70_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEF2928370.1"
                     /translation="MKKIALFFVLFVCLLNLNAKDKEWLPKGESISVYEYIPNNPRSP
                     AAFSSVDSKKLNANQRKGQQVYSKWCIACHGEGMPALLEDRTDLSPDLVTIFVRYGKH
                     SMPFFRKTEISDKELQYLGEYLGRNYK"
     gene            complement(24989..26635)
                     /locus_tag="R8X70_000567"
     CDS             complement(24989..26635)
                     /locus_tag="R8X70_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HEF2928371.1"
                     /translation="MKVFIFLSLIFNLALSAGFDLGEVHQKPINITAVGMFLVFVLAT
                     LFITYYSNKKSKSKSGFYTAGGNITGMQNGVAIAGDYMSAASFLGITALVFTNGFDGL
                     IYSIGFLVGWPIILFLIAEKFRNLGKFTFADITAYRLEAKPIRVISAISALSVIIFYL
                     IAQMVGAGQLIQLLFGLPYTFAVVLVGILMICYVTFGGMHATTWVQIIKAILLLAGAT
                     FMAVMILYLTKFDLKYYFDLAISHHPKGENIMKPGTFLPDTVSALSLGLALMFGTAGL
                     PHILMRFFTVKDAKEARKSVFYATGFIGYFYILTFIIGFGAIALLLGNPQFTNADGSF
                     NGASNMIAVTLADVLGGDVFLGFISAVAFATILAVVAGLAISGAGAISHDLYVNVIKK
                     GDVKHEDEMRVTKIATIAIGIFAILLGIVFEKQNVAFTVGLAFAIAASVNFPILLLCI
                     YWKNLTTKGAFWGGLIGLIVVLALVILSPSIWVKSFGFSEAIFPYDHPALFSMPLSFI
                     LIYIISKLDNSKRAKKDKEGFEAQDFRAQSGVGVSEAVAH"
     gene            complement(26632..26991)
                     /locus_tag="R8X70_000568"
     CDS             complement(26632..26991)
                     /locus_tag="R8X70_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HEF2928372.1"
                     /translation="MNLNAEQKNAVLRFKKFVSFRNKISLNLSLIVLICYYIFVLGIG
                     LMPEILGYKLGPSSITLGIMVGIGLILLCIISTGIYTFIANYFLDKEQEEVIKNLENE
                     GLLDALKDGKINYKELV"
BASE COUNT         9386 a         4591 c         4256 g         8811 t
ORIGIN      
        1 atgaatttaa aaggcatcgg aatatctttt acaccaagat atttttttca aacaaaattg
       61 cataaaattt tcaatgaaat tttaaaatat aatgctaaag agctagaaga aatacgaact
      121 cgggttaagt attacaatca aataaatgat ttttttacat taacagaaag agaaaaaata
      181 ggaaaatttc cttttaaaaa tacttcttat gcttttgatg cttatgaaat tagtaaatac
      241 tttaatgatg attttttatg gaaaaaagaa tttggtgatg taaaatatac ttttaaagag
      301 ccggccattt gtaaatcaag acctttagaa aataatacaa acaacatttt attaaaactt
      361 gataaaaata ggcatttttg ttttttaaaa gacaatataa aatatgaaaa taaaaaagat
      421 atagcaattt ttagaggtgc tgtatatcaa aaacatagaa aagaattttt tcattcttat
      481 tttggtaaat cattttgtga tataggagat acttcaaagc aattgagtca atggaaaaaa
      541 aactttttaa acaaaaaaga acaaatgaaa tataaattta taatttcttt agagggtaac
      601 gatgtagcaa gcaacttaaa atgggctatg aattctaatt ctttagtttt agctccaaaa
      661 ataacttgcg aaacttggtt catggaagga actttaaaac caaattacca ttttgcttta
      721 attgataatg ataacttagc tacagtaatc gaacatttta tcagtcatcc aaaagatgcg
      781 ctagaaatca ttaataacgc tcatcagtat gttaagaaat tcttagataa gaaaaaagaa
      841 ttttatatag ggattttagt tttgactaaa tatttttact attctgggca actcgatctt
      901 aacaaagatg aatgcgaaag agaaatttta gaattaatca aataatttaa aattctttta
      961 tattttattt ttataacttt taataagaat tttaaattta gttttcagcc aaaaaaaagt
     1021 aatattgcgc taaaattttt tagaaaattc taaggggcat tagctcagct gggagagcac
     1081 aacgctggca gcgttggggt cagcggttcg aacccgctat gctccaccat ggttccgtag
     1141 ctcagttggt agagcactac cttgacatgg tagtggccgt tggttcaagt ccaatcggag
     1201 ccaccatttt tcatttcttt caatttcttt caatttcttc aactttcaaa aaatacctta
     1261 aaagcactat atataaacaa actaaaggat ttttgatttc aatttattgc ttttgtgtta
     1321 taatgatttt caattaatta aagttctttt tggggctttt aaaactcaat agggtttttt
     1381 gaagaaataa aacttacaaa aaatattaaa gttaaacact agtatttaca ttacaaaagg
     1441 atttttatgc aaaattttgt catagaaaaa gctacacaaa aagatttaaa ttccatactt
     1501 aacataacaa aagacgctct aaattccatg aaagctatga attttaatca atggaatgaa
     1561 cattacccta atgaagaaat ttttaaagaa gatatcaaag cacaagagct ttatctttat
     1621 aaagaaaagg atgagattct aggctttatt tgcatcaatg aaaaattcga acccgaattt
     1681 tacgagcaaa tcaactttaa aaaatcctac aataatctag ctttttatct gcaccgtttg
     1741 gctgtaaaag aaaatgctaa aggcaaaggc gtggcgcaaa agctgttaaa tttttgtgaa
     1801 acttatgcta aaaatgaagg aaaatatagc ttaagagcgg atactcatag taaaaatatc
     1861 cctatgaatt cgctctttaa aaaattaaat tttgagtttt gtggggcttt tcatatccct
     1921 tgctatgaag atgaattttt cgcttatgaa aaaatcctaa accaaaaagc tttttgagtt
     1981 tttctcataa gccttgattt gttcttcata ttttaaagtt aaagctatat tatcaagccc
     2041 ttctagtaaa caggttctac gaaattcatc caaatcaaaa gaaaaaactt gatctttaaa
     2101 aaataccttt ttctcaaata aagaaatttc tatattttta tcttcagatt ctttcagttg
     2161 ttttataatg cttgcaacct catctttagc aagctctata gtaagcaaac catttcctaa
     2221 agcattattt ttaaaaatat ctgcaaaaga aggcgcgata atagctctta taccataatc
     2281 caccaaagcc caaggtgcgt gctcccttga agaaccgctt ccaaaatttt caaaacttac
     2341 caaaatagag ctattttgat attctttttt attgagatta aaatccatat ttaaaacact
     2401 ttctttatca tctaaataac gcaaatcatg gaacaaatgc ttgccaaaac cttgcttaga
     2461 cactgcaagt aaaaattgct tagggatgat ttgatctgtg tcgatattgg catattccaa
     2521 aggacaagct atacctttat gagtagtaaa tttttgcatt ttaaactcct aaatattttc
     2581 tattatcaca aataacgcct tctatggcac aggctgctgc gcttgcagga ctcattaagt
     2641 gggtaataga acctttacct tgtctgccta caaaattacg atttgaagtt gaagcaactc
     2701 tttgtcccgc acttgcttta tcatcattca taccaagaca cattgaacac cctgcatatc
     2761 tccactcaca ccctgcttcg ataaaaattt tatcaagtcc taaattttca gcttcttttc
     2821 tcacttgcat agaaccaggc acgattaaag ctttaacatc cttgtgaatt ttacgccctt
     2881 ttaaaatatc cgcagctatc ttaagatctt ctaaacgccc atttgtacaa gaacctatga
     2941 aaacaatatc gatttttacc ccttctaagc tttgatcttg ctccaaattc acataatcta
     3001 aagcatcaag taaagatttt tgatcgcttg gattgataaa atcactgact tttggaattc
     3061 tttcatttat agcaataact tgagaaggat tagttccata gctgatttgc ggttgaattt
     3121 ggcttgcatc aaggactata ctttcatcat attgtgcgcc ctcatcgctt tttaaacttc
     3181 tccaatactc acaatgcttt tcaaattctt ctccctttgg agcaaattct ttccctttta
     3241 tatactcaaa agtaatctca tcaggagcta tcataccgac ttttgctcca aattctatag
     3301 ccatattgca aagtgtcatt ctagcttcca tactcaagcc ttctatcaac tctccacaaa
     3361 attctatagc atagcctgtg ccttttgcgg taccgtattt tgatataaga tataaaatca
     3421 aatccttagc ataaacaccc ttttgaaact gacccttgca ttctattttc atagttttaa
     3481 gttttgcttg ttttaaagtt tgcgtagcca ttacatgctc gacctcgctt gtgcctatac
     3541 caaaagccaa agctccaaag gccccgtgtg ttgcagtgtg agaatcccca caaaccaaag
     3601 ttacacccgg taaagtaaaa ccaagctcgg gacttactat atgcactata ccttgatttt
     3661 tatcgcctag gcctaaaagt ctgactccaa attctttagt attttgcatc aaagtcgtaa
     3721 tttgctcttt tgccatacct gaacaagcat ccaaatctgt gcttttagtc gatacatcat
     3781 gatctatagt tgctaaagtc aaatccgatc ttgccatttt acgatttgcc attttaagac
     3841 ctgaaaaagc ttgagggctt gttacttcgt ggattaaatg tctatcgata taaagtatag
     3901 gaagttcatt ttccttttga taaaccacat gagaatcaaa cactttttca tataaagttt
     3961 tagccattgt tattctcctt taaaatttct actatacaat ctcccatttc atcggtgctt
     4021 aaataagaat tcgcatttaa atccttagtc atttttccac gctctaaagc tatggctata
     4081 gcattttcta tatcccttgc agccttttct tctttaaagc tatattttaa catcaaagca
     4141 gcacttaaaa tttgggctat aggattggct atatttaaat gagctatatc aggagctgaa
     4201 ccacctgctg gctcataaag cccaaaacct ttatcattta aactcgcaga acaaagcaag
     4261 cccaaagatc cacttatagc tgctaattca tcgcttaaaa tatcgccaaa aagattagaa
     4321 caaagcatta catcaaaagt gctaggattt ttaataattt gcatagctgc attatctaca
     4381 tacatgtatt ctagcttgat atcttcgtat tcttttgcaa tttgacctac tacatcacgc
     4441 cataaaatag aacttgctaa aacatttgcc ttatcaatta gatgcacttt tttatttctt
     4501 attcttgcac tttcaaaagc aaggcgtgta atcctttcta tctctgcttt agtgtaaatt
     4561 tcagtatcat aagcactttc tttgcccaat tcttgcttac caaaataaat cccgcctgta
     4621 agctctctaa cgcacaagat atccacacct ttttggataa tttcatcttt taagggcgaa
     4681 gcatgtctta agctttcata aattttacaa ggacgcaaat ttgcaaataa attaaaatgc
     4741 tttcttaaag gtaaaagcga agctctttca ggtctttgat ctataggtag attatcccac
     4801 ttaggtcctc ctactgaacc aaacaaaata gcatcgcttt gctcacaaag ctttaaagtc
     4861 tcatcgctta atgctacccc ataggcatct atacttgccc cacctatctt cgcttctttt
     4921 gtttctaatt taaagccgtg tttttgggcg acaaaattta aaatttttaa agcctctttc
     4981 atcactgaag gccctatgcc atctcctggc aaaactgcta ttttataagt attcatactg
     5041 ctttcctttc ttcaactttt aaagatcgat aaattgcatt gtaagcactg ataaaggctt
     5101 gagctgatgc ttctataaca tctgttgaaa gccctttgcc atgaaatttt ctccctttaa
     5161 attctaaatc cacatccact tgcccttgtg catccacacc tgaacttttt gcattaatgc
     5221 tatatgcttt taaaacaggg tttaagcctg tgattctaga gatgcaatta aataccgctt
     5281 ctatgggccc atttccggta caagcttcag tttttaattc ttcttttata cgcacacaaa
     5341 cacaagctgt tgggatagtg ccgctgatta cgcttaattt ttcaagtact aattcatttt
     5401 cttcatcatt ttcataactt aaaaacatta aagcctctaa gtcataatca taaacctgtc
     5461 cttttttatc cgcaaggcgt aaaaaactct cataaacttc atctaaatta taagtttttt
     5521 catcatatcc taaattatca agacaagttt taatcatagc cctaccgctt cttgcagtca
     5581 taagcatacg attttcatga agtcctatgc tgctagggct tataatttca taagtttgtc
     5641 tatttttaag tactccatct tgatgaattc cagaactatg agaaaaggcg ttacttccta
     5701 ctatggcttt atgtgaaggt atgctttcat tagtgatagc tgaaactaat tttgaagttt
     5761 tagaaatatt ttcacacttg atatctgtat aaaaaccttt taaataatcg cttcttgttt
     5821 ttatcgccat tacaacttct tccaaagcgc aatttccagc cctttcacca agcccattca
     5881 tagtacattc tatctgtctt gcgccttgta aaatagcact taagctattg cctgttgcca
     5941 tacctaagtc attgtgacaa tgcacagaaa tgatagcttt gtctatattt ggcactttgt
     6001 taaataaaat tttgatgata ttagcaaatt cacttggcaa ggtatagcct acggtatctg
     6061 ggatatttat agttttagcg cctgctttta tcgcattttc caccataaaa caaagattat
     6121 ctatcggagt tcttcctgca tcttcgcatg aaaattccac atcatcagta tagtttctag
     6181 ctcttgcaat cgctctttgt gccatagcta aaatttcatc aaaatctttt tttaatttat
     6241 cttgcatatg caaagtcgaa gtggctataa aagtatgaat tctaaaagaa tccgccactt
     6301 ttaaagcctc ataagcggta tctatatctt tatccaaagc tctagaaagc gcacaaatgg
     6361 ttgaattttt tacttttgag gctatatttt ttaccgcttc aaaatctcct tgtgaagata
     6421 caggaaaacc cgcttctatc acatcaacac ctaaattttc aagcgctaag gcaatctgta
     6481 atttttgatt tatatttaaa gaactgccta aggcttgttc accatcgcgt aaagttgtat
     6541 caaaaatgat aattttatta ttcttcatat tttaatcctt aaaaaacgag ataaaccgaa
     6601 tgaattttat taaaaattca aaaacttaaa aacaatagta aaataaaaaa ttttagaaat
     6661 gattaaaaaa ataaaaattt tagtttagag tgagtgagag ttgcagcatc aggttaaagt
     6721 gattttcttt atttttttgc tctttgactt gaattgaatt tgaattttta aaaacctgtg
     6781 tcattgtcgc ctccttcata aaattatata gttttgaatt tagcatattt ttagttaata
     6841 cacaaaataa aaatttacaa attaagaaat ttattgttat aattgtaatt ttaagtaaca
     6901 aaaaggatgt tgatgttaaa agagctttta gaaatcaaaa aagaaatgga gcctgttatc
     6961 catgaagcta atgtaaaatt aaatgtattg gctcgtgaag taatagttcg tagaaaagag
     7021 tatgaaattt acggacctat ggtagatcgt gtctatcttg ataatgcaat ttatgttaaa
     7081 gttatggcaa gtgggcgcga tgtcaaaact gataatgtcc caatcaaaac aggtttttac
     7141 atggtttttg ttgctcctga aaaagaaagt acaaaagaca tcaaaaataa acttaaagta
     7201 gcttatgaag gacttgataa taaatttata gcaacactca tccgctcttg ccaaagattt
     7261 aaagaaatca tatctaaaac ccaagctacc ctctctaaag cttcaaaaat gaatgtttta
     7321 ataaaaacca atctaggaga agcaagcgcg gctcttaaat ttaacatcac catagaatac
     7381 accaaagaaa accaaaaatt aacacgcgaa aatacaaaat cggcaggaag ttttagagat
     7441 actagaactt atatcaatct tgtagtagat aaaaatactg attctcaaat ttgtgaaaaa
     7501 ttgctagatg atgtagaaag atattttatc ggtgggggtt gaaatcctac cgataaaata
     7561 cttcattaga atttgtaagt ataacctaaa tataaaccat aatttgtttg tcttggatca
     7621 taaaaattcg accctatagt ttcttggtaa taatttctag tattgtattc gatttgttct
     7681 gctttaaaac ctacttcgat ttcattagaa gcacctaatt caaatatagc acctattttt
     7741 gctccgtaaa caaaaccatc aaaatcttga gataaagata ataaagatgt ttttaaatca
     7801 atacttgttt ttgcatagcc taaatatcca cccgcaacag ctcttactct tttaaaaatt
     7861 tctggagtaa aatcatagcc tagcaagaat ttatgtgtgt taaaatcacc ctctattcta
     7921 agattaggag ttcttataat atcactaaat tcatcagaat aattataagc agcatacaat
     7981 ctatgtaaat cattaaaacg ataacccatt cttaaaccta aaataggaat gctactagat
     8041 aaatcaccat taaaaacagc accggtttta ttatgtttta aatccccttt aactttagtt
     8101 tgaacataag ctgcatccgc acctataaaa aaacctgatt cttccgcagc taaagctgaa
     8161 cttgaaaata gcgcaatacc cacaattaca cttaaaaact ttttattcat aatttttcct
     8221 ttaaattggt tttgtaaaac gcattatatt atattatatt gataattaat atagtattat
     8281 ttttgttact tttttaattt ttttctaaga tatgtaagta ttctatggtt tgagattgtt
     8341 tgcaaattcg agaagaatcg gccttaaaac gcttataaat ttgacttttt aaatcatatt
     8401 tccatatttt taaagatttg tttttcaagg aaagcaagct caacataaat cacttaacat
     8461 ctaaaaatat tagacttttt gcctcaacga tagacaacta atatcaaaat atataactta
     8521 tatttaaaaa aatgtgcaat tataatataa atttatctaa aaaagaataa aaaacacaaa
     8581 gagtaaattt actctttgta aaaaagtttc aatcaaaagt gattaatcat caaatttttg
     8641 tcccaaaaaa ttgccattgc gatcaaaata aagctccata aaattattga gcttaacctc
     8701 ataaccatac tcttcccaat ccacatcaac aataaaagca cctggatgta gattttgaat
     8761 ttggctgttg atattttttg gtaagccatt aaaataatct tgtggtggca tagcttgttg
     8821 tgggtatgca ggatatggat gaagtggggc aggtgcgact gcaggagttt gagtcgaagc
     8881 agggaccatg ttcgcacttg caagaattgc agagcatgct agaatagcag ggataatttt
     8941 tgttttcatt atctaactcc ttaaaatgtt ttaacaagtg taagtttatg ttttttgtgt
     9001 gaagcgagcg tgaaagataa gataaaaaat atttagaaaa tagctctata aatttagaat
     9061 attgaaaaaa ttttgaagct tttgcacttt aaagctattt tttataaagc tttacatgaa
     9121 tgcaaaagct ttatttcatt ttggcactac catatcactg cgacattcta tcactgtgtg
     9181 cacatttccg cgtggattaa aatcccctac caccttaatc cattttggct tgagcttatc
     9241 ttttaaggta ttataaattt cattgatgct tgcttcatgt gaaacatttc tatgcataaa
     9301 agtattgata taaagtttta tcgctttaag ttcaaccaca aattgatcag gtatatactc
     9361 aagataaatc gtcgcaaaat caggataacc cgaacgcgga caacaacaca taaattcagg
     9421 taaagtgatt tttataatat aatcattctt cgcatcatta ggccaaattt ccatattttc
     9481 tacatcaaat tctttaattt ctttttcacc ataacgcatg agctttcctt attgaaaaat
     9541 ttttagaaaa ttatataaaa aattactttt agagcaattg aaaaataaac atttttaaca
     9601 aattgtataa aaaagatcga tattagatta aataaagctt tttatactag aataagacaa
     9661 atttttaaaa aggaaaaaaa tgagaaaatc aattgcaatt ataggcggta gcatcgcagg
     9721 acttagcgcg gctttatttt tcgcttcagc taaaaatgaa gaacttgact ttgatatcac
     9781 tgtttttgat gagggtaaag cagatttaaa agcagcagca atttacaatg ttcctttttt
     9841 cccaaaaggt gcaaaagcag atgaaattta cactcatata aaagcacaaa ttgcttctat
     9901 gctcgaagta aaatacatcg attcaaaagt agtaagcata agcggagaaa aaggagattt
     9961 tactgttaat gatgagcaag gcttgggtat aaaagcagat tatatcatcg tagcaacagg
    10021 ggcaaacaaa agcgatatca aagaacttga agattttgta ataccgcatg agcttatgcc
    10081 aaaaccaaac aaattttgtt tcaaacatca cgggagacag attatcaaag aaggaattta
    10141 cgcagcagga cttgcttcag gtgttacgac tatggtagct tgcgcgatgg gaagtgccaa
    10201 tgaagcagct tgcgcaattt taagcgatat caaaggtgca gtaagcgtat atcacgatac
    10261 ccctactaca agaaattaaa tcatcaaagc acaaaaggtg tgctttgata cacatcataa
    10321 ttgagccaat ttgcaaagat ggtgttcgca tttgaacgcc aattgtattt tatattgccc
    10381 tttttatcgt aataattttt agctttttgt atgaaattat ctcttacata ttcttggtgt
    10441 aaagtatctt taaaatactc taaatggcct aaaataaaaa tattcttttc atctcttaac
    10501 aaagccgagc caattttttt atttctaagc aaaactttca atttcccttg tttttgtagt
    10561 gctaaaattt gctcttcatc catactagaa tgtcttgaat gaggcattaa aaccttttca
    10621 tctaaattcg ttaaaagtaa atcaggtgaa attttatcat gcttataaat tccaaaaatt
    10681 ttcttatcta aagcgatttt atctacgcca tgaaaatgtt ttaaagcagc catagcaccc
    10741 caacaaatat acatagaact tgttacattt tgctgtaaaa aatcaaaaat ttctaacaat
    10801 tctttccagt aagcaacttt ttcaaaatcc atttgttcca caggagctcc cgtaacaata
    10861 gcaccatcaa atttgcgttt tttaacctca tcaagacctt tataaaattt ttctaaatga
    10921 gtaaaaggag tgtttttacc tacatagcta gtagtagcta aaagtgtgat atttacttgc
    10981 aaaggagaat ttgcaagtaa gcttaaaatt tgattttctg tttcaatttt ttttggcata
    11041 agattgatga ttaaaatctc ttgcggacgg atatcttgat gttttgccct ccttgatccc
    11101 atgataaaag catgttcttt taaaagctca taagcgggta tattttctgg aataataagt
    11161 ggcatttttt ctcctttatt ttttaataag ctttattctc cattctgcat cgcctaaaag
    11221 ttcaaaatca acgatctcat gtccttcttc agcagcccat tgtgggattg tttctgtagc
    11281 ctgtgtacaa tcaaaaagaa tttctaattc ttcaccgctt tttaaagttt gaaccaaatt
    11341 ctttgcttca acaagtggaa agggacaaac ctttcctcta gtatctaaag ttaccatatc
    11401 ttatccttat atcttttgtg ttgccttacg cgtaggcaat ataattgtat aaaaagtagc
    11461 tatgtaagca cctattaaga aaaataccgt agcaacccaa cctttatacg aaaaaagcga
    11521 tgtttctacc aatccattac ctatggtaca gcctccagca agagaagctc caacccccat
    11581 taaaattcct cctatgcttg cataagctag agttttttta tcaggaagac gaaatctaaa
    11641 ttcccctgat aatttagcac ctaaaaaaga tccaagtgcg attccaagaa ccaaaaaaac
    11701 tccccaatca acaaactgaa catcacctgt actaaggtat tgtacaagat ttgccgaagg
    11761 agttgtaatc cctaaaccat aatttcttcc acttaagctt gaaagaggcc aagctaaaat
    11821 tgcgatcaat gcaaccaaaa cagccgtaac aaaaggatgc catgattttt caaacaatat
    11881 gtgtgaaatt ccttgctttc taggctttaa tcttgcgact ttaaggcgtg gcttgcgtaa
    11941 ttctctaatc acaaaaaagc caacaatcaa actcaaagca agcaccaaaa tccaaggaga
    12001 aattcccaag ctttgataaa aagttccatc agaaatttta aaagtattta aattatcctg
    12061 caaaggcaaa agaactccgt attttacagc acttgcacta aaagcataaa acaataaagc
    12121 tgcgatagaa ccgatcaagc cctcccctgc tctataccaa gttcctgtag cacatcctcc
    12181 tgctatgacc ataccaaagc caaaaataat cccaccaata atcgttgaaa gccaataaaa
    12241 ctcttgaggc tttatcgaaa tatatcctaa agaatgaaga gcccaaacac caatactttg
    12301 caatgcaacg acgataaaaa gcgctataaa aattgtaaat tttttactta aaaatacatc
    12361 tctataagct cccacaacgc aaaatcgtcc cctttgcaaa acaaagccta ataacaaacc
    12421 aactataatt ccacttaaca taaacacgct ctttaacttt ctatagcttg ttttaaatcc
    12481 gctatcaaat catcgctatt ttcaagccct atgcttaaac gcacagtggt tttcttaatg
    12541 cctgcttttt gaagttcttc ttcacttagt tgagaatgag tagtagaagc aggatggata
    12601 attaaagatt tactatcacc taaatttgca gcaagtaaga aaagttgagt tttatcacaa
    12661 attcttctag catgctcata atccctagct tcaaagctta aaagtccact agcgaaattt
    12721 ttatcaaaat attttttaaa taaattatga taagcattac ttgctaaagt aggataattt
    12781 acacccttga tatcaggatg agaatttaaa aaattcgcaa ctttttcagc attttggctg
    12841 tgtttttcta tacgcactgc taaagtttca agtccttgta aaagcaacca agcattttga
    12901 ggcgctaaac tagctcctaa atctctaagc caagtgatga tgattctaat gctaaaaatt
    12961 ggcaaatcaa gtgtatttaa attcagtcca tgataacttg gatcaggagt gttaaaagtt
    13021 ttatatctat cgttattttt aagcaagtcg tttaaatctt ttctttctat aagcgctccg
    13081 cctaaagcac tgccttgacc gcttacatat ttacttaaac tatgcacgat tatatccact
    13141 ccatgtttaa aaggttggag taagaaagga gtagcaacgg tattatcaca aatggtagcg
    13201 attttatgtt tttttgctat ttgggttatt ttttctatat cagctatggc aatttgagga
    13261 tttgaaagac tttcgaaaaa aatcgctttt gtgttttgat ctataacttt ttctaagcta
    13321 tctaagtcat cgatatcaaa ttccctagct tctatgccaa aatttttaag tgtgtgagaa
    13381 attaaagttt gagttccacc ataaatttta tttgaatacg cgacattatc tcctgaactt
    13441 gctaaattcg caagggcata aaaacaagct gccataccgc tagaaacagg aattccaaaa
    13501 gccccaccct caacattagc aagtctttgt cctaaaacat cgcttgtagg attgcctatc
    13561 cttgagtaaa tattgccaag ttcttgaaga ttaaatctcg ctgcagcctg atctaaattt
    13621 tcaaaattat acgcagtatt ttgatatata ggcacactaa tacttctttg agtgtcaaaa
    13681 ttataagctc catgtaatgc taaagtttct ttattaaaat tcatttttta tccttttttg
    13741 ttaattaaaa aaatactaaa aagcctttta tcagctttaa actagattgt ttggaaatgt
    13801 aaatttatag aatatgagta tatacgagta gattaagcgt gccaagcacg catacagaaa
    13861 gaagaaagca ttaagttaaa actaatataa gacatttttt ctcctttcta aaaaattatt
    13921 ggctatttta tctttaaaaa ataaaaataa aattaaattt taaaaaattt atatcacatt
    13981 gctgaaaatt ttattgcaac ccacccctag caagagtgag ttagcaataa attgaaggca
    14041 gttcaagcct aagcctagta ttacaagact accaagatag gcttgtaaag caaggcttgc
    14101 tccctttaag ggagcaaaaa acaatatttt atagaatgct aagcttaaat tattgtttaa
    14161 gctggattag agtttgaagc atttgatcac tcgttgaaat ggtttttgaa tttgcttgat
    14221 aacctctttg gatgatgata agctctgtta aagaacgact taaatccaca tttgacattt
    14281 caagagctga ggttttcatc tcaccacgac ctcctgttcc tgcttcacct actactatag
    14341 ccccactatt tgcagtgact ttaaaaagat ttccaccgat ttcttcaaga cctgagttat
    14401 ttgctactga agccattgcg atttttgcta cagcgaaggt tttgccatta gtaaattcgc
    14461 ctaagatatt acctttgtca tccacacgga tcgcatcagg ctttaagttg cctgaagtat
    14521 aaccatcggt tgcttgccct gttagagttg aagctgaatt tgaacttaca agaccatcat
    14581 tgcttccact tgttccaaag gaaagtttga tttgttggtt tggtgcggca ccgttattgg
    14641 gtgaaaaatt taaagtttta ggattgtaac tagctaaaga gccatcgttg ttaaatcttg
    14701 ctgttcctac gacgatattg tttggtcctt cacctgtagt gttgatctca gctggttcag
    14761 gcacacggat gatcatctgc cattcattac ccccatcttg agtggtgctt tgcttgacaa
    14821 actgcacttc taaagtatgt tttgaaccta aagaatcata aatttcaagc cccgctgaaa
    14881 atgctgaaag tttgagttgt tcactttctt ttttttgact tcctgcagtt tgcacaccat
    14941 caaaagcttt aaagattttg gtaaaagcgt catttgtgct aactttgcca agcgcatctg
    15001 tgtaggctgt aacattaaag cttaagtctt ttgctgttgt tgtttgtgct tgagcttgta
    15061 aagcatttgc tggaatttga ctatcttgct ttgcattaga cacggtaaaa cgcccgtcat
    15121 cacttacggt gatggttact ttttgattga tgtcttctgc tgcaaaagca ccattgccat
    15181 tataatcgac cccatatctt gcgtctcttt gcaaaagctc tcttaagtct tcagtcgttc
    15241 taaacacacg cacatcggta ttataaagac ttcctcttaa agcgtcccag tagtttccac
    15301 tggctggatc tgttggctta gtagctggat tgttatcatt atcattaaaa gctggtcctc
    15361 cgtcaggatt atacatagga ggtatatttt gcggagaact tgagtaagtg tatttgtgtg
    15421 ctgtgatgac ggctgcattt gttggacctg tgatgttagg taaattacca ccccctcctg
    15481 tggctgtcca agtagagaca ttttgatttg gattaacttc agcaaaagta aagttatttt
    15541 gtccttgttg ccaagttgca ttccataact cccctgcgga gttagcttga ttaacaacta
    15601 aattaatatt tttcatatta tccgttgtgc cgttttcatt tctatttgta aatattatcc
    15661 cagtgccgtt agcattttta ctcgctacta tacctgtgcc ttctctacct tcctgaggat
    15721 ttgtgaaggt attgatgtaa gctatggctt ggtctaagct tgtgatgtcg gcattttgta
    15781 tcgctacgcc gtttagagtg atgtcaaggc gtgttttttg attttcactt ccccaaaata
    15841 cgacattttg ttgatttgct ttattattag catcaaagcc tgtaatattc aagccattgg
    15901 ttgtaaattt agaatctgca aaactcatcc aaatcccttg cccctctcta agattaagcc
    15961 cctgaccgct accattaaag agtgagcccg catctacgcc cttttcagtt acttccatag
    16021 aatttttaga agtggtgtaa aattgagtta tgccattatc gttttcatct tttgtttcgc
    16081 ctgtcttttt attaaagcca tgcacggagt caagtgcgta aagtgggcgt gcggcgttgc
    16141 cgatatttag accactattt aaatttgcct tgatagccac ttcagtagat tttgctgcag
    16201 ggatatgcat acctggatcg atgaaaatat tttgcggagt tcttgagcta tctatacttt
    16261 gagtatccca gttgatattc cacccttgga caacaaaacc tgcattatta acaaaatttc
    16321 cataagcatc gagtttaaaa tccccactcc ttgtaagata gcgcgtaagc cccccgtcat
    16381 cactcaccat aaaaaaacca tcaccattta tagcaacgtc agtgttttta tctgtggttt
    16441 gaactgaacc ttgagaatga attctagttg tagaacttac tgaaacgcca agaccgattt
    16501 gaagtggatt agatccacct cttccatcag ttggagctgt agcgattttc acagtttggc
    16561 taaacatagt cccaaaatct gcacgggagt atttaaaacc agtggtatta acatttgaaa
    16621 tgttattacc ttcaacatcc atcgcaactt gatgtgcttg tagtccgctt acgccagacc
    16681 aaagtgatct catcatctta aatcctttat aaaatattgc tttaaaaaac ttttgcgttt
    16741 atgtgaagtt tacaagcaag ttctgttcca acttttgaaa ttttttatga attttttaaa
    16801 aatttataga aaaaatttaa aggtatttta ggagtttatg aagctttggg cttttgtgta
    16861 ataaaaatta ctaaaatcac accctaactc ttaaatttgc tgcatgggtt aaagctactg
    16921 caatagcatc tgtgatatcc aaaggcttga tatctttact aagtcctaaa aatcttttta
    16981 ccataaaagc aacttgttct ttggttgctt tggcttttcc tgtgacggct tttttcactt
    17041 gtaagggagt gtattctgca aagtctccat gaatttgaag aatttttaaa gatagagctc
    17101 cgcgaaattg tgcgagtttt aaaacggttt ttggattgta agcaaaaaag atatcttcta
    17161 tagccacctc atcaaaagaa tgatttttaa aaatcaaatc caaaccctca caaagctctg
    17221 tgatttgata ctgtaaagta ctgggtttta tctttataag tcctgcttcg attagggtat
    17281 ttttaccttt atttgcttct atgatagcat aaccacaatt tcttgaacca ggatctatac
    17341 ctaaaatttt caatcttcca ccttaatcaa taatgaaatg caaaagcttg attttaacct
    17401 ttttttataa aatttaagat aaaatttata agcttacaaa gactaaagag agattatgaa
    17461 tccaaatcaa atacttgaaa atttaaaaaa agaattaagt gaaaacgaat acgaaaatta
    17521 tatcgctatc ttaaaattta acgaaaaaca aagcaaagca gattttctag tctttaacgc
    17581 tcctaatgag cttttagcca aattcataca aacaaaatac ggtaaaaaaa tttcacattt
    17641 ttatgaagta caaagcggaa ataaagcgag cgttttgata caagcacaaa gccaaaaaca
    17701 tagtagcaaa agcactaaaa tcgatatcgc tcatatcaag gcgcaaagta cgattttaaa
    17761 tccttctttt acttttgaaa gctttgtagt gggggattct aacaaatacg cttatggagc
    17821 ttgtaaagct atctcacaaa aagacaaact gggaaaactt tataatccta tctttatcta
    17881 tgggcctaca gggcttggaa aaacgcactt gcttcaagct gtgggaaatg caagtttgga
    17941 aatgggaaaa aaagtgattt atgctacgag tgaaaatttt atcaatgatt ttacttcaaa
    18001 tttaaaaaat ggctctttag ataaatttca cgaaaaatat agaaattgtg atgttttact
    18061 catagatgat gtgcaatttt taggaaaaac agacaaaatt caagaagagt ttttctttat
    18121 atttaatgag attaaaaata atgatgggca aattatcatg acaagtgata acccacccaa
    18181 tatgctaaaa ggtatcaccg aacgcttaaa aagtcgtttt gctcatggta tcatagcaga
    18241 tatcactcca cctcaactgg atacaaaaat agccatcata cgcaaaaaat gcgaatttaa
    18301 tgatatcaat ctttctaatg atatcattaa ttatatcgcc acttctttag gggataatat
    18361 aagagaaata gaaggtatca tcataagctt aaatgcttat gctaacatac ttggacaaga
    18421 aatcaccctt gagctagcaa aaagcgtgat gaaagatcat atcaaagaaa agaaagaaaa
    18481 tataagcata gaagacattt tatctttgat ctgtaaagaa tttaacatca aaccaagcga
    18541 tgtgaaatct agcaaaaaaa ctcaaaatgt cgttactgca agacgcatag caatctacct
    18601 agcaagggaa cttacaagcc ttactttttc acaacttgct aacttttttg tgatgaaaga
    18661 tcacacagct atttcacata gtgtgaaaaa aataaaagaa ctcatggaag atgatgagca
    18721 aataaaaaca aaaatcgaag aattaaaaaa caaaattctt acaaaaagtc aaagttaagt
    18781 gaagaaatgt gaaaagaaaa aaagcaaaat gtgaaaaaat ataattaagc aaaatatggt
    18841 aaaatacaaa tttaataatt ttttgctaaa gaatttcaca atttcaatag tcttattatt
    18901 acaatgaatt taaattatat ataataaagc caaggagaaa aaatgaaact aagtatcaat
    18961 aaaaataccc ttgaatcagc ggtactttta tgtaatgcct atgtagaaaa aaaagattct
    19021 agcaccatca cttcacattt actttttgaa gctgatgagg ataaacttat cattagagcg
    19081 agtgattttg aaatagggat aaactataaa ataagaaaaa ttcgcgtaga aagcggtgga
    19141 tttgctactg caaatgcaaa aagcatagcc gatgtgataa aaagtttaaa caatgaagaa
    19201 gtggtattag aaaccataga taatttttta tttataagac aaaaaagtac aaaatacaaa
    19261 cttcctatgt ttaatcatga agattttcca aatttcccta aaacagaagg taaaaaccaa
    19321 tttgacattg attcaagtga tttaagtaga tctcttaaaa aaattctacc aagcattgat
    19381 actaacaacc ctaaatattc tctaaatggt gcatttttag atataaaaac agatagaata
    19441 aatttcgttg gaaccgatac aagacgcctt gcagtttata ctcttgaaaa agcaaataat
    19501 caagaatttc acatcagcat tcctaaaaaa gctatcatgg aaatgcaaaa acttttttat
    19561 gagaaaatcg aaatttatta tgatgaaaat atgcttatcg ctaaaaatga caattttgaa
    19621 ttctttacaa aacttatcaa tgataaattc cctgattatg aaaaagttat cccaaaaact
    19681 ttcaaacaag aacttaaatt ttcaactgaa gattttatag atagtcttaa aaaaatcagt
    19741 gttgtaactg aaaaaatgaa acttcatttc aacaaagata aaattatctt tgaaggtata
    19801 agcttagata atatggaagc aaaaaccgaa cttgaaatcg aaacaggagt aagtgaagaa
    19861 tttaatctta atatcaagat aaaataccta cttgatttct taacttcaat cgaagaagaa
    19921 caattcactt taagtgtaaa tgaacctaac ttagcctttg tagtaaattc tcaaggctta
    19981 tctatggtta tcatgcctat gattttataa aaacttaaaa tcttgagtta aaaggaaaaa
    20041 tatgcaagaa aattatggtg cgagtaatat taaagtttta aaaggcttag aagctgttag
    20101 aaaacgccca ggtatgtata taggagatac caatataggc ggacttcatc atatgattta
    20161 tgaagtagtg gataattcta tcgatgaagc aatggcagga cattgtgata ctatagatat
    20221 agaaatcact accgaaggaa gctgtatcgt tagcgataat ggtcgtggaa ttcctgtaga
    20281 tatgcaccct actgaaaata tgccaaccct aaccgtcgtt ttaaccgttc ttcatgcagg
    20341 gggaaaattc gataaagaca cttataaggt ttcaggaggt ttgcatggtg tgggcgtttc
    20401 agttgtaaat gcactttcta aaaaacttgt agctacagtt gaaagaaatg gagaaattta
    20461 tcgccaagaa ttttcagaag gtaaagtcat cagtgaattt ggtgttatag gaaagagcaa
    20521 aaaaacagga actaccatag aattttggcc tgatgataca atttttgaag taacagaatt
    20581 tgattatgat attttggcta aaagatttcg tgaacttgca tatttaaatc caaaaatcac
    20641 tataaatttt aaagataatc gtgtaggcaa aagtgaaagt tttcattttg agggcggaat
    20701 ttcacaattt gttagcgatt taaataaaaa agaagcttta accaaaccta tattttttag
    20761 cgtagatgaa gaagatgtaa atgtagaagt agctttgctt tataatgata cttatagcga
    20821 aaacttgctt tcttttgtaa acaatatcaa aacccctgat ggtggaacgc atgaagctgg
    20881 atttagaatg ggtttaacaa gagtgattag caactacata gaagcaaatg ctagtgctag
    20941 ggaaaaagac tctaaaatca caggcgatga tgtgcgtgaa ggacttatcg ctgtagtaag
    21001 tgtaaaagtg cctgaacctc aatttgaagg acaaaccaaa ggaaaacttg gctcttctta
    21061 tgtgcgtcct atagtttcaa aagcaagttt tgaatatctt agtaaatatt ttgaagaaaa
    21121 tcctatcgaa gcaaaagcta ttatgaataa agctttaatg gcagctagag gaagagaagc
    21181 agcaaaaaaa gcaagagaat taacgcgtaa aaaagaaagc ttgagtgtag gaactttgcc
    21241 tggaaaatta gctgattgtc aaagtaaaga tccaagtgag agtgaaattt atcttgtgga
    21301 aggggactct gcgggcggtt ctgcaaaaca aggaagagaa agatcttttc aagcgatttt
    21361 gcctttgcgt ggtaaaattc taaatgttga aaaagcaaga ttagataaaa ttttaaaatc
    21421 tgagcaaatt caaaatatga ttaccgcttt tggctgtggt ataggtgagg attttgatct
    21481 ttcaaaactt agatatcata aaatcatcat catgacagat gcggatgttg atggatcaca
    21541 tatacaaacc ttgcttttaa ctttcttctt ccgttttatg aatgaacttg tggctaatgg
    21601 acacatttat cttgcccaac caccgcttta ccgctataaa aaaggtcaaa agaaagaaat
    21661 ttatctcaaa gatgaaaaag ctttgaatga ttatctcatc gaaacaggta ttgaaagttc
    21721 taattatgaa ggaattggct taaatgattt aaaagatttt ctaaaaatcg ttgccgctta
    21781 tcgctcggta ttaaatgagc ttaaaaagcg tttcaatgtg atttctgtga ttagatattt
    21841 gatcgaaaat cctgacttta tcaaagaaaa taatgaagaa ctttttaaaa tcgttaaagc
    21901 ttttttggaa aaagaagggc ataatatttt aaatcattat atcaatgaaa atgaaattcg
    21961 catttatgtg caaactgaaa atggtttgga agaacttatc atcaatgatg atttattttc
    22021 acaccctctt tatgaagagg caaattatat ctttaataaa ataaaagatc gtgatttgag
    22081 ctttgaaaaa gatattttag atatcttaga tgaagtagaa aaaaatgcca aaaaaggtgc
    22141 ttatatccaa cgctataaag gtttgggtga aatgaaccct gaacaacttt gggaaacaac
    22201 tatggatcca agcgtaagaa gacttttaaa aatcactatc gaagatgcac aaagtgctaa
    22261 tgatactttt aatctcttca tgggcgatga ggttgaacca agacgcgatt atatccaaac
    22321 acatgctaaa gatgtaaaac atttggatgt gtaaaaattt tttagtgtca gattgtaaat
    22381 ttgacactaa attttatctt tttgtttaaa aatttcacac tttgttacaa taattcatat
    22441 tttatcttta ctcaaattat tttttaaatt tatagattta taatttgtaa tactaaatac
    22501 ttaaaaggat taattcatgt tagaagtttc gcgtagaaat tttttaaaag ctacggcttt
    22561 aagtgctgtt tgtctttctg gtttgaatgc ttcttttttg gaattttctc aagctaaaca
    22621 agtgaaatat tttatcaaag atagtgaaat tcctcatcaa ggaaatttca ttaacgcgga
    22681 tgaaatttta cttattgaaa aagatatcag caatatttac tcacaactta aagaagcttt
    22741 tgaaaataaa gcactcattg gaagtgtgag tagtgggaca actttttttg tgatccgcac
    22801 tatggcggcg gattatggta tgcgtgttgc gtatgaaaaa aacaaggtga tttttatact
    22861 tggattttgg caccaaaagg agttaaatta taattttacc aaaaaatgtt tcgcaaagtg
    22921 attttacagc tgcagtagca aaatttgaaa aagctttggg taaagagtgg gtatttaaaa
    22981 cctaagagga tttagatctt tatagagatg cgtatagccc gcaatgggat gatgatgacg
    23041 aacctatccc ttctttagcg cttgcaccta aaaatgtgga agaagttcaa gctatagtta
    23101 aaatagcaaa tgaatttaaa attcctcttt ttcctatttc cacaggtaag aatttaggct
    23161 atggttcttc tgcaccacag caaagagggc aggttgttgt agatttaaaa agaatgaata
    23221 aaatcatcga agtagatgat aaaagaaatt tctgtatcgt tgaacctggg gtgagttatt
    23281 ttgatcttta taagtatgta gaaaaaacaa tctcaatgtt tttttagata ttcctgatcc
    23341 aggttggggt tctccacttg gaaatgcttt agatcatggt tggggatata gctatgggat
    23401 gtatcgtgat cactttggct cgcattgtgg gatggaagtt gttttggcta atggagaaat
    23461 tttacgcacg ggtatgggtg ctttaccaaa agctaagact ttcgcagaaa ataaatacgg
    23521 ctatggtcct tatgtagatg gacttttttc acaatctaat ttcggtatcg ttacaaaaat
    23581 gggcttttgg atgatgccaa aaccagagca ttatatgctt ttatctataa aaatgaaaaa
    23641 acgcgaggat ttgatcccag tggttgaaat tttaaattat cttgaggata gttttattgt
    23701 gggttggccg cagtatttta gtccattaaa tccaccttat ggaaaaccga tgaatgcgga
    23761 gttaaaaggc tatcttacaa gtaaaaatgg cttacctgat atggataaaa ttcaaaatta
    23821 tgctttgaaa aataaaatcc cttattggaa tatcgatgtt tcagtttatg gctgtaaaga
    23881 agtgtgctat gcaaatttag aatatatcaa gcaaagattt aaaatcattg aaggtgtaga
    23941 tatttctatc gttcaagaat ttagtttacc tttgaatttg gagcaaaaaa agcagcttaa
    24001 acataaggtt actcttggaa ttccaaatat ggaaattttt tggcttagca caagaggtga
    24061 ggttttagaa ccaagtgatg ggcatgtatg gttttcacct attattccac gcgatggtaa
    24121 agaactttta aaatgccaag aagtgtatat gaatttattt agagaatttg gggaagaatc
    24181 tcctataaca cctttttcgc atcctagaag ttggatgtat cgtgcatttt gctttatgtt
    24241 agcctttaat aactcaagaa ccgataaagc acacaattaa aagtgcgtaa aatgtatcgt
    24301 caaatggttc aaactgctgc agaacatgga tggggagatt atcgcgcagc ttaaagattg
    24361 tattgatcca aatggaattt tagcacctgg tcgtggaggc atttggccta aaaatttaag
    24421 agatgagcgt tttgttaata acaaacgcga cgcattaaga atgaaagaag gtaaagaaaa
    24481 atgaaaaaaa tcgctttatt ttttgtttta tttgtttgct tgctgaattt aaatgctaag
    24541 gataaagaat ggttgccaaa gggtgaatct ataagtgttt atgagtatat tccaaacaat
    24601 ccaagatccc ctgcagcatt ttcaagcgtt gatagtaaaa aattaaatgc aaatcaaaga
    24661 aagggacagc aagtttatag taagtggtgt atagcatgtc atggcgaggg aatgcctgcg
    24721 cttttagaag atagaacgga tttaagccct gatttggtaa cgatttttgt gcgttatggt
    24781 aaacattcaa tgccgttttt ccgtaaaact gaaatcagcg ataaagaatt gcagtattta
    24841 ggtgagtatt tgggtagaaa ctacaaataa agataaactc taaaggactt tatgttaagt
    24901 aaagtcctaa aatacttttc taatgagaat atttactggt ttaaatttaa aaaagcttct
    24961 gtgctaaatg taaagaagct ttttttgttt aatgcgccac agcttcactt actcccacac
    25021 cgctttgagc tctaaaatct tgtgcttcaa aaccttcttt atctttttta gctcttttag
    25081 aattatccaa ttttgaaatg atataaatga gtataaaact taaaggcatt gaaaataaag
    25141 caggatgatc ataaggaaaa atagcttcac taaaaccaaa actttttacc catatactag
    25201 ggcttaaaat cacaagagca agaacgacta taagtcctat aagtccaccc caaaaagcgc
    25261 ctttagtggt aagatttttc caataaatac agagtaaaag tataggaaaa tttacactcg
    25321 cagcaatagc aaaagcaagt cctacggtaa aagcaacatt ttgtttttca aagacaatgc
    25381 ctagcaaaat agcaaaaatt cctatagcta tagttgcgat ttttgtaact ctcatttcat
    25441 cttcatgttt gacatcaccc tttttgataa cattgacata taaatcatga cttatagctc
    25501 ctgcacctga aatcgcaagt cctgcaacga ctgctaaaat agtagcaaaa gctactgctg
    25561 aaataaatcc taaaaagaca tctccaccca aaacatcagc taaggtaact gctatcatat
    25621 tactagcccc attaaaactt ccatcagcgt tagtaaattg aggattacca agtaagagcg
    25681 ctatagcacc aaagcctatg atgaaagtaa gtatgtaaaa ataccctata aatcctgttg
    25741 cataaaatac tgactttcta gcttctttag catcttttac ggtaaaaaat cgcataagta
    25801 tatgaggtaa acccgcagtt ccaaacataa gagccaagcc taaagaaaga gctgatacgg
    25861 tatcaggcaa aaaagtccct ggtttcatta tgttttcacc ttttggatga tgagaaatgg
    25921 ctaaatcaaa ataatatttt aaatcaaatt tcgtaaggta taaaatcata acagccataa
    25981 aagtagcccc tgctagaagt aaaatggctt tgatgatttg cacccaagtg gttgcgtgca
    26041 ttcctccaaa ggttacataa caaatcatta aaattccgac caaaacaacc gcaaaagtgt
    26101 aaggtaaacc aaaaagcaat tgtatgagtt gtcctgctcc taccatttga gcaataagat
    26161 aaaagataat aacgcttaaa gcagaaatag ctgatataac gcgtataggc ttagcttcta
    26221 aacgataagc ggtaatatct gcaaaggtaa atttgccaag atttctaaat ttttctgcaa
    26281 ttaaaaataa aataataggc caacccacta aaaatcctat agaataaata agcccatcaa
    26341 agccattagt aaaaactaaa gcggtaattc caagaaagct tgccgcactc atataatccc
    26401 ccgctatagc tacaccattt tgcattcctg tgatatttcc tccggcggta taaaatccac
    26461 ttttggattt ggattttttg ttagaataat aggtgataaa caaagtagct aaaacaaaga
    26521 ctaaaaacat accaacagca gttatattta taggtttttg atgaacttct cctagatcaa
    26581 aaccggcgct taaggctaaa ttaaagatta aacttaaaaa tataaagact ttcatactag
    26641 ctccttataa ttgatttttc catcttttaa cgcatcaagc aacccttcat tttccaagtt
    26701 tttaatcact tcttcttgct ctttatcaag aaaataattt gcgataaaag tgtaaattcc
    26761 tgtggaaata atacacaata aaatcaggcc aatgcctacc ataataccaa gcgtgatgga
    26821 actaggaccc agtttatacc ctaaaatttc aggcataagt cctataccta aaacaaagat
    26881 atagtaacaa ataagcacta tcaaagatag gttaagagat attttgtttc taaaagaaac
    26941 aaacttttta aatctcaaaa cagcattttt ttgctccgca tttaaattca tgggtactcc
    27001 tttcaatgtt tataattcaa tataacaaaa aattcaatga atta
//
LOCUS       DAQUWA010000015        26654 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.015, whole genome shotgun sequence.
ACCESSION   DAQUWA010000015 DAQUWA010000000
VERSION     DAQUWA010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26654
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.015"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(66..1112)
                     /locus_tag="R8X70_000569"
     CDS             complement(66..1112)
                     /locus_tag="R8X70_000569"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HEF2928373.1"
                     /translation="MKKLLLCVWVFLSIGVCMAEAKPKIAILATGGTIAGSIDSAVAT
                     TGYTAGVVGVDVLIKAVPQIQDLANISGEQVANIDSSNMRDEIWLKLAKKINKLFDEG
                     VDGVVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALAA
                     DKEAKNKGVMVAMNDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNISK
                     AHTKNSPFDVSKLTSLPKVDILYTYSNDGSAIAAKALFDNGTKGIVVAGSGAGSIHED
                     QKNTLKELIKQGLDVVVSSRVAAGRVAVSDADKKLGFISAEDLNPQKARVLLMLALTK
                     TNDPKKIQEYFLKY"
     gene            complement(1198..2769)
                     /gene="recJ"
                     /locus_tag="R8X70_000570"
     CDS             complement(1198..2769)
                     /gene="recJ"
                     /locus_tag="R8X70_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEF2928374.1"
                     /translation="MKTIDKNEIRKILASRFEKDLHTKLCDLPLPCCLKDIYKAANRI
                     KEAIDKNEKIAIVGDYDVDGIISCVIMAEFFDDIGFDYTVRIPNRFKDGYGLNAEIIN
                     ELDVNLIITVDNGIAAFEAAKLCKEKNIDLIITDHHMPQDTLPDAFAIINPKQKDCDF
                     PDIEICGAQVAWYLIAALKEVCKLKYDMGKFLELLAIAIVADMMELRDLNRALVRRGI
                     ECINKSKRVAFKAIKQYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDLD
                     KASAYLEQIISFNESRKDEEKQLFEDSLSQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNDQRLKGSARSVGKIDILALISKANFILSNYGGHKGAAGLSLDLDS
                     FEKFKTIIKKECMEISQSEFLDTDEILGILDPNEIDFEMLEILESFEPFGHKNPRPFF
                     ILENLYVKNKKFLGKDEKHLKLILTKDNKTIEALFFNFDKEPQLYENISLLGSISKNE
                     FRGLATPQFIIKEIL"
     gene            complement(2756..4390)
                     /locus_tag="R8X70_000571"
     CDS             complement(2756..4390)
                     /locus_tag="R8X70_000571"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEF2928375.1"
                     /translation="MNKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKAD
                     PYINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVI
                     EKERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIR
                     ALRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKAL
                     DRDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILNPIASILDLKNLKPNME
                     NWDILVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTRVELQWVDSEK
                     LENLESAEAFKNVSGILVAGGFGYRGVEGKIKAINYARENKIPFLGICLGMQLALVEF
                     ARHVLKIEDANSSEFDDKCSNPIVYLIDEFMDASGKKQIRTAKTPLGGTMRLGSYECK
                     VKPNSLLAKVYNNAKNIKERHRHRYEANPKYRKEFEDKGLIVSGESEGLIEAVELNNH
                     PFFLAVQFHPEFTSRLERVNPVICGFIKAAISYEDD"
     gene            4503..5126
                     /locus_tag="R8X70_000572"
     CDS             4503..5126
                     /locus_tag="R8X70_000572"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HEF2928376.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFDKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNEGEFKIGD
                     FENASRYLVLCGNEEVDNASIQALENLRLILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQDHQFIFEHCLHKDIH"
     gene            5244..6629
                     /locus_tag="R8X70_000573"
     CDS             5244..6629
                     /locus_tag="R8X70_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEF2928377.1"
                     /translation="MDKQFFQMFLMFSQIQTVAIIAVLFVIFYILKKMRDKKVNFSLR
                     MLFALFIGLGFGFALQYLAQFPDSKEASAIIWYNEAKHWFGFVSSVFVAFIKMLVIPL
                     VGICIIKVIIEIDKNIKISSLLSISLFWILFSTAIAASLGILLAYNFQLGDNFTAYEG
                     TRQIREIQTFSSIILGLIPSNIISVMNKENIIAIVIFAFFVGICAKKVSKKEEYAQAF
                     QTFENFVLVFYNIMMNMTAAVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIILTYIA
                     MFIMFGVHFLFLASQGLNPIKYAKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNP
                     AVANFVASIGTTTGLNGCAGYFPAMAAIFVAFATHTPIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGDNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKAIDKEIYNS"
     gene            complement(6661..9030)
                     /locus_tag="R8X70_000574"
     CDS             complement(6661..9030)
                     /locus_tag="R8X70_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEF2928378.1"
                     /translation="MKVIKRNGRTEELDVSKIKKCTFDAIKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLREYF
                     EKGEKEGRILLGLKEKYDLDDLNDYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSYQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDVSDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTQDLCDLYGEAFEKRYEEYEKDESIAKEIVEAKELWKKILLN
                     YFETGLPFLCFKDNANKANPNAHVGIIRSSNLCTEIFQNTEPNYYKIKVVFENGDEKH
                     FDEEERVIIDGGYEKPAKKISTLDSFNGNKVYIVEKYKSDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEARIHWG
                     SDEHLNKIDEIMEKISYEAINASSNLAIEKGSYPDFEGSNWSKGIFPIDVASEKAKAL
                     TLREGLFNQSECDWDKLREKVKEDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLETWQYYTPAYELDQRILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNDIYQLAWELGVKSTYYLRSESPDSEKINIADRSIECEGCQ"
     gene            complement(9045..10373)
                     /locus_tag="R8X70_000575"
     CDS             complement(9045..10373)
                     /locus_tag="R8X70_000575"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEF2928379.1"
                     /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLINDTD
                     CEKILKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQMKESLDLILEDVSLLLEVIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ILHAKELLEHAREVISYGKISGAMGNFAHAPLEFEEEVCKNLDLKPAPVSNQVIQRDR
                     YAQVISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVTPALENVALWHERDISHSSVERFILPDAFVTADFMLMRLTNLIDKL
                     LVYPENMMKNLNLTGGLVFSQRVLLELPFKGISREEAYKIVQRNAMKVWADLQNGKAA
                     INEKNESLFLLALLADEDLRKSLSEEDIRKCFDYNYYTKNVDAIFARTFK"
     gene            10453..11349
                     /locus_tag="R8X70_000576"
     CDS             10453..11349
                     /locus_tag="R8X70_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEF2928380.1"
                     /translation="MAYTKIKLSNNGKKAFQVLIDNLKININEAQKLIDKKRLFCDGI
                     LVEEKNKILKGDVELIVYENNPKGVEIVFENEDFAVLEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKKACVAHRLDKETSGLILVAKHKKAQIELKTMFEKKQIQKEYLALASGEIK
                     VNFIVDQAMDLTKDYDDVKTRMQICENGKKAITEFEVLSFYPKLNATLLLCKPLTGRQ
                     HQIRVHLFYKNHKILGDPLYGLEKKDIEKILDDKMDIEERIKLSGAKRLCLHSYRLKF
                     NYNGENFDIFSKKGMEKILAAF"
     gene            11470..12336
                     /locus_tag="R8X70_000577"
     CDS             11470..12336
                     /locus_tag="R8X70_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEF2928381.1"
                     /translation="MKFVNFKFNQKATLGVFNSSGKVVNLADLDINVRDMNELIINFD
                     EFKHKFKDLDSKTAYEIPKEDYLAPIIEPRQDIICLGINFLDHAKESAQFKGEKFEER
                     EYPVYFGKRCNQATAPFGSISLHADVTSQLDYECELAFILSKDAYKIKAEDAKDYIFG
                     YTIINEISARDLQKRHKQFYRAKSLEGSTIMGPYITSVDEIAYPPELHLKSYVNKELR
                     QNSNTKFFIFDIGYVLEELSSGMLLKAGTIISMGTPSGVGMGLNPPVFLKKGDEIRCV
                     IENLGEICNIIS"
     gene            12384..12551
                     /gene="dba"
                     /locus_tag="R8X70_000578"
     CDS             12384..12551
                     /gene="dba"
                     /locus_tag="R8X70_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HEF2928382.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGH
                     KTGALLTIMNL"
     gene            12566..14083
                     /locus_tag="R8X70_000579"
     CDS             12566..14083
                     /locus_tag="R8X70_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEF2928383.1"
                     /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANFVFGYMLGDSPCTL
                     CWGQREAMIFIGVIALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVMFAFAPKFGSFDKELNGEKFRKFTKFSFAAVL
                     ISTLIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSTEGWNGLWQNISFLGKR
                     DVKAPDYAFAPASEKLGIKFDNNTNNSPFAEIDDELKIINEQTINFDKAINTLDYIND
                     EFVASSKWDVAFLDNNFSVKEGFELDPYFSATIDPIIGIIPYKENKFLLMGSNKSFLR
                     FAKNPNADETLQYADFIKGNDKFEGQGESLGRGRLDTVRAKFNHVASMTTDDHYLYLA
                     TVPNNKDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIYALS
                     KNHNVIAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN"
     gene            complement(14104..14778)
                     /gene="queC"
                     /locus_tag="R8X70_000580"
     CDS             complement(14104..14778)
                     /gene="queC"
                     /locus_tag="R8X70_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEF2928384.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKE
                     KECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVC
                     IKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKAGFKD
                     KIKYKS"
     gene            14854..16080
                     /locus_tag="R8X70_000581"
     CDS             14854..16080
                     /locus_tag="R8X70_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HEF2928385.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIE
                     DIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHTIINDYEMK
                     LINDRILPFVPENLRAEFSYILGIREGRSNEASFVKNEFENRTYKNAKIELCSGSLSS
                     FNQNEFGAIDGKALKYCDKIAAFIEAGLSISYGVKSKELENGFEDMFRFFNESPTIDG
                     VNFLEICREFRDYFKI"
     gene            complement(16127..17803)
                     /gene="ilvD"
                     /locus_tag="R8X70_000582"
     CDS             complement(16127..17803)
                     /gene="ilvD"
                     /locus_tag="R8X70_000582"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEF2928386.1"
                     /translation="MRSDAIKKGHLKAPNRSLLRACGLKDEDFDKPFIGVANSYIDII
                     PGHYFLNEYAKIIKDEIRKNGCIPFEFNTIGVDDGIAMGHEGMLYSLPSREIIANSVE
                     SVMNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMRSGVTKKGEKISLSS
                     VFEAVGAYEANKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRKAARRICEIALDERFKIKNIITQKAIRNAMVVDMAMGGSTNTILHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNTVYMDDIHKAGGVSAVMAEISSRE
                     GHILELDALTITGESLQDRLKNAKIKDETIIRKVDNAYSKVGGLAVLFGNLAEQGCVV
                     KTAGITGERKFKGKAVCFNSQDEAIKGIIKGKVQKGDVCVIRYEGPKGGPGMQEMLSP
                     TSLIMGMGLGADVALITDGRFSGATRGLSIGHVSPEAAEGGLIGLLKDGDEIEIDVDA
                     YIINANLSDEEIAKRKNDFVMPQKEVKSRWLRMYQKLVTNASKGAVLDME"
     gene            17954..18601
                     /locus_tag="R8X70_000583"
     CDS             17954..18601
                     /locus_tag="R8X70_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HEF2928387.1"
                     /translation="MRQYESYKCPKCGNEVEVQNVGGGKLSCCGVEMECITQDLTAIN
                     LMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDG
                     KPLEVTTKNLVTAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREY
                     LALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
     gene            18639..19214
                     /locus_tag="R8X70_000584"
     CDS             18639..19214
                     /locus_tag="R8X70_000584"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEF2928388.1"
                     /translation="MKTLFEENELLTPFDINLIGIDEAGRGALAGPMMMAACKLHKDL
                     EGLCDSKKLSEKRREELYEIIIKNSNYLILAFSSKKIDEIGLSACLKMGLTLIKKHFK
                     TENNFLYDGNTNLGISGIKTQIKADANIKQVSAASILAKVSKDRVMNFLAKDFPCYEF
                     EKNKAYGTKAHKELIAKFGICKLHRKSFKLL"
     gene            complement(19215..20660)
                     /locus_tag="R8X70_000585"
     CDS             complement(19215..20660)
                     /locus_tag="R8X70_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEF2928389.1"
                     /translation="MGNARGFLDFKRVDFKKVAPKERVLNFKEFTTLLDKKEQEIQGG
                     RCMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLIYRSLWKEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGKSVSIKNNELAIIENAFKENLVSPNKPKQYNGKKIAVIGS
                     GPAGLACANTLNSLGYKVSVFERSDKVGGLLMYGIPDMKLDKSIVDRRVDLLKESGIE
                     FKVNENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADTAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQSNP
                     WPLKADIFTTDYGLEEAIAVYGKDPREYQKMTKKFLGKDKVESVEACDLKREFKEGKA
                     INVELPNSNQNYKADLVLLAMGFSGSEDAIASNFGVSLDEKNNVKTKNFQTTHEKIFA
                     CGDARKGQSLVVWAIKDGIECALNIHENLAK"
     gene            complement(20670..25160)
                     /gene="gltB"
                     /locus_tag="R8X70_000586"
     CDS             complement(20670..25160)
                     /gene="gltB"
                     /locus_tag="R8X70_000586"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEF2928390.1"
                     /translation="MDLENILENNQSVGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFMTQELGFELPQKGDYAVAQMFLS
                     PNADAKEEAKAIFLQGLKDKNLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPST
                     VNAGLEFERVLYACRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMESEY
                     FENLDEIFPIIAKPSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMGSKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGAL
                     KLDENNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKQWLKNLVELEKQH
                     SGVYKHKFLKEDEVLKLQKAFGWSYDELKMSVASMAQNGKEALAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKISLPI
                     ISNEELFEVKALNNFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDQ
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIANKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKDGVNK
                     NSAIKQVASGRFGVDLNYLSHAKELQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKNANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVMGCTMMRVCHLNTCPFGIATQDKELRDRFKGKVDDV
                     VNFMYFIAEELREYMARLGFERLDDMIGRVDKLRQKPMQGKAGKVNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALSEDSIQIKAIGNAGNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATKGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCE
                     YMTGGQVVVLGDVGANFAAGMSGGVVYIFGRHNEAHVNTELVDIKDLSTKDEKELKTM
                     IENHIAYTNSKKAKDILEKFDKKDFFKVMPRDYEKMLEMIELCKDEEDPSLAAFLKIT
                     QK"
     gene            complement(25294..26595)
                     /locus_tag="R8X70_000587"
     CDS             complement(25294..26595)
                     /locus_tag="R8X70_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEF2928391.1"
                     /translation="MTLLTNPIIISVVLMTLLCLFRFNVLLSLLISALVAGIFSHIEI
                     METMSILIDGMKGNLKTALSYILLGAIAAAISRTNLTAYLIKVVSRFISHKKYLLLLS
                     IALISCFSQNLIPIHVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLPIG
                     FGLNFQDLLRENLEKNGVNVNLADVTNAMYYAAICMVLGLFLALFVFYRKPREYQEIE
                     IQKIDFDNIKMGRKEWGVLVGLILTLVLQIFTMNLPLSGLLGFISMVILGGVEYKSVN
                     DIFDDGLKLMGFIAFVMLVAAGYGEVLKQSGAVNELVNSVVPWMQENKFLAVFLMLLI
                     GLIITMGIGTSFGTIPIIATLFCPLCLELGFSAALIIFILGVAGALGDAGSPASETTM
                     GTSVGLSVDKQHDHIKDTCIPTFIFYNGPLLILGSIIAMFL"
BASE COUNT         8655 a         5016 c         3967 g         9016 t
ORIGIN      
        1 aaggatgaaa atactgaatt tagagaagat aaatatcctc tctaaacttt tagaaatgcc
       61 taaattcagt attttaaaaa gtattcttgg atttttttag gatcatttgt ttttgtaaga
      121 gctagcatca aaagaactct agctttttgt ggatttaaat cttcagcact gataaaaccc
      181 aatttcttat ccgcatcact caccgcaacg cgtcctgctg caacccttga acttacaaca
      241 acatcaagcc cttgtttgat gagttctttt aaagtatttt tttgatcttc atgtatgctt
      301 cctgcgccac ttcctgctac aacaatacct ttggttccat tgtcaaataa agcttttgca
      361 gcaatagcgc taccatcatt tgagtaagta taaagtatat ctacctttgg taagcttgtg
      421 agtttactta catcaaaagg gctatttttt gtgtgtgctt tgcttatgtt attatagaag
      481 aaaacttttc catctactat atagcccaaa tctccaaaat caggagaaga aaaagcatca
      541 acatttaaac tatgggtttt taccacgccc ctagcactta aaattttatc attcatagcc
      601 accataacgc ctttattttt agcttcttta tcggcagcta atgctacagc attgtaaaga
      661 ttttttgggc catcggcact tatagcagtt gatggacgca tagcaccaac taaaactaca
      721 ggcttatcac ttttaatggt caaatttaaa aaataagcgg tttcttccat ggtatcagta
      781 ccgtgagtaa tgactacacc atctacaccc tcatcaaaaa gcttattgat ttttttagca
      841 agctttaacc aaatttcatc acgcatatta gagctgtcaa tatttgctac ttgttccccg
      901 ctgatattag ccaaatcttg aatttgtggc actgctttga ttaaaacatc tacacccaca
      961 acacctgctg tatagcctgt agtagccaca gcactatcaa tagaacctgc tatagttccg
     1021 cccgttgcca aaatagcaat ttttggtttg gcttctgcca tacatactcc tatagataaa
     1081 aatacccata cacacaaaag taactttttc acaaagcccc cttatttatt aaaattaagt
     1141 ttcattgatg aaacttatat aatattaata catattaaat aaaaatttta taaattttta
     1201 caaaatttct ttaataataa attgtggagt tgccaatcct ctaaattcat tcttagaaat
     1261 acttccaagc aaactaatat tttcatacaa ttggggttct ttgtcaaaat taaaaaataa
     1321 agcttctatg gttttattat cttttgtgag tatgagtttt agatgctttt catcttttcc
     1381 taaaaatttt ttatttttaa cataaagatt ttccaaaata aaaaaaggac gcggattttt
     1441 atgcccaaaa ggctcgaaag attctaaaat ttcaagcatt tcaaaatcga tttcattagg
     1501 atctaaaata cctaaaatct catctgtgtc taaaaattcg ctttgagaaa tttccataca
     1561 ttcttttttt attatggttt taaatttttc aaaagaatca agatctaaac taagacctgc
     1621 agcaccctta tgcccgccat aattactcaa tatgaaattt gccttagaaa tcaaagctaa
     1681 aatatcgatt tttccaacac ttcttgcact tccttttaag cgctgatcgt tttgtgaaaa
     1741 tacaaaagcg ggtttattga aatgttttgc taaacggctt gctactatcc ctaaaactcc
     1801 ctcatgccaa tttaaacccg atacaacaat acaagaatca ttttcatcaa tttgacttaa
     1861 actatcttca aaaagctgtt tttcctcatc tttacggctt tcattaaagc taatgatttg
     1921 ttctaaataa gccgaagctt tatccaagtc ctttgtatgt aaaaattcat aagaaatgct
     1981 tgcatcatcc attcttccag cactattgat aagaggagcg attaaaaatc ctatattatc
     2041 gagtgcaaat ttatcttttt gataatattg cttaatcgcc ttaaaagcaa ctcttttgga
     2101 tttgttaata cactcaatcc ctcgtctaac caaggctcta tttaaatctc ttaattccat
     2161 catatctgca acaatggcaa tagctagaag ttctaaaaat ttacccatat cgtattttaa
     2221 tttacaaacc tcttttaaag cagctattaa ataccaagcc acttgcgctc cgcaaatttc
     2281 aatatctgga aaatcacaat ctttttgctt aggattgata atcgcaaagg catcgggtaa
     2341 agtatcttga ggcatatgat gatcagttat aattaaatca atattttttt ctttacaaag
     2401 cttggctgct tcaaaggctg ctataccatt atccactgta ataatcaaat ttacatcaag
     2461 ttcattgata atttcagcat ttaaaccgta tccatcttta aagcggttgg gaattcttac
     2521 tgtataatca aaacctatat catcaaaaaa ttctgccata ataacacaag agataatccc
     2581 atcaacatca taatcaccca ctatagcgat cttttcattt ttatctatag cttctttaat
     2641 gcgatttgcc gccttgtaaa tatcttttaa gcagcaaggc aaaggtaaat cgcaaagttt
     2701 ggtatgtaaa tctttttcga aacgagaagc tagaattttt ctaatttcat ttttatcaat
     2761 cgtcttcata gcttatagcc gccttgataa aaccacaaat cacaggattt acacgctcta
     2821 atcttgaggt aaattcaggg tgaaattgga cagctaaaaa gaaaggatga ttgtttaact
     2881 ccacagcttc tataagccct tcactctctc cacttactat caagccctta tcttcaaatt
     2941 ctttacgata ttttggattg gcttcatagc ggtggcggtg gcgttctttg atattttttg
     3001 cattattata aaccttagct aaaagggagt taggcttgac tttacactca taagatccca
     3061 aacgcatagt tccacctaaa ggtgttttag cagtacgaat ttgtttttta ccgctcgcat
     3121 ccataaattc atcgatgaga taaacgatag gattggaaca tttatcatca aattcactcg
     3181 aatttgcatc ttcaattttt aacacatgtc tagcaaattc taccaatgca agctgcatac
     3241 ccaaacaaat tcccaaaaat ggaattttat tttctcttgc gtaattgata gcctttattt
     3301 taccctctac tccgcggtaa ccaaagcccc ctgcaaccaa aattccactc acatttttaa
     3361 atgcttcagc actttctaaa ttttcaagct tttcactatc tacccattga agctctactc
     3421 tagtatcaag cgctgcacct gcatgaatga tagcttctgt aagactctta tagctttctt
     3481 ttagatctac atatttaccc acaaaagcga ttttgacttc attacttgga gctataactc
     3541 tttttactag gatatcccag ttttccatgt ttggttttaa atttttcaaa tccaaaatag
     3601 aagcgatagg atttaaaata tcttgcttta agaaatttag tggaatttga taaatacttg
     3661 ctgcatcaac actttctata acgcaatttt tttctacacc gcatgaaata gcgattttat
     3721 cttttaaatc tctatctaac gctttttcac tacggcaaat aatcatatca ggactaatgc
     3781 ctatgcgtct tagttcacct acgctgtgtt gggttggttt ggtttttaac tcccctgcag
     3841 ccttaataaa aggcactagg gttaaatgaa tattcatagc attattttta cccacttcta
     3901 aacgcaaagc acgaatagct tctaaaaacg gcaagccctc gatatccccg acagttccac
     3961 ctatctctac gattaagata tccttgcctt ctcctgcttt tttaatacga tctttaatct
     4021 ctcctacgat atgtggaata acttggatgg ttttgccaag atattctccg cgtctttctt
     4081 tttcaatcac gctttgataa acgcgtcctg tggtgaaatt gttatcttgc gataaactct
     4141 catccaaaaa acgctcataa tgccctaaat caagatcggt ttctgctcca tcatctgtaa
     4201 caaaaacttc tccatgctca aatggactca tggtgccagg atcaacattt atataaggat
     4261 ctgcttttaa aatacttact ttaagtcctg aatttttcaa taaagttgca atacttgcag
     4321 ctgctattcc tttgcctaag gagcttaaca ctcctcctgt aacaaaaata tatttggttt
     4381 gtttattcat tattaataag ccttaatttt ttgtctaatt ataactcgat aaaacttttt
     4441 atttcattag aattttaagt aaaaaatgta agaattataa aaaaatttat caaggaaaat
     4501 ttatgcaaat cactttactt tttcataccc ctctttctgt atgttcgcat gcaacaagaa
     4561 cttgttggca aagttttgat aaaggagatt gtggtggaga aaaagataaa gaactcatcg
     4621 atcgcgtagg aaataaattt aaacatgcct caaccttaga gcatttaaat tatacttttt
     4681 atattcaagg aatttcaagg gcttgcttac aagaagttgc tagacatcgc catacaagtc
     4741 ctagcgttaa aagcacgcgc tacaccctaa aagaacttcg caatgagggt gaatttaaaa
     4801 taggagattt tgaaaatgca agccgttatc ttgtcctttg tggcaatgaa gaagttgata
     4861 atgctagcat tcaagcttta gaaaatttac gccttatttt acaaaaaagt ataagcttgg
     4921 atatagccaa atactgctta cctgagagtt ataaaaccga acttacttta acaatcaatg
     4981 ctagaagttt gcaaaatttt atttctttgc gtagctcaaa atctgctctt tgggagattc
     5041 gaaatttggc taatgcttta tttgaagcct tgccacaaga tcatcaattt atttttgagc
     5101 attgtttgca taaagatatt cattaaatca tactaatttt atcttattta taatattttt
     5161 atggtatcat ccataagatc aagattttat ggatatactt taaatatatt tcatacttga
     5221 tatagtttct taaaggactt tttatggata aacaattttt tcaaatgttt ttaatgttct
     5281 cgcaaataca aactgtagct attattgctg tgctttttgt aattttttac attcttaaaa
     5341 aaatgcgaga taaaaaggta aatttctccc ttcgtatgct ttttgctctt tttataggcc
     5401 taggctttgg ttttgctttg caatatctag ctcaatttcc agatagcaaa gaagcaagtg
     5461 ctatcatttg gtacaatgaa gcaaaacatt ggtttggttt tgtaagctct gtttttgtag
     5521 cttttataaa aatgctagtt attccgcttg tgggtatttg tatcattaaa gtgattatag
     5581 aaattgataa aaatataaaa atttcttcct tgcttagcat aagcctcttt tggatacttt
     5641 ttagtactgc tatagctgct tctttgggta tattattggc ttacaatttt caattaggtg
     5701 ataattttac tgcttatgaa ggaacgagac aaattcgcga aattcaaact ttttcaagta
     5761 ttattttagg tttaattcct agcaatatca tttctgttat gaataaagaa aatatcatag
     5821 ccattgtaat ttttgctttt tttgtgggaa tttgcgcaaa aaaagtttca aaaaaagaag
     5881 aatatgcaca agcttttcaa acttttgaaa attttgtctt agttttttat aatattatga
     5941 tgaatatgac ggctgcagtg attcgattta tgccttatgc tgtagtttgt atgatggcaa
     6001 atgttttact aagcaatggt tttgaagcaa tcaaaactgc aggacttttt atcattctta
     6061 cctatatagc aatgtttata atgtttggtg tgcatttttt atttcttgct tctcaaggac
     6121 taaatcctat aaaatacgca aaaaaagctt ttcctgtatg gctgtttgca ttcagttcaa
     6181 gatcttcttt agggacttta ccgatgacga cttcaacttt gcaaaacaaa tttggagtaa
     6241 atcctgccgt ggctaacttt gttgcctcta taggaacaac aacgggactt aatggttgcg
     6301 cgggttattt cccagctatg gcagcaatct ttgtggcatt tgctacacac acgcctatag
     6361 attttacttt tgctttgatg atagtattag tagcggttat tggatcttta ggtattgctg
     6421 gagttcctgg aagtgcaact atggcagctt ctattatgct cgcaggaatt ggatttgggg
     6481 ataattttgt tatgcttagc cttattttag ctattgatcc tatcattgat atggcaagaa
     6541 cagccagtaa tgtttcaggg gctatgacct cagcgctttg cactgcaaaa aatttaaaag
     6601 ccatagataa agaaatttat aattcttaaa aagatttaaa cctaatatag gtttaaatct
     6661 ttattggcaa ccttcacatt ctatgctacg atcagcaata tttatctttt cgctatcagg
     6721 gctttcactt cttagataat aagtcgattt tactccaagc tcccaagcta attgatatat
     6781 atcatttaag taacccccgc ttgctttatc gagtgataaa aagatattta aactttgccc
     6841 ttgatctatc cattttccac gcactgctgc agctttaaca agaattcttt gatcaagttc
     6901 gtaagctggg gtataatatt gccaagtttc aagacttaaa ttaggcacta caacaggtat
     6961 cataccgctt aaattttgct caaaccactt acgcttataa acaggttcga tagtttgtgt
     7021 tgttcctacc aaaatagaaa ttgaagaagt aggagcaatg gccatcaaat aaccatttct
     7081 cataccatct tcttttactt tttccctaag cttatcccaa tcacattcgc tttgattaaa
     7141 caacccttct cttagggtta aagctttggc tttttcactt gctacatcaa taggaaaaat
     7201 ccccttactc caatttgatc cttcaaaatc agggtaagag cctttttcta tcgctaaatt
     7261 tgagcttgca ttaatagctt cgtagctaat tttttccata atttcatcaa ttttatttaa
     7321 atgctcatca ctaccccaat gaattcttgc ctcagcgagc atttgtgcct cacccataac
     7381 gccaagtcct atggcgcgag attttaaatt ggtatccttt acttttctat gagggtaaaa
     7441 gtttaaatca ataacattat caagcatacg aatagcagtt ggcaccacgc gttctatatc
     7501 ttctttagta tatactttgc taagatttat actggctaga ttacaaactg cagtttttcc
     7561 atcgcttttg tatttttcta cgatataaac cttgtttcca ttaaaactat caagcgttga
     7621 aattttctta gcaggttttt catatcctcc atcgataata acgcgttctt cttcatcaaa
     7681 atgtttttca tcaccatttt caaatacaac tttgatctta taataatttg gctctgtatt
     7741 ttgaaaaatt tctgtacata aatttgaact tctgataatc cctacatgcg catttggatt
     7801 ggctttattt gcattatctt taaagcataa aaaaggcaag cctgtttcaa aataattaag
     7861 caaaatcttt ttccaaagct ctttagcctc tactatttct ttagctatac tttcatcttt
     7921 ttcgtattct tcataacgct tttcaaaagc ttctccatat aaatcacaca aatcttgtgt
     7981 atctgcagga tcaaaaagag tccatttatc gtttgctctc actcttttca taaaaagatc
     8041 gttaatccac aaagcaggga aaagctcgtg tgcacggcgt ctttcttcgc ctgaattttt
     8101 acgcaaatcg ataaaatcac ttacatccat atgccaaggt tcgatataaa cagcgatcgc
     8161 accctttctt gtgccaagct gatctacagc cacagctata tcattggtga tttttaaaaa
     8221 aggaatgata cctcctgcgg catttttatg cccatctatg cttccaccca ttgcgcgaac
     8281 tttagaccaa tcccagccta tacctccacc aaatttagac aataatgcca tttcttggta
     8341 agaatcaaaa attccctcga tattgtcagg agttgagcct atataacaag agctaagctg
     8401 atggcgtgtt gttcttgcgt ttgataaagt aggagttgca agcatgagtt caaatttaga
     8461 gatgagatca taaaatttct ttgcccattc ttgaggatta aattcattct gtgctaaaaa
     8521 catagcaata gccataaaca tttgctgagg aagctctata ggcataccct tgctatcttt
     8581 aatcaaatat ctatcatata gagttttaat gccaagataa gtaaattgca tatcgcgttc
     8641 aggcttaata taatcattta aatcatctaa atcatatttt tctttaagcc caagtaaaat
     8701 tctaccttcc ttttcgccct tttcaaaata ctcacgcaaa tgattatagc gattcattcc
     8761 attcactttt ttatacaagt caaacaaaaa aagtctagct gcgacaaagg tccagtttgg
     8821 acaatcaata tcgattttat ctacagcagt tttaatcaat gttttttgaa tttcttcagt
     8881 tgaaattcca tctcgaaatt gaattttagc atcaagctcg agctcgctta gattaacgcc
     8941 ttctaaatct tttatagcat caaaggtgca ttttttgatc ttagaaacgt ctaattcttc
     9001 tgtgcgacca tttcttttaa taactttcat tgtattcctt gtccttattt aaaagttctt
     9061 gcaaagattg catcaacatt ttttgtgtaa taattataat caaaacattt tcttatatcc
     9121 tcttcactca agctttttct caaatcctca tcagctaaaa gtgcaagtaa aaataagctt
     9181 tcattttttt cattgatagc agctttgcca ttttgcaaat cagcccaaac tttcatcgca
     9241 tttctttgga ctattttata agcttcttca cggctaatgc ccttaaatgg aagctctaat
     9301 aaaacgcgtt gtgaaaatac gagtccacct gtaagattta aatttttcat catattttca
     9361 ggataaacca aaagcttatc gatcaaattt gtaagacgca tgagcataaa atcagctgta
     9421 acaaaggcat caggcaagat aaatctttca acacttgaat gcgatatatc tctttcgtgc
     9481 cataaagcta cattttctaa agcaggagtt acaaaggatc taagcacacg gcaaagccct
     9541 gtgatatttt cacttaaaac cggatttctt ttatgtggca tagccgaact tcctttttgc
     9601 cccacgctaa aatactcttc agcctcatat acttctgttc tttgaaaatg tcttattgca
     9661 acagcaattt gctcgcacga tgaagccaaa atcgcaatgg ctgaaatcac ttgtgcgtaa
     9721 cgatctcttt gaataacttg atttgaaaca ggtgcaggtt taaggtctaa atttttacat
     9781 acttcttctt caaattctaa aggagcatga gcaaaatttc ccattgcacc actaattttt
     9841 ccataactta tcacttctct tgcatgctct aaaagctctt ttgcatgtaa aatttcatca
     9901 taccaaatag ctaacactaa accaaaagtg ataggttctc catgaattcc gtgacttcta
     9961 cctaccatta aagtattttt atgttccaaa gcgcgttttt taatcacttc taaaagcaaa
    10021 gaaacatctt ctaaaatcaa atccaaactt tctttcatct gtaaagctac agcggtgtcg
    10081 atacaatcag aacttgtcat cgcataatgt acaaagcggc tttcctctcc taaactttca
    10141 cttacacttg taagaaaagc aatcacatca tgcttggtag ttttttctat ctcatcaatt
    10201 ctagctatat caaatttagc atttttaaga attttttcac aatctgtatc atttataagg
    10261 cctagtttat tccaagcttt tacagcagct agctctactt ttagccatgc atcatatttt
    10321 gcttgcatat cccatttttt ggccatgatt tctctgctat atctttcaac catctttgaa
    10381 acctttttag ctataatttt tttaaaaatg aaaatggaat tttatctaaa aaaatttaga
    10441 gaaaggttaa gtttggctta cacaaaaata aaactatcaa acaatggaaa aaaggcgttt
    10501 caagtcctta tagataattt gaaaatcaat ataaatgaag cccaaaaact catagacaaa
    10561 aaaagacttt tttgtgatgg aattttagta gaagaaaaaa ataaaatctt aaaaggcgat
    10621 gtagaattaa tagtctatga aaacaatccc aagggagtag aaattgtttt tgaaaatgaa
    10681 gattttgcgg tacttgaaaa agaaagtgga attttaagtc atcctaatgg cagacactgc
    10741 aaatacagcc ttagtgatga aatttggcac ctttggggta aaaaagcgtg cgtagcccat
    10801 aggcttgata aagaaacaag tggactcata ctcgtagcca aacacaaaaa agcacaaatt
    10861 gaacttaaaa ctatgtttga aaaaaaacaa attcaaaaag aataccttgc ccttgcaagt
    10921 ggagaaatta aagtaaattt tatagtcgat caagcgatgg atttaacaaa agattatgat
    10981 gatgttaaaa ctagaatgca aatttgtgaa aatggaaaaa aagcaatcac agagtttgag
    11041 gttttgagct tttatcctaa gctcaatgct acacttttgc tttgcaaacc actcacaggc
    11101 agacaacacc aaattagagt gcatttattt tataaaaacc ataaaatttt aggcgatcca
    11161 ctctatggcc ttgaaaaaaa agatatagaa aaaattttag atgacaaaat ggacatagaa
    11221 gaacgcataa aactaagcgg tgctaaacgc ttgtgtttgc attcttatcg tttaaaattt
    11281 aactataacg gagaaaattt tgatattttt tcaaaaaagg gtatggaaaa aattttagca
    11341 gcattttaaa ataaaggcga tacttcatat ctaacaagct atcattttta ataaaaattt
    11401 ttaaaataaa aatttacttt ttgttaaaaa tttagtataa tcaaaaaata aaaatatagg
    11461 attttataaa tgaaatttgt taattttaaa tttaatcaaa aagctactct aggggtgttt
    11521 aactcaagtg gaaaggtcgt aaatttagcc gatcttgata tcaatgttcg tgatatgaat
    11581 gaattgatta taaattttga tgaatttaaa cataagttta aagatttaga ctctaaaaca
    11641 gcttatgaaa ttccaaaaga agattatcta gctcctatca tagaacctcg acaagatatc
    11701 atatgtcttg ggatcaattt tttagatcat gccaaagaat ctgcacaatt taaaggcgaa
    11761 aaatttgaag aaagagaata tcctgtatat tttggaaaac gctgcaatca agccacagct
    11821 ccttttggca gcatatcttt acatgctgat gttacttctc aattagacta tgaatgcgag
    11881 cttgctttca ttttaagtaa agatgcttat aaaatcaaag ctgaagatgc aaaggattat
    11941 atttttggtt ataccatcat caatgaaatt tcagcacgag atctccaaaa acgccacaag
    12001 caattttacc gcgcaaaaag ccttgaggga agtactatca tggggcctta tatcacaagt
    12061 gttgatgaga ttgcttatcc acctgaactt catttgaaaa gttatgtcaa taaagaatta
    12121 cgacaaaact ccaatacaaa attttttatt tttgacatcg gatatgtctt agaggaacta
    12181 agctcaggaa tgctcttaaa agccggtacc atcatatcaa tgggaacccc aagcggtgta
    12241 ggaatgggtt taaatccgcc cgtttttctt aaaaaaggtg atgaaatacg ctgtgtaata
    12301 gaaaatttag gagaaatttg taatataata tcataaactc ttattaaaac aatttttaat
    12361 aagttcaatc aaaaggagaa attatggagt tcttagagct tttattagtt ttaatcgcct
    12421 tgatactgat tatcaaaaaa ccagaaaaag aaaatttggc ttttggtttg gtaatggtag
    12481 cttggctttt aatggttttt ttctatgttg gccacaaaac aggtgcgctt ttaacgataa
    12541 tgaatctgta aagaaaggct agagaatgaa cgaaataaat aaaacaaaaa atttctacac
    12601 tcttatgtgt ttagcaggct ttttgattat tcttttgcct gtagggattg caaattttgt
    12661 atttggttat atgttgggtg atagcccatg cactctttgt tggggacaaa gagaagcgat
    12721 gatttttatc ggagttatag cactttttat cgtgcgttat ggtatgaaag gcaaatacct
    12781 tgccgctctt ttaatcatga ctgcagtagg tctttatcag tcttttgcac attatggcaa
    12841 tcacgctcat agagatttag atcaaggttt tggtttggca gtttttggta tccatactta
    12901 tttttgggct gaagtagtct tttgggctgt agtcttgctt ttgggtgtga tgtttgcttt
    12961 tgctcctaaa tttggatctt ttgacaaaga attaaacggt gaaaaattta gaaaatttac
    13021 taaatttagc ttcgcagcag ttttaatcag cacccttatc gttgcatcaa atgtttttca
    13081 agcttttgta agcacaggaa ttcctcctta tgtaggacaa ggtgatccag taagatttag
    13141 tcttaatcca aaatatatca tttggagcac agagggttgg aatggtttat ggcaaaatat
    13201 ttctttctta ggaaagcgtg atgttaaagc tcctgattat gcttttgcac ctgcgagtga
    13261 aaaattgggt ataaaatttg ataataatac aaataattct ccatttgcag aaattgacga
    13321 tgagcttaaa attatcaatg aacaaaccat aaattttgat aaagcaatca atactcttga
    13381 ttatattaat gatgaatttg tagcaagttc taaatgggat gtggctttct tagataataa
    13441 ttttagcgtt aaagaaggtt ttgagcttga tccttatttt tcagctacta tcgatcctat
    13501 cataggtatc attccttata aagaaaataa atttcttctc atgggatcta ataaatcttt
    13561 cctaagattt gccaaaaatc caaatgcgga cgaaacttta caatatgcag attttattaa
    13621 aggaaatgat aaatttgaag gtcaaggcga aagtttaggt cgtggaagac ttgatacagt
    13681 tagagcaaaa ttcaaccatg tagcaagtat gacaacagat gatcattatc tttatcttgc
    13741 aactgttcca aacaacaaag acgctaaaac ttttgtaatc tctaaagttt ctttaaaaga
    13801 tcgtgttctt tcaggagaat ttactccaaa agcaaatctt aaagaaggta aaactttagg
    13861 cgatctttat gtaacttcta tgacttttaa agatggggaa atttatgcac ttagcaaaaa
    13921 tcacaatgtg attgccgtaa ttgatccagt caaagaagaa gtagtgaaaa ctatcgcttt
    13981 cccaagctct atcactaatg ctagaagcat tttctttaaa gatggaaaaa tcaatattct
    14041 ttcttatcaa gatggagcaa acaagcttta tactttaaac taagctttaa gtcctagtga
    14101 aaactaggac ttatatttaa tcttatcttt aaatcctgct ttttcaaaac ctcttaaacg
    14161 aagcaaacaa ctatcgcact ccccacaagc ttcatcttcg ctttcataac aagaccaagt
    14221 aagctctaaa ggtacatttt cttttaaggc tagttctaca attttagctt tgtttagtct
    14281 aacaagcgga gtttttatac aaactttgaa attcttactc gtaccttcat tgataaattc
    14341 ttgtgccttt tgtataaact catcagtaca gtcaggataa ccactgccat cttcttctac
    14401 cacccctata aaaatactct cacaattttc cttttcagcc aaagatcctg ctatacttaa
    14461 gaaaattcca ttgcgaaaag gcacataagt gataggtgga gtatcgcttg tacaaagctc
    14521 atttttaggg atgtctatac ttttatcggt taaggcattg ccccctatat ccttgataaa
    14581 actcacatct aaaatataag atttttctac ttttaaagcc ttgcaaattt gcttaaaaca
    14641 ttctttttct ttttcttgag tgcgttgttc atagtcaaaa tgcaaagcga tgatttcata
    14701 accttctttt ttggccagat aagcacacaa agtactatcc ataccgccac ttatgataca
    14761 aagtgctttt ttactcattt ttatccttaa atttgctata atttcacaat tttaacgaaa
    14821 atttttaaat ttaaattgca aaaaggcaaa agcatgataa acataaaact catagaacac
    14881 atttttaaag ccgcttctat cagtcgttgg aatgattatc caagaatggc aaatttggtt
    14941 gaacttgaca aacaagctca taaattcatc atcgcatatt ttatcgctaa aatggaaaaa
    15001 gatgtggata tgagagtgat tatagaagga ggaatttttg agtttttaag tcgtgttgtg
    15061 gtaactgata tacgccctga tgtgtatcat gaaatcgtgc gtcaaaaaaa agctgaagtt
    15121 aatgcttggg ttttaagcaa aatcgaacct atgatagaag atatagaaga tggggaattt
    15181 ctaaagcgtt ttgaagcgta tttaaatggt aatgcttatg ctaaagaaag acttatctta
    15241 aaagcagctt catattttgc tacaagatgg gaatttaaca tagtttatca aacctcagct
    15301 tttttaaatg atattgatga aattaaaaac aaagttgaag aagaattaga agattactat
    15361 gagcttatag gagctagaaa aatcgctctt aatcaaaaaa tcgcaaaaat aattgattta
    15421 agcggaagac ttcgttttca aaagcgttgg gctcaaaccc cgcgcatacc tgaaactgct
    15481 gttttaggac atatgcttgt agtggcgatt ttaggatatt tttattcact taaaatcaaa
    15541 gcttgcgata aaagacttga aaacaatttt tattgcgctt tatttcatga tttacctgaa
    15601 tctttaacgc gtgatatcat aagccctgta aaatacggca tagacggact tcacactatc
    15661 atcaatgatt atgaaatgaa actgatcaat gatagaattt taccctttgt gcctgaaaac
    15721 ctaagggctg aattttctta tatcttaggc attagagagg gcagaagcaa tgaagcaagt
    15781 tttgtcaaaa atgaatttga aaatcgcacc tataaaaatg ctaaaataga gctttgtagc
    15841 ggaagtttaa gctcttttaa tcaaaacgaa tttggagcaa ttgatggcaa ggctttaaaa
    15901 tactgcgata aaatcgctgc ttttatcgaa gcagggctta gcataagcta tggagtaaag
    15961 tctaaagaac ttgaaaacgg ttttgaagat atgtttagat ttttcaacga aagccctaca
    16021 atcgatggag taaatttcct cgaaatttgt agagaattta gggattattt taaaatttaa
    16081 tcttattttg attataaact ccaagaacgg aatgaaagaa actctttcat tccatatcta
    16141 aaaccgcacc cttgctagca tttgttacaa gtttttgata cattctaagc catctggatt
    16201 ttacttcttt ttgaggcatt acaaagtcat ttttgcgttt tgcgatttct tcatcgctta
    16261 aatttgcatt gatgatataa gcatctacat cgatttctat ctcatcacca tcttttaaaa
    16321 gccctataag tccaccctca gcagcttcag gagaaacatg acctatgctt aaaccccttg
    16381 ttgcaccgct aaatcttcca tcggtaatca aagccacatc tgcaccaagc cccataccca
    16441 tgataagtga agttggactt aacatctctt gcatacctgg gccacccttt ggcccttcat
    16501 aacggatcac gcaaacatcg cctttttgca ctttaccttt aatgatacct ttaatagctt
    16561 catcttgcga attaaaacaa acagccttgc ccttgaattt tctctctcct gtaatgcctg
    16621 cagtttttac aacacagcct tgttcggcta aatttccaaa taaaaccgca agccccccta
    16681 ctttagagta agcattatct accttacgaa tgatggtttc atctttgatt ttagcatttt
    16741 ttaaacgatc ttgtaaactt tctcctgtga tggttaaggc atcaagctct aaaatatgtc
    16801 cttctctgct tgaaatttca gccattacag cacttacacc ccctgcttta tggatatcat
    16861 ccatataaac agtattaagt gatggagcga tttttgcaat atgtgcaacc ttgcttgaaa
    16921 taaaatttaa atccttgata tcaagcgcaa ctcccgcttc tcttgaaata gctagcatat
    16981 gtaagattgt atttgtgctt ccacccattg ccatatctac caccatagca tttcttatag
    17041 ctttttgggt gataatattt ttgattttaa atctttcatc taaagcgatt tcacaaattc
    17101 ttcttgcagc ctttcttaaa agctcttctc tttctttact aagtgctaag atcgtaccat
    17161 ttccttctaa agctataccc atagcttcac ataaagtatt catagaattt gcagtaaaca
    17221 tacccgagca agagcctcca cttgggcaag ccgaacattc tatatcttta aattcttctt
    17281 cgctgatttt attggcctca tatgctccta cagcttcaaa aactgaacta agacttattt
    17341 tttcaccctt tttagtcaca cccgaacgca taggaccacc gcttacaaaa atagtcggta
    17401 cattaaccct taaagcaccc attagcatac ctggagtgat tttatcacaa tttggaatac
    17461 aaattaaagc atctaactga tgcgcattca taacgctttc aactgaattt gcaatgattt
    17521 cacgactcgg caaagaataa agcataccct catgacccat agctatgcca tcatccacgc
    17581 ctatagtgtt aaattcaaaa gggatacagc cattttttcg aatttcatct tttataattt
    17641 ttgcatattc atttaaaaaa taatgccctg gaataatatc aatatagcta tttgccacac
    17701 ctataaaagg cttgtcaaaa tcctcatctt ttaagccaca tgctctaagt aaagagcggt
    17761 tgggtgcttt taaatgccct tttttaatcg catcacttct cactaaaaac tccttaatat
    17821 ttttttaata ttataactta atttttataa aatttacttg caagaagtaa gctttctgtg
    17881 tataattttc atcaattgac aaaagtattt ttttataata caatgctttt tgattatcaa
    17941 aaaggagtac aaaatgagac aatatgaatc ctataaatgt ccaaaatgcg gcaatgaagt
    18001 agaagttcaa aatgtaggcg gtggaaaact tagctgttgt ggtgttgaga tggagtgtat
    18061 cactcaagat ttaactgcaa taaatttgat gaaagctttt gctggagaat caatggctag
    18121 aaataaatac gatttatttg cggatgtagc tgaagaagaa ggatggcatg cggttgcaag
    18181 acattttaga gaagcagcag aaaatgaaaa atggcatgca agagctgaat ttaaagctta
    18241 tcacgaaatc gttgatggca aacctttaga agtaactaca aaaaacctag taactgctgc
    18301 agaaggtgaa aactatgagc acacaactat gtatccaaat tttgctaaaa tcgctgaaga
    18361 tgagggtaaa aaagctatag caagattatt tactgcgatt ggaaaagtag aaatagaaca
    18421 cgaaagagaa tacctagctc ttaaaaaaat gcttgaagaa gaagaattct ttaatagcga
    18481 agtagaagaa ctatgggttt gtgaggtttg tggacatatc catcgtggca aaaaagctcc
    18541 tgcagcctgt cctttatgta aagcacctaa agaatacttt aagcgtgaat ttttaggcta
    18601 aatccttggg cgatttttcg ccctttctta gagaaaattt gaaaacttta tttgaagaaa
    18661 acgaactttt aactccattt gatattaact taatcggcat tgatgaagca ggacgaggtg
    18721 ccttagcagg tcctatgatg atggcagctt gtaaactgca taaagatctt gaggggcttt
    18781 gtgattctaa aaaattgagc gaaaaaagac gcgaagaact ttatgaaatt atcatcaaaa
    18841 attcaaatta tctcatactt gctttttctt caaaaaaaat tgatgaaata gggcttagcg
    18901 cttgtttaaa aatgggttta acactcataa aaaaacactt taaaacagaa aataatttct
    18961 tatacgatgg caatacaaat ttaggcatta gcggtataaa aactcaaatc aaagctgatg
    19021 ccaatatcaa acaagtaagt gcagcaagca tacttgcaaa ggtgagcaaa gatagggtaa
    19081 tgaatttttt agctaaagat tttccttgct atgagtttga aaaaaacaag gcttatggga
    19141 caaaagccca taaggaattg atagcaaaat ttggaatttg caagcttcat cgcaaaagtt
    19201 ttaaactttt atgactattt tgctaaattc tcatgtatat ttaaagcaca ctctataccg
    19261 tcttttatag cccaaacgac taaagattgt ccttttctag catctccaca agcaaagatt
    19321 ttttcatgtg tggtttggaa attctttgtt ttgacattgt ttttctcatc caaacttact
    19381 ccaaaattac tagcgatagc atcttcactt ccgctaaaac ccatagccaa aagtactaaa
    19441 tctgctttat agttttgatt agaatttgga agttcgacat ttatagcctt accttctttg
    19501 aattcgcgtt ttaaatcaca tgcttctacg ctttctactt tgtctttacc taagaatttt
    19561 tttgtcattt tttgatattc tctaggatct ttgccatata cagcaatggc ttcttctaaa
    19621 ccataatctg tcgtaaagat atcagctttt aaaggccaag gattgctttg gcttctttgt
    19681 aaaggtcttt ttgggcttct ttcaaaacgc actatggact tagctccttg tcttgtagct
    19741 acagcgatac aatcaacact tgtgtcccca cttcctataa ccaagacatt tttacccttt
    19801 gctgtatcag cacccttacc tgtttttagc aaggttttgg tattttgcgt taagaaatca
    19861 agagcaaatt caacgccctt tagttttcta ccctctatat caagatcgat aggcttgctc
    19921 gctcctgtgc aaagtactaa agcatcaaat tcttttaaaa gtttagaaac cttatctttg
    19981 ctgtctatat tttcatttac cttaaattct ataccgcttt ctttgagtaa atcaacgcgt
    20041 ctatcgacta tacttttatc aagcttcata tcaggaattc catacattaa aagcccgcct
    20101 actttatcgc ttctttcaaa aacacttacc ttgtagccaa gtgaatttaa ggtattagca
    20161 caagcaagtc cagcaggccc acttcctatg acggcgattt ttttgccatt gtattgttta
    20221 ggtttatttg gacttactaa attttcttta aaagcatttt ctatgatggc tagctcgtta
    20281 tttttgatac ttacgctttt tccattaatc gcacacacac aagaatcctc acaaggagcc
    20341 ggacaaacac ggccagtaaa ttcaggaaaa ggattggtaa gatcaagtct ttcataagct
    20401 tctttccata aagaacgata aataagatca ttccattcag ggataagatt gtttaaagga
    20461 cagcctacat ccttgccttc actcatcaca cccgtatggc aaaatgctac cccacaatcc
    20521 atacatcgtc cgccctgaat ttcttgttct ttcttgtcta aaagcgttgt aaattctttg
    20581 aaatttaaaa ctctttcttt aggagcaact tttttaaaat ctaccctttt aaaatctaaa
    20641 aaacctcttg catttcccat ttttactcct tatttttgtg tgattttcaa aaatgctgcc
    20701 aaacttggat cttcttcatc tttgcaaagc tcgatcatct ctaacatttt ttcataatct
    20761 cttggcataa ctttaaaaaa gtcttttttg tcaaattttt cgagtatgtc cttagccttt
    20821 ttagaattgg tataagcgat atgattttct atcatcgttt ttaattcttt ttcatcctta
    20881 gtgctaagat ctttaatatc cacaagctcg gtatttacat gggcttcatt gtgtcttcca
    20941 aagatataaa ccacaccccc actcatacct gcagcgaaat tcgcacccac atctccaaga
    21001 actacaactt gcccacctgt catatattca caaccatgca cgcctgttcc taaaaccaca
    21061 gctaaagctc ctgaatttct tacacaaaat ctttcccctg ctataccatc taaatacact
    21121 tcaccttttg tagctccgta taaacaagca tttcctgcga tgatattttc ttcaggtgaa
    21181 aaagtggctt catttgaaat ttttgctatg attttgccac cacttaaacc cttgcctaaa
    21241 taatcattgc tatcgcctat aatctcaagt ttaatgccct ttaacaaaaa cgctccaaag
    21301 ctattgcctg catttcctat ggctttaatt tgtatgctat cttcgcttaa agcgtctttg
    21361 ccataagttt ttagaatttc acttgaaagc atagtagcaa aagtacggct ttgatttcct
    21421 acctctaaag aaagtttgat aggctctttt ttctccacag catttttaca aagtgggagt
    21481 aaaattctat aatcaatcgt tttttcaagc ttattgtctt tgtaatcttt aaaatgcaca
    21541 gcggttctgt tataagtagg taaggatttt aaaattttat ctaaattcac tttacctgct
    21601 ttaccttgca taggtttttg acggagttta tcaactcttc ctatcatatc atcaaggcgt
    21661 tcaaaaccaa gtcttgccat atattctcta agctcttcag ctataaaata catgaaatta
    21721 accacatcat ctactttgcc tttaaaacga tctctaagtt ctttatcttg agtggcaata
    21781 ccaaaaggac aagtattaag atgacaaact ctcatcatcg tacagcccat aacaatcaaa
    21841 ggcgcagtag caaagccaaa ttcttcagct cctaaaagtg cagctatagc taaatcgcgt
    21901 ccattcatca gctttccatc agtttctaat cttactctat ctctaagctt gtttaagatc
    21961 aaagtttgat gcgtttcagc taagcctaac tcccaaggaa ttcccgcatg cggtatagaa
    22021 gttctagggc ttgctcctgt tcctccatca taacctgaaa caaggattaa attcgctcct
    22081 gcttttgcca cacctgcagc aactgttcct ataccatttt cgcttacaag ttttactgaa
    22141 attttggcgt ctttattcgc attttttaaa tcataaatga gttgagccaa atcttctata
    22201 gaataaatat catgatgagg tggtggagaa atcagcgtca cacccgctgt agaatgtcta
    22261 gccttagcta tccaaggata aactttaaag cccattaatt gtccgccctc gcctggtttt
    22321 gcaccttgag cgactttgat ttgtaattct tttgcatggc ttaagtagtt taaatccacc
    22381 ccaaaacgcc cacttgctac ttgtttgata gcggaatttt tattgactcc atctttgatt
    22441 tcatagcgtt cctcatcttc accgccctcg cctgaatttg atttagcacc tattttattc
    22501 atagcctgtg ctaaacactc gtgtgcttct ttagaaatag aaccataact catcgcccct
    22561 gttctaaagc gtttaactat actttctaca ctttcaacct tatctatact gatagcttca
    22621 ctaaaatcaa attccatcaa agaacgcaaa ttcacttgtt tttcatctac taaagccgag
    22681 tattttttaa agcttttata gtctttattg cgacaagctt gctgaagatt aaaaatcaca
    22741 agtggatcga ttaagtgttc ttctttagca cttctaaaac catgaattcc tttagaatct
    22801 aaagccttat gcgtatcgtt aaaagcatgt ttatgtaaag caatgagctc tttttcaaaa
    22861 tcttctaaat ccataccttc aatgcgtgaa gttgtagaag taaagtattt atcaatcacc
    22921 ttagagctta agcccaaaca ctcaaaaaga gcagaaccat tataactttg taaagtagaa
    22981 actcccattt tagaagcaat ttttactata ccacttgaac ttgctttgat gaaattttct
    23041 accgcctttt cataacttaa atttaaatct ttattggcaa tgagtttttg tatactctca
    23101 taaaccaaat aaggattaat aacagtcgca ccataaccta aaagacatgc aaaatgatga
    23161 atttctctag gttcaccact ttcgatgata agacttgtat gtgttcttaa attttttctt
    23221 actagatgat tatgcactcc agaaacagca agcaaagcag ggatataagc atttttttca
    23281 tccactcctt gatcgcttaa aatgataata gaaacacctt ttttaacctc atcttctatc
    23341 ttaacgcaaa gttcatctaa agccttttct aaagtttttt tagaataatc ataaagtata
    23401 gaaaattctt taacttggaa attgtttaag gctttaacct cgaaaagctc ttcattgcta
    23461 ataataggca aagaaatttt aacacgcttt gcattatttt catctggttt tagcaaattc
    23521 ccttcgcttc ctaaatatat ccttgtagaa gtaacaatct cttctcttat agcatctaaa
    23581 ggtggattag tcacttgagc aaaaagttgt ttaaaataat tatacaaagg ctgataagtc
    23641 ttagaaagaa tagccaaagg agtatccaca cccatagccg ctaaagcttc tttgccattt
    23701 tgtgccatac ttgctacact cattttaagc tcatcatagc tccatccaaa agctttttga
    23761 agttttaaaa cctcatcttc ttttaaaaat ttatgtttat aaaccccgct gtgttgtttt
    23821 tcaagctcta ctaaattttt aagccattgt ttataaggct tcgcattagc ataatgctct
    23881 ttgatttcat tatcagctat tactctacct cttgcagtat ctacaagtaa aagttttcca
    23941 ggttctaggc gttttttagc tttgatattg ttttcatcaa gttttaaagc tcctgtttcg
    24001 cttgaaagta tgagcatatc atcttttgta agataatatc ttgaaggacg aaaaccattt
    24061 ctatctaaac tcgcccccat gataacccca tcagtaaaaa ctatagcagc aggtccatcc
    24121 caaggctcca tcaataaaga atgatactca taaaaagcac gctttttact tcccatgttc
    24181 tcatttttat gccatggttc tggcaccatc atcataaaag cttcttctaa agtgcgtcca
    24241 tttaaagcta aaaattctaa agtattatca aacatagcag aatcactact tggttttgct
    24301 atgataggaa aaatttcatc taaattttca aaatattcgc tctccatcaa accttctcta
    24361 gctcttatgc tatcgacatt tcctcgtata gtgttaatct ctccattatg caccatatag
    24421 cggtttggat gagctctttc ccagcttggg aaggtattag tcgaaaaacg agaatgcacc
    24481 aaagcaatgg ctgatttcat attgacatct ttaaaatcaa gataaaaatc actcaattga
    24541 gtagaaagaa gcattccttt ataaactata gtgcgtgaag aaaagcttga aaaataaaat
    24601 ttaggcacat taatagctct tttttctata agacgacgac aagcataaag tactctttca
    24661 aattcaagtc ctgcattaac cgtgcttggt ttttttacaa aagcttgtaa aaaataaggc
    24721 atagctttta aagcgcttgc tcctatatcg ctaggattaa aaggcacttc tctaaaacct
    24781 aaaaattcta aatttttatc ttttaaacct tgtaaaaata tcgcttttgc ttcttcttta
    24841 gcatctgcat taggcgataa aaacatttgc gctacagcat aatcaccttt ttgaggaagc
    24901 tcaaaaccaa gctcttgagt catgaaaaaa tcatgaggaa tttgaatcaa aattcccgct
    24961 ccatcacctg aattttcttc agctcccgca ccgcctcggt gttcaagatt catcaaaatt
    25021 tctaaagcgt cacaaataac cttataagaa gcaataccgc gtatattggc aactgcggca
    25081 ataccacagg catcgtgttc atttttaggg tgatataaac ctacgctttg attgttttct
    25141 aagatatttt ccaaatccat tttattctcc ttataagatt gattttaaat ttgatagctt
    25201 gttaaggatt ataacatata tttttttaat atcgagatat tttttatctt aaaaataaat
    25261 aaattaaaaa atatttcaat ggatttataa aaattataaa aacatcgcta tgatacttcc
    25321 taaaatcagc aaaggcccat tataaaaaat aaaagtagga atacaagtat cttttatatg
    25381 atcgtgttgc ttatctacac ttaatcccac actcgttccc atcgtcgttt cacttgctgg
    25441 acttcctgca tctcctaagg cccctgctac tcctaagata aatataataa gtgctgcgct
    25501 aaaaccaagt tctaaacaaa gcggacaaaa aagtgtagct atgataggaa tagtcccaaa
    25561 agaagtacct atacccatgg taataataag acctattaaa agcattaaaa ataccgctaa
    25621 aaatttattt tcttgcatcc aaggcactac ggaatttaca agctcattta cagcaccgct
    25681 ttgttttaaa acttctccat aacccgctgc tacaagcata acaaaagcga taaagcccat
    25741 taatttaagt ccatcatcaa aaatatcatt gacactttta tattcaactc cgcccaaaat
    25801 caccatagaa ataaagccca aaagccctga taaaggtaaa ttcatcgtaa aaatttgtaa
    25861 aaccaaagtc aaaataagcc ctactaaaac gccccattct ttgcgtccca ttttgatatt
    25921 atcaaaatcg attttttgaa tttctatttc ttgatattct cttggttttc tataaaatac
    25981 aaaaagcgct aaaaaaagcc ctaacaccat acaaatagca gcataataca tcgcatttgt
    26041 tacatctgct aagttgacat taaccccatt tttttccaaa ttttctctta aaagatcttg
    26101 gaagttaagt ccaaaaccta taggcaaaac catataaggt gtcgtaagtc caaaggttaa
    26161 agcacaagca acagccctac gatcgatttt taatttatta aaaagactta gaagtggtgg
    26221 gattagcaaa ggaataaacg ccacatgaat aggaattaaa ttctgcgaaa aacaagaaat
    26281 caaagctatg gacaaaagta aaagatattt tttatgagag ataaaacgac tgactacctt
    26341 aatcaaataa gctgttaaat ttgtccttga aatcgcagca gcaatagcac ctaaaagtat
    26401 ataacttaaa gcggttttta aatttccctt cattccgtcg attaaaatac tcatagtttc
    26461 cataatctca atatgagaaa aaattccagc aactaaagca gaaatcaaaa gactcaaaag
    26521 tacattaaaa cgaaataaac aaagtaaagt catcaaaact acactgatga tgataggatt
    26581 tgtaagcagg gtcaaaattt ttccttgtga atttataaaa gcttaattct aaagaaaaat
    26641 tttttaaaat gaga
//
LOCUS       DAQUWA010000016        26142 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.016, whole genome shotgun sequence.
ACCESSION   DAQUWA010000016 DAQUWA010000000
VERSION     DAQUWA010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26142
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.016"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(146..1000)
                     /locus_tag="R8X70_000588"
     CDS             complement(146..1000)
                     /locus_tag="R8X70_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEF2928392.1"
                     /translation="MKVGIVGLGKMGQNHLNELSKNKNFKINALFDMVENKNLNAPFF
                     INLDEFLNQDNDIIIIATPTNSHLEIARKVFCKCKCVLIEKPLALNLNEINEISNLAK
                     DHNVKVGVGFCERFNPAVLALKKELQNEEIISINIQRFSTYPQRISDVGILQDLAVHD
                     LDLLHFLSAEKITNANILKSFNKDNQREDESIITCKLEKTIACVHQSWNSTQKLRKIT
                     LVSKNHFYEANLADFSLSKDGQNLELMTQTPLFGEHMALYDLFLNKENYLANIQNAYA
                     VQEILEKF"
     gene            complement(997..2109)
                     /locus_tag="R8X70_000589"
     CDS             complement(997..2109)
                     /locus_tag="R8X70_000589"
                     /inference="COORDINATES: protein motif:HMM:NF005085.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEF2928393.1"
                     /translation="MKLDQVGSFLRPKILKEARENFALGKIDEEQLRSIEDSCIRDLL
                     EECDKAGIYYLSDGELRRSWWHLDFYWGFGGIKKIKKEKGYIFKGIETRAEGIEIESK
                     IECNNHPFLKDFERLMQIAKGLKIDTNRLKLTIPSPSMLLYMLFIRGGKNTEFNYYGK
                     DFTKLKNDILNAYENFYKEFAALGGVYLQLDDTSFGSLCDYEFCALNEINTDDICEEY
                     VDFLNESLKTMPKNIMSAIHICRGNYRSRYVASGGYMKVAKKLFGELRVDKFFLEFDD
                     ERAGNFEPLKYINDQIAVLGILTSKTNESPSVEELKARVKIAAQFLNPKQIEISTQCG
                     FSSTEEGNEIFTHSQWEKIKLLKQVLSELENEGFFS"
     gene            complement(2106..3185)
                     /locus_tag="R8X70_000590"
     CDS             complement(2106..3185)
                     /locus_tag="R8X70_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEF2928394.1"
                     /translation="MNFINLQTQYLQYKEEIDSEIASVLSSSSFIGGAKLNEFEANLA
                     RYTHVQHAIGCSSGTSALYLALRALDIKQEDEVIVPSFTFIATAEMVALLGAKPVFVD
                     INLDNFNIDFELLKNAITPKTKAIIAVSMFGQMSNLQELNAFCESKNISLIEDGAQSF
                     GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCNDESIAKKLRILLNHGQTDRY
                     KHEFIGINARLDTLQAAILNVKLKHLDEEISKRQEIAKFYNENLTNCQIPKIDENAIS
                     AYAQYSVLVEDRARVLKAFEKANIPYAIHYPTPLHKQPCFSEFSHLKLEKSEFASKHI
                     LSLPFSAFLSQSEQESVIKVFKEGL"
     gene            3302..5830
                     /gene="alaS"
                     /locus_tag="R8X70_000591"
     CDS             3302..5830
                     /gene="alaS"
                     /locus_tag="R8X70_000591"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEF2928395.1"
                     /translation="MDVRSEYLNFFKSKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FIGEVPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEVLKLPKDRLYVTVHESDDEAFELWQKHIQKERIYRFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGEEYFNGEEDYMGGDGDRFLEIWNLVFMQYERSADGKLTPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIIDEIAKLCGKTYIYESGASFRVIADHIRS
                     SVFLLAQGTSFDKEGRGYVLRRILRRALRHGYLLGLKKPFMYNLVDVVCKLMGEHYTY
                     LNEKKDFIKEQICLEEERFLSTIENGIEIFNEELKNTKEVFSGEVAFKLYDTYGFPLD
                     LTQDMLREKNLVVDEAKFEELMNEQKNRAKASWKGSGDKVASGDFKNLLEKFGENCFV
                     GYEKTECQATVLALLDEDFKEVSSLKGLGWVMLDNTPFYATSGGQIADTGYIGTSEVL
                     DTQKFFNLNLSLVKANEEIKLNDKIIAKIDTDKREQTARHHSATHLLHHALREILGSH
                     ISQAGSLVESNKLRFDFTHHKALSKEELESIEKRVNEMIISSSEAILENMPLEDAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAV
                     VSRAALEFCKTFMNENLNLKEELKSNDLSLGVKKLKNEILKLKNELKNSNKSQLNSSN
                     INGVQICVECVESGDIKTMIDEFKNKFEKAAILLIQTKDDKITLAAGVKNCPLKAGNL
                     VKNIAQILGGNGGGRDDFATAGGKDISKIDEALKQALDLIQKGL"
     gene            5834..6385
                     /gene="maf"
                     /locus_tag="R8X70_000592"
     CDS             5834..6385
                     /gene="maf"
                     /locus_tag="R8X70_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEF2928396.1"
                     /translation="MLILASSSVSRSNLLKEAKIEFQQISFDYDENLDKNLKPSIYVQ
                     KIVLEKERQFCTTYEEKFKDETLLFADSIVCIGDKILTKANTKEEACEMLDLQDGKCA
                     SVLSAFLLKNLKKRVFSLSKTTLYFSKFDPRDLKDYVENGFYKGKAGAIMCEGFHKNY
                     IIKQEGNLNTALGLDTQNLKAYL"
     gene            6382..8313
                     /locus_tag="R8X70_000593"
     CDS             6382..8313
                     /locus_tag="R8X70_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEF2928397.1"
                     /translation="MKILKYIFSFFVVCLIAVFIYVAYLFANADTQGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYASYEELPPRLIEALVAIEDTSFFEHDGVNIDAIFRAI
                     VKIIRSGGKTMEGASTLTQQFIKNTELTPERTITRKIREALLAYKMETILSKEQILER
                     YLNYIFFGHGYYGVKTAAQGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIA
                     RANNVVARMYTLGWISKAEYDEAMKEIPQVYDDTLTQNAAPYVVDEVIKQLSPSIKDL
                     KTGGYKITLNIDLDVQEMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSTRQPGSSFKPFVYQAAINLGYSPMSEIADISRIFEGGAGD
                     NKDWKPKNDGGKFLGLITLKEALTRSRNLATINLALGMGLDVLHSKLVEFGFRDIPAN
                     LSIVLGSFGISPLEYSKFYTMFGNYGVIKEPQIIKQVQDRNDQIIMEFNSNEYRVSDE
                     AQSFLVLDMMRNVVEHGTGRNARVEGIEIAGKTGTTNKNIDAWFCGLTPEIEALIWYG
                     NDNNKPMRYTEGGARTSAPVFKEFLNKYLEKFPDTTRKFSIPNGVYRGSYKGQNAYYT
                     IKSPLPRTNMKFNESEILF"
     gene            complement(8356..10929)
                     /locus_tag="R8X70_000594"
     CDS             complement(8356..10929)
                     /locus_tag="R8X70_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEF2928398.1"
                     /translation="MANIQEFLTDNMLSNLESAASLAIHSKNNEVVPLHLLWALIVDS
                     SSILNQICNKFNISKEALELEIKSRISNLATSSNVNRENVRFSNEFINSLESAKGLMS
                     ANGDNYLSVDTWLISESEKNPIREILAKFIDIKEFQKELQNLRAGRKIESKTSDETLD
                     SLNKFGIDLTAKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKARKDIETLEVENEALKMENDEKNQKRLDEIAKELAN
                     LKEKQSALNSQFENEKAVFDSISAKKKEIDSLKNEAVFAKNKGEFQKAAELEYGKIPE
                     CEKEVANLEEKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGHEEGGELTEAVRRKPYSVLLFDEV
                     EKAHKDVFNILLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMNLSGKEQEDAV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQKSLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADKLNENDEIVIDAKNDEIVIEK
                     A"
     gene            complement(11064..11345)
                     /locus_tag="R8X70_000595"
     CDS             complement(11064..11345)
                     /locus_tag="R8X70_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HEF2928399.1"
                     /translation="MKHTHTHSPKHIKAISNRLSRTIGHLEAIKKMVERDEDCSDILI
                     QLAAVKAAVNNTAKAILKEHLAHCMYHAVMEKDTQSIEDLNKAIDMFVK"
     gene            11489..12826
                     /locus_tag="R8X70_000596"
     CDS             11489..12826
                     /locus_tag="R8X70_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEF2928400.1"
                     /translation="MLEFILSSKRFLAAITGFTGSLALCVFLASNLQAKPKNPSDLMQ
                     QRLESLDKLTKTLAIVEQYYVDDENITDLIDKSLSGLLSNLDAHSSFLNEKDFNDMKI
                     QTSGEFGGLGITVGMKDGALTVISPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
                     VDKMRGKPKTQITLTIFRKGATKPFDVTLTRDIIKVESVYAKLIEDENILYLRVTNFD
                     KNVVDMTSKELKKHPNVKGVILDLRNNPGGLLNQATGLVNLFVDKGVIVSQKGRVTSE
                     NQEYTANSKNKISDSSLVVLVNGGSASASEIVSGALQDLKRAIIVGENTFGKGSVQQI
                     IPINETEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFNIKESDLKQHL
                     ESELEKLDKNEKKEDKKEQKNDKNIITQKQINDDAQLKSAIDTIKILNIKQGQ"
     gene            12829..13539
                     /locus_tag="R8X70_000597"
     CDS             12829..13539
                     /locus_tag="R8X70_000597"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEF2928401.1"
                     /translation="MKKKELLYEGKGKKLYTTEDENFLISEFKDDLTAFNAEKKGSES
                     GKGALNCKISTELFHLLEKNGIKTHLVETISDNEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKNDELGDPFINDEHCLILNLVQNEAQIKEIKEMAKKIN
                     AILTPFFDAKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     DLGNVKMAYEEVLKRILN"
     gene            13548..13793
                     /gene="purS"
                     /locus_tag="R8X70_000598"
     CDS             13548..13793
                     /gene="purS"
                     /locus_tag="R8X70_000598"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEF2928402.1"
                     /translation="MKILVNVFLKNGVLDPQGKAIEKALHSLNFNEIKEARVAKQIVL
                     DLDESDEQKAKERVKSMCEELLVNSVIEDYELIVSEK"
     gene            13793..14437
                     /gene="purQ"
                     /locus_tag="R8X70_000599"
     CDS             13793..14437
                     /gene="purQ"
                     /locus_tag="R8X70_000599"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HEF2928403.1"
                     /translation="MKVAIIRFPGTNCEFDTQYAFEKLGVKAQIIWHEEKEIDADLVV
                     LPGGFSYGDYLRCAAIAKIAPAMQGVIAHAKRGGYILGICNGFQILLESGLLEGAMKH
                     NNNLSFISKNQNLRVVSNDNVFLKNFQKDEIINLPVAHGEGNYYADEATLKKMQDKDL
                     ILLKYEPNPNGSVLDIAGICDENKKIFGLMPHPERACDKILGNDIGLRMLEGFM"
     gene            14434..15633
                     /locus_tag="R8X70_000600"
     CDS             14434..15633
                     /locus_tag="R8X70_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEF2928404.1"
                     /translation="MRIIFFLVFVCLSLFARSEISVFDGQDENMQRELQKLPKEEQQI
                     YQNIAPSDENSDFDSNIYDPFIPQSSLVLTTDDYVNKVYVGEVFPIVLHAKITEDTNF
                     DFNITLQKSKDLIFLNPDLKWEYIKGDYRAVLWFEAKTSNANLEQISVSLLRNGKIFQ
                     SASISIGAIHFENTPNNKNFSHLVASSLEVKKIKTSYFDDSSIITMIELSATNANLKS
                     FFVNGVEKQGIENLKGDFNSSNAFYYAIFPSTKTDFEFSYFNKDTKKMENMSFKLKIS
                     DDEVSTQSDLNPTNRDFNIYKQYALWALTLILALWFVWKKNYFILAGALLCFILGFLV
                     DTNTENAILKAGSRAKILPTESSTYFYTANSNEKVEVLGKRLHYVKVLFRDDKIGWVE
                     SSDLQKN"
     gene            15614..16306
                     /locus_tag="R8X70_000601"
     CDS             15614..16306
                     /locus_tag="R8X70_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEF2928405.1"
                     /translation="MIYKKIKALYFWFFFIISVAFVVLCFCFIKSQDTLWKLRKSWAR
                     FQKNILFCKYEVIGEFDLKANMILMNHQSTLDIIALEDLYPKNLCWIAKKELGEIPLF
                     KIAIKKPKLLCIDRKNPRDLVRVLKEAKQRLSEDRVLAIFPEGTRSRNEKLLKFQSGA
                     KILSEKLDLKVQPILIVDSAKILDTKSFSASSGVLKIICMDLVDTSDKKWLENTRKKM
                     QELLDQERAKLC"
     gene            16300..16668
                     /gene="crcB"
                     /locus_tag="R8X70_000602"
     CDS             16300..16668
                     /gene="crcB"
                     /locus_tag="R8X70_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEF2928406.1"
                     /translation="MLNTILVVGLGGFIGAVLRMLSINLINKILPHSISFGTLFVNVL
                     GSFMMGLLFSYAHHKGLSPALKSFISTGFLGAFTTFSTFSYENLLLLQSGNYFNFSLN
                     ILLNIILCLIAVWLGFIIFK"
     gene            16741..18570
                     /gene="htpG"
                     /locus_tag="R8X70_000603"
     CDS             16741..18570
                     /gene="htpG"
                     /locus_tag="R8X70_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HEF2928407.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELVSNSSDALDKLNFLS
                     VSDDKYKSLKFEPRIDIKIDKDKKTLTISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWISDANGYEIEDATK
                     EEQGTSITLYLKDDEFANSYKIESIIEKYSNHIQFPIFMEKEEFIPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKTEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLYRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKGVKEASVKKILSELEKLKNKDKEKYLSFFKNFGKVLKEGLYGFGGEKDSL
                     LKLMLYKSTKGESLRSLEEYKNDIQGEQKEIFYITGNNESLLRNSPLLEEYKQKNIEV
                     LLMDDEIDSLVAPMLGEYEGLKFIAINQVEDKNELSDEEKNEFAPLVAKFKELLKDQV
                     EDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKN
                     NETFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIITKAFS"
     gene            18567..18887
                     /locus_tag="R8X70_000604"
     CDS             18567..18887
                     /locus_tag="R8X70_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEF2928408.1"
                     /translation="MITNLPASVWMKQDLSEYQIFDVRTPAEWEEGVLPHAECVALYD
                     NHGLLNANFLEEFQARRNENKKLAFICRGGHRSMMAANFIKNELGLESVNLDGGMLAL
                     KGLI"
     gene            18884..19318
                     /locus_tag="R8X70_000605"
     CDS             18884..19318
                     /locus_tag="R8X70_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928409.1"
                     /translation="MIGLYLLIAALSFLLLYFALKKLTLNIDEKALLEPIKSDIYPKF
                     CDIIDERIREFKDGVQNNSFTLKDQDKKDELLEKLGDLSRELTFIQTMNLSNKSDSVW
                     QSELFDFLKELEKLLLEYLENGEEEAENLRENLMNEFEKLRG"
     gene            19293..21101
                     /locus_tag="R8X70_000606"
     CDS             19293..21101
                     /locus_tag="R8X70_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HEF2928410.1"
                     /translation="MNLKSLEAKVQERKNFLKYLKMTFWGIFTLVLIFALIRFSELAN
                     LLAGVAVLLIGMTNLSLGFKSFSGGLLEKILTHSTNTKLKSILFGAISTLIMQSSTLV
                     SIISLSFLSAGLISLVAGVGIIFGANLGNTASSWLIVWLTRVNISILAIPLLVIGVLF
                     FFQKDNMIKSFGNIFIGIGFFFLGVDYIKNGFNEFQDVIDLSYFDFTGFKGVLIFVGL
                     GALLTGIIQSSTATIAIIVTALLTGQISFENSLAATLGTSVGGVVTAVLASLSTNVEG
                     KKLAFANCIFNFTIAIIIILIFPYFIDFLNGMAKILNIENLALKMALFHTLFNLLGIF
                     IFVLFIPQLVNFLNKIVKAPKDKNKDRPLYLEPSLLKFSDTAIEALRKESEHLYDNAY
                     AIIAHAIGLSRKDIQSNKSFEEILQNKKWFSKNVDLDYLYQTRIKVLFEAIIDFSTKA
                     QIHIDDELKNHRIFTFKIAAKNLTEATKNLKLVQENIKKYSNCGNKDLALEYNKIRSN
                     LGELLRSIQELRSVDDEKVYLIIKNFQKGKEILKEIDGLTLNNVEHLILVRKITTAEG
                     ISIINDTSFIAKIAKDLIDAVEIIFAREKVLWDDIN"
     gene            complement(21094..22899)
                     /locus_tag="R8X70_000607"
     CDS             complement(21094..22899)
                     /locus_tag="R8X70_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEF2928411.1"
                     /translation="MQEHKKNRVSKVAFAYCMALFFMIIFLSSTFFLTSKRHIPNTEK
                     DQYSLALRGNIITKDNFTITSSRQIYRAEIDLRSINKDKFDLFLKLFQIYSGISDDEI
                     ADIKKRIQKQKKRSYHFILSQNLDSKQASYLRDLAKKLYIQGFFKAFTNNLGKVETRG
                     LSIIEHEEDRIYMSKDALTPAIGYTKMVLDPQSGILKNVGVKGLEKYYDDCLSPLQNE
                     KIQGLKDIGGNIILNLNSLQQKKIDGCLLYLNISLKLQKSIEKAIDGRNEDLKANEII
                     VGVMDSKTGQILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKLKTDEVINTYGGAYKLGRFTIRDDHKMDQMTMEEVIRYSSNIGMIQIAKRLSNLEI
                     IAGLKIFKFGEKSGIDLPYEQKGEIPNSKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNNGVYITPHLAEKFYQDGRFVSLEEDIKKEVILTPQAAQTMQKILIDVIEKGTGKK
                     AITQGIIVGGKTGTARIAERQGYTSNRYNASFFGFANDTKHNYTIGVLVRNPTKPYSY
                     YAAQSALPMFKDVVDILINEDFLTPIITENNQTLN"
     gene            complement(22905..23204)
                     /gene="fliE"
                     /locus_tag="R8X70_000608"
     CDS             complement(22905..23204)
                     /gene="fliE"
                     /locus_tag="R8X70_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HEF2928412.1"
                     /translation="MNNINDLRLNNNISNANKSQNSNDKIGDEFAKMLKNEIEDLDKT
                     QKTAEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            complement(23211..23705)
                     /gene="flgC"
                     /locus_tag="R8X70_000609"
     CDS             complement(23211..23705)
                     /gene="flgC"
                     /locus_tag="R8X70_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HEF2928413.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAQGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
                     LLRG"
     gene            complement(23715..24146)
                     /gene="flgB"
                     /locus_tag="R8X70_000610"
     CDS             complement(23715..24146)
                     /gene="flgB"
                     /locus_tag="R8X70_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEF2928414.1"
                     /translation="MINPFKSKELITSALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNHANEIFKKNDNKELQLAITEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
     gene            complement(24222..25223)
                     /gene="mltG"
                     /locus_tag="R8X70_000611"
     CDS             complement(24222..25223)
                     /gene="mltG"
                     /locus_tag="R8X70_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEF2928415.1"
                     /translation="MRIPFLRTKNTTEINTIKTSNTYTIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFLPQGSIAQIITHLKQNKYEMSTIDKYILFFLGHPQSGWINIGTKELN
                     RIEFLHKLTIAKAALETLTLIPGETSVIFLEQAAKQLELDKNTLLAEFEKQATYKEGV
                     FLPETYKIPKGITEALLVQVLLKHAENSNRKTSEKIFGEYNAKKWHQYIITASVIQKE
                     AANESEMPIVASVIYNRIKKGMKLQMDGTLNYGFYSHTKITPQRIREDNSSYNTYKFE
                     GLPKEAVCNVSLSAIRAAIFPAKTDYLYFVRDKTTGAHIFSTNLNDHNKAIQSQKNK"
     gene            25138..>26142
                     /locus_tag="R8X70_000612"
     CDS             25138..>26142
                     /locus_tag="R8X70_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3971 domain-containing protein"
                     /protein_id="HEF2928416.1"
                     /translation="MKKKIVYVLLVLIVFISVVFLVLKNGILISHIQFSFLNLEQLYI
                     KLDKKLIVRAKNITFNEDNNASIQDDKNVNSDFASKELLNITKNLKYFYTFVEEIDIQ
                     NFNIKDNHMRILFKNDEFFVDNDLLFLKLALHREGKEINADIKNLLLKDYNLSIDGNL
                     SINAKSEFYNFKGQANSDLADFKINISYKNQNLAYKFEDINIRDITTIFNQAKKRIAL
                     PEPLVLWVAHRAKGDFYHFDFIQGFIDFSKNNYYFDDISAWGYANNVKVRLDNQMNAI
                     NFPKLDLNLSNQKLNFTFNKASYNESDLSESKVFLYDLFDNKKHGIYLRIKSKNLKFD
                     E"
BASE COUNT         8725 a         3746 c         4477 g         9194 t
ORIGIN      
        1 atatttaaaa ataaaactaa tttcatctaa aaaccttttt ttaattttat tttacttcag
       61 tatggattta aaatcaataa atttttatct aagtgtttta ttgaaactca agttatttgg
      121 agtttattgc attattttag aaaaattaaa atttttctaa aatttcttgc acagcataag
      181 cattttgtat atttgctagg taattttcct tatttaaaaa caaatcatat aaagccatat
      241 gttcgccaaa aaggggtgtt tgtgtcatca gttctaagtt ttgtccatct ttacttaggg
      301 aaaaatctgc taaatttgcc tcgtaaaaat gatttttact cacaagtgta atttttctta
      361 gtttttgcgt actgttccag ctttgatgca cacaagcgat cgttttttct agcttgcagg
      421 ttataatgct ttcatcttct ctttgattgt ctttgttgaa actttttaaa atgttagcat
      481 ttgtaatttt ctctgcgctt aaaaaatgaa gcaagtcaag atcatgcaca gccaaatctt
      541 gcaaaattcc tacatcactg attctttgcg gataagtgga aaatctttgt atattgatgc
      601 tgataatttc ttcattttga agctcttttt ttagagccaa aactgcagga ttaaatcttt
      661 cgcaaaatcc cacacccact tttacattat gatctttagc caaatttgaa atttcattta
      721 tttcatttaa atttagtgct aaaggttttt cgatcaatac gcatttacat ttacaaaaaa
      781 cctttctagc tatttctaaa tgtgaatttg tcggtgttgc aatgatgatg atgtcattat
      841 cttgatttaa aaattcatcc aaattaataa aaaaaggcgc gtttaaattt ttattttcaa
      901 ccatatcaaa caaagcgttg attttaaaat ttttattttt actaagctcg tttaaatggt
      961 tttgccccat ttttccaagg cctacaattc ctactttcaa gagaaaaatc cttcattttc
     1021 aagttcgctt aaaacttgtt ttaagagttt gattttttcc cattgagaat gagtgaagat
     1081 ttcatttcct tcttcagtgg agctaaagcc acattgtgtg ctgatttcaa tttgttttgg
     1141 atttaaaaat tgagctgcta tttttactct tgcttttaac tcttctacgc ttggactttc
     1201 attggttttg ctagtaagaa ttcctaaaac cgcaatttga tcgttgatgt attttaaagg
     1261 ttcaaaattt ccagcccttt catcatcaaa ttctaagaag aatttatcga ctctaagttc
     1321 tccaaaaagc ttcttagcga ctttcatata gcccccactt gctacatagc gactgcggta
     1381 gtttccacga caaatatgaa ttgcactcat tatgtttttt ggcatagttt ttaaactctc
     1441 atttaaaaaa tctacatatt cttcacaaat atcatctgtg ttgatctcat ttaaagcgca
     1501 aaattcataa tcacataaag aaccaaagct tgtatcatca agttgcaaat atactccacc
     1561 aagagctgca aattctttgt aaaaattttc ataagcattt aaaatatcat ttttaagttt
     1621 tgtaaaatct ttaccatagt aattaaattc tgtgtttttg cccccgcgga taaaaagcat
     1681 atataaaagc attgaagggc ttggaatggt aagttttaag cgatttgtat ctatttttaa
     1741 accttttgca atttgcatta atctttcaaa atcttttaaa aaaggatggt tattgcactc
     1801 gattttactt tcaatttcta tgccctcagc ccttgtttct atccctttaa agatataacc
     1861 cttttctttt ttgatttttt taatgccgcc aaaaccccag taaaaatcaa gatgccacca
     1921 agaacggcgt aattccccat cacttaaata ataaattccc gccttatcgc actcttctaa
     1981 aagatctctt atgcaagaat cttcaatgct gcgaagttgt tcttcatcga tttttcccaa
     2041 ggcaaaattt tctctagctt cttttaaaat tttaggtctt aaaaaagatc ccacttgatc
     2101 taatttcata gtccttcctt aaacacttta attacacttt cttgctcact ttgacttaaa
     2161 aatgctgaaa atggcaagga taaaatatgc ttactcgcaa attctgattt ttctaatttt
     2221 aaatgcgaaa attcactgaa gcaaggttgc ttgtgaagtg gtgtaggata atggatagca
     2281 taaggaatgt ttgctttttc aaaagctttt aaaactctag ctctatcctc tactaaaacg
     2341 ctatattgcg cataagcact gatggcgttt tcatcaatct ttggaatttg gcaatttgtc
     2401 aaattttcgt tgtagaattt tgctatttct tgtcttttgc taatttcttc atctaggtgt
     2461 tttaatttta catttaaaat ggctgcttga agagtatcaa gacgagcatt tatccctata
     2521 aattcatgtt tataacgatc agtttgtcca tgattgagta aaattcttaa ttttttagct
     2581 atgctctcat cgttacaaaa aatcgctcca ccatcgccat aagcccccaa aggcttagaa
     2641 ggaaaaaagc tagtgcatga aattttggca atagagcaag atttttcacc cttaaagctt
     2701 gctccaaaac tttgtgcgcc atcttcaatc aagcttatat ttttgctttc gcaaaaggcg
     2761 tttagttctt gtaaattact catttgacca aacatactca cagcaataat tgcttttgtt
     2821 ttaggagtga tggcgttttt taggagttca aaatcgatat taaaattatc taaatttata
     2881 tctacaaata caggcttagc tccaagtaat gcgaccattt cagcggtagc tataaaagta
     2941 aagctaggca ctatgacttc atcttcttgt ttgatatcta aagcccttaa agcaagatat
     3001 aaagcacttg tgccacttga gcatcctatt gcgtgttgta catgagtgta tcgggctaaa
     3061 ttcgcttcaa attcgtttaa ttttgcacct cctataaaag aggagcttga taaaacactt
     3121 gcaatttcag aatcgatttc ttctttatac tgaagatatt gagtttgaag attgataaaa
     3181 ttcataaaaa accttgaaaa ttaaagaaat taattaaaaa ggcttattgt attttagttt
     3241 tacttaattt aaagtaattt tggtatgata tgcttttata aaaatttctt aggaaaatct
     3301 tatggatgtt agaagtgaat atttaaattt ttttaagtct aagggtcatg aaatcacacc
     3361 ttcaagtcct ttagttcctg atgatgcaac cttgcttttt acaaatgcgg gaatggtgcc
     3421 ttttaaaagt atatttatag gagaagtgcc tcgtccaaac ccaccacgca aaacaagctg
     3481 ccaaacttgt ataagagcag ggggaaaaca caatgattta gataatgtag gctatactgc
     3541 tcgccatcat actttttttg aaatgttagg aaacttcagc tttggggatt attttaaaga
     3601 acaagctatc gcttatgctt gggaatttgt aactgaggtg ttaaaacttc ctaaagatag
     3661 actttatgta accgtacatg aaagcgatga tgaagcgttt gaattgtggc aaaaacatat
     3721 ccaaaaagaa agaatttata gatttggcga taaggataat ttttggcaaa tgggcgatac
     3781 aggcccttgt ggtccttgta gcgagatctt ttatgatcaa ggcgaagagt attttaatgg
     3841 agaagaagat tatatgggtg gagatggaga taggttctta gaaatttgga accttgtttt
     3901 catgcagtat gaaagaagtg ctgatggtaa acttacgcct ttgccaaaac caagtattga
     3961 tacaggaatg gggcttgaaa gggttacagc tatcaaagag ggtaaattta gcaattttga
     4021 cagctcgctt tttatgccta ttatcgatga aattgcaaaa ctttgtggta aaacttatat
     4081 ttatgaaagt ggagctagct ttagagttat cgctgatcat ataagatcga gtgtattttt
     4141 gctcgctcaa ggaacgagtt ttgataaaga gggtaggggt tatgttttac gccgtatttt
     4201 acgccgtgct ttaagacatg ggtatttatt ggggcttaaa aaacctttta tgtataattt
     4261 agttgatgta gtttgcaagc ttatgggtga gcattatacc tatcttaatg aaaagaaaga
     4321 ttttataaaa gagcaaatct gcttagaaga agagagattt ttgagcacta tagaaaacgg
     4381 tattgaaatt tttaatgaag agcttaaaaa taccaaagaa gtttttagcg gagaggttgc
     4441 attcaagctt tatgatactt atggttttcc acttgattta acgcaagata tgttaagaga
     4501 aaaaaatctt gtggtagatg aagctaaatt tgaagaattg atgaatgaac aaaaaaatcg
     4561 tgcaaaagct tcttggaaag gaagcggcga taaggtagca agtggagatt ttaaaaattt
     4621 acttgaaaaa tttggagaaa attgctttgt gggttatgaa aaaacagaat gtcaagccac
     4681 cgttttagct cttttagatg aagattttaa agaagtttca agtcttaaag gtctaggctg
     4741 ggttatgctt gataatactc ctttttatgc aacaagtggg gggcaaattg ctgatacagg
     4801 atatatagga actagcgaag tgctagatac tcaaaagttt ttcaatctca atcttagtct
     4861 tgtaaaagct aatgaagaaa tcaagcttaa tgataagata atagcaaaaa ttgataccga
     4921 caaaagagaa caaactgcac gccatcattc agctactcat cttttacatc acgctttaag
     4981 agaaattttg ggttctcata tcagtcaagc aggttctttg gttgaaagca ataaattaag
     5041 atttgatttt actcatcaca aagctttaag caaggaagaa ttagaaagta ttgaaaaaag
     5101 agttaatgaa atgatcatta gctcaagcga agcaatttta gaaaatatgc ctttagaaga
     5161 tgctaaaaaa agtggagcta ttgctttatt taatgaaaaa tatcaaggta atgtacgcgt
     5221 tttaacttta ggtgaaagta aagagctttg cggaggaact catgtaaaaa atacagctca
     5281 aataggaagt ttttacatag ttaaagaaag tggtgtaagt gcaggtgtaa ggcgtataga
     5341 agcggttgtt tcaagagcag ctttagaatt ttgcaagact tttatgaatg aaaatctaaa
     5401 ccttaaagaa gagcttaaaa gcaatgattt aagtcttggg gtaaaaaaac ttaaaaatga
     5461 aattctaaaa ttaaaaaacg agcttaaaaa ttctaacaaa tcacagctta actcaagcaa
     5521 tatcaatgga gttcaaattt gcgttgaatg cgtagaaagc ggtgatataa aaaccatgat
     5581 tgatgaattt aaaaacaaat ttgaaaaagc tgctatttta ctaatacaaa caaaagatga
     5641 taagataacc cttgcagcag gtgtgaaaaa ttgtccttta aaagctggaa atttggttaa
     5701 aaatattgct caaattttag gtggcaatgg cggcggaaga gatgattttg ctacagcagg
     5761 cggtaaagat ataagcaaga tagatgaagc tttaaaacag gctttggatt tgatccaaaa
     5821 aggactttaa gcaatgttaa ttcttgcttc aagttctgtt tctagatcga atttgctcaa
     5881 agaggcaaag attgaatttc aacaaataag ctttgactat gatgaaaatt tagacaaaaa
     5941 tttaaagcct agtatttatg tgcaaaaaat cgtcttagag aaagaaagac aattttgcac
     6001 gacttatgaa gagaaattta aagatgaaac tttactcttt gcagacagca tagtttgcat
     6061 aggagataaa attcttacta aggcaaatac caaagaagaa gcttgtgaaa tgcttgattt
     6121 acaagatgga aaatgtgcta gtgttttaag tgcttttttg ttaaagaatt taaaaaaaag
     6181 agttttctct ctttcaaaaa caacgcttta tttttcaaaa tttgatcctc gtgatttaaa
     6241 agactatgta gaaaatggat tttataaggg taaagcaggg gcgattatgt gtgagggttt
     6301 tcataaaaac tatatcatta aacaagaggg aaatttaaac accgctttag gacttgatac
     6361 tcaaaattta aaggcttatt tatgaaaatt ttaaaatata tattttcatt ttttgttgtg
     6421 tgtttgatcg ctgtatttat ttatgtggcc tatctttttg caaatgcaga tactcaagga
     6481 tatactttta aagagtataa acctccactt acaacgcaaa tttacgacag aaatggaaaa
     6541 ttagtagcca atatctttga acaacatcgt ttttatgcaa gctatgaaga attacccccg
     6601 cgtcttatag aagctcttgt agctatagaa gatactagct tttttgaaca tgatggggta
     6661 aatattgatg ctatttttag ggctattgtt aaaattataa gaagtggtgg aaaaaccatg
     6721 gagggagctt caacgcttac tcaacaattt atcaaaaata cagaattaac ccctgaaaga
     6781 actatcactc gtaaaattcg cgaagccttg ctcgcctata aaatggaaac aattttaagc
     6841 aaagagcaaa ttttggaaag atatttaaat tatatctttt ttggacatgg atattatggg
     6901 gttaaaacag ctgcgcaagg atattttcat aaaaatctaa atgagttaag ccttaaagag
     6961 attgctatgc ttgtgggtat gccaaaagca ccaagtagct atgatcctac aaaacattta
     7021 gatctttcta tcgcaagggc aaataatgtt gtagcaagaa tgtatacatt aggttggatt
     7081 tctaaagcag aatatgatga agctatgaaa gaaattcctc aagtttatga tgatacttta
     7141 acgcaaaatg cagctcctta tgttgtagat gaggtgatta agcaattaag tcctagcatt
     7201 aaagatctta aaacaggcgg ctataaaatc actttaaata tagatttaga tgtgcaagaa
     7261 atggctcaaa atgccttaaa atttggttat gatgaaatag taaagcgtga taaggatgca
     7321 aatttaagta cgctaaatgg agctatggtg gtggttaatc atcaaagtgg agatgtttta
     7381 gccttagtgg gtggggttga ttatgaaaaa agtaattaca accgagctac tcaaagcaca
     7441 cgacaaccag gcagctcctt taaacctttt gtgtatcaag cagctattaa tctaggctat
     7501 tcgcctatga gtgagattgc agatatttct agaatttttg aaggtggagc aggggataat
     7561 aaagactgga aacctaaaaa tgatggaggt aaattccttg gcttgattac cctaaaagaa
     7621 gccttaacac gttcaagaaa cctagctact atcaatcttg ctcttggtat gggacttgat
     7681 gtgcttcatt caaagcttgt agaatttggc tttagggata ttccggctaa tttatcgatt
     7741 gttttaggaa gctttggaat ttctcctttg gagtattcta aattttatac tatgtttgga
     7801 aattatggag ttataaaaga gccacaaatc attaagcaag tacaagatag aaatgatcaa
     7861 attattatgg aatttaactc aaatgaatac agagtgagcg atgaagcgca aagctttttg
     7921 gttttggata tgatgagaaa tgttgtagag catggtacag gacgcaatgc aagggttgaa
     7981 ggcatagaaa tagcaggcaa aacaggaact accaataaaa atatcgatgc ttggttttgt
     8041 ggcttaacac ctgagattga agctttgatt tggtatggaa atgacaataa taagcctatg
     8101 cgttatacag agggcggggc taggacttct gctcccgtgt ttaaggaatt tttaaataaa
     8161 tacttagaga aatttcctga tactacaaga aaattcagca ttccaaatgg ggtatataga
     8221 ggaagttata aggggcaaaa tgcttattat actatcaaat cacctctgcc aagaacgaat
     8281 atgaaattta atgaaagtga gattttattt taaaagtatg tgaagaaata gaaaaatcta
     8341 tttcttctaa aagagttaag ctttttcgat aacaatctca tcattttttg catcgataac
     8401 aatctcatca ttttcattaa gcttgtctgc aagtatcata tcgcttagct tgtcttcgat
     8461 taaatcataa atagcccttc ttaaaggtct agcaccaaag tcaggatcaa atccgtcctt
     8521 agcgattaaa agcgcagcat tttcactaag acttgctttt atacccttat tttccaaact
     8581 tttttgcaag tctttaaata aaagtttaac tatctcatat gcctcatctt ttccaagtgg
     8641 attaaaggtg atgatatcgt ctaagcggtt taaaaattca ggtttaaaga aattttttaa
     8701 ctcatttttt accgcatctt cttgttcttt tccgcttaaa ttcatgatag cacttgaggc
     8761 gatattagaa gttaaaataa taatggtatt tttaaaatcc acagttacac ccttgctatc
     8821 agttgcccta ccatcgtcta aaattcctaa aagtatatta aacacatcct tgtgggcttt
     8881 ttcgacttca tcaaataaaa gcacgctata aggttttcta cgcaccgctt cagtaagctc
     8941 tccgccttct tcatgcccta cataacctgg aggcgctcct aagagtcttg aaacgctatg
     9001 tttttccata aattcactca tatcaaagcg aatcattgct ttttcatcat caaataaaaa
     9061 tttcgccaaa gccttagcag attgtgtttt tcctactcct gtaggcccta aaaataaaaa
     9121 gcttcctata ggcttattgt ctgcatttaa tcctgcttta ttgcgtttga tagctcttgc
     9181 taaagcgctt agagccttat cttgcccaat cacactttct tttaagtgtt tttctacttc
     9241 caaaaatttt tgcttctctg aagtcagcat tttttgcacg ctaattcctg tccatttgct
     9301 taaaattcca gcaaccaaat cttcatccac ttgattttta agcaagactc cattttcgct
     9361 catttttttc catttttctt ctaaatttgc cacttctttt tcgcattctg gaattttgcc
     9421 atattctaat tctgcagctt tttggaattc acccttattt tttgcaaaaa cagcttcgtt
     9481 tttaagacta tcgatttctt ttttctttgc gcttatgcta tcaaaaactg ctttttcatt
     9541 ttcaaattgt gaatttaaag cactttgttt ttcttttaaa ttggccagtt ctttggcaat
     9601 ttcatctagt cttttttgat ttttttcatc attttccatc tttagagctt cattttctac
     9661 ttctaaagtt tctatgtctt tgcgtgcctt tctcaaagag cttggttcgc tttcaatttg
     9721 cattttaagt tcagccgcag cttcatcgat taaatcaatt gctttatcgg gtaaaaaacg
     9781 atcggcaata tagcgttttg aaagcttagc tgccgctact aaagcactat cattgatggt
     9841 gacattgtga tgaatttcaa gtttttcttt aatacccctt agcattgcta aagcttcatt
     9901 tacgctaggt tcgcctacat ttacaggttg aaaacggcgt tgcaaggccg catctttttc
     9961 aaagtattta cgatattctt taagagtggt tgctcctatg gtgtgaagtt cgcctcttgc
    10021 aagtgccggc tttaaaatat ttgcagcatc catacttcct tcgcttgctc ctgcgcctac
    10081 tatggtgtga atttcatcga taaaaagtat gatattttca cttttaatga cctcatttac
    10141 caccgctttt aatctatctt caaattctcc acgatatttt gctcctgcga tcaatgcact
    10201 catatcaaga gctatgactt ttttattttg taaagatttt ggcacatctt ttttgataat
    10261 tctttgtgct aaagcttcta cgatcgctgt ttttcctact cctggttcac ctaaaagtat
    10321 agggttgttt tttgttttgc gtataagaat ttgcattaag cgttcgattt cttcttctct
    10381 gcctataaca ggatcaagct ttccttcact tgcttttgcg gttaaatcta taccaaattt
    10441 atttaagcta tctagggttt catcacttgt tttgctttcg attttgcgtc ctgctcttaa
    10501 attttggagc tctttttgaa attctttaat atctataaat ttggctaaaa tttctctaat
    10561 aggatttttt tcgctttcgc ttataagcca agtatctaca cttaagtaat tatcaccatt
    10621 ggcactcata agtcctttag cactttctaa ggaattgata aattcattag aaaaacgcac
    10681 attttcacga ttgacattag agcttgttgc aagatttgaa attctgcttt tgatttcaag
    10741 ttctaaagct tcttttgaaa tattaaattt attacaaatt tgatttaaaa tacttgaact
    10801 gtctacaatt aaagcccata aaagatgtaa agggacaact tcattatttt tagaatgaat
    10861 cgccaaagac gctgcacttt caaggtttga aagcatattg tcggttaaaa attcttgtat
    10921 atttgccatt gtatatcctt tttcaagttt tatatatgaa gtattatata actttagtca
    10981 aataatgtca agttatttta taaaattttt gcaataaaat taagtatatt ttagaaagta
    11041 ttgaatttta agcacttaaa tagctatttt acaaacatat caatagcctt gtttaaatcc
    11101 tctatgcttt gcgtatcttt ttccatcacc gcatgataca tacaatgggc taaatgttct
    11161 ttaagtatgg ctttagcggt attgttaacc gctgctttaa ccgcagcaag ctggataaga
    11221 atatcactac aatcctcatc tctttcaacc atttttttaa tagcttctaa atgtcctata
    11281 gtgcgactta aacgattact tatggctttg atatgttttg gagaatgcgt atgagtgtgt
    11341 ttcatttata ttctttcttg ctttgaaatt aaaaaatata aaatatttta gcattaattt
    11401 tttttaaatc cattaaactt ataacaaatt tagtattatt tacgaatttt taagcaaaag
    11461 ttattaaaat ttgggcttaa aatatttaat tttggagttc attttgagta gtaaaagatt
    11521 tctagccgct attacaggtt ttacaggctc tttggctctt tgtgtttttt tagcaagcaa
    11581 cctacaagca aaaccaaaga atccatctga tttaatgcaa caacgcttag agtctttaga
    11641 taaattgact aaaactttgg ctatagttga gcagtattat gtagatgatg aaaatattac
    11701 agatttgatt gataaatcac tttctggact tttgagcaat cttgatgcgc attcttcttt
    11761 tttaaatgaa aaagatttta atgatatgaa aattcaaaca agtggtgaat ttggtggact
    11821 tgggatcact gtaggtatga aagatggcgc cttgactgtt atttctccta tagagggaac
    11881 tccagcagat aaagctggga ttaaatcagg cgatataata ttaaaaatca acgatgaggc
    11941 tactttggga atcaatttaa acgatgcagt ggataaaatg cgcggaaaac caaagacgca
    12001 aatcactctt actatattta gaaaaggagc aactaagcct tttgatgtta ctttaacgcg
    12061 tgatattatc aaagtggaaa gtgtttatgc aaagcttatc gaagatgaaa atatacttta
    12121 tttaagagtt acgaattttg ataaaaatgt tgtggacatg acaagtaaag agcttaaaaa
    12181 acatcctaat gtaaagggtg taattttgga tttaagaaat aaccctggcg gtcttttaaa
    12241 tcaagctaca gggcttgtta atttatttgt agataaagga gtaattgttt ctcaaaaagg
    12301 acgcgttaca agtgaaaatc aagagtatac agcaaattca aaaaataaaa tttctgacag
    12361 ttctttagta gtgcttgtga atggcggaag tgcgagtgct agtgagattg ttagtggggc
    12421 tttgcaagat cttaagcgag ctataatcgt aggagaaaat acttttggaa aaggcagtgt
    12481 tcagcaaatt attccgatca atgaaactga agctttaaga cttactattg caagatatta
    12541 tttgccaagt gggcgcacta tacaagcagt aggtgtaaaa cctgatattg aagtatttcc
    12601 aggaaaagtt aatactcaag aagatggctt taatatcaaa gaaagtgatt taaagcagca
    12661 tttagaaagt gaattggaaa aacttgataa aaatgagaaa aaagaagaca aaaaagagca
    12721 aaaaaatgat aaaaatatca ttactcaaaa gcaaattaat gatgatgcgc agttaaaatc
    12781 tgccatagat accattaaaa tattaaatat taaacaagga caataattat gaaaaaaaaa
    12841 gaattacttt atgaaggtaa gggtaaaaaa ctctacacaa ccgaagatga aaattttctt
    12901 ataagcgaat ttaaagacga tttaacagcc tttaatgctg aaaaaaaagg aagtgaaagt
    12961 ggaaagggtg cattaaattg caaaatcagc acagaacttt ttcatttgct tgaaaaaaat
    13021 ggcataaaaa ctcatttagt tgaaaccatt agtgataatg agcaagtggt aaaaaaatgc
    13081 aaaattgtgc ctattgaggt tatagtgcgc aatgttgcaa caggatcgct tacaaaaaga
    13141 ttgggtatta aagacggcac agttttgcct tttgctttgg tggaattttg tcttaagaac
    13201 gatgagttag gagatccttt tatcaatgat gagcattgtt tgattttaaa tttagtacaa
    13261 aatgaagcac agattaaaga aattaaagaa atggctaaaa aaatcaatgc gattttaact
    13321 cctttttttg atgctaaaaa tttaagactt attgacttta aaattgagct aggtttaact
    13381 aaagacaatg agcttgtttt agccgatgaa atcagtcctg atagctgtag attttgggat
    13441 aaatttagca atgaaaagct agacaaagat agatttcgtc aagatttagg aaatgttaaa
    13501 atggcctatg aagaagtttt aaaaagaatt ttaaactaag gaatatcatg aaaatacttg
    13561 tcaatgtttt tttaaaaaat ggtgttttag atcctcaagg aaaagctata gaaaaggctt
    13621 tacattcttt aaattttaat gaaatcaaag aagcaagagt agccaaacaa atcgtgcttg
    13681 atttagatga gagtgatgaa caaaaagcaa aagaacgcgt gaaaagtatg tgtgaagagc
    13741 ttttggtaaa tagtgtaatc gaagattatg agcttattgt aagtgagaaa tgatgaaagt
    13801 tgctattatt agatttcctg gaacaaactg cgaatttgat acccaatatg cttttgaaaa
    13861 acttggtgta aaagcacaaa tcatttggca tgaagaaaaa gaaattgatg cagacttagt
    13921 ggttttgcct ggaggatttt cgtatggaga ttatctaaga tgtgcagcca ttgctaaaat
    13981 cgctcctgct atgcaaggtg ttatcgcaca tgcgaaaaga ggaggatata ttttaggaat
    14041 ttgcaatggc tttcaaatct tgcttgaaag tggactttta gaaggtgcta tgaagcacaa
    14101 taataattta agttttatct ccaaaaatca aaatttaaga gttgtttcaa atgataatgt
    14161 ttttttaaag aattttcaaa aagatgaaat tatcaatctt cctgttgctc atggtgaagg
    14221 aaattattat gcagatgaag ctaccttgaa aaaaatgcaa gataaagatt taattctttt
    14281 aaaatacgaa ccaaatccta atggctctgt gttggatatc gcaggaattt gtgatgaaaa
    14341 taaaaaaatt tttggcctta tgcctcatcc agagcgcgct tgcgataaaa tattaggtaa
    14401 tgatataggc ttaagaatgc tcgaaggttt tatgtgagaa taatattttt tttagttttt
    14461 gtttgtctga gtctttttgc tcgaagtgaa atttctgttt ttgatggtca agatgaaaat
    14521 atgcaaagag aattgcaaaa acttccaaaa gaggaacagc aaatctatca aaatatcgct
    14581 ccaagtgatg aaaattccga ttttgatagt aatatatatg atccttttat acctcaaagt
    14641 tcattagttc ttactactga tgattatgtt aataaagtat atgttggaga agtatttccc
    14701 atagttcttc atgctaagat tacagaggat acaaattttg attttaacat cactttgcaa
    14761 aaaagcaagg acttgatctt tttaaatcct gatttaaaat gggaatatat taaaggcgat
    14821 tatagggctg ttttgtggtt tgaggctaaa acttcaaatg caaatttaga acagatttca
    14881 gtcagccttt taagaaatgg aaaaattttt caaagtgcta gtattagtat aggtgctatc
    14941 cattttgaaa atacacctaa taataaaaat ttttcacatc ttgtggcaag ttccttggag
    15001 gttaaaaaaa tcaaaaccag ttattttgat gattcaagca ttattacaat gattgaacta
    15061 agcgccacaa atgcaaatct taagagcttt tttgtaaatg gagtcgagaa acagggtatt
    15121 gaaaatttaa agggtgattt taattcttct aatgcttttt attatgctat ttttccatcg
    15181 actaaaacag attttgaatt ttcttatttt aacaaagata ctaaaaaaat ggaaaatatg
    15241 agctttaagc ttaaaatcag cgatgatgag gtgagcactc aaagcgattt aaatcctaca
    15301 aatagggatt ttaatattta taaacaatat gctctttggg ctttgactct tattttggca
    15361 ttatggtttg tttggaagaa aaattatttt attttagcag gagcgctttt atgttttata
    15421 cttggttttc ttgtagatac taacacagaa aatgcaattt taaaagcggg ttctagggct
    15481 aaaattttac caactgaatc atcaacttat ttttatacag caaattctaa cgaaaaggtt
    15541 gaggtgttag gcaaaagact tcattatgtt aaagtgcttt ttcgcgatga taagatagga
    15601 tgggttgaaa gtagtgattt acaaaaaaat taaagcttta tatttttggt tcttttttat
    15661 tataagcgta gcttttgttg tgctatgttt ttgttttatc aaatctcaag atacgctttg
    15721 gaaacttcga aaatcttggg ctagatttca aaaaaatatt cttttttgca aatatgaagt
    15781 cataggggaa tttgatctta aagcaaatat gattttaatg aatcatcaaa gtaccttaga
    15841 tatcatagct ttagaggatt tgtatcctaa aaatttatgt tggattgcca aaaaagaatt
    15901 aggcgaaatt cctcttttta aaattgccat taaaaaacct aaacttcttt gcatagatag
    15961 aaaaaatcca cgcgatttgg tgcgtgtttt aaaagaagct aaacaaaggc ttagtgaaga
    16021 tagagttttg gcgatttttc ctgaaggaac gcgttctagg aatgaaaaat tgcttaaatt
    16081 tcaaagtggt gctaaaattt taagtgaaaa gcttgattta aaagtgcagc ctattttgat
    16141 tgttgattct gcgaaaattt tagacactaa aagttttagt gctagttctg gagtattgaa
    16201 aatcatttgc atggatttag tggatacgag tgataaaaaa tggcttgaaa atactagaaa
    16261 aaaaatgcaa gaattactag atcaagaaag agctaagctt tgctaaatac cattttagtt
    16321 gttggtcttg ggggttttat aggggcggtt ttaagaatgc tttctatcaa tttgataaat
    16381 aaaattttac cccattctat aagctttggt actctttttg ttaatgtctt aggatctttt
    16441 atgatggggc ttttgttttc ttatgcacat cataagggtt tatctcctgc gctcaaaagc
    16501 tttataagta caggattttt aggagctttt acaacttttt ctacattttc ttatgaaaat
    16561 ttactgcttt tacaaagtgg aaattatttt aatttttctt taaatatttt attaaatata
    16621 atcctttgcc tgatagcagt ttggcttggt tttataattt ttaagtaagc tcttgaaatt
    16681 taccttagaa tttgtatttt ttgctaaaat atctgtttca aaatttataa aggagaaaaa
    16741 atgcagtttc aaactgaagt aaatcaactt ttacaattga tgattcattc cttatactca
    16801 aacaaggaaa tatttttaag agaacttgta tcaaattcaa gtgatgcttt ggataaactt
    16861 aattttttaa gcgtgagtga tgataaatat aaaagtttaa aatttgaacc tagaatagat
    16921 attaaaatcg ataaagataa gaaaaccctt actattagcg ataatggtat aggtatggat
    16981 aaagatgatc ttattaacaa tcttggaacc atagcaaaaa gtggtacaaa aagtttttta
    17041 gagaatttaa gtggtgatgc aaaaaaagat tctcaactta taggacaatt tggtgtaggt
    17101 ttttattctg catttatggt ggctagtaaa atcgaagttt taagcaaaaa agctttagat
    17161 gataaagctt atctttggat ttctgatgca aatggctatg agattgaaga tgcgactaaa
    17221 gaagagcaag ggacaagtat tactttatat ttaaaagatg atgaatttgc aaattcttat
    17281 aaaatcgaaa gtattataga aaaatattca aatcatatcc aatttccaat ttttatggaa
    17341 aaagaggaat ttatccctgc taaagagggc gaggaagaag gaaaaaccga gcttaaaatt
    17401 tctcaaatta ataaagctaa tgccttgtgg agaatgcaaa aatcaagcct taagacagag
    17461 gattatgaaa gattttatga gcaaaatttt cacgattcta acaagccttt gctttatctt
    17521 catactaaga gtgagggaaa attagaatac aattctttat tttttattcc gcaaaatgca
    17581 ccttttgatc tttatcgtgt ggattatcaa agcggattaa aactttatgt aaaacgcgta
    17641 tttatcagcg atgatgataa ggagctttta ccgacttatt tgcgttttgt gcgcgggatt
    17701 attgatgtag aggatttacc acttaatgta agccgtgaaa ttttacaaga aaatcaaatt
    17761 ttaaaaggcg taaaagaagc cagcgttaaa aaaatactta gcgagcttga aaaacttaaa
    17821 aataaagata aagaaaaata tttaagcttt tttaagaatt ttggcaaagt gttaaaagag
    17881 ggactttatg gttttggtgg cgaaaaagac agtcttttaa aactcatgct ttataaaagc
    17941 actaagggtg aaagtttgcg ctctttagaa gaatataaaa atgatataca aggcgagcaa
    18001 aaagaaattt tctatatcac tggaaacaat gaaagcttgc ttagaaattc acctttactt
    18061 gaagaatata agcaaaaaaa tatagaagta ttacttatgg atgatgagat tgattctttg
    18121 gttgctccta tgcttggaga atatgaaggc ttgaaattta tagccattaa tcaagttgaa
    18181 gataaaaatg aattaagcga tgaggaaaaa aatgaatttg ctccattggt ggctaaattt
    18241 aaagagcttt taaaggatca agttgaagat gtgagactta caagtcgttt aaaagatagt
    18301 ccaagttgta ttgtttatga taaaaataag cctgattttg caatgcagca gcttttaaaa
    18361 caaatgggac aagaacaaaa ctttaaacct attttagaaa tcaatccaaa acacgccatt
    18421 tttacaggtc ttaaaaataa tgaaactttt agtgctgata tagcaacctt agttttaaat
    18481 atggcaaaac ttagcgaagg tatgggtgtg gataatccgg ctgaatttaa tgcaagcctt
    18541 acaaaaatca tcactaaggc tttctcatga ttacaaatct cccagcaagt gtttggatga
    18601 agcaggattt aagcgaatat caaatttttg atgttcgcac tccagctgaa tgggaggagg
    18661 gtgttttacc tcatgctgaa tgtgtagctt tgtatgataa tcatgggctt ttaaatgcta
    18721 attttttaga agaatttcaa gcgagaagaa atgaaaataa aaaacttgct tttatttgtc
    18781 gtggaggtca tagaagtatg atggctgcaa attttattaa aaatgaactc ggtttagaaa
    18841 gtgtaaattt agatggtggg atgttggcat taaaaggctt gatatgatag gactttattt
    18901 gttgatagca gcgttatctt ttttactcct ttattttgca cttaaaaaac ttactttaaa
    18961 tatagatgaa aaggccttgc ttgagcctat aaaatcagat atttatccca aattttgtga
    19021 tattatcgat gaaagaatta gagaatttaa ggatggggtt caaaataata gttttacctt
    19081 aaaagatcaa gataaaaaag atgaattatt ggaaaaatta ggggatttaa gcagagagct
    19141 taccttcata caaacaatga atttaagcaa taaaagcgat agtgtatggc aaagtgagct
    19201 ttttgatttt ttaaaagagc ttgaaaaatt attgcttgaa tatttggaaa atggcgaaga
    19261 agaggctgaa aatttaagag aaaatttgat gaatgaattt gaaaagctta gaggctaagg
    19321 tgcaagaacg caaaaacttt ttaaaatatc tcaagatgac tttttggggt atttttactt
    19381 tggttttaat ctttgcttta attcgattta gtgaattggc taatttattg gctggagttg
    19441 cagttttact tataggaatg accaatttaa gcctaggatt taaatctttt agtggcggct
    19501 tgcttgaaaa aattcttact cactcgacaa atacaaaact taaaagcata ctttttggtg
    19561 ctattagcac tcttatcatg caatcttcaa ctttagtttc gattatctct ctttcttttt
    19621 tgagcgcagg actaatatct ttagttgctg gtgtgggtat tatttttggt gcaaatttgg
    19681 gaaatactgc aagttcatgg ttgattgttt ggcttacaag agttaatatt tctatcttgg
    19741 ctataccttt gctcgtaatt ggagttttgt ttttctttca aaaagataat atgattaaaa
    19801 gttttggaaa tatttttata ggtataggtt ttttcttctt aggagtggat tatataaaaa
    19861 atggttttaa tgaatttcaa gatgttatag atttgtctta ttttgatttt acaggtttta
    19921 agggagtgtt gatttttgta ggtcttgggg ctttgcttac aggtattatt caatcaagca
    19981 cagcaacaat agccattata gtcacagcac tattgacagg gcaaatcagt tttgaaaatt
    20041 ctttagcagc gactttgggt acgagtgtag gaggtgtggt aacagctgtg ctagcttctt
    20101 taagtactaa tgttgagggc aaaaagcttg cttttgcaaa ttgtattttt aattttacta
    20161 ttgcaattat aatcatactt atttttcctt attttattga ttttttaaat gggatggcaa
    20221 aaattttaaa tatagaaaat ttagctttaa aaatggcctt atttcatact ttgtttaatc
    20281 ttttaggaat atttatcttt gtattgttta tcccacaatt ggtaaatttt ttaaacaaaa
    20341 tcgttaaagc acctaaagat aaaaataaag atcgaccctt atatcttgaa cctagtttat
    20401 tgaaatttag tgatacagct atcgaagctt tgcgaaaaga aagcgaacat ctttatgata
    20461 atgcgtatgc gattatcgct catgctatag ggttgagtcg taaagatata caaagcaata
    20521 aaagctttga agaaattttg caaaataaaa aatggtttag taaaaatgtg gatttggatt
    20581 atttgtatca aactagaatc aaagtgcttt ttgaagctat cattgacttt tcaaccaaag
    20641 cgcaaattca catagatgat gaacttaaaa atcacagaat ttttactttt aaaatcgctg
    20701 ctaaaaatct tacagaggca actaaaaatt taaaattagt tcaagaaaat atcaaaaaat
    20761 actctaattg cggtaataaa gatttggcct tagaatacaa taaaataaga tctaatttag
    20821 gagaattgct aagaagtatt caagagctta gaagcgtgga cgatgaaaaa gtgtatttga
    20881 ttattaaaaa ttttcaaaaa ggtaaggaaa ttctaaaaga aattgatggt ttaactctta
    20941 ataatgtcga acatcttatt ttagttagaa aaatcactac cgcagagggt atatctataa
    21001 ttaatgatac aagttttatt gctaagattg ctaaagatct tatagatgcc gttgaaatca
    21061 ttttcgcaag agaaaaggtg ctttgggatg atattaatta agagtttgat tattttctgt
    21121 gatgataggg gttagaaaat cttcattgat taaaatatct acaacatctt taaacatagg
    21181 taaagcactt tgagcagcat agtaactata aggcttggta gggtttctta ctaaaacccc
    21241 tatggtatag ttatgttttg tatcgttggc aaaaccgaaa aaagaagcat tatagcgatt
    21301 ggaggtatag ccttgtcttt ctgcaatacg cgcagttcct gttttacccc ctacgattat
    21361 accttgagtg atagcttttt ttcctgtacc tttttctata acatcaataa gaattttttg
    21421 catggtttgc gctgcttgcg gggttaaaat aacttctttt ttgatatcct cttcaagact
    21481 tacaaagcgt ccatcttgat agaatttttc agccaaatgc ggagtgatgt aaactccatt
    21541 gttattaaaa acattataag cagcaagtag ttgtataaag gttgttttta agccatatcc
    21601 atagcttaat accgactttt ctatatctct taagcgcttg gaattaggga tttctccttt
    21661 ttgctcgtaa ggcaagtcaa ttccgctttt ttcgccaaat ttaaaaattt taagtccagc
    21721 aatgatttca agattactca atcttttcgc aatttgtatc atacctatat tagaagaata
    21781 tctaatcacc tcttccatag tcatttgatc cattttatga tcatctctaa tagtgaaacg
    21841 ccccagttta taagctccac cataggtgtt aattacttca tctgtcttga gtttgccaag
    21901 tcttagagca gttgtaaaaa taaaaggctt gataaccgat cctgcttcat atccatactc
    21961 tatagcgctt gcatttaaaa cagataaatc tttaccgcga ttttggggat cataacgcct
    22021 agaacttgcc agagctagaa tttgacctgt tttactatcc ataactccga ctatgatttc
    22081 attagctttt aaatcttcat ttcttccatc aatcgctttt tcaatgcttt tttgaagttt
    22141 taaggatata ttaagatata aaagacagcc atcaatcttt ttttgctgca atgagtttaa
    22201 atttaagatt atatttccac ctatatcttt taggccttga attttttcat tttggagtgg
    22261 acttaagcag tcgtcatagt atttttcaag tccttttact ccaacatttt ttaaaattcc
    22321 gctttgagga tctaaaacca ttttagtata acctatggct ggagttaaag catctttaga
    22381 catataaatt ctatcttctt catgttcgat aatgcttaaa cctcttgttt caacctttcc
    22441 taggttattg gtaaatgctt taaaaaatcc ttgtatataa agcttttttg caagatctct
    22501 aagatagctt gcttgtttag aatctaaatt ttgagaaagg ataaaatgat aggatcgttt
    22561 tttctgtttt tgaattcttt ttttaatatc tgcaatttca tcatcgctaa ttccactata
    22621 tatttgaaaa agctttaaaa ataaatcaaa tttatcctta ttgatacttc ttaaatcaat
    22681 ttctgcgcga taaatttgcc ttgagcttgt gatagtaaaa ttatctttag tgatgatatt
    22741 tccgcgtaag gcaagagagt attgatcttt ttcagtgttg gggatatggc gctttgaagt
    22801 gagaaaaaag gtagagctaa gaaaaatgat cataaaaaaa agcgccatgc agtaagcaaa
    22861 ggcgactttt gaaacacgat ttttcttatg ctcttgcata cagcttaaat ttgtgttctt
    22921 gtgatttctt tataagcgct gatagcttta tttcgaacct ctagcataaa tttcatactg
    22981 ctttcagctt ttgtgatagc aatagctgct tggtgtaaat cttttacctg tcctgttgca
    23041 atatctgtca tcgcagcttc tgcagttttt tgagttttat ctaaatcttc gatttcgttt
    23101 ttaagcattt tagcaaattc atcgccgatt ttatcattag aattttggct tttgtttgca
    23161 tttgaaatgt tattatttaa tcttaaatca ttaatattat tcatatttta ttatcctctt
    23221 aataaatcaa tcgcactttg agctatggtt tttgcacttg taaaagcact aacattagct
    23281 tgataagctc ttgttgcttc aatcaaatct gccatttcga tgacaggatt tacatttgga
    23341 tatgctacat agccttgcgc attagcatca ggatgagaag gatcatattt catacgaaaa
    23401 tctttatcat ctcttacgac tttatctaca acaacgcttt gtatagcagg ctttgcctct
    23461 tcaggtgagc ttggatcatt taaaggattt tcatatttta aaaagttatt gtccttatta
    23521 atttgctcgt ttaaaagctt atcaaaatct gtcgctttaa agatcacttc gcgtcttcga
    23581 taaggtccgc cttcagctgt tcttgttgtg tttgcattag ctatattgga gctaataaca
    23641 ttcattctaa agcgttgcgc acttaaacca tatccgctaa tatcaaaatc acttaagtat
    23701 gccataattt acctttaact taatttagaa cttgcatcaa gtatagagct aaaaatatta
    23761 ctttgtcttc ttaagacccc atcaagagct gtaatcatca ctgtattttt actcatttca
    23821 gttgtctcaa catctaaatc cacagtattt gcatcatttc ttgctaaatg tccatccctt
    23881 agataaatag tagatttgct aggatctggg aatttccaag gtttttgatg tccttcttca
    23941 gttattgcta attgtaattc tttattatca ttttttttaa agatttcatt tgcatgattt
    24001 actaaagcag tttcaaattc aatatctctt gctttataaa aaggagtgtc aacatttgca
    24061 aggtttgcat tgatgagttg atttcttaaa tttctacccg ctaaagcact tgtgataagt
    24121 tcttttgatt tgaatgggtt aatcattttt tatccttttt ataatttcaa aaattaacaa
    24181 gcaaatactg ttccaacttg cataaatttt tgcaatttta gttatttgtt tttttgtgat
    24241 tgaatggctt tattatgatc attgagattg gtgctaaaaa tatgcgcccc tgtggtttta
    24301 tctcttacaa aatataaata atcagttttt gcaggaaaga tagcagcacg aattgcggat
    24361 aaagagacat tacaaactgc ttctttaggc aaaccttcaa atttataagt attataagag
    24421 ctattatctt ctcttattct ttgaggagtg atttttgtat gagaataaaa tccatagttt
    24481 aaggttccat ccatttggag cttcatacct ttttttatac ggttataaat aacgcttgca
    24541 actataggca tttcgctttc attagccgct tctttttgaa tgactgatgc tgttatgatg
    24601 tattggtgcc attttttggc attgtattcg ccaaaaattt tctccgaagt ttttctattt
    24661 gaattttctg catgtttgag caaaacttga accaaaagtg cttctgtgat tccttttgga
    24721 attttgtaag tttcaggaag aaaaacccct tctttatatg tagcttgttt ttcaaattcg
    24781 gctaaaagcg tgtttttatc aagttctaat tgttttgcag cttgctctaa aaaaatcaca
    24841 ctggtttctc cagggatgag agtaagggtt tctaatgctg ctttagctat ggtgagtttg
    24901 tgtaaaaatt ctattctatt gagttctttt gtgcctatat ttatccagcc tgattgagga
    24961 tgacccaaga aaaataagat atatttatca atcgtgctca tttcatattt attttgtttt
    25021 agatgtgtta taatttgagc aatggaacct tgaggcaaaa aaacaacaga attgcttttt
    25081 aaaggttgtg ttaaataata aaaaattcct aaaataaata tcaaaaagaa gtttctaatg
    25141 aaaaagaaaa ttgtatatgt attacttgtt ttaattgtat ttatctcagt tgtattttta
    25201 gttcttaaga atggtattct catatctcat atccaattta gttttttaaa tttggagcaa
    25261 ttatatatta aattagataa aaaactcatt gtacgagcaa aaaatatcac atttaatgaa
    25321 gataacaatg caagtattca ggatgataag aatgtaaatt ctgactttgc ttctaaggaa
    25381 ttgttaaata ttactaaaaa tttaaaatat ttttatactt ttgttgagga aatagacata
    25441 caaaatttca atatcaaaga taatcatatg cgtatattgt ttaaaaatga tgaatttttt
    25501 gtagataatg atttattgtt tttaaaactt gcgctacaca gagaaggaaa ggaaattaat
    25561 gctgatatta aaaatctttt gcttaaagat tataatttaa gcatagatgg aaatttaagt
    25621 attaatgcaa aaagtgaatt ttataatttt aaaggccaag caaatagtga tttggctgat
    25681 tttaagataa atatttctta caaaaatcaa aacctagcct ataaatttga agatatcaat
    25741 attagagata ttaccactat cttcaatcaa gcaaaaaaaa gaatagcatt gcccgaacct
    25801 ttagttcttt gggttgcgca tagggctaaa ggagattttt atcattttga ttttattcaa
    25861 ggttttattg atttttctaa aaataattat tattttgatg atatcagtgc ttggggttat
    25921 gcaaataatg taaaagttcg tttggataat caaatgaatg ctattaattt tccaaaactt
    25981 gatttaaatt taagcaatca aaaattaaat tttaccttca ataaggcaag ttataatgaa
    26041 tcagatttaa gtgaaagcaa ggtgttttta tatgatttat ttgataataa aaagcatgga
    26101 atttacttgc gtatcaaatc taaaaattta aaatttgatg aa
//
LOCUS       DAQUWA010000017        24796 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.017, whole genome shotgun sequence.
ACCESSION   DAQUWA010000017 DAQUWA010000000
VERSION     DAQUWA010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24796
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.017"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            6..677
                     /locus_tag="R8X70_000613"
     CDS             6..677
                     /locus_tag="R8X70_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEF2928417.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLTQFNIKITNFENPKEALNVGIQG
                     YDCLILDLTLPGIDGLEVCREIRQKYNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMHARIMSLIRRTKRAENTNNENINSAFKIDERKHEITYQNKVLTLTPAEYEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRTKINDSSKAPKHIFSVRGIG
                     YKLIG"
     gene            674..1924
                     /locus_tag="R8X70_000614"
     CDS             674..1924
                     /locus_tag="R8X70_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEF2928418.1"
                     /translation="MTRNYSIYTKLVILFVVTFFLVCVLFIVLLKIESNTYSEEEGFK
                     QESFIKNIINSYGNASGVDIGAHLNNSGFVAIQNDYFVKIARLEGQSLFRAGNGENAC
                     TLTSLKYQNKLYLDVQCKDFSALFEEDTNNRVYNLLLIGFFFFSFLVVFMYFSVLKSL
                     EPLKKLRKQVAEVANGGKADFENYQEDEVGKIALEFQKAFKKNQELIQSRQLFLRTIM
                     HELKTPIGKGRIISEMLQEEKQKERLIDIFLRMDSLINEFAKIENLFSKNYNLQFKPV
                     HFSTILNEAKDYLMRDDFNRVVKLNLKHDALINVDMEIFPLILKNLIDNALKYSSNGT
                     CELYCCKECFVIKNPGNPLREPIEHYFEAFTREPYQKVKGMGLGLYIVFEVCKLHNFD
                     IIYFYEEGKHCFKIFFGVKTNNDA"
     gene            1914..2489
                     /gene="recR"
                     /locus_tag="R8X70_000615"
     CDS             1914..2489
                     /gene="recR"
                     /locus_tag="R8X70_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEF2928419.1"
                     /translation="MTHKGIEKFNELVESFAKLPTIGKKTAIRLAYHICTGNQLEGMK
                     LAHNIENAIRFIKPCQQCGSLSENELCEICTDDERDKNCLCIVQSPKDVLVIEESKSY
                     GGLYFVLDELNDEKLAQLRQMILKLQSKELIFAFTHNLNSDAMIFYIEDRLKDLNLQF
                     SKIAQGIPSGVNLENVDFISLNKAINFRTKV"
     gene            complement(2491..3024)
                     /locus_tag="R8X70_000616"
     CDS             complement(2491..3024)
                     /locus_tag="R8X70_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HEF2928420.1"
                     /translation="MKFLVLGIGNIMFADEGIGVHLCKLLEKNYKFTHSNHSLDFVDG
                     GTLALQLSYIIAEYDKMIVLDCIDADDSKIGDVFFFPYDAMPKKINWSGSAHEVEMLQ
                     TLQYMELMGDLPHTQILACVPKRIKPMSFTLSQEIVSAGEIMEKTLLEYLTKEGFSYE
                     KIANHSLQELADISYKN"
     gene            complement(3021..3713)
                     /gene="cybH"
                     /locus_tag="R8X70_000617"
     CDS             complement(3021..3713)
                     /gene="cybH"
                     /locus_tag="R8X70_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HEF2928421.1"
                     /translation="MQNKEEKLQRKAEYEFSIGLRLTHWVRAFAIVVLVITGYYLSYV
                     FQNPISNGEPVNFMQAKYRMVHQAVGFVLIACVIFKVYLFFFDRISRKERISIVDALN
                     PKLWIEQIKFYLFLGKHPHLKGVYNPLQFVTYIFFYIVMVGIILTGLILYTHTYHEGL
                     GGLLYEVLRPLEAALGGLADVRTYHRILMWVILIFVPVHIYMAFFNAIKGKDGAIDAI
                     VSGYKFVKEEKN"
     gene            complement(3725..5440)
                     /locus_tag="R8X70_000618"
     CDS             complement(3725..5440)
                     /locus_tag="R8X70_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HEF2928422.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTSNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLTPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCVMDLLSPARMGEYMEKFKEVQDFVNRAYYPDLVMAGKAYADEPSVLNDI
                     GVNNLYTFQEFQLGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YEGKTNPNYTGLVEGESVDHHGNTVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANIV
                     VNYAKGNQNVVPVVDEFLKETGLPLNAVFSTLGRTAARCLEAKIVANNALKAFRNLVE
                     NLKVDESTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGVGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDTKGNNLSEYK
                     VNASL"
     gene            complement(5446..6585)
                     /locus_tag="R8X70_000619"
     CDS             complement(5446..6585)
                     /locus_tag="R8X70_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HEF2928423.1"
                     /translation="MIDYNQIESRLSALEKLPSLNPENSIPKALERSGFTRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVIWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLESAIEKYKNKYILMVEGGIPMGDTENFLTIGPHGKS
                     GYELSKVASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVQNFGDEGAK
                     NGYCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPNFWDTMGPFEEPMA
                     SRKFDTVFGLGADNVSDKIGIGVLTLTGVAIAAHAVIASMKKNEE"
     gene            complement(6718..8553)
                     /gene="mnmC"
                     /locus_tag="R8X70_000620"
     CDS             complement(6718..8553)
                     /gene="mnmC"
                     /locus_tag="R8X70_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEF2928424.1"
                     /translation="MKKANLIFKDNTPFSLDFDDFYFNSKDGLNESKFVYSEAFEFEE
                     NDTFIIAESGFGIGLNFFLTLKRFLQAKKRPKKLFYTSIEGFYIEKDKLREIYQKLGF
                     YEEFKEILEAFLKFYPKAKKGYYRFYFKDCFLDLIFDDIAILRELDFNADVWFLDGFS
                     PSKNSAMFDENFIAQVARLSKTNTQICTFSASSALQKNLIKYGFEIQKTKGFRKREMI
                     KAFLRKEYPTLDKEAYFQRIPSLYKNKKVAIIGSGICGATLAYELSLRDFEVSVFEKN
                     DSLGCGASGNESGILSSLILKPDVALGEFSQLAFIEASRFYKQILDLNLKGVIEFAHT
                     PLMQERFISQKDNILFKIDKNEAFLEDGGHIKPKEILKSLFEKSQAKMYFNHEYDFFQ
                     YQEDKFILHFKNQKAMQDFDILIYAMGADTKDFLVYDGMLLSKVRGQVTHLKPFLDNA
                     FALSSKAYICPSDGDLQVIGASYDRLNSNPNPQKADDEENLQNIQEFLKGDEEIIIKG
                     SRVGFRSYSSDRFAIVGAAYDEAFYKQEYKALLWTKNKAQVLPQNIPNLYLNLAHGSR
                     AFSTSVLAARYLCALINEEPLGVFKNFIPCIHPARFLIRKLKKGI"
     gene            complement(8550..10520)
                     /locus_tag="R8X70_000621"
     CDS             complement(8550..10520)
                     /locus_tag="R8X70_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEF2928425.1"
                     /translation="MFRILVFCIALFSICFGAYENELANFDKNFIASKNDAQVKFHHQ
                     LKSLYIQSVINEDEKTKIEILKRLIISSNALNLDDKSYANELEESGVSKASINALRKA
                     VIKDKQKVQPDSKNVEVSSFEPPKSTSKPPQTKQESTKTQNNKPQQTKKVDKVYVLKS
                     SKTSQGVVLDLNTNLEQKDIKSFALDEKGNYRYISDFEGILEGGRKEYKFDDYCIVIS
                     QYNPKMIRIVAYAKEKIPLNFDFEDEKISISKKSQAIQKSTPSKQESKTAAKQESEKV
                     VAKQESKPVKTQEAKTNTKKEQENDEPLYVLDVDKSSNSVVLNLSDELDEKDITSFST
                     KDQKFFRQVVSFQGILEGSRKNFTFGQNAVTVTQYNPKTVRIVLSSTKEFKLFKDLDD
                     KSLTLGFSGSTSKSTSTSSKSTSKTASKNVLNSNFKSDKLIVLDAGHGGKDSGALSDK
                     KGSLKEKDIVLSTTLKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLFLSI
                     HANAAPSASKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILNFLN
                     REKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGYITH
                     PSEGKRIANKSFQDTLVKGIADGVENYFYNNR"
     gene            complement(10520..11611)
                     /locus_tag="R8X70_000622"
     CDS             complement(10520..11611)
                     /locus_tag="R8X70_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEF2928426.1"
                     /translation="MSLKSLQIGKHTIKYPIFQGGMGLGISWDKLASAVSLNGGLGII
                     SSVGTGYYENRTHISKELNAKPYGSENFYSREGLQTLINNARKVCGDAPLGCNVLCAS
                     NDYARIARDACEVGFNIIVSGAGLPTNLPEFTADFPDVALVPIISSPKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLENLIAPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGASGVQMGTRFIGTFECDASDEFKNVLLACKKEDIELIKSPVGY
                     PARGVRTNLLDLVDKRMGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKET
                     GLFFTGANGYRLEKLISVKELMDKLVNGE"
     gene            complement(11608..12813)
                     /locus_tag="R8X70_000623"
     CDS             complement(11608..12813)
                     /locus_tag="R8X70_000623"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEF2928427.1"
                     /translation="MDIKNILAEIKRGCAEIIDEERIENLIKNYYEKGENFFVKAGFD
                     PTAPDLHLGHSVVLTKMAYLQKHGAIVQFLIGDFTGQIGDPSGKSVTRKKLDKEQVLQ
                     NAKTYEEQVFKILDPQKTQLKFNSQWLNELGATGIVELTSTFSVARMLERDDFTKRFK
                     EQSPISICEFLYPLLQGYDSVALKCDIEMGGTDQKFNLLMGRTLQRIYNIGKEQAVMM
                     MPLLEGLDGVNKMSKSLGNYIGVTEKANDMYAKILSISDELMWRYYELLSTKSLEEIE
                     NMKKEISSGNLHPKLVKENLALEITTRFHNEESAKAAKAEFDSVHSGNALPSDIKEFE
                     IEGEIWLAKALVECGLENSTSAARRSINANAVSVNSQKVSDEQMQLGTGEYILQVGKR
                     KFAKLKVNI"
     gene            complement(12829..15024)
                     /locus_tag="R8X70_000624"
     CDS             complement(12829..15024)
                     /locus_tag="R8X70_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEF2928428.1"
                     /translation="MKPVDEELLLEKLIEDIKNCRDLTRAKELLFSICQEDAIVEKAV
                     DYCIKSHEGQVRKSGEPYAVHPILVASLVAFLSENKATILAALLHDVIEDTQCTEEEL
                     RDQFGSEVLKLVLGLTKIVEIREDNLIPSKSKKSLTKSALTFRNMLLASIEDVGVLVV
                     KLCDRLHNMLTLDALREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNDQQMQLGLNEFISKIELLFLSNGFRQGSFQIQKRIKHSYSIYLKMQ
                     RKGVGIEEVLDLLGVRILVENVSDCYLALGVLHTNFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDTKNIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSTNN
                     LENAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRVKVPLLTELKNGDIVRVVTSNDRFYRCSWVDSVKTGKAKASIREFCKQKMR
                     EINLLSAINMLSFIFSVDKNKIENWIERENLGRRIRQVASDSAYLKDIVNGLKKYAKK
                     SYWFDKYEIKEQKIGNFLLYSNHKIANVDFDYCCHPKRGDAVLAFIENGNAIVHHKLC
                     DRADKMIDNNKDMVLIKWDSNIPKSYKLIFSLENKKGILAEFLAVLAKMQINLLTISL
                     SSDINTVVDYFEITIEIPDNINPDNVRDRLKSYCKILDFTSLNDAYKEA"
     gene            complement(15008..15232)
                     /locus_tag="R8X70_000625"
     CDS             complement(15008..15232)
                     /locus_tag="R8X70_000625"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEF2928429.1"
                     /translation="MENRIEEIAAKALERMGDDRYRLSLVVAKRAEQLADGAAPLVDI
                     DKSKLKFADIALYEIAENKITLEGLVETSR"
     gene            complement(15245..15961)
                     /locus_tag="R8X70_000626"
     CDS             complement(15245..15961)
                     /locus_tag="R8X70_000626"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEF2928430.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIANEIKELVKNNI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESCGLDVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVIFAAGTGNPYFTTDTTAILRAVEIDAQMVIKA
                     TKVNGVYDKDPNKFDDAVFLQTLSYDEAMQDNIKVMDDTAIALAKDNSLPIVVCNMFE
                     EGNLLKIIQGDNSLCSIVKN"
     gene            complement(16013..17215)
                     /locus_tag="R8X70_000627"
     CDS             complement(16013..17215)
                     /locus_tag="R8X70_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEF2928431.1"
                     /translation="MRKILIFLCFFLLSNEMHANAISEKTKNLEENKRIQEQVNKKLE
                     DLANDILSGEKSLKELSAQIETLNSQTLKLEARAKAQNKDLNLLTSQNTDLLKNKANM
                     EGKLIALMAKDFAHDLPIPQGYVESKESFMAFEVLGGLDKILQDEIFKLSKDYEDISK
                     LIDDKQEQIKKINEDLKDYNTQLAKLQNLRQKQLSEIKKQKTDRAIYAKKLENLQDQQ
                     DELRKTLNQLKIIESKQEDKKQSQKTASDSKIVNNTQKIRQIGSSYQGSSTKRYTGKK
                     TIAPLESFTVKQKFGNYIDPVYNIKIFNENVVLRSNKADAVVKSVLDGKIVFAKDTSM
                     LARVVIVEHDNGIHTIYAHLDKIAPNIKVGKNVKKGAVVGRIKNDLTFEVTQKNFHIN
                     PLELISLN"
     gene            complement(17212..18018)
                     /locus_tag="R8X70_000628"
     CDS             complement(17212..18018)
                     /locus_tag="R8X70_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2928432.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILLTNATLRHYEELVNKDYNI
                     IVASSAELDKNVIKTKLSSFSNLEPLDPKDLIDRLKNDISDKNLKVLRDSLPKFYSIK
                     LDYLPTQNELNTIKNQLLSIPSISKVETFAKTHDKVYSLLVLMKFVFWLFLFIIILLS
                     FVLFLKQMRIWLFEHTERVEIMCLFGAPFWFRSFMLYKIVVLDCFIAFIILFVFFTQI
                     YNLSIVQDSLKAVDIILPPINFIVHLGVIFLVTLFICLFCVNSVMFRVKK"
     gene            complement(18005..18670)
                     /locus_tag="R8X70_000629"
     CDS             complement(18005..18670)
                     /locus_tag="R8X70_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928433.1"
                     /translation="MSNLIQAHKLSLGYDELVIKEASFTFKDDDFVFITGKSGSGKST
                     LLKSFYGDLELLSGQLEVCGSSMRKIGNSELLKLRQQIGIIFQDYRLIQEYSVEKNVM
                     LPLMIKGYSKKVCHDQASKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVVVVTHRIPSNLRLNYRRFNIENGNMN
                     EIF"
     gene            complement(18719..19915)
                     /gene="trmB"
                     /locus_tag="R8X70_000630"
     CDS             complement(18719..19915)
                     /gene="trmB"
                     /locus_tag="R8X70_000630"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEF2928434.1"
                     /translation="MPNFKTRKLKEIILPFEKDGVEFVWMAHNDNVNLIYTRVEEESF
                     FLQIKKGENEFVVKVDKHTKPSKIAYLHKALYIFKQYFCEDVISEAFGIKNNALAEKT
                     PLIANDFEEVLERLEGKIYIEIGFGSGRHLLYQAKNNPQILILGIEIYNPAITQVAKL
                     ARAQGIDNILLVQSDARLLLSILRSDSIEKIFLHFPVPWDKKPHRRVVSKAFCKECAR
                     VLTTQGVFELRTDSYEYFDFTFKEFLEFSSPQFSIRKNENLEISSKYEDRWKRQEKDI
                     YDLWVWNLDKEEKNVLSEEFDFSDIHLSKNDLMLLEKNFENFTLKKEDFFLHFENIYK
                     QGESLLLKIAFGAFNKPEHCYLHIGEAISFVFKEPFKIQENLKAIKKLKKSVKFHFNM
                     KHFLEN"
     gene            complement(19915..21147)
                     /locus_tag="R8X70_000631"
     CDS             complement(19915..21147)
                     /locus_tag="R8X70_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEF2928435.1"
                     /translation="MKKFHLSLCLGALTLLFSACSVSQLSNIGSNKELLVNESLPKIN
                     NLKSLSDISNIAFEWDPLYDDNIKGFYLYRSNDANPEFKLVGTIKNKFQTHYVDAKLE
                     PNTKYYYMMRSFNDQGHISEDGKVIEVKTMPRLEAIPFAQAITNLPSRIKLIWRPHPD
                     PRVASYIIERAKADGQEFKKIAEVKNRLNAEFIDEDLKPEESFNYRIIAVGFDGVQSQ
                     PSSILNSTSKALPPQVEHLNASLDGANKVVLTWDAPKYKDFSYYKVYSTSSSFLPYTL
                     LAKTEQNSYEDIVEGAAKSKYYKVTMVDIDELESPMPKDGVEGKTLGIPSSPSIILAQ
                     STSDGIDLEWVDNDSRAVEYEVRRYGGDQNAIFKGIKEKRLKDIKALPGVEYSYEVIA
                     IDSVGLRSEPSKKVKAKQ"
     gene            complement(21095..22060)
                     /locus_tag="R8X70_000632"
     CDS             complement(21095..22060)
                     /locus_tag="R8X70_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEF2928436.1"
                     /translation="MQTFLVDEPSRLDIFLAKNLQQSRNQIASMIEKNCVWVNDKIQN
                     KNSFKLKVGDKLVLNLPLVEEAKPKFDIDFDIEILYEDEDLLVLNKPSNLVVHGAKSV
                     KSATLVDWLIEKQYTLSTLGGEVRAGLVHRLDKETSGAILIAKNNFTHQKLSEQLSDK
                     TMGRIYLALIDLPLKEDKIIIDKALIRSSANAIKKIVTNSFVKGSKEAKSAFVNLAKS
                     EEVSLIGAKLFTGRTHQIRAHLASINRHILGDELYGYRGKYECRIMLHAYFLYFIHPR
                     NGEKIFIQAPLMDDFKQILEKKFILGELNEKISLESLLGCFDSFI"
     gene            22139..23239
                     /locus_tag="R8X70_000633"
     CDS             22139..23239
                     /locus_tag="R8X70_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEF2928437.1"
                     /translation="MFIPDRRILTHFDYMQPILFVPIILISFFLIFEANAFLAEKQFV
                     YACVGIAAFSVFFLLPIRKLMWLIPIAYWVNIFLLLSTDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQDPPPKNGYKLKQFLKLSFFIILPFLLIAQEPDLGS
                     AMVLLIVGFGVLFIMGVHYKIWLSIIIAIGISSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGGLIGKSQDEATQTHFNFLPISTSDFIFAYLIERFGFLGGFVLILL
                     YTLLIFHLLSLNQKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWVDNKNK"
     gene            23290..23366
                     /locus_tag="R8X70_000634"
     tRNA            23290..23366
                     /locus_tag="R8X70_000634"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23324..23326,aa:Ile,seq:cat)
     gene            23587..24786
                     /locus_tag="R8X70_000635"
     CDS             23587..24786
                     /locus_tag="R8X70_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEF2928438.1"
                     /translation="MIIVNDKQLKTLIVKKRTYIKDACTKNLYIEAKDSLKGTIIFFY
                     FRYRLNKKIQSIKIGKYPTTTLSSAREKANIFNDMLAQKIDPKEQIQDKGVKKSKTVK
                     EIFQEWSQVFYKNNTSYNLSKRLETHIISKYEDKHIDELAKNDILLVLDKLYVEGKLE
                     TIKRVFLGLKKMLMYAINKEYIENSNILTLDMKALYGSPKKQNLRAITKEERFKELLL
                     AIENYNGSIFTKVALQISPYLFLRSTNIRNLEWSEIDFKNLKIIIPANKMKGGEDFII
                     PLSESVIKLFEFIKPFSFHNSKYVFPSDISKSKTMSENTLNQAIKRLGFGDEMVFHGF
                     RTTASTLLYEFKNLHGQDSEVIELCLDHRERNNVKATYNRSLRLNDRKLLMQYWSDYI
                     DKLKGII"
BASE COUNT         8142 a         4642 c         3417 g         8595 t
ORIGIN      
        1 acaaaatgat taatgtgttg atgatagaag atgatcctga ttttgcccaa ttattgtcag
       61 aatatttaac tcaatttaat atcaaaatca caaattttga aaatcctaaa gaagctttaa
      121 atgtaggtat acaaggctat gattgtttaa ttttagattt aaccttacct ggaattgatg
      181 gccttgaagt ttgtagagaa atcagacaaa aatacaatat tcctatcatc atttcatctg
      241 ctagaggaga tttaagcgat aaggttgtag ggctccaaat tggcgcggat gattatttac
      301 caaaacctta cgatccaaaa gaaatgcacg caagaatcat gagtcttatt cgtcgcacaa
      361 aaagagctga aaataccaac aatgaaaata tcaattcagc ttttaaaatc gatgaaagaa
      421 aacacgaaat cacttatcaa aacaaagtct taactctaac ccctgcggaa tatgaaattt
      481 tagaatatct catccagcaa cacggctata gtgtatctag agaacagctt gtaagtcgct
      541 gtaaaaatct taaagataaa gattctaaaa gccttgatgt tatcatcggt cgcttaagaa
      601 ctaagataaa tgatagctct aaagctccaa aacatatatt ttcagttaga ggtataggat
      661 ataaacttat aggatgacta gaaattattc tatttatacc aaacttgtta ttttatttgt
      721 tgtaactttc tttttggttt gcgttttatt tatcgtgctt ttaaaaatag aaagcaatac
      781 ctacagcgaa gaagaaggtt ttaaacaaga aagttttata aaaaatatca tcaattctta
      841 tggcaatgct tctggagtgg atataggagc tcatcttaac aatagcggct ttgttgctat
      901 acaaaatgat tattttgtaa aaatcgcaag actagaagga caaagccttt ttcgcgcagg
      961 aaatggagaa aatgcctgca ctctcacctc tttaaaatat caaaacaaac tctatcttga
     1021 tgtccaatgc aaagacttta gcgctttatt tgaagaagat actaacaata gagtttataa
     1081 tcttttgttg ataggctttt tctttttttc ttttttggtt gtttttatgt atttttcagt
     1141 attaaaatcc cttgaaccac ttaaaaaatt aagaaaacag gtcgcagaag tggctaatgg
     1201 cggaaaagct gattttgaga attatcaaga agatgaagta ggtaaaatag cccttgaatt
     1261 tcaaaaagct tttaagaaaa atcaagaact catacaatca agacaacttt ttctacgcac
     1321 catcatgcat gagcttaaaa cgcctattgg aaaaggtagg attatatctg aaatgctgca
     1381 agaagaaaag cagaaagaaa gattgatcga tattttttta agaatggatt cgttgattaa
     1441 tgaatttgcc aaaattgaaa atcttttttc aaaaaactac aatcttcagt ttaaacctgt
     1501 gcattttagc accatactca atgaagctaa agattatttg atgcgtgatg attttaatag
     1561 agtcgtcaag ctcaatttaa aacacgatgc cttgattaat gtagatatgg aaatttttcc
     1621 tttgatttta aaaaatctca ttgataatgc tttaaaatat tctagcaatg gaacttgtga
     1681 gctttattgc tgtaaagaat gttttgtgat aaaaaatcct ggcaatccat taagagaacc
     1741 tatagagcat tattttgagg cttttacacg cgaaccatat cagaaagtca aaggtatggg
     1801 cttaggactt tatatcgttt ttgaagtatg caaactacat aattttgata ttatttattt
     1861 ttacgaagaa ggtaagcatt gttttaaaat ttttttcgga gtaaaaacaa acaatgacgc
     1921 ataagggtat agaaaaattt aacgaacttg tagaaagttt tgcaaaatta cccactatcg
     1981 gtaaaaaaac tgctattcgc cttgcttatc atatttgcac aggaaatcaa ctcgaaggta
     2041 tgaagctcgc acacaatata gaaaatgcta tacgctttat aaaaccctgt caacaatgcg
     2101 ggtctttaag cgaaaacgaa ctttgtgaaa tttgcaccga tgatgaaagg gataaaaatt
     2161 gcttatgtat agtgcaaagc cctaaagatg ttttggttat agaagagagt aaaagttatg
     2221 ggggcttgta ttttgtttta gatgaattaa acgatgaaaa gcttgctcaa ttaagacaaa
     2281 tgatactaaa attacaaagc aaagaactca tttttgcttt cactcataat ttaaattccg
     2341 atgcaatgat tttttatata gaagataggc ttaaagattt aaatttacaa tttagcaaaa
     2401 tcgcacaagg tattccaagt ggagtaaatt tagaaaatgt tgactttata tctctaaaca
     2461 aagccatcaa ttttcgcacc aaagtttaaa tcagtttttg taagaaatgt cagctaattc
     2521 ctgcaaagaa tgatttgcta ttttttcata actaaaaccc tctttagtta aatactcaag
     2581 caaagttttt tccataattt cacccgcgct aacaatctct tgcgatagag taaaactcat
     2641 aggcttgata cgctttggaa cacaagctaa aatttgtgta tgaggcaaat ctcccattag
     2701 ctccatatat tgtaaggttt gaagcatttc tacttcgtgc gcactaccac tccaattgat
     2761 ctttttaggc attgcatcat aaggaaagaa aaatacatcg ccgatttttg aatcatctgc
     2821 atctatacaa tcaagcacta tcatcttatc atactctgcg ataatatagc taagttgcaa
     2881 ggccaaggtg cctccatcga caaaatctaa gctgtgattt gaatgagtga atttataatt
     2941 tttttctaaa agtttgcaaa gatgaacgcc tatgccttca tctgcaaaca taatatttcc
     3001 tataccaagg acaagaaatt tcaatttttc tcttctttaa caaatttata accgctaact
     3061 atagcatcaa tcgcaccatc tttacctttg atcgcattga aaaatgccat gtagatatga
     3121 acgggtacga agattaaaat aacccacatt aaaattctat gataagttct aacatcagcc
     3181 aagcctccaa gtgcggcttc taaaggtctt aacacttcat acaacaatcc tcccaaaccc
     3241 tcatggtaag tatgagtata aagaatcaat cctgttaaaa taatccccac cataacaata
     3301 tagaaaaata tataggttac aaactgcaaa ggattataaa caccttttag atgtggatgc
     3361 ttacctaaaa atagataaaa tttaatctgc tctatccata attttggatt aagtgcatct
     3421 actatgctga tacgctcctt acgacttatc ctatcaaaaa agaaaagata aactttaaaa
     3481 atcacacaag caatcaaaac aaaaccgacg gcttgatgca ccattctgta ttttgcttgc
     3541 atgaaattaa ctggctcacc attgcttata ggattttgaa aaacataaga aagataatat
     3601 cctgttataa ccaaaaccac tatagcaaaa gctcttaccc aatgtgttaa acgcaaacct
     3661 atgctaaatt catattcagc ctttctttgc aatttttctt ctttattttg cataaaagcc
     3721 ccttttataa actcgcgttt actttatatt cgcttagatt atttccctta gtatccatta
     3781 catgcaccgc acaagcaata caaggatcat aagagtgaat ttttctaatg atttcaagtg
     3841 gttgttttac atcagcaatt tttaatccta tcaaacattg ctcatagctt ccgcccacac
     3901 cattagcatc ttttggactt gcattccaag tagaaggaac aactgcttgc caattttcta
     3961 tcactccatt tttaatcctg caccaatgac ttagcgttcc gcgtggcaca tgccccatat
     4021 agcgtccttt gtactcttta gaattatcga tcacataagg cgcacaagtg ctctcatcta
     4081 cttttaaatt ttctactaaa ttacggaagg cttttaaagc attattagcc acaatttttg
     4141 cttccaaaca acgcgcagca gttcttccaa gagtgctaaa tacagcattt aaaggaagtc
     4201 ctgtttcttt taaaaactca tctaccacag gaacaacatt ttgattaccc ttagcataat
     4261 ttacaacgat attagccaaa ggtcctactt gcataggatt tccttcatag cgtggagcct
     4321 taatccagct atatttaccc ttagtatcaa ataccttaga atgcactgta tttccatgat
     4381 gatctacact ttcaccctct acaagccctg tataatttgg atttgtttta ccctcataag
     4441 gatgcaaagg ctcattatct gcataccaag aatgggtcgc ttcttcagtg atcttatctt
     4501 cttctacttc atataccttg cttaaatcgc catttttgat gattccgctt tcaaatagcc
     4561 actcatctct accaagctgg aattcttgga aagtgtaaag attgtttacc ccaatatcat
     4621 ttagcacact aggttcatct gcataagctt ttcccgccat aacaagatca ggataatacg
     4681 cacgattaac aaagtcttgc acttctttga atttttccat atattcaccc attctagcag
     4741 ggcttagcaa atccataacg caagttacac caccaacggt taagctttgt ggatgtggat
     4801 ttttagcacc aaaaatagcc atacattgag ctatgattct ttgaattctt aaacactcta
     4861 aataatgcga taaaacgatc aaattttgct ctggagttaa gcgataagta ggatgaccat
     4921 aataagcatt tgcaaaaggt cctaaatttc ctttatctac aaaagtttta agtctttgtt
     4981 gcacttcaag aagtttatct gcacctgttg cataaggatt tgaagtgtat ttaaaagcct
     5041 catcacttgc ttttttaaca tcagcactta aagcacttac aacatctgcc caatcaagcc
     5101 catggagttg ataaaaatgt acgatatgat cgtgtaagaa aagcgctgca ttcattaaag
     5161 ttcttgttaa aagcgcattt aaaggcggag taatacctaa agcattttca acagcaacta
     5221 tacctgcttt ataatgtgaa aaagtacaaa ctccgcaaat tctttgcgtc ataaaacccg
     5281 catctcttgg gtcacgccct ttaacaatgg tttcaatacc acgccacaaa gtagagcccg
     5341 cataagcttc ttttaccaca ttgttatcat caacaacaac ttcaaccctt aagtgtcctt
     5401 ctattcttgt aattggatct actattatct tttgactcat gtattttatt cctcattctt
     5461 tttcatggat gcgatcaccg catgcgctgc gatagcaacg cctgtaagcg ttagaacacc
     5521 tatgcctatt ttatctgata cattatcagc tcctaatcca aaaacagtat caaatttacg
     5581 acttgccata ggctcttcaa aaggtcccat agtatcccaa aaatttggct cagaacaacc
     5641 tatacagcca tgtcctgctt ggataggcca agaagtgtgt tggttaaatc tttctctaga
     5701 gcagttatta aaagtataag gacctttaca acctacttta taaagacaat aaccattttt
     5761 tgcaccctca tcgccaaagt tttgtacaaa ttcacccgca tcaaaatgtc cgcgtctttc
     5821 acaaagatca tgaattctta aaccataagc ccattttggt ctattataaa catcaagcgc
     5881 aggtaactca ccaaaaagaa gataatgtaa aacatttcct actatgtttt tttcacttgg
     5941 cggacaacct ggcacgttga taacggtttt gcttgttacc ttgcttagag gttgagcatt
     6001 gcttggattt ggtcttgcag cttgaattcc gccaaagctc gaacaggttc ctatcgcaaa
     6061 aatcgccaaa gcattttcac tcgctacttt agaaagctca tatccactct ttccatgtgg
     6121 ccctatggtt aaaaaattct ctgtatctcc catagggata ccaccttcaa ccattaaaat
     6181 atacttgttt ttatattttt caatggcact ttctaaattt tcttcagcct gccaacccgc
     6241 tgcagccata acggtttcat ggtattctaa agaaatataa tcaaatatta agctatcaat
     6301 agttggagta tcacttctta ataaactctc gctacagccc gtacattcag ccatatgaag
     6361 ccaaatcaca ggaagtctat ctgcaagttc tgcagctttt gccaccatag gggtaaaact
     6421 cgctggcaat gctaaaaatg ctgtcatcgc ccctgcccat ttcataaaat ctcttctagt
     6481 aaagccagat ctttccaaag cttttggtat agaattttca ggatttaaag aaggaagttt
     6541 ctcaagtgcg cttaaacggg actctatttg attataatca atcattgaaa ttccttaatt
     6601 aatgtaattt attccactta ataataaaac aaagcaaatt aaaaatgtat taaaatttaa
     6661 atttcaatag aaaaatataa acaaaactta aagatatatt aataaaagct aaaaaattta
     6721 tatccctttc tttagcttgc ggatcaaaaa tcttgcagga tgtatacaag gaataaaatt
     6781 tttaaacacc cccaaaggct cctcgttaat caaagcacaa agatatcttg cagccaaaac
     6841 agaagtgcta aaagctcttg agccatgagc aagattaaga tataaattag ggatattttg
     6901 aggcagaact tgcgccttgt tttttgtcca taataaagct ttatattctt gcttataaaa
     6961 agcttcatca taagctgctc ccacaatagc aaacctatcg ctagaataag atctaaaacc
     7021 tactctagag cctttgatga tgatttcctc atcgcctttt aaaaactctt gtatgttttg
     7081 caaattttct tcatcatcgg ctttttgtgg atttggattt gaattcagcc tatcataact
     7141 tgcgccaata acttgcaaat ccccatcact aggacaaata taagcttttg aagaaagggc
     7201 aaatgcatta tccaaaaaag gttttagatg agtaacctgt cctctaacct tacttaaaag
     7261 cattccatca taaactaaaa aatccttagt atcagcaccc atagcataga ttaaaatatc
     7321 aaaatcttgc attgcttttt ggtttttaaa atgcaaaata aatttgtctt cttggtattg
     7381 aaaaaaatca tattcgtgat taaaatacat ttttgcttga cttttttcaa aaagagattt
     7441 taaaatttct ttaggcttga tgtgtccgcc atcttctaaa aaagcttcat tcttatcaat
     7501 cttaaataaa atattatctt tttggcttat aaaacgctct tgcatcaaag gagtatgagc
     7561 aaattctatc actcctttta gatttaaatc taaaatttgc ttataaaaac gactcgcctc
     7621 gataaaagca agttgagaaa attcacccaa agcaacatca ggctttaaaa tcaaagagct
     7681 taaaattcca ctttcattgc cacttgcgcc acatcctaaa ctatcgtttt tttcaaaaac
     7741 actgacttca aaatcacgca aagaaagctc ataagctaaa gttgcaccac atatgcccga
     7801 acctatgatg gctacttttt tatttttata taaacttgga attctttgaa aataagcttc
     7861 tttatctagg gttggatatt ctttgcgtaa aaaagctttg atcatctctc gctttctaaa
     7921 acctttggtt ttttggattt caaagccata ttttataaga tttttttgca aagcactcga
     7981 agcagaaaag gtgcaaattt gggtattagt ctttgaaagt cgagcaactt gagctatgaa
     8041 attttcatca aacatggctg aatttttact cggagaaaaa ccatctaaaa accaaacatc
     8101 agcattaaaa tcaagctctc taagaatagc aatatcatca aagattaaat ccaaaaaaca
     8161 atctttaaaa taaaaacgat aatacccttt tttagcctta ggataaaact ttaaaaaagc
     8221 ttctaaaatt tctttaaatt cttcataaaa tccaagcttt tgataaattt ctctaagctt
     8281 gtctttttca atataaaaac cctcaatgct ggtgtaaaat aattttttag gacgcttctt
     8341 tgcttgaaga aatcttttaa gggttaaaaa gaaattaagc cctataccaa agccactttc
     8401 agcaatgata aatgtatcat tttcttcaaa ttcaaaagcc tcactataaa caaatttgct
     8461 ctcatttaaa ccatcttttg agttaaaata aaaatcatca aaatccaaag aaaatggggt
     8521 attgtcttta aagattaaat tagctttttt catctattgt tataaaaata attctccaca
     8581 ccatcagcta tacccttaac caaagtgtct tgaaaacttt tatttgcgat tctttttccc
     8641 tcacttggat gagtgatata tccaatttct atcaaaatag caggcatttg agctccaaca
     8701 agaacccaaa aaggagcttc tcttactcca ccatcgacaa ttttatactt cttacgagtt
     8761 tgggttaaga tatttttttg cacatctata gcaagtttgt ttgaagccac gatcttttct
     8821 ctgtttaaaa aattcaaaat actttgcttt gaaaaataat taatctcttc aaaatcaccc
     8881 tgattttctt tttcagcagc ttttttactt ctttcacttc tagcaggact taagaaaaaa
     8941 gtctccacac cctcactgct ttttgctttt gatgcactag gcgctgcatt tgcgtggata
     9001 gataaaaaca aatccgctct tttatcattg gcatattttg ttctatctct aagattgata
     9061 aatttatctg aacttcttgt ataaagtact ttataaccgc gttttttaag ctcatttcca
     9121 agctttaagg tcgtgcttaa aactatatct ttttctttta aactcccttt tttatcgctt
     9181 aaagcaccgc tatccttacc cccatgtcct gcatctaaga ctatgagttt atcggatttg
     9241 aaattagaat ttaaaacatt tttactagca gtttttgaag tgcttttgct tgaagtagaa
     9301 gtgcttttgc ttgtactgcc actaaaacct aaagtcaaac ttttatcatc taaatcttta
     9361 aaaagcttaa attctttagt tgagctgagt acaatacgaa ctgtttttgg attatactga
     9421 gtaactgtaa cagcattttg cccaaaagta aaattcttgc gactaccttc taaaattcct
     9481 tgaaagctca ctacttgtct aaagaatttt tgatcttttg tgctaaaact tgtaatatct
     9541 ttttcatcaa gctcatcgct taaatttaaa acaacagaat tagaactttt atctacatct
     9601 aaaacatata aaggttcatc attttcttgt tcttttttgg tatttgtttt agcttcttga
     9661 gttttaactg gtttggactc ttgttttgcg actacttttt cactttcttg ttttgctgct
     9721 gtttttgact cttgcttact cggagtactt ttttgtatag cttgtgattt tttagaaata
     9781 cttatttttt catcttcaaa atcaaagttt agaggaattt tttccttagc ataagcaacg
     9841 atacgaatca tcttaggatt gtattgtgaa attactatgc aataatcatc aaatttatat
     9901 tcttttcttc cgccttctaa aataccctca aaatcactga tatagcgata atttcctttt
     9961 tcatccaagg caaaactttt tatatctttt tgctctaaat tggtatttaa atcaagtacc
    10021 actccttgac ttgtcttact tgattttaaa acataaacct tatctacttt ttttgtctgt
    10081 tggggtttat tgttttgtgt ttttgtgctt tcttgtttgg tttgtggggg ttttgaagta
    10141 cttttaggag gttcaaagct tgaaacctcg acatttttag aatcaggctg aactttttgc
    10201 ttatccttaa tcacagcttt tcttaaagca ttgatgctag ccttactcac tccgctttct
    10261 tctaattcgt tcgcataaga tttatcatcc aaatttaaag cattagaact tataatcaat
    10321 ctttttaaaa tttcaatttt agttttttca tcttcattga tcacactttg tatataaaga
    10381 ctttttagct gatgatggaa cttaacttga gcatcatttt ttgacgcgat aaaattctta
    10441 tcaaaattag caagctcatt ttcatatgcc ccaaaacaaa tactaaaaag tgcgatacaa
    10501 aaaactaaaa ttctaaacat tattcaccat tgacgagttt atccataagc tctttaacac
    10561 tgattaattt ttctaaacga tagccattgg ctcctgtaaa gaataatcct gtttcttttt
    10621 ttcccgacca tgcatcaaaa agcctatctg ctatacaata acccaccttt gtcgcctctt
    10681 tacctcggcc acatggcgct acacaattgc tgatacaatt gatctttggt cccattcttt
    10741 tatcgactaa atcaagtaaa ttagtcctta ctcctcttgc aggatatccc actggagatt
    10801 tgataagttc tatatcttct tttttacatg caagcaatac atttttaaac tcatcacttg
    10861 catcgcattc aaaagtacct ataaaacgag ttcccatttg aaccccgcta gcacctaaag
    10921 aaatggcatt ttctatatct tttttatccc aaattccacc cgctgcaatc actggaaaag
    10981 aaccccaatt tttagcctct tcaaccacag gtgcgattaa attctcaagt tgataattag
    11041 gatctaaaca ttgctcatag gtaaaacctt gatgtccgcc gctcttaggt ccttcaagca
    11101 caacagcatc aggcagacgg ttgtatctac tttgccatct tttacagatg atttttaaag
    11161 ccttaggtga agagattata ggaactaaag caacatcagg aaaatctgct gtaaattcag
    11221 gtaaattggt aggaagtcca gcacctgaaa ctataatatt aaaacccact tcacaagcat
    11281 cacgagcaat tcttgcataa tcattacttg cgcataaaac attacaaccc aaaggcgcat
    11341 caccgcaaac ttttcttgca ttatttatca aagtttgtaa gccttctcgt gaataaaaat
    11401 tttcactacc ataaggctta gcattcaatt ctttgctaat atgggtgcga ttttcataat
    11461 atcctgttcc aacagatgag atgataccaa gaccgccatt taacgacact gctgaagcca
    11521 atttatccca gcttatacca agccccattc caccttgaaa aatgggatat tttatagtgt
    11581 gttttcctat ttgaagggat tttaaactca tatattcacc tttaattttg caaattttct
    11641 cttacctact tgtaaaatat actcccctgt gccaagttgc atttgctcat cgcttacttt
    11701 ttgtgaattt acactcaccg catttgcatt aatgcttctt cttgctgcag aggtagaatt
    11761 ttccaaaccg cattctacta aagctttagc aagccaaatt tcaccctcta tctcaaattc
    11821 ttttatatcg cttggcaaag catttccgct atgtacgctg tcaaattcgg cttttgcagc
    11881 cttagcgctt tcttcattgt gaaaacgcgt agtaatctct agcgccaaat tttccttaac
    11941 aagcttagga tgtaaattgc cactagaaat ttcttttttc atattttcaa tttcttctaa
    12001 acttttagta cttaaaagct cgtaataacg ccacattaac tcatcactaa tgcttagaat
    12061 tttagcatac atatcattag ctttttctgt aacgccgata taattcccta agcttttact
    12121 cattttattt acaccatcta agccttctaa aagaggcatc atcatcacag cttgttcttt
    12181 tccgatattg taaattcttt gcagggttct tcccattaag agattgaatt tttgatctgt
    12241 tccgcccatt tctatatcgc attttaaagc aacactatca tatccttgaa gcaaaggata
    12301 taaaaactca catatagaaa tagggctttg ctctttaaaa cgcttcgtaa aatcatcacg
    12361 ctctagcatt cttgctacac taaaggtcga agtaagctct actatcccag tagctcctag
    12421 ttcgttaagc cattgagaat tgaattttaa ttgtgtcttt tgcggatcta aaatcttaaa
    12481 tacctgctcc tcataagtct tagcattttg taatacttgt tccttatcaa gttttttacg
    12541 cgtaacgctt tttccactag gatcgccaat ttgtcctgta aaatcaccga ttaaaaattg
    12601 aactatagct ccgtgttttt gcaaatatgc cattttggtt aaaaccacac tatgacctaa
    12661 atgcaaatca ggtgctgtag gatcaaatcc tgcttttacg aaaaaatttt ctcccttttc
    12721 gtaataattt ttaatcaaat tttcaattct ttcctcatcg atgatttctg cgcaccctcg
    12781 tttgatttct gcaagtatat tttttatatc cattttctac cttttagttt aagcttcttt
    12841 ataagcgtca tttaatgaag taaaatctaa aattttacaa taagatttta acctgtctcg
    12901 gacattatca ggatttatat tgtcaggaat ttctatcgtg atctcaaaat aatccaccac
    12961 tgtattaata tcacttgaca aactaatcgt taataaatta atctgcattt tagccaaaac
    13021 tgccaaaaac tctgctaaaa ttcctttttt attttctaaa gaaaagatta atttgtatga
    13081 tttagggata ttagaatccc atttaatcaa aaccatgtct ttattattgt ctatcatctt
    13141 atctgcccta tcgcagagtt tatgatgaac tatagcattt ccattttcaa taaatgcaag
    13201 tacagcatcg cctctttttg gatgacagca gtaatcaaaa tccacattag caattttatg
    13261 attagaatac aataaaaaat tcccaatctt ttgttctttg atttcgtatt tgtcaaacca
    13321 ataagatttt ttagcgtatt ttttaagccc attgactata tctttcaaat aagcactatc
    13381 actggctact tgtcgtatgc gtctgcctaa attctctctt tcaatccaat tttctatctt
    13441 gtttttatct acactaaaaa taaaacttaa catattaatc gcgcttaaaa gattgatttc
    13501 tctcattttt tgcttacaaa attctcttat gctcgctttt gcttttcctg tttttacact
    13561 atcaacccaa gaacaacgat aaaacctatc attggaagtt acaaccctta ctatatctcc
    13621 atttttaagc tcggttaaaa gagggacttt tacacggtta acataagcac tttttgcatg
    13681 aagtcctact ttagtatgca cctcataagc aaaatcaagc acagtagctc ctcttggcaa
    13741 agtaaaaatt tcaccctttg gagaataaac agccacatct tctacataaa gactatcttt
    13801 tgcatactca taaagctcga tagcattata atcttctgcg ttttcaagat tgttcgtact
    13861 ttgcatcgaa atatcagtaa gccaatcaag tcgcggggct acaacactcc catcttcttt
    13921 gtatttccaa tgtgcagcta taccaaattc agcgatttta tgcatatcaa aagtacgaat
    13981 ttgtgcttcg ataatatttt ttgtatcaaa aagagtggta tgtatagttt gatagccatt
    14041 ttgttttggt aaagctatgt aatctttaaa acgcgaaacc aagggattaa aatttgtatg
    14101 caaaacccct aaagccaaat aacaatcgct cacattttca accaaaattc gtacaccaag
    14161 caaatcaagt acctcttcta tacccacacc ttttctttgc attttaagat agatagaata
    14221 actgtgtttg atgcgttttt gaatttgaaa acttccttgc ctaaagccat tgctaagaaa
    14281 taaaagctcg attttagaaa taaattcatt aagtcctagt tgcatttgct ggtcgtttga
    14341 attaatataa ttatcgataa gcttatactc atcaggcatc aaatacttaa agcttaaatc
    14401 ttctaaataa ttcttaatac tagaaattcc aagtctatgt gctatgggtg cataaacgac
    14461 caaagtttct tcgctaatac gcttttgctt atcttctctt aaagcatcta aggttagcat
    14521 attgtgaagt ctatcgcaaa gttttaccac caaaaccccg acatcttcaa tacttgctaa
    14581 aagcatattt ctaaatgtaa gagcggattt ggttaaactt ttttttgatt ttgaaggaat
    14641 gagattatct tctctgattt ctacaatctt tgtaagacct aaaacaagct ttaaaacttc
    14701 ggatccaaac tgatccctaa gttcttcttc ggtacattgc gtatcttcga tcacatcatg
    14761 taaaagcgca gccaaaattg tggctttgtt ttcacttaaa aaagcaacca agcttgcaac
    14821 caagatggga tgaactgcat aaggttctcc gctttttcta acctgacctt cgtgggactt
    14881 tatgcaataa tccacagctt tttctacaat agcatcctct tgacaaatgc taaaaagaag
    14941 ttcttttgct cttgttaaat ctctacaatt tttaatatct tcaatgagtt tttcgagcaa
    15001 taattcctca tcgactggtt tcaactagac cctctaaagt gattttattt tctgctatct
    15061 catataaagc aatatctgca aattttaatt tacttttatc aatatccact aaaggtgctg
    15121 caccatcggc taattgttct gctctttttg caacaaccaa agaaagacgg tagcgatcat
    15181 ctcccattct ttctagagct ttagctgcta tttcttcgat tctgttttcc attagttctc
    15241 cttattaatt tttaactata gaacaaagac tgttatcgcc ttgtataatt ttaagcaaat
    15301 ttccttcttc aaacatatta catacaacta taggcaaaga attatcctta gctagagcga
    15361 ttgcagtatc atccataact ttaatattat cttgcattgc ctcatcatag cttagggttt
    15421 gtaaaaatac tgcatcatcg aatttattag gatctttatc ataaactccg tttacttttg
    15481 ttgctttaat aaccatttgt gcatcaatct caaccgctct taagatagct gttgtatcgg
    15541 ttgtaaaata aggatttccc gttcctgcgg caaagattac aaccctacct ttttctaaat
    15601 gtctttgagc tcttctcata atataagttt cacaaaaagc ttccatttga atcgcacttt
    15661 gtactctcac atcaagtccg caactttcta aagcctcttg aatagcaata gcattaataa
    15721 cagtcgcaag cattcccatg tgatcgccgc ttgtgcgttt gataagaccg cctttggccg
    15781 ctgaaacacc gcgaatgata tttccacccc ctatcactat gcctacttct atattgtttt
    15841 taaccagttc tttaatctca tttgctatga attttaaaat agaattttca ataccaaaac
    15901 cattttctcc ggctaaagct tctcctgaaa attttactaa aactcttttt ctctcttgca
    15961 ttttttctcc ttaatcaact tgaaattata ttgaaaattg cattaaaatt agctaattta
    16021 aactaataag ttctaaagga ttgatatgaa aattcttttg tgttacttca aaagttaaat
    16081 cattttttat cctacccact accgcacctt tttttacatt tttaccgact ttgatattag
    16141 gtgctatctt atctaagtgt gcataaatag tatgaattcc attatcatgt tcgactatca
    16201 caactcttgc tagcatactt gtatctttgg caaaaactat ctttccatct aaaacacttt
    16261 tcactacagc atcggcttta ttgcttctta aaacaacatt ttcattgaaa attttaatat
    16321 tataaacagg atcgatataa tttccaaatt tttgttttac agtaaacgat tctaaagggg
    16381 ctatagtttt tttacctgta taacgcttag tagagcttcc ttggtagcta gatccaattt
    16441 ggcgaatttt ttgagtatta ttgacaattt tgctatcgct ggcagttttt tgactttgtt
    16501 ttttatcctc ttgcttgctt tctataattt ttaattgatt taaggttttt cttaattcat
    16561 cttgctgatc ttgcaaattc tcaagttttt tagcataaat tgcccgatcg gttttttgtt
    16621 ttttaatctc actgagttgc ttttgtctta aattttgaag ttttgctaat tgggtattgt
    16681 aatcttttaa atcttcatta atttttttaa tttgttcttg cttatcatcg attaatttac
    16741 ttatatcttc ataatcctta gaaagtttaa aaatttcatc ttgcaaaatt ttatccaagc
    16801 cacccaaaac ctcaaaagcc ataaaacttt ccttgctttc aacataacct tgcggtatag
    16861 gcaaatcatg ggcaaaatcc ttagccatca aggctataag tttgccttcc atattggctt
    16921 tatttttcaa aagatctgtg ttttgacttg tgagtaaatt taagtcttta ttttgtgcct
    16981 tggctcgagc ttcaagctta agagtttgag aattaagagt ttcaatttga gcacttaact
    17041 ctttcaagct cttttctcca cttaatatat cattggctaa atcttcaagc tttttattta
    17101 cctgctcttg aatgcgttta ttttcttcta aattcttagt tttttcacta atggcattag
    17161 catgcatttc attggacaat aaaaaaaaac aaagaaaaat tagaattttt ctcatttttt
    17221 caccctaaac atcaccgaat ttacacagaa taaacatata aacaaagtca ctaaaaaaat
    17281 cacgcccaaa tgcacgataa aattaatagg aggcaagata atatcaaccg cttttaggct
    17341 atcttggact atagaaagat tataaatttg tgtaaaaaat acaaataaaa taataaaagc
    17401 aataaaacaa tccaaaacca caatcttata tagcataaaa gatctaaacc aaaaaggcgc
    17461 accaaacaaa cacataatct ctacgcgttc agtgtgttca aaaagccaaa ttctcatttg
    17521 ttttaaaaac aaaacaaaag aaagcaagat aatgataaat aaaaacaacc aaaatacaaa
    17581 tttcatcaaa acaagcaaag aataaacctt atcatgcgtt ttagcaaaag tctcgacctt
    17641 gctaatactc ggtatgctta aaagctggtt tttaatggta ttaagctcat tttgtgtagg
    17701 caaataatca agcttgatac tataaaattt aggcaaagaa tctcgtaaaa cttttaaatt
    17761 tttatcagaa atatcgtttt ttaaacgatc tatcaaatct ttaggatcta atggctccaa
    17821 attagaaaag gaagaaagtt tggttttgat aacattctta tcaagctcag cagagcttgc
    17881 aacgatgata ttataatcct tattgacaag ctcttcataa tgtcttaaag tagcatttgt
    17941 aagtaaaata aactcaaaag caaacatcat aaaaagcaaa ggcaaaatca aagataagtg
    18001 ggttttaaaa aatttcattc atatttccat tttctatatt aaaacgacga taattcagtc
    18061 ttaaattact cggaattcta tgtgtaacca ctacaacaca agtacctaaa agctctctag
    18121 ctgattttaa aagtgtccaa atgatatctg aagaatactc atctaaattt cctgtaggtt
    18181 catcgcaaag caaaagctta gggttatgtg ctaaagctct agccatagct actctttgtt
    18241 gctctcctcc gcttagttga ttgggcaatt tatccgcttt aaatgtcaaa tttacatgct
    18301 ttaaaagctt acttgcttga tcatgacaaa cttttttact ataaccttta atcataagag
    18361 gaagcatcac atttttttct acgctgtatt cttgtataag tctataatct tgaaaaataa
    18421 taccaatttg ctgacgcaat tttaaaagct ctgaatttcc aatctttcgc atggaagatc
    18481 cacatacttc aagctgccct gaaaggagtt ctaagtcccc gtaaaaagat tttaaaagag
    18541 tgctttttcc acttccactt ttacctgtaa taaaaacaaa atcatcatct ttaaaagtga
    18601 aactggcttc tttaataacc aattcatcat aacctaaaga aagtttatgc gcttgaatta
    18661 aatttgacat cccatcctct ttgaatttca aaattcgtaa attatgcttt atttttgctt
    18721 aattttcaag aaaatgtttc atattaaagt gaaatttaac acttttctta agctttttta
    18781 tagcttttaa attttcttgt atcttaaaag gctctttaaa aacaaaacta atcgcctctc
    18841 ctatatgtaa atagcaatgc tcaggcttat taaaagcacc aaaagctatt tttaataata
    18901 aactttcccc ttgcttataa atattttcaa aatgcaaaaa gaaatcctct ttttttaaag
    18961 taaaattttc aaaatttttc tctaaaagca tcagatcatt tttacttaaa tgtatatctg
    19021 aaaaatcaaa ttcttctgat aaaacattct tttcttcttt atctaaattc cacacccaaa
    19081 gatcataaat atctttttct tgtcttttcc atctatcttc gtatttgcta gaaatttcta
    19141 aattttcatt ttttctaatg ctaaattgcg gtgatgagaa ttctaaaaat tccttaaaag
    19201 taaagtcaaa atactcataa ctatccgttc taagctcaaa aaccccttgg gttgtaagca
    19261 ctcttgcaca ttctttgcaa aatgctttag aaacaacacg gcgatgaggc tttttatccc
    19321 aaggaactgg gaaatgtagg aaaatttttt ctatagaatc agaccgaaga atactcaaca
    19381 aaagtctagc atcactttga actaataaga tattatcaat accttgagcg cgtgcaagct
    19441 tggctacctg cgtgatggct ggattataaa tttctatccc aaggattaaa atttgagggt
    19501 tgtttttagc ttggtaaagc aaatgtcttc ctgaaccaaa accaatttcg atgtaaattt
    19561 ttccctcaag cctttctaaa acttcttcaa aatcattagc aatcaaagga gttttttcgg
    19621 ctaaagcatt attttttata ccaaaagcct cgctgataac atcctcgcaa aaatattgct
    19681 taaaaatata taaagcctta tgtaaatagg ctattttaga aggtttggta tgcttatcta
    19741 ccttaactac aaattcattt tctccttttt taatctgtag aaaaaagctt tcttcctcga
    19801 cccttgtgta gattaaattc acattatcat tatgtgccat ccacacaaat tctaccccat
    19861 ctttttcaaa gggtagaatg atttctttaa gttttctagt tttaaaattt ggcactattg
    19921 cttcgcctta actttctttg aaggctctga acgaagacca acagaatcaa tcgctatcac
    19981 ttcatagcta tattctacac ccggtaaagc tttaatatct tttaatcttt tttcttttat
    20041 acccttaaaa atagcatttt gatcaccgcc atagcgtcta acttcgtatt caaccgctct
    20101 tgagtcatta tccacccatt ctaaatcaat accatcactc gtactttgag ccaaaataat
    20161 actaggagaa gatggaattc ctaaagtttt accctctacc ccatctttag gcataggact
    20221 ttcaagctcg tctatatcta ccatggttac tttatagtat ttactctttg cagcaccttc
    20281 aactatatct tcataagaat tttgctcggt tttagccaaa agagtgtaag gaagaaaact
    20341 tgaacttgta gaataaactt tataatacga aaaatctttg tatttaggag cgtcccatgt
    20401 caaaactact ttattggctc catctaagct cgcatttaaa tgctcaactt gaggaggtaa
    20461 ggccttgctt gtagaattta aaatagaact tggctggctt tgcaccccat caaatccaac
    20521 agcaataatt ctataattaa aactctcctc cggttttaaa tcctcatcta taaattcagc
    20581 attcaagcga tttttcacct cggcaatttt tttaaattct tgtccatctg ccttagctct
    20641 ttctatgata taagaagcaa ctcttggatc tggatgtgga cgccaaatca atttaattcg
    20701 gcttggtaga ttggtgatag cttgtgcaaa aggaatagcc tctaatcttg gcatagtttt
    20761 tacttcaatc acctttccat cttctgaaat atgaccttga tcattaaaac ttctcatcat
    20821 atagtaatat tttgtatttg gctcaagctt agcatctaca taatgggttt gaaatttatt
    20881 tttaatcgtt cctacaagtt taaattcagg atttgcatca tttgagcgat ataaataaaa
    20941 tcctttgata ttatcatcat ataaaggatc ccattcaaac gctatattgc taatatcact
    21001 aagactttta agattattaa tctttggcaa gctttcattg actaaaagtt ctttatttga
    21061 acctatatta gaaagttgcg aaacactgca agcactaaat aaaagagtca aagcacccaa
    21121 gcaaagactc aagtgaaatt ttttcattaa gctctcctaa aataaatttt ttttctaaaa
    21181 tttgtttaaa atcgtccatt aatggagctt ggataaatat tttttctcca tttctaggat
    21241 gaatgaaata caaaaaatac gcatgcagca taatcctaca ctcgtatttc cccctatagc
    21301 catataattc atctcctaaa atatgacgat ttatgctagc taaatgtgct ctaatttgat
    21361 gcgttctacc cgtaaaaagc ttagccccaa taagactcac ttcctcgctt tttgccaagt
    21421 taacaaaagc acttttagcc tccttagaac ccttaacaaa gctatttgta actatttttt
    21481 taatggcatt agcactggat cgaatcaaag ctttatctat gataatttta tcctctttta
    21541 gtggcaaatc aattaacgca agataaattc ttcccatagt tttatcacta agctgctcac
    21601 taagcttttg atgagtaaaa ttattttttg ctatcaatat agctccgctt gtttccttat
    21661 caagcctatg aacaagccct gcgcgcactt ctccgcctaa ggtagaaagg gtgtattgtt
    21721 tttctataag ccaatccacc aaagtcgcac tcttaacact ttttgctcca tgaacaacca
    21781 aatttgaagg tttatttaaa accaacaaat cctcatcttc gtataaaatt tctatatcaa
    21841 aatctatatc aaatttaggc ttagcttcct ctacaagtgg caaatttaaa acaagtttat
    21901 ctccgacttt taacttgaat gaatttttat tttgaatttt atcattaacc caaacgcagt
    21961 ttttttctat catcgaggct atttgattgc gactttgctg aagattttta gctaaaaaaa
    22021 tatcgagcct tgaaggttca tcaaccaaaa aagtttgcat tttttcctta taaaatttta
    22081 tataatttag agttttattt tataattata ttttaatact acaaattgaa ggcaaatttt
    22141 gtttatacct gatagaagaa ttttaacaca ttttgattat atgcaaccta ttttgtttgt
    22201 acctattatt ttaatttcgt tttttttaat ctttgaagcc aatgcttttt tagccgaaaa
    22261 acaatttgtc tatgcctgtg taggaattgc cgcatttagc gtattctttt tattgcctat
    22321 tcgcaaactg atgtggctta tacccatagc ttattgggtc aatatctttt tgcttttaag
    22381 tacagatatt tttggtgttg aaaagttggg tgctaaaaga tggcttgaaa ttccttttac
    22441 tcattttacc atccagccct ctgaaatttt taaacctagt tttattttaa tgcttgctta
    22501 tctcatctat caagatccac cgcctaaaaa tggctataaa ctaaaacaat ttctaaagct
    22561 tagttttttt atcattttgc cttttttatt gatcgctcaa gagcctgatt taggaagtgc
    22621 catggtgctt ttaatcgtag gttttggcgt gctttttatc atgggtgtgc attataaaat
    22681 ttggcttagt atcatcatcg ccatcggtat aagctctccc atcatttata cgcatttgtt
    22741 aaagccctac caaaaacaaa gaattcatga ttttatctcc gaaaaaccaa gctatcaagt
    22801 cgcacaatcc atgatagcca taggcaatgg cggccttata ggaaaatctc aagatgaagc
    22861 tacacaaacg cattttaact ttttgcctat ctctacaagt gattttatct ttgcatatct
    22921 tatagaaaga tttggctttt tggggggatt tgtattgatt ttactttata ctctactcat
    22981 ctttcattta ctaagcttaa atcaaaagct taaggatgat tattttgcta gagttgctat
    23041 aaactgcgta gcattgttta tttttattta tgctgcggta aatatttcga tgactatagg
    23101 gtttgcgcct gttgttggta tccctttgcc tttttttagc tatggtggaa gttcttttac
    23161 gatttttatg attttctttg gaattttaca gcatttgatt acctttagat acttttgggt
    23221 agacaataaa aataaataaa ataattttaa gcaaaaataa gatataattt tatctttaaa
    23281 aattaaggcg gatttatagc tcagttggtt agagcaaccg gctcataacc ggttggtcgc
    23341 aggttcgagt cctgctaaat ccaccattac ttcttttctg aaattatccc aagcaatctt
    23401 aagtaatcta aaattatcaa ttaagatatg ataaaataat acttgaaata atcttaaatt
    23461 gtcttaaata atcttaaatt gtcttaaata atcaggattg acaattttaa aagtatatgt
    23521 tatagtgtat gttaaatttt aaaattcaaa aataacatat actttttaac ataggaatat
    23581 taaacaatga ttattgttaa tgataagcaa cttaaaactt taattgtaaa aaaaagaaca
    23641 tacattaaag atgcgtgcac caaaaatctc tacatcgaag caaaagattc gctaaaaggt
    23701 actattatct ttttttattt tagatatagg ctaaacaaaa aaatacaaag cattaaaata
    23761 ggaaaatacc caacaaccac actgtcaagt gcaagagaaa aagcaaatat ttttaatgat
    23821 atgttagcgc aaaaaattga ccccaaagaa caaattcaag ataaaggtgt aaaaaaatca
    23881 aaaaccgtaa aagaaatttt tcaagaatgg agtcaagttt tttataaaaa taatacttct
    23941 tataatttat cgaagagatt agaaactcat attatttcta aatacgaaga caaacatatt
    24001 gatgaacttg ccaaaaatga tatacttctt gttcttgata aactttatgt agaaggtaaa
    24061 ctcgaaacta taaaaagagt cttcttgggt ttaaaaaaaa tgttaatgta tgccataaat
    24121 aaagaatata tagaaaatag caatatttta actttggaca tgaaagctct ttacggctcg
    24181 cctaaaaaac aaaatcttag agctatcaca aaagaagaaa gatttaaaga gttgctatta
    24241 gcaatagaaa attataatgg aagtatattc acaaaagtag ccttgcaaat cagcccatat
    24301 ctatttttaa gaagtactaa tatcagaaat ttagaatgga gtgaaataga tttcaaaaat
    24361 ttaaaaataa ttatacctgc aaataaaatg aaagggggtg aagattttat tataccacta
    24421 agtgaaagcg tgatcaagtt gtttgaattt atcaaacctt tttcattcca caattcaaaa
    24481 tatgtttttc caagtgatat aagcaaatcc aaaactatga gtgaaaacac attaaatcaa
    24541 gccatcaaaa gattaggctt tggcgatgaa atggtttttc atggttttag aacaacagct
    24601 tcaaccttgc tttatgagtt taaaaatttg catggacaag atagcgaagt tatagagtta
    24661 tgcttagatc atcgagaaag aaataatgtt aaagctactt ataatagaag tttaagacta
    24721 aatgatagaa aactcttaat gcaatattgg agtgattata tcgacaaatt aaaaggaata
    24781 atatgaaaaa caaata
//
LOCUS       DAQUWA010000018        24346 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.018, whole genome shotgun sequence.
ACCESSION   DAQUWA010000018 DAQUWA010000000
VERSION     DAQUWA010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24346
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.018"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            949..1863
                     /locus_tag="R8X70_000636"
     CDS             949..1863
                     /locus_tag="R8X70_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928439.1"
                     /translation="MNNEIEIKDLNEINKNNKQQVVYRKDNLSTDCITGEVIERNQII
                     VRKVQTRESFIKLFTENIHYIINLEPQEKTLFFTLLSSVDYKNVVRFDKSMKQNIILD
                     KVLSRAGMYRALNGLIEKKVIFKIDRDFVKSYAGVGSDDCYLFNPNLVGRGSWNDLKN
                     LRHTITREWDFENLEVRENLEIEEEYLGLDEIKNNQKQYQVKEINQEHDETTKVKNTE
                     IVIEEKNNSANNQYSFDKKEEPSINKKVLISNDTQPALFDENQKEQEARLFIEKFGGM
                     FSGAYHPTKSAKELKREKLDQDLKEGKI"
     gene            1860..2273
                     /locus_tag="R8X70_000637"
     CDS             1860..2273
                     /locus_tag="R8X70_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEF2928440.1"
                     /translation="MKKVFLDTNIFIDFFEETRENNQQAKQLIYFLISNDIKIIFSED
                     MISTVAYILKKENLGKFTHFIKTISLEKEFEIVSFGASVINMACDYYDKYQGDFEDYL
                     QYFCAEKEGCCAIYTMDKNFPNLKIPVKRYGEIDI"
     gene            2680..3618
                     /gene="trbB"
                     /locus_tag="R8X70_000638"
     CDS             2680..3618
                     /gene="trbB"
                     /locus_tag="R8X70_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer ATPase TrbB"
                     /protein_id="HEF2928441.1"
                     /translation="MSNLEFQARINEKIKREFGDILFYLEDRETIELMLNSDGKLWLE
                     KLGQDMICLGEFSEAKAKSIITAVSTLLDTTTNAENPILECELPLDGSRFEALLPPIV
                     AKPTFTIRKKAVKIFTLGDYVGSNIITPNQKEVLINAIIERQNILVVGGTGSGKTTFS
                     NAIIDGISKITPDHRIVIIEDTAELQCASENKVILRATDKVDMLRLLKATMRLRPDRI
                     IVGETRGKEALDLLKAWNTGHPGGIATIHANSANGGLTRMEQLISEATNAKMSKLIAE
                     AVNLIVFISKSKEGRKVKEIIKVIGYENDKYITQAI"
     gene            3628..3924
                     /locus_tag="R8X70_000639"
     CDS             3628..3924
                     /locus_tag="R8X70_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbC/VirB2 family protein"
                     /protein_id="HEF2928442.1"
                     /translation="MKKFLILFLALGLGYALASTTGAGLPWEGPLEQIKASLSGPVAF
                     IMSILAIIGAGAGLIWGNEFSGFIKTLFYIVIVIALIVGANSFMSLFSTSGALI"
     gene            3924..4211
                     /locus_tag="R8X70_000640"
     CDS             3924..4211
                     /locus_tag="R8X70_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirB3 family type IV secretion system protein"
                     /protein_id="HEF2928443.1"
                     /translation="MEELQRIDIYSALNKPNLIFGADRELILMVGVISFALIFTGATL
                     LTSIIGIFLFFFCNMLLRLMAKSDPLMRQIFLRQIKYKKFYYAQSTPFSKD"
     gene            4215..6680
                     /locus_tag="R8X70_000641"
     CDS             4215..6680
                     /locus_tag="R8X70_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbE"
                     /protein_id="HEF2928444.1"
                     /translation="MLALKEFRSKAKAFPDILNYASFIDEGILLNKDGSLTAGFYYRA
                     GDISSMTINERNTLSARINSVLKTLGNGWAVHIDCSRIKTENYIDGDTFYKSNIAQIL
                     ENERKHYFDNVEHFENLFTMIFTYLPPHKSINKITDLMIIDETKNKNQGDKILEYFKN
                     TLQKLEDSLSNYIKIERMLPRIAIDEYNNEYILDDMLEYINFCICGERQKIILPNAPM
                     FLDCLLGGRHFETGMHPRIDSQYIGIIAIEGFPSESYPNILNALTELNFDYRFNTRFI
                     FLDDFEAQNSLNKYRKKWQQKTKGWLDQLLDRPARKQDDHAVLMVQELDSALSESKSG
                     MIGYGYYTANIVVFDRDYESLEYKLKDIRKVLENLGFLSRTETINSVEAYLGTLPGFV
                     YPNLRRPILNTLNLTHLIPLASIWAGDKYNSSERFPPNSPPLMQVVTSGNTPFRLNLH
                     VSDLGHTLIFGPPGSGKSTLLANIFLAWQKYPNAKIYAFDKGQSLLAPTLATGGIHYD
                     VAGDHSSLAFAPLANIKTDAEIAWAEFWIETCLKLQNVNITPKQKKLIHEALISHINT
                     NSTSLTEFVSALQDSDLRDALNYYTISGTGGFLFDSEEDKLSLSSITTFEIEELMNLG
                     DQYIIPALLYIFNRIEKGLDGSPTLLIIDEAWIALKHPAFKDKIVNWLKVLRKANVAV
                     IMATQSLSDSAKSGILDILQEYCPTKIFLPNPEAYKKGSENVLAPYDFYKIFGLNDVQ
                     ISIINNAIQKREYYYTSPLGTRLFNLALGKTNLAFTGISDKVSVKRVNQLYQQYKENW
                     AYKWLEEKEINYKRFDNSKKEEA"
     gene            6677..7261
                     /locus_tag="R8X70_000642"
     CDS             6677..7261
                     /locus_tag="R8X70_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HEF2928445.1"
                     /translation="MSNLTVININNQEVVFENKDEQVFCTSLDVAKVFGKRHDDVLKA
                     IRNILNDLREIGDLQCIRNFTESFQYRKIEGFRGRGKKYPYYQLTKDGFSLLAMGLTG
                     KKALRFKIAFINAFNEMERIIKNQYTPKLENYNKYKIPNTPYRENIIKAIMQTEQNRN
                     CEFEELIAYEIKEIYKDNKSHIEQKINFRAKGLI"
     gene            7492..8124
                     /locus_tag="R8X70_000643"
     CDS             7492..8124
                     /locus_tag="R8X70_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbM"
                     /protein_id="HEF2928446.1"
                     /translation="MASLLLFIGSNAFADDVLTGDTKLACEAILCLSSGTRPAECGPS
                     LARYFAIHFKKPWKTIDARRAFLNLCPIQNDANIEDLVLNNLVDDVLPVSDPRQCTPN
                     YLNTQVETKRSYSTFGIMSYRINPNMPNFCHALINHAYTDYKTPKYKCTGEFYNSLEW
                     KLSAKLQLITQQAYESLSDDQRYMISRTCGDRNCYDYYQKIPFTKECWTY"
     gene            8136..8696
                     /locus_tag="R8X70_000644"
     CDS             8136..8696
                     /locus_tag="R8X70_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HEF2928447.1"
                     /translation="MSNTSIININNQEVIFENKDEQVFCTSLDVAKVFGKQHKDILEI
                     IRSKIRNKEIQNFNGRNFSPVKYKDAKGEMRPAYQLTKDGFSFIAMGLTGRKADKFKI
                     AFIDAFNEMERIIKNQYTPKLENYNKYKIPNTPYRENIIKAIMQTEQNRNCEFEELIA
                     YEIKEIYKDNKSHIEQKINFRAKGLI"
     gene            9284..10072
                     /gene="trbJ"
                     /locus_tag="R8X70_000645"
     CDS             9284..10072
                     /gene="trbJ"
                     /locus_tag="R8X70_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbJ"
                     /protein_id="HEF2928448.1"
                     /translation="MKKSLFGVKKATSTIIATLIIGTNNAFAGGIPVIDVSAIANQVK
                     DYAMQLQQYEQMYSQLQQQIQMVQMQKQNLERLTKEDWDNLGTVLYQTRNVMNKVNGI
                     SYDIGNVSRKFEDTYKNFEGYSNDLENATNESERNKIYSDRYKQIAETNQNTFNGTLQ
                     QLELRYQDLESEDVLIAKLKQNSQNSNGNLQAVQATNDLLAYQIDEIRKLRSVIMDQS
                     NMLTNYLASQNNKQILEQAKMEKLFQRNKNNNFYQSNSDAFKWK"
     gene            10121..10384
                     /locus_tag="R8X70_000646"
     CDS             10121..10384
                     /locus_tag="R8X70_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HEF2928449.1"
                     /translation="MKHFIFSGLIGLGALAFLAGCGDEAKTSDYYKAHLDEAKARVAE
                     CKKMEKMNETQQRDCSNANEAVLFQRDKNNKFYQSSPEAFEWK"
     gene            10371..11558
                     /gene="trbL"
                     /locus_tag="R8X70_000647"
     CDS             10371..11558
                     /gene="trbL"
                     /locus_tag="R8X70_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HEF2928450.1"
                     /translation="MNGSKLALVLFLCFLIPNLAFGAESPEGALTLIKNGLLSWTPLI
                     KTACLWVFWTLVAIDLIWTFGLKALSGFEFGEFLTTLIKKIIYIGIFLFLFNTDQWLQ
                     IIFNSFSQLATNVNNGIDVKPNNIISTAIDVVITILQSASIFSPVQSFFIAISGIIIL
                     ISFLLMAIDLLIVYLKFFLMNVIVFFALALGGLNHFKQIGLNPIMTAIKVGVELFMIQ
                     GLMGICFTMIGAIANEINQNITIENILIALVTPVIFCIITKMIPGIIEAVFNGSIGES
                     AGAAAGFRAVATMAAGAAAGAAAGAVGITRAMNAAKALHLAEGGAGGMDLVKGVAKNL
                     ASAGGEHLRDNLTRGRMPNQMANRLQEKLKDIQGKTGEGGISAGTPKEESYQSGVNPD
                     VAK"
     gene            11889..12584
                     /locus_tag="R8X70_000648"
     CDS             11889..12584
                     /locus_tag="R8X70_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbF"
                     /protein_id="HEF2928451.1"
                     /translation="MNIFRQKQKIEKNEFDTSSNPYLNAKTEWLERYGDYITRAKNWQ
                     MVAIISLAMCFVCVLFIGYIGSQNKLIPYVIEVDKLGNTAKVGMVQNIDLKNPNVIKY
                     SLNTFIYSWRSVWGNAETQRKFIFDAYAYVEPRSKAFNYLNSEFQKNNPFTRSTKENV
                     RVKIKNIVPQNIDTWQVEWEETTTNLNEDILSKETYRGLIRIKQIIPNTEEQILKNPL
                     GIFITDINFAKIL"
     gene            12595..13749
                     /gene="trbG"
                     /locus_tag="R8X70_000649"
     CDS             12595..13749
                     /gene="trbG"
                     /locus_tag="R8X70_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbG"
                     /protein_id="HEF2928452.1"
                     /translation="MKKFIFNTNTATREIHHTPTSGARLKSLDYNYTKEYNYNYDEFY
                     GIHLSSFRGLDFRHKGDDLVANTPKNYTQKLKKLSLIASLLLFIGSSAYANNLNERDF
                     SNLTPKEKKDLAIAQKWINSKTTTIQGNNGEVIFLFGESMPSIVTAPLRLTDIALEPG
                     EVIKDVQIGDSIRWAVSLSVSGEEPYLISHIIIKPTDKNLQTTMNIMTNKRVYRLNLI
                     SEAKKFMPAVSFNYPNSIIKTLEDYKNQMKAKSESKNFYKTKDDEIPSNIENLDFGYS
                     VEGNAPFKPLRIYNDGIKTYIQMPKNLKFYEAPALMILDSSNEKQIVNYRLKYDTFIV
                     DRLFNKAILLSNVGSKQEKIKITKHSNKANQDIVNNVLYDLSLQNKKENK"
     gene            13746..14189
                     /locus_tag="R8X70_000650"
     CDS             13746..14189
                     /locus_tag="R8X70_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928453.1"
                     /translation="MKILFLALIAFFITSCAKMNSDYFNSSFAVEETKINYNKIADDF
                     SQFIISYYAPNKTTFFINEDKNNQDFSNYFINTLRKKGYAISNDNSKKDLTFLSYQIS
                     QIDNENIVAIFNINESKINVIYKIIENKLVKPNITSFNFTPKTKG"
     gene            14193..15434
                     /locus_tag="R8X70_000651"
     CDS             14193..15434
                     /locus_tag="R8X70_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002797794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbI"
                     /protein_id="HEF2928454.1"
                     /translation="MLEVNMSPNKFLPKNNKRLSKVPIIIIFAIIAIVLFSIFYVALS
                     RKQNLERQTAQTTPKEETQIATNHNNDLNLYIDELQVQKAQENNVISPPMPNATQQPI
                     QETNSQTTQQPPNNTPILVQNNAIDEKEMKIKKDMQLKALLSNTKLDIKTEATDSKKN
                     QAINFNPPNNNEDINLGAINPQNTGLGLESGTNKDVQGQQFLSQKKDNGYLKYVKQKP
                     LSTYEIKAGWNIPAILITGVNSDLPGQILAQVTQNVYDSATGKYLLIPQGTKVVGAYS
                     SNIIYGQSRLLVAWNKLIFPNGDTLNLDGMQGTSQDGYTGFEDQVDNHYFRIFGSAFL
                     LSSISAGIALSDNSDTNSEKETASDKAIAQAIQQMGQVASEMIRKNMNISPTLKIRPG
                     YKFNIFVTKDIILEPLELNND"
     gene            15427..15972
                     /locus_tag="R8X70_000652"
     CDS             15427..15972
                     /locus_tag="R8X70_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEF2928455.1"
                     /translation="MIDIALIEQCKNPNLETQIIQKIIQVESNNQQFAININKVGSFI
                     LKNKKEAENLANNFIKGGYSVDIGLMQFNSNNLKSSTFSHYSVEDLLDTCKNIKAGSD
                     IFYLAYEMTNKNLAKEDRINQALSIYNTGDLKKGFSNGYVAKYDSTAKTIDDLEEKAR
                     KSDTRIKITYNLFNLQTQKKE"
     gene            16069..16431
                     /gene="ssb"
                     /locus_tag="R8X70_000653"
     CDS             16069..16431
                     /gene="ssb"
                     /locus_tag="R8X70_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEF2928456.1"
                     /translation="MINNITIGGRLTADAELRHCNQGSIICTFTLANNRKYKEIENST
                     YIEVSLFGSFANAMHPYLKKGISVDVVGELTQDTWEHEGKIYSKHRIKAKEIDFRTPK
                     KEKQTIPNIEEGENYEGF"
     gene            16418..16558
                     /locus_tag="R8X70_000654"
     CDS             16418..16558
                     /locus_tag="R8X70_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928457.1"
                     /translation="MKDFKELETIPNFSYEVDPLTAEELGAFKENALSEDDAKEGTED
                     QG"
     gene            16563..18776
                     /locus_tag="R8X70_000655"
     CDS             16563..18776
                     /locus_tag="R8X70_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HEF2928458.1"
                     /translation="MKNKDFIQETADKIIESLKNGTAPWIKPWKGIDLANNMPYNPIT
                     NKPYNGINSINLMLQNYNDPRWLTYKQAQSINAQVRKGEKSTLIQYWQFSEMVDKLDE
                     EGNVITNENGEVEQIEVKLENPKVFFAYVFNAEQIENMPKLEQKQEIDNFQIIKEAQK
                     ILDDSKAIIHHKGNRAFYNAANDTITLPPKENFLSEGAYYTTALHELGHWSGHESRLN
                     RDLKNPFGSKEYAKEELRAEIASFLFNGKIGLDYDPGQHLSYIDSWVQILEDKPNEIF
                     KATSDATKIVNFIESLSLEQKQKIELENSNPQNQALKQDKELNLATRKTYLYVPFEEK
                     EFAKKAGAKWDKEAKMWYAPKGADLKNFTQWLNQSPLTQSYNNTHDEFKAFLEKYELN
                     IEGQPIMDGKLHRVSVIGDKGREKSGAYVGFLNGHPAGFVQNYKTGIKENWKSANSLE
                     NTKNKEINLQNALEHNKALKEQRDKELNQAYENTAVKLENEYNNARWANSEHPYLKEK
                     GFDKNFYLKQDKNGNLLIPLRDIEGKYWATQRIFANGDKMIGATRTAEEKEQGIEYPA
                     KKQGNFFLLGAKNLNNVNEVYICEGFATSASVYEATKSPTIMGVDAGNLEIIVTNIKE
                     KYPKMNIIIAGDNDVKKELNGNKNVGKETALGIQKKYPEVKVVLPNFTNQEAQKGLSD
                     FNDLMKSRGLEEIKKQLKEQIAKQLMVEKATTKALDKNKGINKEITAKKDIGISL"
     gene            18773..20596
                     /locus_tag="R8X70_000656"
     CDS             18773..20596
                     /locus_tag="R8X70_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HEF2928459.1"
                     /translation="MKKQTNQTLVYILAITGILLAFIIISQIATQYLAKSFNYSPSLG
                     ETLLYGFYNPFKWISWSYTYYSFYPDFFKKFFMVMFAGIAFCFIVFILVKLAFLRKAK
                     AIENLHGSAHWATLEEVKESGVFDKDKGVYIGGFEHKKTLHYLRHDGPEHVMLFAPTR
                     SGKGVSLLLPTLLSWEESALIFDIKGELWALTAGWRQKYAKNKVLKLDPTCLDDSAVK
                     FNILEEIRLETMHEIKDTQNIAINLIFKGETPPTNPTQGSTAYFKSEAANFLVSIILY
                     ALYLKKIQGKNPPNLTDIYKFINDPNQSIDELLEEMVECDISTMDKNTQEIIQSISRS
                     MKNKATQELSGVIGTASETLNLYIDPILAKNTAKSDFKIKDLMNHDNPVSLYLIIPPG
                     QKDRLRPFFNLLINQIFRTLTDDSLNFKNGENVKRYKHKMLVLADELTMFGKLGVLEE
                     NLAYMAGYGMKFYGSIQDIQQLYSIYGEKETIISNCHIRIAFAPNKIETAKLLSEMGG
                     ITTIVKKSITSSGKRTAVMLGNVSETIQEVQRPLITADECMRLPSAKKDKDDKIIAPG
                     DMLIFVAGQAPIYGKQILYFKDPAFLARSKVILDKQVSDIL"
     gene            20607..21326
                     /locus_tag="R8X70_000657"
     CDS             20607..21326
                     /locus_tag="R8X70_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraL"
                     /protein_id="HEF2928460.1"
                     /translation="MAKIHFVLNGKGGIGKSFISSLLCQYFLDKGESIVAIDTDPNNT
                     TLLNVKALKAKFLQLIDDDGKFDVRAFDKIVELAFEKKAKNYIIDSGATTFIPLIDYL
                     KENEVLDFLTSNSLEVYMHVPIVGGQARDDTILGLTQLTQAFNCSFVVWVNEYHGSII
                     KDNSEFEETKEYQAIKEKIKAIIYLNALSKDTFGKDLLELTSKNLTFGEAMQDKSFSL
                     MSKQRLKIFKDKAFSQIGNIL"
     gene            21420..21674
                     /locus_tag="R8X70_000658"
     CDS             21420..21674
                     /locus_tag="R8X70_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928461.1"
                     /translation="MQKQYPEVHSLEESLAILKKYKDDVNKEDYEGIKSVISNHAIES
                     IYMNELDIIAMIKQSALKLSADEIIAEYKKKGFVEYERKQ"
     gene            21658..22311
                     /locus_tag="R8X70_000659"
     CDS             21658..22311
                     /locus_tag="R8X70_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEF2928462.1"
                     /translation="MKENNEELFKRLITDNKLGIKDEKLFDKESRFYTGLRERELTLN
                     PIKGNFDYQHLKNIHKHIFQDVFQWAGKDRMEVGLHGNFGKYAPNGTITNFVPGKDLN
                     ATAQQIFTWLKEDNYLKNSKDLNDFAKNLAEFARNLNALHPFREGNGRTQRIFLNELA
                     KNAGYKLDLNLIPKDKTIMASVEASQLKLGKLEAIIKTNLKSFRQNLDLEQNKGMSL"
     gene            22316..22783
                     /gene="lepB"
                     /locus_tag="R8X70_000660"
     CDS             22316..22783
                     /gene="lepB"
                     /locus_tag="R8X70_000660"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEF2928463.1"
                     /translation="MRKAIAIFAFSFAFLLILSYLIFYFGGFHFNYTRSMPLGLYKEI
                     NSSTLNKNDIVLLKIPQKKEILLKKIIAVNGDFVEVNTQGVFINENLLPNSKIFSFDS
                     EGNLLEFKPFKRKLKENELFVIGENIKSYDSRYFGVVNILQNEVKKVKLMISF"
     gene            22848..23243
                     /locus_tag="R8X70_000661"
     CDS             22848..23243
                     /locus_tag="R8X70_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraM"
                     /protein_id="HEF2928464.1"
                     /translation="MNKKELIEEIAKKHHIILDENDPILAVVSANEIIFDDFLKKIDL
                     LFIKHKTDLESYKFNILNEIREYSKNNQETLKDILIQAQTNQNTIKASQEKTEDTKEK
                     KNTNINFWIIAIASQIIFLLVGLIIGIII"
     gene            23335..24021
                     /locus_tag="R8X70_000662"
     CDS             23335..24021
                     /locus_tag="R8X70_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEF2928465.1"
                     /translation="MIISIVNEKGGSGKTTLAVNLSARLAEDGDNVLLIDADPQKSTE
                     VFSDMRSQSNLEPLFSNVSKTGISLGDEIKRMKNAFDSIIVDTGGRDSKEMRKAILSS
                     NIIIIPTIPSQYDVNVLDHMLEIYNEVIEINPNLLALVLVNRVSPNPFLAKELENLKE
                     YINEAKKEKGLDRVIMLESVIYERQAYRKAVIEGKSMKEFCDKNDKALNDFENFYQEL
                     LKIANEKLGV"
     gene            24024..24248
                     /locus_tag="R8X70_000663"
     CDS             24024..24248
                     /locus_tag="R8X70_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928466.1"
                     /translation="MGFKKLSSEAPKNENDFVNSARGETGNAKTGNAKRNKKLMINFT
                     EEEYQILNQEAHSMGLSLNSYVRFKIFRKE"
BASE COUNT         9676 a         3346 c         3958 g         7366 t
ORIGIN      
        1 ctgaaacttc tgcaattcta gcactaaaac aattcaaata gccagcctta caccaaaaat
       61 aaaaatattt aagaaaataa aaaacttaaa caattaaatt ctcattttac cattacttta
      121 agtttcaaag aaaaatactc taaacttaaa aagaaatatt tttatttata aaaagcctat
      181 attatcgata atcaaagcaa ttaaacctta gcttgaaaac tctacttttc aaatcataac
      241 ttctttttgg tgtatatagc aaattgcacc tgttaaggtg ctataatttg cataaatata
      301 gggtgcgggg tgtgcagtcg cctagagcga caaacgaact tgaccccgcc ctattgttgt
      361 aagaagagta agagacgctt agtctcttca aaatttgcaa atgagcgtta gcgaaatttg
      421 ctgtaaaaaa tttttgtttt caagagtaga ttaagaagga aaagacttaa aaaaatgctt
      481 tcaaatatag gtataatagt gctttgataa ggtttttaat tttcccacca gtgggacaaa
      541 ttttcccacc agtgggaaaa aaactgctcg tggtgggaaa attattttta gaaaaaatta
      601 tgtttccaaa taaattggga aaaaattgct ttttttactt aaatatgttt cattttttgg
      661 gaaaattgga aattgttttt gaatttgtaa gaatagatat agaagagata gcttaattaa
      721 aaatgctttt aaatatttat tttatagtgc tttgaagcac ttttaatctg tctcatcagt
      781 gagacaaata gtctcatcag tgagacaagt tagctcacct gtgagacgga ttgaagttac
      841 tttgtctcaa attatgatac aatattttat attttataaa atatttattg ctttttgtct
      901 caaattatga tacaatattt tatactttat aaatcagagg aataagatat gaataatgaa
      961 atagaaatta aagatttaaa tgaaattaat aaaaataaca aacagcaagt agtttataga
     1021 aaagataatc tatctactga ttgtattact ggagaagtta tagaaagaaa tcaaattatt
     1081 gttagaaaag ttcaaacaag agaaagtttt atcaaacttt ttactgaaaa tattcattat
     1141 attattaatt tagaacctca agaaaaaact ttatttttta cattgctttc ttcagtagat
     1201 tataaaaatg ttgtaagatt tgataaatct atgaaacaaa atattatttt agataaagtt
     1261 ttaagtagag ctggaatgta tagagcttta aatggattaa tagaaaagaa agtaattttt
     1321 aaaatagatc gagattttgt taaatcgtat gctggtgttg gtagtgatga ttgttattta
     1381 tttaatccaa atttagtagg acgtggatct tggaatgatt taaaaaattt aagacatact
     1441 attactagag aatgggattt tgaaaattta gaagttagag aaaatttaga aatagaagaa
     1501 gaatatctag gtcttgatga aataaaaaac aatcaaaagc aatatcaagt aaaagaaata
     1561 aatcaagagc atgatgaaac gactaaagta aaaaatacag aaattgttat tgaagaaaaa
     1621 aataactctg caaataatca atatagcttc gataaaaaag aagagccgag cataaataaa
     1681 aaagtcttaa tctctaatga tacacaacct gctttatttg atgaaaatca aaaagaacaa
     1741 gaagctagat tatttataga aaaatttggt ggaatgttta gcggtgcata tcaccctaca
     1801 aaatccgcca aagagctaaa aagagaaaaa ctagatcaag atttaaaaga aggtaaaata
     1861 tgaaaaaggt ttttttagat acaaatatct ttattgattt ctttgaagaa acaagagaaa
     1921 ataatcaaca agctaagcaa ctaatttatt ttttaatatc aaatgatata aaaataattt
     1981 tttctgaaga tatgatttct actgtagcct acattcttaa aaaagaaaat ttaggtaaat
     2041 ttactcattt tataaaaacc atttcattag aaaaagaatt tgaaatcgtt tcttttggtg
     2101 caagtgtcat taatatggct tgtgattatt atgataaata tcaaggagac tttgaagact
     2161 atttgcaata tttttgtgct gaaaaagaag gttgctgtgc aatttatact atggataaaa
     2221 attttccaaa tttaaaaata cctgtaaaaa gatatggtga gattgatatt taaaactcta
     2281 tttttgtctc aagaaaatga aaaaaataga aaatttttta taaaaaatgt atattttttt
     2341 accaaaaaat gagacaaaag caaaaaatct atattttgtc tcaagaaaat gaaaaaaata
     2401 aacattcaaa tgttaaaaat gtatcatttt attagaaaaa aaccttgaca attaaattta
     2461 aaataatata ataacgatat tagtttttaa tttttggaga attttttgag aaaaaataaa
     2521 cttaattttt gcttaacggc tagagagaga gagagagaga gagagagcag aataatctta
     2581 aacttttctt aatttttaaa cttttacaac tccacaatcc atacaaaaaa aatcctgaca
     2641 aatttttaac tcttgcaatt gaatcaaaag gactcttcaa tgagtaatct tgagtttcaa
     2701 gcaaggatta acgaaaaaat caaaagagaa tttggcgata ttttatttta tttggaagat
     2761 agagaaacaa tagaacttat gctaaattca gacggcaaac tttggcttga gaagctaggt
     2821 caagatatga tatgtctagg cgaattttca gaagctaaag caaaatctat catcacagca
     2881 gtttctacac ttcttgatac aaccacaaat gcagaaaatc ctattttaga atgtgaattg
     2941 ccacttgatg gttcaagatt tgaagcttta ttacctccca ttgttgcaaa accaaccttt
     3001 acaatcagaa aaaaagctgt caaaatcttt actcttggtg attatgtggg ttctaatatt
     3061 attacaccaa atcaaaaaga agttttgatt aatgccatta tcgaacgcca aaatatttta
     3121 gttgtgggcg gaactggtag tggtaaaacc actttttcaa atgctattat tgacggcatt
     3181 tctaaaatca ctcccgatca cagaatagta atcattgaag acacagcaga acttcaatgt
     3241 gcgagtgaaa acaaagtaat tttaagggct acggataaag tagatatgct taggcttttg
     3301 aaagccacaa tgcgacttcg ccccgataga attatagtgg gcgaaacaag aggcaaagaa
     3361 gctttagact tgctaaaagc ttggaataca ggacaccctg gaggaatagc tacaatccac
     3421 gctaattccg caaatggagg actcacaaga atggagcaat taatctctga agcaacaaat
     3481 gcaaagatga gcaaattaat tgctgaagct gtgaatttaa ttgtttttat ctcaaaaagc
     3541 aaggagggta gaaaagtaaa ggaaatcata aaagtaattg gttatgagaa cgacaaatac
     3601 attacacaag caatttaagg agtttaaatg aaaaaatttt taattttatt tttggcgttg
     3661 ggattaggat atgctttagc ctcaacaact ggagcgggtt tgccttggga aggtccatta
     3721 gaacaaatta aagcgagctt aagtggtcct gtagccttta ttatgtcaat tctagcaatc
     3781 attggagctg gagcgggttt aatttggggc aatgaattta gcggttttat taaaaccctc
     3841 ttttatatcg taattgtaat agcattaata gtaggcgcaa acagctttat gtcgcttttt
     3901 tcaacaagtg gagcattaat ctaatggaag aattgcaaag aatagatatt tatagcgccc
     3961 tcaacaaacc aaatttaata tttggcgcag atcgagagct tattcttatg gttggagtga
     4021 tttcatttgc actaatcttt acaggtgcaa cgctccttac aagcattata ggtatattct
     4081 tatttttttt ctgcaacatg cttttaagat taatggcaaa aagcgatccg cttatgagac
     4141 aaatattttt gcgccaaatt aaatataaaa aattttatta tgcgcaaagc acaccatttt
     4201 caaaggatta aaatatgcta gcacttaaag aattcagaag caaagcaaaa gcatttcccg
     4261 atattctaaa ctatgcaagt tttatcgatg aaggcatttt gctcaacaaa gacggaagtt
     4321 taacagctgg tttttattat cgtgcagggg atatcagttc catgacaata aatgaaagaa
     4381 acactttaag tgctaggatt aatagtgttt taaaaactct aggtaatggc tgggcggtgc
     4441 atattgattg ctccaggata aaaacagaaa actacattga tggcgatact ttttataaaa
     4501 gcaatattgc acaaattctt gaaaatgaaa gaaaacatta ttttgacaat gtagaacatt
     4561 ttgaaaatct ttttacaatg attttcactt accttccacc gcacaaaagc ataaataaaa
     4621 tcaccgattt gatgataatt gacgaaacaa aaaacaaaaa tcagggtgat aaaatattag
     4681 agtattttaa aaacaccctt caaaaattag aagatagttt aagcaattat ataaaaatcg
     4741 aaagaatgct accaagaata gctattgacg aatataataa tgagtatatt ttagatgata
     4801 tgcttgaata tattaatttt tgtatttgtg gtgagagaca aaaaataata ctaccaaatg
     4861 cccctatgtt tcttgattgt ttattgggtg gaaggcattt cgaaacagga atgcacccaa
     4921 gaattgatag tcaatatata ggaattattg ctattgaggg ctttccaagc gaaagttatc
     4981 caaatatctt aaatgcactc acagagctta atttcgatta cagattcaac actagattta
     5041 tatttttaga cgactttgaa gctcaaaatt cacttaataa atatcgtaaa aaatggcaac
     5101 aaaaaacaaa aggttggctt gatcagttac tagatcgccc tgcaagaaaa caagatgatc
     5161 atgctgtgtt aatggtgcaa gaactagatt ctgcattatc agaatcaaaa agcggtatga
     5221 taggatatgg ctattatacc gcaaatattg tcgtttttga tagagattat gagagcttag
     5281 aatataaatt aaaagatata agaaaagttt tagaaaattt aggctttcta tcaagaaccg
     5341 aaacaatcaa ttcagtagaa gcgtatttag gaactttacc tggattcgta tatccaaatt
     5401 tacgccgtcc aatattaaat acacttaact taacacattt aattcctttg gcgtctattt
     5461 gggcggggga taaatataat tcaagtgaaa gatttcctcc aaattctccc ccattaatgc
     5521 aagttgtaac ttctggcaat acgcctttca ggttaaattt acatgttagc gatttaggac
     5581 acactttaat tttcggtcct cctgggagtg gtaaatctac tcttttggca aatatttttc
     5641 ttgcttggca aaaatatcca aatgctaaaa tttacgcatt tgataaagga caaagcttgc
     5701 tagctccgac actggcaaca ggtggaattc attatgatgt agcaggagat cattcatctt
     5761 tggcttttgc tcctttggca aatatcaaaa cagatgccga aatcgcatgg gctgaatttt
     5821 ggattgaaac atgcttaaaa ttacaaaatg taaatattac accaaaacaa aaaaaattaa
     5881 tacatgaagc cttaatttct catatcaata caaattctac ctctttgact gaatttgtat
     5941 cagctttgca agatagtgat ttaagagatg ctttaaatta ttatacaatt tctggaacag
     6001 gtggtttttt atttgacagc gaggaagata aattaagctt aagcagtatc acaacatttg
     6061 aaatagaaga attgatgaat ttaggagatc aatacataat ccctgcctta ctctacattt
     6121 tcaatcgcat agaaaaaggc ttagatggaa gtcctacatt actcatcatt gatgaagctt
     6181 ggattgcact aaagcaccct gcgtttaaag ataaaatagt taattggctt aaagttttaa
     6241 gaaaagcaaa tgtagccgtt ataatggcta cacaaagctt aagcgatagt gcaaaaagtg
     6301 gaattttaga tattctacaa gaatattgcc ctactaaaat atttttacct aatcccgaag
     6361 cttataaaaa aggaagtgaa aatgttttag ctccttacga cttttataaa atttttggac
     6421 ttaacgatgt gcaaattagc attatcaata atgccattca aaaaagagaa tattattaca
     6481 cttctccact tggaactaga ctttttaatt tagcacttgg aaaaactaat ttagccttta
     6541 caggtattag cgataaagta agcgttaaaa gagtaaatca actttatcaa caatataaag
     6601 agaattgggc ttataaatgg ttagaagaaa aagaaataaa ctacaaaaga tttgataatt
     6661 caaaaaagga ggaagcatga gtaacctaac tgttataaat ataaataatc aagaagttgt
     6721 ttttgaaaac aaagatgaac aagttttttg cacaagttta gatgtggcta aggtttttgg
     6781 gaaaagacat gatgatgttt taaaagctat tagaaatatt ttaaacgact tacgagaaat
     6841 aggggatttg caatgtatcc gcaattttac ggaatcattt caataccgaa aaatagaggg
     6901 ttttagaggt agaggaaaaa aatacccata ctatcaactt acaaaagatg gcttttctct
     6961 tttggcaatg ggtttaacag gtaaaaaagc attgcggttt aaaatcgctt ttatcaatgc
     7021 ctttaatgaa atggaaagaa ttattaaaaa tcaatacaca ccaaaactag aaaattataa
     7081 taaatataag attcctaata caccatatag agaaaatatt attaaagcga ttatgcaaac
     7141 tgaacaaaat cgtaattgtg aatttgaaga gctaatcgca tatgaaatta aagaaatata
     7201 taaagacaat aaatctcata tcgaacaaaa aattaatttt agagcgaaag gattaatatg
     7261 aaaaatttta tttttggtgt taataaagcc atagggaaat ctcaccccca taaaaatggg
     7321 gcaaggctaa aaagccttga ctataattat acaaaggagt ataattataa ctatgagatt
     7381 tgtgtaactc aatttaacca cctcttttct gaggttaaat ttagccacag ggttgcagcc
     7441 ctatggctaa ccccaaaaaa ttatactcaa aaactcaaaa aactttcttt aattgcgtct
     7501 ttacttttat ttattggtag taacgctttt gctgatgatg ttttaactgg ggatacaaaa
     7561 ttggcatgtg aagcgatttt gtgcttaagt agcggaactc gtcctgctga atgcggtcct
     7621 tcgttagcta gatattttgc aatacacttt aaaaaaccct ggaaaacaat tgatgcaaga
     7681 agagcatttt taaatttatg ccctatacaa aatgacgcaa acatagaaga tttagtgtta
     7741 aataacttag tcgatgatgt attacctgta agtgatccta ggcaatgcac accaaattat
     7801 ttaaacacgc aagtagaaac taaaagaagt tattctactt ttggaattat gagctataga
     7861 atcaatccaa atatgcctaa cttttgccac gcattaatca accatgctta taccgattat
     7921 aaaactccaa aatataaatg cacaggggaa ttttacaatt ccttagaatg gaaactaagt
     7981 gcaaaattac agcttataac tcaacaagct tatgaaagcc tttctgacga tcaaagatat
     8041 atgatttctc gaacttgcgg agataggaat tgttatgact attatcaaaa aataccattc
     8101 actaaagaat gctggactta ctaaaaggag tagatatgag caatacaagc ataatcaaca
     8161 taaacaatca agaagttatt tttgaaaaca aagacgaaca agttttttgc acaagtttag
     8221 atgtggctaa ggtttttggt aaacaacata aagatatttt agaaataatc agaagcaaaa
     8281 taagaaataa agaaattcaa aattttaacg ggcggaattt ttcgcccgtt aaatataaag
     8341 atgctaaagg agaaatgaga ccagcatatc aacttacaaa agatggtttc tcatttatag
     8401 ctatgggatt aacgggtaga aaagcggata aattcaaaat cgctttcatc gacgctttta
     8461 atgaaatgga aagaattatt aaaaatcaat acacaccaaa actagaaaat tataataaat
     8521 ataagattcc taatacacct tatagggaaa atattattaa agcgattatg caaactgaac
     8581 aaaatcgtaa ttgtgaattt gaagagctaa tcgcatatga aattaaagaa atatataaag
     8641 acaataaatc tcatatcgaa caaaaaatta attttagagc gaaaggatta atatgaaatt
     8701 ttaatttttg gcgatacaaa ataaacatta aaaatttaaa agaaaggaga agtagaagtt
     8761 taagaggtag gttaccgcat aaccccaaca agtagggcaa ggctaataag ccttgactat
     8821 tattatacat aatagtataa taacaatgat tacgcggtca atcatggaca taaaatcact
     8881 cactttcacg ggtaaaattt agccataggg ggtcagacct acggctaacc cttaatgggt
     8941 attctaacta aaacctactt aaacttcaaa aatatacaaa atgaaaaaaa ccaacataga
     9001 aattgtttaa tcaatcaaaa taaatattaa aaattaaaag aaaggagata aataaagtta
     9061 gtataaaagc caaagggttt ctagtaaccc ccttaaagaa agggagaagt caaagctaat
     9121 aagccttgac tattattata catagtagta taataattac tagaattttg ttaatcaagg
     9181 tttctcacct tctttctaag gcaagttttg attaaccaaa ggctggaacc ctttggttaa
     9241 tcagccttaa ctgcaattat actaacttat ttcaaaatta caaatgaaaa aatctttatt
     9301 tggcgtaaaa aaagccactt caacaataat tgcaacttta attataggaa ctaataatgc
     9361 ctttgcaggt ggtattcctg ttattgatgt tagcgctatt gccaatcaag taaaagatta
     9421 tgcaatgcaa cttcaacaat acgagcaaat gtattctcaa ttgcaacagc aaatacaaat
     9481 ggtgcaaatg caaaaacaga atttagaaag attaactaaa gaagattggg ataacttagg
     9541 aacggttctt tatcaaaccc gaaatgtaat gaacaaagta aatggaattt cttatgatat
     9601 aggtaatgtt tcgcgcaaat ttgaagatac ttacaaaaat tttgaaggtt atagtaatga
     9661 tcttgaaaac gcaacaaatg aaagcgagag aaataaaatt tattctgata gatacaagca
     9721 aattgcggaa acaaaccaaa atacatttaa cggaacattg caacaactcg agcttcgata
     9781 tcaagactta gaaagtgaag atgtgcttat cgcaaaactt aagcaaaatt cacaaaattc
     9841 taatggaaat ttgcaggctg tgcaagccac caatgatctt ttagcttatc agattgatga
     9901 gataagaaaa ctaagatcgg tcattatgga tcaaagcaat atgcttacta attatttagc
     9961 gtcgcaaaat aacaagcaaa ttttagaaca agcaaaaatg gaaaaacttt ttcaaagaaa
    10021 taaaaacaat aatttttatc aatcaaattc tgatgctttt aaatggaaat aaaatgatgt
    10081 taaaatattt tgtttctata ttaaatcaag gagaaaaaca atgaaacatt ttatttttag
    10141 cggattaatt ggtttaggtg ctttggcttt tttagcaggt tgtggcgatg aggcaaaaac
    10201 aagcgattat tataaagcgc acttagacga ggcaaaagct agagttgcag aatgtaaaaa
    10261 aatggagaaa atgaatgaaa ctcaacaaag ggattgctct aatgcaaatg aagcggtatt
    10321 atttcaaaga gacaaaaata ataaatttta tcaatcaagt cctgaagctt ttgaatggaa
    10381 gtaaattagc tttagtttta tttttatgct ttttgattcc aaatttagct tttggggctg
    10441 aaagtcccga aggggcgtta acactaatca aaaatggact cttatcttgg acacccctta
    10501 ttaaaaccgc ttgtttatgg gtgttttgga ctttagttgc tattgatttg atttggactt
    10561 ttggtttaaa agctttgagc ggttttgaat ttggagagtt tttaaccacc cttattaaaa
    10621 aaataatata tataggcata ttcctatttt tatttaacac agatcaatgg ctacaaatta
    10681 tttttaatag cttttcgcaa ttagccacaa atgtaaataa tggtattgat gttaaaccta
    10741 acaatatcat aagtacagca attgatgttg taatcactat actacaatct gcaagtattt
    10801 ttagtcctgt tcaaagtttt tttattgcta tctctggaat tattattcta atatcattct
    10861 tattaatggc aattgatttg ctgattgtct atttaaaatt tttcttaatg aatgtaattg
    10921 tattttttgc tttggcgtta ggtggattaa atcattttaa acaaataggc ttaaatccta
    10981 taatgacagc cattaaagta ggtgtagaac tctttatgat acaaggatta atgggaattt
    11041 gctttactat gataggagca atagcgaatg aaattaatca aaatattact atagaaaata
    11101 tattaatcgc attagttacc cctgtaatct tctgcataat tacaaaaatg attcctggca
    11161 ttattgaagc cgtatttaat ggtagtattg gagaaagcgc aggcgctgcg gcaggattta
    11221 gggcggttgc taccatggca gcaggtgcag cagcaggtgc agcggcaggt gctgtcggca
    11281 ttactcgtgc tatgaatgca gctaaagcct tgcatttagc agaaggtgga gctggtggaa
    11341 tggatttagt taaaggagta gctaaaaatc tagcaagtgc gggaggcgaa catttaagag
    11401 ataatcttac aagaggtaga atgccaaacc aaatggctaa tcgcttacaa gaaaagctta
    11461 aagatataca aggaaaaaca ggtgaaggcg gtatatcagc aggaacacca aaagaagaaa
    11521 gctatcaatc aggagtaaat cccgatgttg caaaataata aaactaacgc aagggtggta
    11581 agtccttgca ttagcgtttc acaaacggcg ataatttact ttttaggctt aaaaaagatt
    11641 tttcttattt cttctctaaa aagtgtaatt actactgcaa ttaccgcaat gaaaagatta
    11701 aaaagttcca ttatggactc ctgtaaaata aagtgtttcc accccaagcc caacttaata
    11761 gccaaaaaaa aagctcaatt cctattgaaa gaattgagcc aaacacatta taaacaggtt
    11821 gtgaaacttt tagtccatct accaaatgga ttaaattaat tatatcataa aaaggagtaa
    11881 aaaaaataat gaatattttc agacaaaagc aaaagataga aaagaatgag tttgacactt
    11941 caagtaatcc ttatcttaat gcaaaaaccg aatggctaga aagatacgga gattatatca
    12001 ctcgtgctaa aaactggcaa atggtagcga taattagttt agccatgtgc tttgtatgtg
    12061 ttctctttat aggctatatc ggctctcaaa acaagcttat cccttatgtt attgaagttg
    12121 ataagttagg caatacagct aaagtaggaa tggtgcaaaa tatcgactta aaaaacccaa
    12181 atgtaataaa gtatagtcta aatactttta tttattcttg gcgttcggtt tggggaaatg
    12241 ccgaaactca aagaaaattc atatttgatg cctatgctta tgtggagcca agatcaaaag
    12301 catttaatta tttaaattca gaatttcaaa aaaacaatcc tttcacacga tctacaaagg
    12361 aaaatgtgcg agtgaaaatt aaaaatatcg ttccacaaaa tattgacact tggcaagttg
    12421 aatgggaaga gacgactaca aatttaaatg aagatattct ttctaaagaa acttatcgag
    12481 gattaatccg aattaaacaa atcattccaa atacagaaga acaaatttta aaaaatcctt
    12541 tagggatttt catcactgat attaattttg caaaaatttt ataaggagtt aaatatgaaa
    12601 aagtttattt ttaatacaaa tacagccaca agggaaatcc accacacccc aacaagtggg
    12661 gcaaggctaa aaagccttga ctataattat acaaaggagt ataattacaa ctatgatgaa
    12721 ttttatggca ttcatcttag ctcctttagg ggcttagatt ttcgccacaa gggtgatgac
    12781 cttgtggcaa acaccccaaa aaattatact caaaaactca aaaaactttc tttaattgcg
    12841 tctttacttt tatttattgg tagtagtgca tatgctaaca atctaaatga aagagatttt
    12901 tcaaatctta caccaaaaga aaaaaaagat ctagcaatag cacaaaaatg gataaattca
    12961 aaaactacta ctatacaagg aaataatgga gaagtaattt ttctttttgg tgaatcaatg
    13021 ccaagtattg taactgcacc cttaagactt actgatattg ctttagaacc tggtgaagtg
    13081 attaaagatg tgcaaatagg cgatagtata agatgggctg tttcattaag cgtaagtggt
    13141 gaagagcctt atttaatctc tcatatcatc attaaaccta cggataaaaa cttacaaaca
    13201 actatgaata tcatgacaaa taagcgagtt tatcgcttaa atttaatatc agaagctaag
    13261 aaatttatgc ctgcggtttc attcaattat ccaaatagta tcataaaaac tcttgaagat
    13321 tataaaaatc aaatgaaagc aaaatcagaa tctaaaaatt tctataaaac aaaagatgat
    13381 gaaattccga gcaatattga aaatttggac tttggctata gtgtagaagg taatgcacct
    13441 tttaaacctt taagaattta caatgacggc ataaaaactt atattcaaat gccaaaaaat
    13501 ttaaaattct atgaagcacc tgcgcttatg attttagatt ctagtaatga aaaacaaatc
    13561 gtaaattatc gcttgaaata tgatactttt attgtagata ggctttttaa caaagcgatt
    13621 ttactttcaa atgtaggctc aaaacaagaa aaaattaaaa tcacaaagca ttcaaacaaa
    13681 gctaatcaag atatagttaa taatgtgctt tatgacttat cactccaaaa taaaaaggaa
    13741 aacaaatgaa aattttattt ttggcgttaa tcgctttctt tataacctcg tgtgctaaaa
    13801 tgaattcgga ttattttaac tctagctttg cagttgaaga aacaaaaata aactacaata
    13861 aaattgcaga cgatttttcg cagttcatta tttcatatta cgcacctaac aaaactacat
    13921 tttttatcaa tgaagataaa aataatcaag atttttctaa ctattttatc aataccttaa
    13981 gaaaaaaagg ttatgcaata agcaatgaca attctaaaaa agatttaacc ttcttaagct
    14041 atcaaatttc acaaattgat aatgaaaata tagttgcgat atttaatatc aatgaaagta
    14101 aaatcaatgt gatttataaa atcatcgaaa ataaacttgt aaaaccaaat ataacaagtt
    14161 ttaattttac tccaaaaact aaaggttaaa ttatgcttga agtgaatatg tctcctaaca
    14221 aatttttacc aaaaaataac aaaaggcttt cgaaagttcc tattataata atatttgcaa
    14281 tcatcgcaat agtattattt agcatatttt atgtagcctt atcaagaaag caaaatttag
    14341 aaagacaaac tgcgcaaacc acaccaaaag aggaaacaca aatagctaca aatcataaca
    14401 atgatcttaa tttatatatt gacgaattac aagttcaaaa agcacaagaa aataatgtaa
    14461 tttcaccacc tatgccaaat gccacacaac aacctattca agaaacaaat tctcaaacta
    14521 cacaacagcc acctaacaat actcctatcc ttgtccaaaa caatgctata gatgaaaaag
    14581 aaatgaagat taaaaaagat atgcagttaa aagctttatt aagcaatacc aagcttgata
    14641 tcaaaacaga agcaacggat agcaaaaaaa accaagcaat taatttcaat ccacctaata
    14701 ataatgaaga tattaatctt ggagcaatca atccacaaaa tacaggactg ggcttagaaa
    14761 gtggcacaaa caaagatgtg caagggcaac aatttttatc tcaaaaaaaa gacaatggct
    14821 atttaaaata tgtaaaacaa aaaccattaa gcacttatga aattaaagcg ggttggaata
    14881 tacctgccat tttaattaca ggtgttaatt cggatttacc tggtcaaata ttggcacaag
    14941 taacacaaaa tgtttatgat agcgcaactg gaaaatacct tttaattcca caaggaacta
    15001 aagttgtagg agcttattca agtaatatta tttatggtca atcaagactc ttagtagcat
    15061 ggaataagct tatttttccg aatggtgata ccttaaatct tgatggcatg caaggaactt
    15121 cacaagatgg atatacaggc tttgaagatc aagtggataa tcattatttt aggattttcg
    15181 gctctgcttt tttactttca tcgatcagcg caggtattgc gttgtctgat aattcagaca
    15241 caaacagcga aaaagaaact gcttcggata aagcaatcgc acaagctatt caacaaatgg
    15301 gtcaagtcgc aagcgagatg ataagaaaaa atatgaatat cagccctact ttaaaaattc
    15361 gtcctggata taaatttaat atctttgtaa ctaaggatat tattttagag cctttggagt
    15421 taaataatga ttgatattgc tctaattgaa caatgcaaaa atccaaattt agaaacacaa
    15481 atcatacaaa agattattca agtagaaagc aacaatcaac aatttgcaat taacattaat
    15541 aaggttggct cttttatatt aaaaaataaa aaagaagctg aaaatttagc gaacaatttc
    15601 attaaagggg gatatagtgt agatattgga ctaatgcaat ttaattctaa caatcttaaa
    15661 tcttcaacat tctcacatta cagtgtagaa gatttattag atacttgtaa aaatattaaa
    15721 gcgggtagtg atatttttta tttggcgtat gaaatgacaa ataaaaatct agcgaaagaa
    15781 gatcgtataa atcaggcttt aagtatttat aatactgggg atttaaaaaa aggattttct
    15841 aatggctatg tagctaaata cgattcaaca gcaaaaacga tagatgactt ggaagaaaaa
    15901 gcaagaaaat cggacacaag aattaagatt acttacaatc ttttcaattt gcaaacacaa
    15961 aaaaaggagt aaaaatggaa aatgaaaatt tggaagaaaa taaacctaca caatttgatg
    16021 ataatgagcc aagcttattt gataacttag aagatgagga gcaagataat gattaataat
    16081 attacaatag gcggaagatt aacagctgat gctgaattaa gacattgtaa tcaaggtagt
    16141 atcatatgca cctttacctt agcaaacaac agaaaataca aagagataga aaattcaact
    16201 tatatcgaag tatctctttt tggttctttt gctaatgcca tgcacccata tttaaaaaaa
    16261 ggcatttcag ttgatgtggt tggagaacta actcaagaca cttgggagca tgaaggaaaa
    16321 atttactcaa aacaccgaat aaaagcaaaa gagatagatt ttagaacacc aaaaaaagaa
    16381 aaacaaacaa tacctaatat tgaagaagga gaaaattatg aaggatttta aagaactaga
    16441 aacaatacca aatttcagct atgaggttga tccattaact gctgaagaat taggtgcatt
    16501 taaagaaaat gccttaagcg aagatgatgc caaagaaggc acagaagatc aaggataatt
    16561 tcatgaaaaa taaggatttc atacaagaaa cagccgataa aatcatagaa agcttaaaaa
    16621 atggaactgc accatggatt aaaccttgga aaggtattga tctagctaac aatatgcctt
    16681 ataacccgat tacaaacaag ccttataacg gcataaatag cattaattta atgctacaaa
    16741 attataatga tcctaggtgg cttacttata aacaagcaca aagtattaat gcgcaagtta
    16801 gaaaaggtga aaaatcgact ttgattcaat attggcaatt tagcgaaatg gttgataaat
    16861 tagatgagga aggtaatgtt attacaaatg aaaacggaga agtagagcaa atcgaagtaa
    16921 aattagagaa tcctaaagta tttttcgctt atgtttttaa tgccgagcaa atcgaaaata
    16981 tgccaaaatt ggagcaaaag caagagattg ataattttca aataattaaa gaagcgcaaa
    17041 aaattttaga tgattcaaaa gcaattattc atcacaaagg aaatagagct ttttataatg
    17101 ccgcaaatga tactattaca ctacccccga aagaaaattt tttaagtgaa ggcgcttact
    17161 atacaactgc tttgcatgaa ttaggacatt ggagcggtca tgaaagtcga ttaaatagag
    17221 atttaaaaaa cccttttggt tctaaagaat acgccaaaga agaattaaga gccgaaattg
    17281 caagttttct atttaatggt aaaataggct tagattatga tccaggacaa cacttatcat
    17341 atattgatag ttgggtgcaa attttagaag ataagccaaa tgaaattttt aaagccactt
    17401 cagacgctac caaaattgtt aattttattg aaagtctttc tttggagcaa aaacaaaaaa
    17461 tagagcttga aaattcaaat cctcaaaatc aagcgcttaa acaagataag gagttaaact
    17521 tggcaactag aaaaacttac ttatatgttc cttttgagga aaaagaattt gctaaaaaag
    17581 caggtgcaaa atgggataaa gaagctaaaa tgtggtatgc tcctaagggt gcggatttaa
    17641 aaaatttcac tcaatggcta aatcaatcac cattaacaca aagttacaac aatactcatg
    17701 atgaatttaa agctttttta gaaaaatatg agcttaatat tgaaggtcag cctataatgg
    17761 acggcaaact tcatagagtt agcgttatag gggataaagg gagagaaaaa agcggagctt
    17821 atgtaggttt tttaaatgga caccctgcag gatttgtgca aaattacaaa actggtatta
    17881 aagaaaattg gaaaagtgct aattctttgg aaaacaccaa aaataaagaa ataaatctgc
    17941 aaaacgcttt agaacataat aaagccttaa aagagcaaag agataaagaa ttaaatcaag
    18001 cgtatgaaaa taccgctgtg aaattagaaa atgaatacaa caatgcaaga tgggctaatt
    18061 cagaacaccc gtatttaaaa gaaaaaggct ttgataaaaa tttttatctc aaacaagaca
    18121 aaaacggcaa cttattgatt cctttaagag atattgaagg caaatattgg gctacgcaaa
    18181 gaatcttcgc taatggtgat aaaatgatag gagctacacg cacagcagaa gaaaaagagc
    18241 aaggcataga ataccctgcg aaaaagcaag gtaatttttt cttacttggt gcaaagaatt
    18301 taaataatgt caatgaagtt tatatttgtg aaggatttgc gacaagtgct agtgtctatg
    18361 aagctacaaa atctcctact ataatgggag tagatgctgg aaatttagaa attatcgtaa
    18421 caaatataaa agaaaaatac cctaaaatga atatcattat tgcaggggat aatgatgtaa
    18481 aaaaagaatt aaacggcaat aagaatgtag gcaaagaaac agccttaggc atacaaaaaa
    18541 aatatcccga agtaaaagtt gtattaccaa attttacaaa tcaagaagcg caaaaaggtt
    18601 taagtgattt taacgattta atgaaaagca gaggattgga agaaattaaa aagcaattaa
    18661 aagaacaaat tgcaaagcaa ctaatggttg aaaaagccac tactaaagcg ctagataaaa
    18721 ataaaggtat caataaagag ataacagcca aaaaagatat agggatttct ttatgaaaaa
    18781 acaaaccaat caaactttag tttatatatt ggcaataact ggtatcttac tcgcatttat
    18841 cataataagc caaattgcaa cgcaatattt ggcaaaatct tttaattact ctcctagttt
    18901 aggtgaaact ttactttatg gattttataa tccttttaag tggatttctt ggagttatac
    18961 ttattattct ttttatcctg attttttcaa aaaattcttc atggtaatgt ttgcaggtat
    19021 tgcattttgt tttattgttt ttattttggt gaaacttgcc tttttgcgta aggcaaaagc
    19081 aatagaaaat cttcatggat cagcacattg ggctacttta gaagaagtta aagaaagtgg
    19141 cgtatttgat aaagataaag gcgtgtatat cggtggtttt gaacacaaaa aaacacttca
    19201 ttatttacga catgatggtc ctgaacacgt aatgcttttt gcacctacaa gaagcggtaa
    19261 aggcgtaagc ttacttttac ctacactttt atcctgggaa gagtctgcac ttatttttga
    19321 tataaaaggt gagctatggg ctttaactgc gggttggcga caaaaatacg ccaaaaataa
    19381 agtattaaaa ttagatccga cttgtttaga tgatagtgcc gtaaaattta atattttaga
    19441 agaaataagg ttagaaacaa tgcacgagat taaagacact caaaatattg caattaatct
    19501 cattttcaaa ggcgaaactc cccctactaa tcctactcaa ggaagcacag cttattttaa
    19561 aagtgaagca gcaaatttct tagtttcaat tatactttat gctttatatt tgaaaaaaat
    19621 tcaaggcaag aatcccccaa atctaactga tatttataaa ttcatcaatg atccaaatca
    19681 aagtatcgat gagctattag aagaaatggt tgaatgcgat atttccacga tggataaaaa
    19741 tacacaagaa attattcaaa gcatttcaag atcaatgaaa aataaagcca ctcaagaatt
    19801 aagcggtgta ataggaacag cttcggaaac tttaaatctt tatattgatc ctatcttagc
    19861 aaagaataca gcaaaaagcg attttaaaat caaagattta atgaatcatg ataaccctgt
    19921 tagtctttat ttgatcattc caccaggaca aaaagataga ctgcgtcctt tttttaattt
    19981 actcattaat caaattttta gaactttaac tgatgattct ctaaatttta aaaatggaga
    20041 aaatgtgaaa agatataaac ataaaatgct agtcttagct gatgagctaa ctatgtttgg
    20101 aaaattagga gtgcttgaag aaaatcttgc ttatatggca ggatatggaa tgaagtttta
    20161 cgggtcgatc caagatatac aacagcttta ttctatttat ggcgaaaaag aaacaattat
    20221 ttcgaactgc cacataagaa tagcatttgc accaaataaa atcgaaactg caaaactctt
    20281 atctgaaatg ggcgggatca caactattgt taaaaaatct atcacaagct ctggaaaaag
    20341 aaccgctgta atgcttggca atgttagtga aactatacaa gaagtgcaac gccctttaat
    20401 tactgctgat gagtgtatgc gattgccttc agctaaaaaa gataaagatg acaagataat
    20461 cgctcctggt gatatgttaa tttttgtagc aggtcaagca cctatttatg gaaaacaaat
    20521 tttatacttt aaagatcccg catttttagc aagatcaaaa gtaatactag ataaacaagt
    20581 cagcgatatt ttataaagga gtaaaaatgg caaaaataca ttttgtttta aatggcaaag
    20641 gtggtatagg aaaaagcttt ataagctctt tactatgtca atatttttta gataaaggag
    20701 aaagtatagt cgctattgat accgatccta ataatacaac tttacttaat gtaaaagcct
    20761 taaaagctaa attcttgcaa cttattgatg atgatggcaa atttgatgtc cgtgcctttg
    20821 ataaaattgt agaattagct tttgaaaaaa aggctaaaaa ctatattatt gatagcggtg
    20881 caactacttt tataccttta attgattacc ttaaagaaaa tgaagtttta gactttttaa
    20941 caagcaatag tttagaagtt tatatgcatg tccctatcgt aggcggacaa gcgagagatg
    21001 ataccatttt gggattaacg caactcacac aagcttttaa ttgctctttt gtggtgtggg
    21061 ttaatgaata tcatggatca attatcaaag acaattcaga gtttgaagaa actaaagaat
    21121 atcaagctat caaagaaaaa atcaaagcta ttatttatct taatgcttta agtaaagata
    21181 ctttcggcaa agatctttta gaactcactt caaagaattt aacttttggt gaagctatgc
    21241 aagataaaag cttttctcta atgtcaaaac aaaggcttaa aattttcaaa gataaagcgt
    21301 ttagtcaaat aggtaatata ttataaatta atatcattat gatatcatta tgatattaat
    21361 ttaattctat tttaatatca ttatgataca attatattta ttattataaa ggagtaaaaa
    21421 tgcaaaaaca atatcccgaa gtgcatagct tagaagaaag ccttgcgata cttaaaaaat
    21481 ataaagatga tgtaaataag gaagattatg aaggtataaa atctgttata agtaatcatg
    21541 cgatagagag tatttacatg aatgaattag atattatcgc tatgataaaa caaagtgctt
    21601 taaagttaag tgctgatgaa atcattgctg aatataagaa aaagggattt gtagaatatg
    21661 aaagaaaaca atgaagaact ttttaaaaga ttaattacag ataataaact cggtataaaa
    21721 gatgaaaaat tatttgataa agaatcaaga ttttatactg gtttaagaga aagagagctt
    21781 acgctcaatc ctatcaaagg caatttcgat tatcagcact taaaaaatat acataaacat
    21841 atttttcaag atgtatttca atgggctgga aaagatagaa tggaagtagg cttgcatgga
    21901 aattttggaa aatatgcacc aaatggaaca attactaatt ttgttcctgg aaaagattta
    21961 aatgcaaccg ctcaacaaat ttttacttgg cttaaagaag acaattactt aaaaaattca
    22021 aaagatctta acgatttcgc aaagaactta gccgaatttg ctagaaatct aaatgctttg
    22081 caccccttta gagaaggtaa cggcagaact caaagaatat ttttaaatga gttggctaaa
    22141 aatgcaggtt ataaacttga tttaaattta ataccaaaag ataaaacgat aatggcatct
    22201 gtagaagctt cacaattgaa attaggaaaa cttgaagcca taattaaaac caatctaaaa
    22261 agctttagac aaaacttaga tttggagcaa aataaaggaa tgtcgttata atactatgag
    22321 aaaagccatt gcgatatttg ccttttcttt tgcgtttctt ttaatactct catatcttat
    22381 tttttatttt ggtggttttc attttaatta tacaagatca atgcctttgg gcttatacaa
    22441 agagattaac tcttccactt taaacaaaaa cgatattgtg cttttaaaaa taccacaaaa
    22501 gaaagaaatt ttattaaaaa agattatcgc agtaaatggc gattttgtag aagttaatac
    22561 gcaaggtgtt tttattaatg aaaatctttt gcctaattct aaaatttttt catttgatag
    22621 cgaaggtaat ttactagaat ttaaaccctt taaacgcaaa ttaaaagaaa atgaactttt
    22681 tgtaataggc gaaaatataa aaagttatga tagtaggtat tttggagttg ttaatatact
    22741 ccaaaatgaa gtaaaaaaag ttaaattaat gatatcattt taatattaat gtaatattaa
    22801 aatattaatt atttaatatc aaaataatat cataaaagga aaataaaatg aataaaaaag
    22861 aacttattga agaaattgca aaaaaacacc atataatcct agatgaaaat gatcctatac
    22921 ttgcagtcgt tagtgcaaat gaaatcatct ttgatgattt tttaaaaaaa atagatctac
    22981 tctttataaa acacaaaaca gatttagaaa gctataaatt caatatattg aatgaaataa
    23041 gagaatatag caaaaacaat caggaaactt taaaagatat tttaatacaa gcacagacaa
    23101 atcaaaacac aattaaggca tcacaagaaa aaacagaaga caccaaagaa aagaaaaata
    23161 caaatattaa tttttggatt atcgctattg ctagccaaat tatttttctt cttgttggtt
    23221 taatcatagg tatcataata taatattatt ttattattct tttaatattg tattaatatt
    23281 attatgatat tattatgata ttattttaat ttaaactaaa aacaaggttt tattatgatt
    23341 atatccatag taaatgaaaa aggcgggagt ggtaaaacta cattagcagt aaatctttcc
    23401 gcaagattag ccgaagatgg agacaatgtt ttacttattg acgcagatcc gcaaaaatcg
    23461 actgaagttt tttcggatat gagaagtcaa tcaaatttag agcctttatt ttcaaatgtt
    23521 tcgaaaacag gcattagttt aggcgatgag attaaaagaa tgaaaaatgc ttttgatagc
    23581 attatagttg atacaggcgg tagggatagt aaagaaatgc gaaaagctat actttcatca
    23641 aatatcatta tcattcctac aattccaagt caatacgatg ttaatgtgct agatcatatg
    23701 ctagaaattt ataatgaagt gattgaaatt aatcctaatt tattggcttt ggttttagtc
    23761 aatagggttt cacctaatcc ttttttagca aaagaattag aaaatttaaa agaatacatt
    23821 aacgaagcta aaaaagaaaa gggcttagat agagtaataa tgcttgaaag cgtaatctat
    23881 gaaagacaag cttatcgcaa agcagtaata gaaggtaaaa gcatgaaaga attttgcgat
    23941 aaaaacgaca aagctttaaa tgactttgaa aacttttacc aagaactttt aaaaatagca
    24001 aatgaaaaat taggagtata ataatgggat ttaaaaaact aagttcagaa gcaccaaaaa
    24061 atgaaaatga ttttgttaat tctgctcgtg gagaaacagg aaatgcaaaa acaggaaatg
    24121 caaaaagaaa taaaaagctt atgataaatt ttacagaaga agaataccaa attttaaatc
    24181 aagaggctca ttcaatgggc ttaagcttaa attcttatgt aagatttaaa atttttagaa
    24241 aggagtagaa aaatgttttt agatataatt agcaaaatat tcatatttgt tgcaattcat
    24301 gcaatgatta tatttataat aaaatcacat atagcagtta gtgaat
//
LOCUS       DAQUWA010000019        24293 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.019, whole genome shotgun sequence.
ACCESSION   DAQUWA010000019 DAQUWA010000000
VERSION     DAQUWA010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24293
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.019"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..204
                     /locus_tag="R8X70_000664"
     CDS             <1..204
                     /locus_tag="R8X70_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEF2928467.1"
                     /translation="LLVQSINDMAESIKEQTAGITQINESVAQIDQTTKDNVEIANES
                     AIISNTVSDIANNILEDVKKKRF"
     gene            527..2307
                     /locus_tag="R8X70_000665"
                     /pseudo
     CDS             527..2307
                     /locus_tag="R8X70_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
     gene            complement(2432..3370)
                     /gene="trxB"
                     /locus_tag="R8X70_000666"
     CDS             complement(2432..3370)
                     /gene="trxB"
                     /locus_tag="R8X70_000666"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEF2928468.1"
                     /translation="MLDVAIIGGGPAGLSAGLYTTRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQISKNEDGSFTIRLEGGKTE
                     LAKAVIVCTGSAPKRAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEA
                     LYLANICSKVYLIHRRDEFRAAPSTVEKVKKNEKIELITSASIDEVYGDKMGVTGVKV
                     KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDGKFLCNMEEGGQVSVNLKMQTNVPGL
                     FAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESLH"
     gene            complement(3506..3820)
                     /gene="trxA"
                     /locus_tag="R8X70_000667"
     CDS             complement(3506..3820)
                     /gene="trxA"
                     /locus_tag="R8X70_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEF2928469.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            complement(3875..4213)
                     /locus_tag="R8X70_000668"
     CDS             complement(3875..4213)
                     /locus_tag="R8X70_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEF2928470.1"
                     /translation="MGFASYLSGILGEDKACEFLKKQKFEILKRNFRSKFGEIDIIAK
                     KDGILHFIEVKFTQNNYEVSERLNVKKYEKILKTIEFYELKHGILDDFQMDLICISDD
                     MIQFFENISF"
     gene            complement(4213..5463)
                     /locus_tag="R8X70_000669"
     CDS             complement(4213..5463)
                     /locus_tag="R8X70_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEF2928471.1"
                     /translation="MKVAILGYGVIGSAVARVLIQNKEIIRARCGQDIIPVVALAKSQ
                     KENTLIPIVTNVDEILQRDDIDVFVELMGGVETPFKIISEILKKNKPVVTANKAMLAY
                     HRYELEELAKNTTFGYEASVAGGIPIIKALKEGLSANNILSIEGILNGTSNYILSAMN
                     SKGLNFDDVLKKAQELGYAEADPTFDIEGQDAAHKLLILASIAYGLRAKPEDILIEGI
                     SKISAEDMYFAKEFDFTIKLLGIAKAQNSIVELRVHPTMISKDKMIAKVDGVMNAISI
                     VSDILGESLYYGAGAGGNATASAVIADLMDIARNEPKGPMMGFENNLNFKLLNRDEIY
                     TKYYLRLKVEDKTGVLSKITQFMSENNISIDSFLQKPKQGETYSTLFFTTHHTFEKSI
                     QNLLSILEKQDFIKAKPFMMRIEE"
     gene            complement(5465..6670)
                     /locus_tag="R8X70_000670"
     CDS             complement(5465..6670)
                     /locus_tag="R8X70_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HEF2928472.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGKDIIDFSMGNPD
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYGVNLDPESEVVATM
                     GSKEGFVNLARAIINPGDVAIVPAPAYPIHTQAFIIAGGNVAKMPLKYNEKFELDENK
                     FFEDLDKTLHESIPRPKYVVVNFPHNPTTVTCEKSFYERLVATAKKERFYIISDIAYA
                     DLTYDDYKTPSILEVEGAKDVAVETYTLSKSYNMAGWRVGFTVGNKRLVAALKKIKSW
                     FDYGMYTPIQVAATIALDGDQSCVDEIRATYDKRMHILLEAFENAGWKLHKPRASMFV
                     WAKLPESKMYLKSLEFSKQLLQHAEVAVSPGIGFGEAGDEYVRIALIENENRIRQAAR
                     NIKKYLKEE"
     gene            complement(6683..7489)
                     /locus_tag="R8X70_000671"
     CDS             complement(6683..7489)
                     /locus_tag="R8X70_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928473.1"
                     /translation="MVKKIFIFLFLANSVFAVSSLELVKNLVANPSKDSQLRLLFPSS
                     SYMDNKGNPDIAKISRILKTNSLINLTLPEPRTLKLNFKAKADSVVFFKILTDALTNL
                     GYIYFIPTDMILRDGNIDYTIQVESQYILDPGALYALLKDNSVYIDNIKRIGTYDYEY
                     DLNFENAQLNTNIDLKLNSTQALERPLKDYVFTLQGASNLMIDAHDADFWFPKVLFLD
                     KNLNLIKAVKSQAQNNHFSELIPSGAVYAIVSDMYSLDNIRRGLKITLKK"
     gene            complement(7483..8430)
                     /locus_tag="R8X70_000672"
     CDS             complement(7483..8430)
                     /locus_tag="R8X70_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928474.1"
                     /translation="MLNWKKIEDLNLKEVAARTKIELEFLEALVKKDFATLNRFNVRG
                     FVKILSREYELDFTDFNEEFETYLNENNLNDTTTKPKMITPKLDAYSQKSTSFVSFII
                     IVIIIALIGFGIYYFDYIKSFFQKDQNNSSAAVVDIIGKAQSNLKALENNVVVIDNQA
                     EENETEANLTQIQNTELNNTKEEIKQISTTPNNTNANEENLSTNDSLATTNQEVAEVS
                     KALNKEAHFKASGKIWIGLIDLSNYRKTSLVKENDFNLSLEVNRLVLTGAAALSVFDE
                     NGKEQKFPAGNSKRFLIKDGKITSISAAEFMKLNKGKEW"
     gene            complement(8423..9106)
                     /gene="rlmB"
                     /locus_tag="R8X70_000673"
     CDS             complement(8423..9106)
                     /gene="rlmB"
                     /locus_tag="R8X70_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEF2928475.1"
                     /translation="MIVYGKQIFFYILERHKELINELYLAKECDKETFKKIASSGFKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKEYEFKDLHTLKKGEFIAILYGISDVGNIGAIVR
                     TAYALGVDGLIFIGERLAMEGVIRTSSGAALDLEIALNNDIFTVLNELKQVGFKLFAS
                     ASGGKQIHHYKVDKGKKALILGSEGLGLSAKIIKKCDECVGIEMKNNFDSLNVSVAFA
                     ILCDRMINA"
     gene            complement(9119..9943)
                     /gene="rsmI"
                     /locus_tag="R8X70_000674"
     CDS             complement(9119..9943)
                     /gene="rsmI"
                     /locus_tag="R8X70_000674"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEF2928476.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCDIFFCEDTRVSKSLLSLL
                     SSKFEIDFGDKKFISFHTHNEKKVLENLDLEFFNQDIAFLSDAGMPGISDPGQFLIDF
                     ALENDIQFEVLPGANAALVALVSSALCEKEFIFMGFLANKGKERQKDIQKILNHPYPS
                     VIYESPKRILSLIEQIAILDSQREVFVIKEISKKFEAKFKGKAIDLFNELKQVNLKGE
                     WVVVLAKNDKDNISHSLCENDILELEIPLKTKSKLLAKMNGKNPKEIYQKLLLSQS"
     gene            complement(9946..10146)
                     /gene="rpmE"
                     /locus_tag="R8X70_000675"
     CDS             complement(9946..10146)
                     /gene="rpmE"
                     /locus_tag="R8X70_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEF2928477.1"
                     /translation="MKKEIHPEYVECKVSCACGNTFVTKSNKSELRVDICSSCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            complement(10225..10878)
                     /locus_tag="R8X70_000676"
     CDS             complement(10225..10878)
                     /locus_tag="R8X70_000676"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEF2928478.1"
                     /translation="MQFLYHKQAGEEILKLKGEEFAHLKARRIKENEILSLRNLEDDF
                     IYEYKISNLDRNSCLLYFLHKHFKSHPQSELDLALAVIDTKILEKTLPFLNELGVKKL
                     HLVFTEFSQRNFKLDFERLEKIIISSCEQCGRSHKMQIQSYKNIQEFSKVFPDAVLVD
                     FEGEVKEFDKTRLYFIGPEGGFSPKEKQMFKEKICLKVPNILRSQSAAIAVAAKILL"
     gene            complement(10879..11286)
                     /locus_tag="R8X70_000677"
     CDS             complement(10879..11286)
                     /locus_tag="R8X70_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928479.1"
                     /translation="MDKSYEFFLALHLYSLYASGFLMFFYLVLTQGNFKTEFIFIRRI
                     RLFLPIYYVFLALMLFTGSLLLAIKQFQTHLNLWLMIFSWIFIFALAIFHFIQFKKAR
                     RLRRYITFRRISFMILFCELVLLILPFLTGKYL"
     gene            complement(11287..11709)
                     /locus_tag="R8X70_000678"
     CDS             complement(11287..11709)
                     /locus_tag="R8X70_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEF2928480.1"
                     /translation="MGKNLSILISLFAVLFLNACSDDKEFNHKNQNTTEEIVQIEQND
                     EKTEFSDTNLPLPVDDEASISEDYDVNPSVINSLYKQKCATCHGEKGEVKTKKGIAIK
                     NLSSEKFIQRLQNLKDEAHNFLTQEQRENLAKYISKEK"
     gene            complement(11709..12290)
                     /locus_tag="R8X70_000679"
     CDS             complement(11709..12290)
                     /locus_tag="R8X70_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEF2928481.1"
                     /translation="MIIRKLFEFENAHIVRFCSSSRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTHMRQIIDSFDHAITLFNQDDESYLNEMKKYSQRWISLPVNVSAEN
                     FCRVFFILIDALLKQTKMINGEQGVNLQSIIVHETRTGYAQGFKEDAYSPTMPKITLE
                     DIEFSPAIKAEWNDIEFYDKLKNLHIFTNPKEV"
     gene            complement(12287..13030)
                     /locus_tag="R8X70_000680"
     CDS             complement(12287..13030)
                     /locus_tag="R8X70_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEF2928482.1"
                     /translation="MQLVESFLSIQGEGKYSGKLAIFMRFAGCNFNCSGFGVKLIKNG
                     KTLKGCDTIRAVFTKEFNEEYEILNASELFKRVLDLKKDFNPIVVITGGEPLIHHENP
                     EFIDFIQALLKNNFEVHFESNGSIELDFEKYPFYKECVFALSVKLQNSGMGKEKRLNF
                     NALKGFKHYAKDSFYKFVLNSSQLESLSLEILEILEKAPNEIFCMPMGENEQNLKQNA
                     LKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(13033..13995)
                     /gene="moaA"
                     /locus_tag="R8X70_000681"
     CDS             complement(13033..13995)
                     /gene="moaA"
                     /locus_tag="R8X70_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEF2928483.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFNHQPKENLLS
                     FEELFLFVKVAIDEGIEKIRITGGEPLLRKDLSVFIKMINDYKKDLDLAITTNGFLLK
                     DFAKDLKDAGLKRLNISLDTLESKKAKILAQKDVLDSVLAGIDEALSVGLKVKLNTVV
                     LKGLNDDELIPLLEFAKSKNIQIRFIEFMENIHAYGKLQGLKRDEIIQILSQKYQVKL
                     IKKAEKAPVSIYSADGYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGDINAAANILQEVLRNKPEKNRWSVVDNETSSRAFYQTGG"
     gene            complement(14011..14529)
                     /locus_tag="R8X70_000682"
     CDS             complement(14011..14529)
                     /locus_tag="R8X70_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928484.1"
                     /translation="MSNDVFYLVFMIVLLVAILAYMNIKDKESSAKINKLQGVVEDIT
                     KELHYLRKELGVKDEGDQEEEDYKITLLKEEIQITLEKQISAKITPVLRTLKTMEHII
                     EDFQNEQQNRILNLEQKAQSMTKLTPNYDTEEQKIVDLFKEGKSIEQIAKDLRIGTGN
                     VELVLKFKQLIK"
     gene            complement(14522..15022)
                     /locus_tag="R8X70_000683"
     CDS             complement(14522..15022)
                     /locus_tag="R8X70_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928485.1"
                     /translation="MEISLFKAGFEASLECCDIENNHFLQEYLKLGAISQLSKWKKLA
                     LRVDFDEGEKIIFDLLLSLKEDILRLEDSLDKNKDLLVLKQKGVVESLNFEYLNFLDE
                     ILEEGKEYYIRFDLNNQKMAIFAKAQNKKLAQIIKIKPEDRIAFDAFVVQLQRDMIRN
                     KKDKNE"
     gene            complement(15013..15897)
                     /locus_tag="R8X70_000684"
     CDS             complement(15013..15897)
                     /locus_tag="R8X70_000684"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HEF2928486.1"
                     /translation="MNTIWNKFKDILELVVFKHSIFALPFLFSSMIVASKLVNDSAWF
                     GFKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIIL
                     NAIIFILCSYFINTLAFYLSFPVLFVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     VMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKVGLHSIPAKFGSKATLFISAF
                     CHVLAVLFWLLFVWQVWGVALGNIALFGVIISGIILAFEHKIVHKNFAHIDKAFFTLN
                     GYLSIIFFIFIWVDLVWK"
     gene            15969..16838
                     /gene="miaA"
                     /locus_tag="R8X70_000685"
     CDS             15969..16838
                     /gene="miaA"
                     /locus_tag="R8X70_000685"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEF2928487.1"
                     /translation="MFFQIALIGTTASGKTYIANALAKEFNAVVLSLDSLCVYKEINI
                     ANAKPSKDELANLNYFGVNLLSVDEHFNVELFIREYQKAKEFALINDLPLIIVGGTGF
                     YLKTMIDGLSQKIQDTTSTLSNDEIYALLLKIDPAYKIEKNDTYRLKKWLSIYESTNE
                     IPSDFLKKTQKDGVLKDIEIYELVWDREILRKRIEARTKEMIDNGLIEEARMLFSNFD
                     NNLKALNSIGLKECKEYLENQISLKELESLISIHTSQLAKRQRTFNKKFQSTPLEFSK
                     ALELLRNKFLAKE"
     gene            complement(16824..17387)
                     /locus_tag="R8X70_000686"
     CDS             complement(16824..17387)
                     /locus_tag="R8X70_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump"
                     /protein_id="HEF2928488.1"
                     /translation="MDFYSLILLSCALAMDAFAVSLCKGFSVKKLNLKHYIITGVYFG
                     GFQALMPAIGYAIGITFASFIASIDHWIAFVLLSLIGLKMIKESFENENCDTNSNQFG
                     FKIMFALAVATSVDALAIGVSFAFLDVDLFLALFLIGSITFILCAIALELGNKFGTRF
                     RNKAEFLGGAVLIILGIKILVEHLFFS"
     gene            17560..17634
                     /locus_tag="R8X70_000687"
     tRNA            17560..17634
                     /locus_tag="R8X70_000687"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17593..17595,aa:Glu,seq:ttc)
     gene            17795..18202
                     /locus_tag="R8X70_000688"
     CDS             17795..18202
                     /locus_tag="R8X70_000688"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928489.1"
                     /translation="MSHDTNFFLLYFKDKIPKDSLIFLKESLEKASEEQKEKLLFTKL
                     KNPLYGLLFAFLLPGLDRIYNGNIILGILKIISAILVSIGLIIAEDKNDESAMLIFII
                     LVFMLSVWVILDYFLVWKDICQNNLKKIFEVLQ"
     gene            18199..18627
                     /locus_tag="R8X70_000689"
     CDS             18199..18627
                     /locus_tag="R8X70_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEF2928490.1"
                     /translation="MKQDKTILLIFKDKIPEERLFILEEELKKSQKDLSALYAISLKN
                     PLVGLVLSITVGLFGVDRFYKGDILLACIKLAFFIIPLFATFAAFIALLYESHSIFID
                     YFAIFALMFVVASIWKLVDIYLVFVGIKKDNFHKILNFFS"
     gene            18733..19395
                     /gene="sodB"
                     /locus_tag="R8X70_000690"
     CDS             18733..19395
                     /gene="sodB"
                     /locus_tag="R8X70_000690"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HEF2928491.1"
                     /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFASKDLVSIIKSSSGGVFNNAAQVYNHDFYFDCIKPITGCGCGGSCQSMDANLQAA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPL
                     LVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
     gene            complement(19422..20627)
                     /locus_tag="R8X70_000691"
     CDS             complement(19422..20627)
                     /locus_tag="R8X70_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HEF2928492.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFSKITLASRTKSKCDEIA
                     SFIKERLGVEIQTAQIDADDSDAVVELIKKTGAQILLNVALPYQDLSLMDACIKAGID
                     YVDTANYEHPDLAKFEYKEQWARNDKFKEAGILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWEKGEWIETQPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVM
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGIKDGKDRQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMDELNSQGLPWKI
                     IEMTPSLGE"
     gene            complement(20663..21571)
                     /locus_tag="R8X70_000692"
     CDS             complement(20663..21571)
                     /locus_tag="R8X70_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928493.1"
                     /translation="MMLEIKNLSKNFGKIQALKNINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAQLEQASSCEFLKCKGEVAMMFQNYALFPHLNVEKNILFALYDKKDKKQILEDL
                     LKTFEIENLRYKKIDEISGGQAQRVAFARAVARGCKLLLLDEPFSNLDQNLKQDLRRE
                     LKKLIQKQKITAIMVTHDIEDAYCMSDKIAFLDKGEILAHANPKELYFKPNHKSARIL
                     PDLNIIEEELDLEDEFFQWIASKNYTFGYAELKIGNRFEATILQKEFLGAFYRLKVRY
                     KNIDFFMLLSSNYTLKEKINFDIINF"
     gene            complement(21555..23171)
                     /locus_tag="R8X70_000693"
     CDS             complement(21555..23171)
                     /locus_tag="R8X70_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEF2928494.1"
                     /translation="MLKTLKYYKIGAILLALFLTLPIFGIFAELFYILFQNFNTSNLA
                     EISSIKENLSHFFDYLFLKFIKDTLIVSIGVLLLSLILGVSSAYLMANYNFYFCRILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHEVFGFRIDFFNHYGVIFVLGISLYPYIYL
                     FAKTAFKSEAIEAYEVAKIMKYSEFRIFTRVALLSARPAIFSGALLVLMETLSDYGAS
                     AYLGVDTFSAGIFKLWYDLNDSYSSSILSGILMIFVFLIMYIDYYYKNKHHYSFNQNL
                     TLFIKKRKLSHIKQILACFYCFIIALLGFILPFIWLVYWGLKDFKLFEAEFYIISFQT
                     IILAFITALITTLLAYFLMFSSRIIKNNFFSLCILKLSSLGYSIPAAALGISMIVLFV
                     FLDKIFHLNLLGTSLIILVFAYIIRFLASAIYSLEGGYNKIHLNTDEASLNLRPSYLI
                     LFFKIHTPLMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLLIVLLSLIVVIWMDKITRKDDVRN"
     gene            complement(23171..24175)
                     /locus_tag="R8X70_000694"
     CDS             complement(23171..24175)
                     /locus_tag="R8X70_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009881850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HEF2928495.1"
                     /translation="MKKIFSLCLLGFSLLGAAELNIYSARHYDADFQIIKKFEEKTGI
                     KVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNSGLLSPVKSKYLEDTIP
                     AHLRDKDGEWFAITKRARIIAYNKNANTDISKMKNYEDLAKPEFKGQIVMRSATAPYS
                     KTLLASIIANDGDENAKVWAKGVLDNLATKPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQEAAKKFMEFMLTP
                     EIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSQIAEKVKEAVKIYDQVGFR
                     "
BASE COUNT         8329 a         4069 c         3384 g         8511 t
ORIGIN      
        1 ttattggttc aatctatcaa tgatatggca gaatctatta aagagcaaac tgcaggtatt
       61 actcaaatca atgagagtgt agctcaaatt gatcaaacca ctaaggataa tgtagagatt
      121 gctaatgaat cagctattat ttctaatact gtaagtgata tagctaataa catacttgaa
      181 gatgtgaaaa agaaaaggtt ttgattaaac taatatgaaa tattgatttt acatattagt
      241 ttatatgttg gctaatatat acaatttaga ttgatatgca agtatcaatc taaagatttt
      301 aattcattga tacttttaac ttattattta ctaacacttt taattgctta ttcattaata
      361 tctttaattc gttattcacc aatacctaga taggttgggt gttgatgaaa tttatttaca
      421 aattcttctt atatatttct tatcttactt atttgaaagt ttctaaaaag tttccaaaca
      481 tttctatact ttcattgttt taatttcaat acggagtaga aaacaaatgc aaagaagagt
      541 atttttaaaa ggttcagctt taggttctat ggtggctttt tttggaggtt caaatttaag
      601 tgctgcgata cttaaggata aagagttgtt aggttttaaa gctgtaagtg caagtacaaa
      661 agatgaagtc atagtgcctg agggctacga ggctaaagtt ttgatatcgt ggggagatcc
      721 actttttagc aaagcaaaag cctatgatga aagtaaaaat atcgatatga atgcagtgaa
      781 taatactcgc tttgtttttg gagataataa tgatggtatg agtttttttt cactttcaaa
      841 aaatagagga attttagcca taaataatga atacattaat cctgaaatca tgtttaatca
      901 tcagggtaaa aatttaagca aagaagatgt tttatatgag caagccagtg tgggtgtaag
      961 tgtattagaa attcaaaaaa agggtaatga atgggctgta gttttggatt ctaaatacaa
     1021 tcgtagaatt gatgcaaata ctaaaatgga agtaagcgga gcagctaaaa aagaagtttt
     1081 aaaagataaa aaatttgctt atggaacttt tgcaaactgt gcaaatggtc aaactccttg
     1141 gggaacttat attagctgtg aagaaaattt tgatgattat tttggaagtt ctgatgaaaa
     1201 tttaaaattt gatgaaaatt ttaagcgata tggctttaaa acaaaaagcg aatacggctg
     1261 ggaaaaattt gacgaaagat ttgatctagc taaaaattta gatgaagcaa atcgttttgg
     1321 ttggatagta gaaatcaatc cttttgatgc aaaaagcact ccaattaaaa gaacagcctt
     1381 aggtcgcttt aaacatgaaa acgcagaatt tatagtagaa aaagatggtt tggttatcgt
     1441 ttatatgggc gatgatgaaa tcgatgagtt tatttataaa tttgttagca agcacaaata
     1501 tgtaaaaggt ggagatacaa gtaaaatttt agatgaagga actttgtatg taggccaatt
     1561 taatggcaat gtaggggatt ttagaggcag tggaaaatgg atagctttag agtatggtaa
     1621 aaacggctta gatgaaagta aaggatttaa atcacaagct gatatactta tcaatacccg
     1681 ccttgctgca agtgtagtgg gtgcaactcc tatggataga tgcgagtgga tagcaagcca
     1741 taaagaaagt ggctctaggg aagtttttgc tactttaacc aataacaaaa accgtacaca
     1801 agctaatgca gctaatccta gaacaaaaaa tctttatggg caaattttaa aatggatacc
     1861 aaaaaattca cacaaggatg atgaatttac ttgggaaatt tttactcttg tgggcaatcc
     1921 tgataatcaa aaaggtttaa acaaagggtc aaataatatc actagtgaaa ataaatttaa
     1981 ttctcctgat ggacttaaat ttgatagaga tggaagactt tggatacaaa cagatggttc
     2041 ttattctaat aaaggcgaat atgcgggaat gggaaataat tgtatgctag cggccaatcc
     2101 aaaaacaggt gaaatcaaac gctttttaac agggctatag cttgtgagat aacaggaatt
     2161 gcttttgatg aggattatac tactatgttt gtaggtatac aacatccagg agaaggactt
     2221 aagggtagta cttttcctta tggaaaaaca ccaagatcaa gtatagtaat gataagaaaa
     2281 cttgatggtg gagttatagg agcttaatta aagatctaaa gaacttataa taatatctct
     2341 tttatcccaa agattaaata agatcaaaat tataagttct tctttattta gattgtttta
     2401 agtcttaaaa aatctaggac aaattcctag attaatgcaa gctttctata taagccatag
     2461 cactaagcgc tgctacggct ccatcgcctg cggcacaaat aacttgtttt ggagcatctt
     2521 ttctaagatc tcctgctgca aaaagcccag gaacattagt ttgcatttta agattgacac
     2581 ttacttgccc gccttcttcc atattgcata aaaacttacc atcgtcttgt tttaaaattt
     2641 catttcttac attaagtccc acaaaggtga aaattcctgg cacatttaaa tctctaatgc
     2701 taccatcttt taattttact ttcacgcctg taacacccat tttatcacca tatacttcat
     2761 ctatgcttgc actagtgata agttcgattt tttcattttt cttcactttt tctactgtag
     2821 aaggcgcagc tctaaattcg tccctacggt ggattagata aactttggag caaatattgg
     2881 ctagatataa tgcttcttct aaagcagtat caccaccacc taaaaccgct acttctttat
     2941 ttttatagaa aaaaccatca caagttgcac aagtgcttac acccttgcca aaaaattcat
     3001 cctcaccttt aaaacctgct ctttttggag cagaaccagt gcaaactatc actgcttttg
     3061 caagttctgt tttaccgccc tctagtctaa tggtaaaact tccatcttca ttttttgaaa
     3121 tttgttctac acctaccatt tcatgcttta agccaaaacg catacattgc tcactccaag
     3181 gtgccataaa agaaattcca tccataactt gtgcaacacc tggataattt tcaatttccg
     3241 aactagaagt aatttgccct cctggcatcc ctttttcaaa cattactaca tttttaagac
     3301 cacctctagt tgtgtaaagt ccagcactaa gtccagcagg acctccacct ataattgcta
     3361 catctaacat tctttttcct ttgtaatttg aattttatta ataatgatat acaaattatt
     3421 cttaatagta gttaataaaa attattattt agtataaatt tgaaattttt gaataaaagg
     3481 ctagtaaaac tagccttgaa gatttttata gtaaagaatt taatttatcg ctgattgctt
     3541 gttttgattg agcaccaact aattgatcta ccacttcacc atttttaaag aagataagag
     3601 tagggataga gcgaacgcca aattcagctg ctaaatcgcc ttgctcatct gtatttactt
     3661 tacaaatttt tgctttaccg tcaaagtcat tcgcaagttc atcaattact ggagcaagca
     3721 ttctgcaagg tccacaccat ggagcccaaa aatcaactaa agcaacacct tcttttgctt
     3781 gtgcaaaatt atcacttgtt aattcgatat attttcccat aatttttcct ttcactaatt
     3841 tttgtaattg tattttattt ttttaaatat tagcttaaaa actgatattt tcaaaaaatt
     3901 gtatcatatc atcactaata cagataagat ccatttgaaa atcatctaaa atcccatgtt
     3961 ttaattcata aaattctata gtttttaaaa ttttttcata ttttttaaca tttaagcgtt
     4021 cagaaacttc ataattattt tgagtaaatt taacctcgat aaaatgtaaa attccatctt
     4081 ttttcgcaat gatatcaatc tcgccaaatt ttgaacgaaa attacgcttt aaaatttcaa
     4141 atttttgttt ttttaaaaat tcgcaagcct tatcttcgcc taaaattcca ctaagatatg
     4201 atgcaaatcc cattattctt ctatgcgcat cataaaaggc ttagccttga taaaatcttg
     4261 tttttccaag atagaaagta aattttgaat acttttttca aaggtatgat gagtggtaaa
     4321 aaataaagtg ctgtaagttt caccctgttt tggtttttgc aaaaagctgt ctatcgaaat
     4381 attattttcg ctcataaatt gagtaatttt agataaaact cctgttttat cttctacttt
     4441 taatcttaaa taatattttg tataaatttc atctctattt aaaagtttaa aatttaaatt
     4501 attttcaaag cccatcatag gacccttggg ttcatttctt gctatatcca taagatcagc
     4561 gataacagca cttgctgtag catttcctcc tgcacctgct ccataataaa gactttcgcc
     4621 aagtatatca ctgactatgc taatagcatt catcacccca tcgacttttg ctatcatttt
     4681 atctttactg atcatagtag gatgcactct taattctact atggaatttt gggctttagc
     4741 tatgcctaaa agcttgatag taaagtcaaa ttcttttgca aaatacatat cttcagcaga
     4801 aattttactg ataccttcga ttaaaatatc ttcaggttta gcgcgtaaac cataagcaat
     4861 gcttgctaaa atcaaaagct tgtgcgcagc atcttgccct tctatatcaa aggtcggatc
     4921 tgcttctgca taaccaagtt cttgcgcttt ttttagcaca tcatcaaaat ttaaaccctt
     4981 gctattcata gcgcttaaaa tataattgct cgtgccattg agtatacctt caatactcaa
     5041 gatattattt gcgcttagtc cttcttttaa agctttgata ataggaattc cgcccgcaac
     5101 acttgcttca tagccaaaag ttgtattttt agctaactct tcaagctcat agcgatgata
     5161 agcaagcata gctttgtttg cagtgactac aggcttattt tttttaagaa tttcactgat
     5221 aattttaaaa ggtgtttcaa ccccacccat taattccaca aaaacatcta tatcatctcg
     5281 ttgcaaaatt tcatctacat ttgtaacgat aggaatcagg gtattttctt tttggctttt
     5341 agcaagagca acaacaggaa tgatatcttg tccgcatctt gcacgaatga tttctttatt
     5401 ttgaattaaa acacgagcaa cagcactccc tataacccca tatcctaaaa tagcaacctt
     5461 cattttattc ttctttcaag tattttttaa tattgcgtgc agcttgacga atgcggtttt
     5521 cattttctat taaagcaatt cttacatact catctccagc ttcaccaaaa ccaatacctg
     5581 gactcacagc tacttctgcg tgctgcaaaa gttgtttaga aaattccaag ctttttaaat
     5641 acattttact ttcaggcagt tttgcccaaa caaacatact agctcttggt ttgtgaagtt
     5701 tccaacccgc attttcaaat gcttctagca agatatgcat tcttttatca taagtagcac
     5761 gaatttcatc tacacaactt tgatccccat ctaaagctat agtagcagct acttgtatag
     5821 gagtatacat accataatca aaccatgatt ttatcttttt aagagcagct actaagcgtt
     5881 tatttccaac tgtaaatccc acacgccaac ctgccatatt gtaagatttt gaaagagtgt
     5941 aggtttctac agcaacatct tttgcgccct ctacttctaa aatagaaggg gttttataat
     6001 catcataagt taaatccgca taagcgatat cagaaataat ataaaatcgc tctttttttg
     6061 cagttgcaac caatctttca taaaaacttt tttcacaagt taccgttgtt ggattgtgtg
     6121 gaaaattaac cactacatat tttggacgcg gaatgctttc atgcagggtt ttatccaaat
     6181 cttcaaagaa tttgttttca tcaagctcaa atttttcatt atatttaaga ggcattttag
     6241 ctacatttcc tcctgctatg ataaaagctt gagtatggat aggataagct ggagctggca
     6301 ctatagccac atctcctgga ttgataatcg ctcttgctaa attgacaaaa ccctctttag
     6361 agcccatagt cgctactact tcactttcag gatctaaatt tactccgtat tttcttttat
     6421 accaattgca aatagctagg cgaagtttat aaatccccat agaggtagaa taccccgaag
     6481 ttttgtcttt attggcgctt tcacaaagtt tatcaatgat atgttgaggg gttttaccat
     6541 cgggatttcc catagaaaaa tcgatgatat cctttccagc acgccttgct gccattttga
     6601 tcgcatttac ttctgcaaaa acataatttg gaagcctttc tatggtattg aaacgaattt
     6661 catcaaacat ttctcttcct ttttattttt ttagggtgat ttttaaacct cttcggatat
     6721 tgtctaaact atacatatca cttacaattg cataaactgc accgcttgga ataagctctg
     6781 aaaaatgatt attttgagct tgactcttga ctgctttaat aagatttaaa tttttatcta
     6841 aaaataacac tttaggaaac caaaaatcag catcatgagc atcaatcatc aaatttgaag
     6901 ccccttgaag agtaaataca taatctttaa gcggtctttc taaagcttgt gtggaattaa
     6961 gttttaaatc aatattagta ttaagctgag cattttcaaa atttaaatca tactcatagt
     7021 cataagtacc tatgcgcttg atattgtcta tataaactga attatctttt aaaagagcgt
     7081 ataaggcacc tggatctaaa atgtattgag attctacttg tatggtatag tctatattgc
     7141 catcgcgtaa aatcatatcc gtaggaataa aatatatata tccaagattt gtaagtgcgt
     7201 cagttaaaat cttaaaaaat acaacagaat ctgctttagc tttaaaatta agctttaaag
     7261 ttcgaggctc tggtagagtt aggttgatta aagaattggt ttttaaaatt cttgaaattt
     7321 tagctatgtc tggattgcct ttattatcca tatagctgga gctaggaaac aaaagacgca
     7381 attgagaatc tttagaagga ttagcaacta aatttttcac tagctctaaa ctagaaacag
     7441 caaaaacaga attagctaaa aataaaaaaa taaagatttt ttttaccatt ctttaccttt
     7501 atttaacttc ataaattcag ccgccgaaat acttgtaatt tttccatctt taatcaaaaa
     7561 gcgctttgaa tttcctgcag gaaatttttg ttcttttcca ttttcatcaa aaacacttaa
     7621 agccgcagct cctgttaaaa ccaaacgatt tacttctaaa gaaagattaa aatcattttc
     7681 ttttacaaga ctagtttttc tataatttga taaatcaatc aaacctatcc aaattttacc
     7741 cgaagcttta aaatgagctt ctttattgag agcttttgag acttctgcaa cttcttgatt
     7801 tgttgttgct aaagaatcat ttgtgcttaa attttcttca ttggcatttg tattatttgg
     7861 tgtggtagaa atttgtttta tttcttcttt tgtattgtta agttctgtat tttgtatttg
     7921 agttaaattg gcttctgttt cattttcttc agcttgattg tcaatcacaa ctacattatt
     7981 ttctaaagct tttagattag attgtgcttt tccgataata tctacaacgg ccgcacttga
     8041 gttgttttga tccttttgaa aaaaagattt aatataatca aaataataaa tcccaaaacc
     8101 tataagtgct ataattataa ctataattat aaaagataca aaactagttg acttttggct
     8161 ataagcatct aatttagggg ttatcatctt aggcttggtg gttgtatcgt taagattatt
     8221 ttcattgaga taggtttcaa attcttcatt aaaatccgta aaatcaagtt cgtattcacg
     8281 acttaaaatt tttacgaaac cacggacatt aaaacgattt aaggtggcaa aatccttttt
     8341 aactaaagct tctaaaaatt ccaattcgat ttttgttcta gcagcaactt cttttaaatt
     8401 taaatcttca atttttttcc aattaagcat ttatcatcct atcacaaagt attgcaaaag
     8461 ctacactgac attaaggctg tcgaaattat ttttcatttc tatgcctaca cattcatcgc
     8521 atttttttat tattttagca cttaatccca aaccttcact tcctaaaatc aaagcttttt
     8581 tacccttatc gactttataa tgatgaattt gtttacctcc acttgcacta gcaaaaagct
     8641 taaatcctac ttgtttaagc tcatttaaaa cggtaaaaat atcattattt aaagcaattt
     8701 caagatctag cgccgctcca ctgctcgtgc ggataacgcc ttccatcgcg agtctttcgc
     8761 cgataaaaat aagtccatcc actcctaaag cataagctgt tcttacgata gctcctatat
     8821 ttccaacatc actgatacca taaagaatag ctataaattc acccttttta agagtgtgca
     8881 aatctttaaa ttcatactct ttaatatcta gtaaaaaacc ttgatgattt ccacctttag
     8941 cataagcttg ggctgtttta aaatcaagtt ttttgatctt aaagcctgaa ctagcaattt
     9001 ttttaaaagt ttctttgtcg cactctttag ctaaataaag ctcatttata agctctttat
     9061 gtcgttctaa aatataaaaa aatatctgtt ttccataaac tatcattcta aattttacct
     9121 aactttgact taaaagcagt ttttgataaa tttcttttgg attttttcca ttcatctttg
     9181 ccaaaagctt gctttttgtt tttaaaggta tttcaagctc taaaatatca ttttcacaca
     9241 aggaatgact aatgttatct ttatcatttt tagccaacac aacaacccac tcacccttta
     9301 aatttacctg ttttaattca ttaaaaagat ctatagcctt gcctttaaat ttggcttcaa
     9361 attttttaga aatttcttta atcacaaaaa cttctctttg actatctaaa atagctattt
     9421 gttctattaa agacaaaatg cgtttaggag attcgtaaat aacactagga taaggatgat
     9481 tgagtatttt ttggatatct ttttggcgtt ctttgccttt attggctaaa aaacccataa
     9541 aaataaattc tttttcgcac aaagccgagc ttacaagtgc caccaaagct gcattagcac
     9601 cgggtaaaac ttcaaattgg atatcatttt ctaaagcaaa atcaattaaa aattgcccag
     9661 gatcactaat ccctggcata cccgcatcac tcaaaaaagc aatgtcttga ttaaaaaatt
     9721 ccaagtctaa attttctaaa actttttttt cattgtgggt gtgaaaagat ataaattttt
     9781 tatctccaaa atcgatttca aatttagaag aaagtaaaga aagtaaagac ttgcttaccc
     9841 ttgtatcttc acaaaaaaaa atatcgcaag tctttaaaag ctctaaagca cgaaaagaaa
     9901 tatcgcttaa atttcctatg ggtgtaggaa taaaataaag cataattatt gcattgcgta
     9961 ttttttctta aatttctcta cacgacctgc tgcatctacg attttttcgc tacctgtgaa
    10021 gaaaggatgg cagcttgaac aaatatcaac tcttaactca cttttgtttg atttagtaac
    10081 aaaagtattg ccacaagcgc agctaacttt gcattctaca tattctggat gaatttcttt
    10141 tttcatagct ttttccttaa aattaaaaca ataagcggtg attatattaa atttaatata
    10201 aaaaaaacat taatttaagt aaaattaaag caatattttt gcagccactg caatggcagc
    10261 actttgactt ctcaaaatat taggaacttt aaggcaaatt ttttctttaa acatttgttt
    10321 ttctttgggg ctaaatccac cctctggacc tataaaataa agtcgagttt tatcaaattc
    10381 ctttacctca ccttcaaaat caaccaaaac agcatcagga aaaaccttgc taaattcttg
    10441 tatattttta tagctttgaa tttgcatttt gtgacttctt ccgcactgct cacaagatga
    10501 aatgatgatt ttttctaatc tctcaaaatc aagtttaaaa tttctttgag aaaattcagt
    10561 aaaaacaagg tgtaattttt taactccaag ttcatttaaa aaaggaagtg ttttttccaa
    10621 aattttagta tcaataaccg ccaaggctaa atcaagttcg ctttgtggat gagacttaaa
    10681 atgcttatgt aaaaaataaa gcaaacaaga attacgatct aaatttgaaa ttttatattc
    10741 ataaataaaa tcatcctcta aatttcttaa agataaaatt tcattttctt taattcttct
    10801 tgctttcaag tgagcaaatt cttcgccctt aagttttaaa atttcttccc ctgcttgctt
    10861 gtggtataaa aattgcattt ataaatattt acctgttaaa aaaggtaaga ttaaaaggac
    10921 aagttcacaa aataaaatca taaaactaat gcgtctaaaa gttatatagc gtcttaatct
    10981 acgagctttt ttaaattgta taaaatgaaa aatagctaaa gcaaaaataa aaatccaaga
    11041 aaaaatcatg agccaaagat ttaaatgtgt ttgaaattgt ttaatcgcta aaagcaaaga
    11101 acctgtaaaa agcatcaagg ctaaaaaaac atagtatata ggtaaaaaca aacggattct
    11161 gcggataaat ataaattcgg ttttaaaatt tccttgagtc aagacaagat aaaaaaacat
    11221 taaaaatcca ctagcataaa gactataaag atgtagagct aaaaaaaatt cataactttt
    11281 atccatttat ttctccttgc tgatatattt tgctaaattt tctctttgtt cttgggttaa
    11341 gaaattatga gcttcatctt ttaaattttg aagtctttga ataaattttt cactgcttaa
    11401 atttttaatt gcaatacctt ttttggtttt aacttctcct ttttctccat gacaagtagc
    11461 gcatttttgt ttatataaag aattaataac acttggattt acatcatagt cttcgctgat
    11521 actggcctca tcatcaaccg gtaagggcaa attcgtatcg ctaaattcgg ttttttcatc
    11581 attttgttca atttgtacta tttcttcggt agtattttgg tttttgtgat taaattcttt
    11641 atcatcacta caagcgttta aaaataaaac tgcaaataag cttattaaaa tacttaagtt
    11701 tttacccatt aaacctcctt aggatttgta aaaatgtgta aatttttcaa cttatcataa
    11761 aattctatat cattccattc tgcttttata gcaggtgaaa attctatatc ttcaagtgtg
    11821 atttttggca tagtaggact ataagcatct tctttaaacc cttgtgcata gcctgttctt
    11881 gtttcatgta ctataatgct ttgcaaattt acaccttgtt cgccatttat catcttggtt
    11941 tgttttaata aagcatcgat taaaataaaa aatacacggc aaaaattttc agcactgaca
    12001 ttaacaggca agcttatcca gcgctgcgag tattttttca tttcatttaa ataagattca
    12061 tcatcttgat taaaaagtgt aatagcatga tcaaagctgt caataatttg acgcatatgg
    12121 gtttttaaaa gcccaaagtc ataaaccatt cccgcattat ctaaatactt gctttcaagt
    12181 aaaacctcaa ccttgtaaga atgtccatga atactacttt tacaacgact tgaagaacaa
    12241 aatctaacaa tatgagcatt ttcaaattca aataattttc ttataatcat acaccctctt
    12301 tatcattcca aagacgaata tggattctat cagaataatt ataaccattt ttaatacaaa
    12361 actcggctat ttttaaagca ttttgtttta aattttgctc attttctccc ataggcatac
    12421 aaaaaatttc attaggcgct ttttctaaaa tttctaaaat ttctagtgac aaactttcta
    12481 attgactgga atttaaaaca aatttgtaaa agctatcttt agcataatgc ttaaagcctt
    12541 taagggcatt gaaatttaat cttttttctt tacccatccc gctattttga agcttgacac
    12601 ttagagcaaa aacacattct ttataaaaag gatatttttc aaaatcaagc tctatgcttc
    12661 cattgctttc aaaatgcact tcaaaattat ttttcaataa agcttggata aaatcgataa
    12721 attctggatt ttcatgatgg attaagggtt ctcctccagt aatcaccaca ataggattaa
    12781 aatctttttt taaatcaagc acgcgtttaa aaagttcact tgcatttaaa atttcatatt
    12841 cttcattaaa ttctttagta aaaactgccc ttatagtatc gcaaccttta agagtttttc
    12901 catttttaat aagctttacc ccaaagcctg agcaattaaa attacatcct gcaaaacgca
    12961 taaaaatggc tagttttccg ctatatttgc cttctccttg tatacttaaa aaactttcaa
    13021 caagttgcaa atttaacctc cggtttgata aaaagcgcga gatgaagttt cgttatctac
    13081 cacactccat ctattttttt caggtttatt gcgtaatact tcttgtaaaa tgtttgcagc
    13141 agcgttaata tcaccttttc tcactgcttc tttaatgctt aaagcctcat caaaataaag
    13201 acaaggtata agtaaaccct cagcgcttaa gcgaatgcgg ttgcaagaat cacaaaattc
    13261 atggctatgt ggatctataa tcccaaattc ataaccatcc gcactataaa tactcacagg
    13321 ggctttttca gcttttttaa tgagttttac ttgatatttt tgacttagaa tttgtatgat
    13381 ttcatctctt tttagacctt gtaattttcc ataagcatgt atattttcca taaattcaat
    13441 aaagcgaatt tgaatgtttt tagattttgc aaattccaaa agaggtatca actcatcatc
    13501 atttaaaccc tttaacacaa cagtgtttag cttgactttt aaacctacgc ttaaggcctc
    13561 atcaatcccc gctaagacac tatctaaaac atctttttgc gcgagaattt ttgctttttt
    13621 gctttctagg gtatcaagag agatatttaa acgcttcagt ccagcatctt taagatcttt
    13681 agcaaaatct tttaataaaa aaccattcgt tgtaatggct aaatcaagat cttttttata
    13741 atcatttatc atttttataa acacacttaa atctttacgc agtaaaggct ctcctccagt
    13801 gatacgaatt ttttcgatcc cttcatcaat agccacttta acaaacaaga aaagctcttc
    13861 aaagctcagt aaattttctt taggttgatg attaaaagga atttttggca tacaataaag
    13921 acaacgaaaa ttacatcttt gggttactga tattctaaga taattaatct ttctgccaaa
    13981 ctgatcaata agcattgcct ctcctagtga ttatttgata agttgtttaa attttaaaac
    14041 aagctcaaca tttccagtgc ctatacgcaa atcttttgca atttgctcta tactttttcc
    14101 ctctttaaat aaatccacaa ttttttgctc ttcggtatca taatttggtg ttaattttgt
    14161 catactttgt gctttttgtt ccaaatttaa aatacgattt tgttgctcat tttgaaaatc
    14221 ttctataata tgctccatgg tttttaaagt tcttaaaacg ggggtaattt ttgcactgat
    14281 ttgtttttca agcgtgattt gaatttcttc tttcaataga gtaattttat agtcctcttc
    14341 ctcttgatcg ccctcatctt ttacgcctaa ttctttgcgt aaataatgaa gttcttttgt
    14401 aatatcttca accacgcctt ggagtttgtt tatttttgca ctactttctt tatctttgat
    14461 attcatataa gctaatattg caaccaaaag tacgatcata aaaactaaat aaaacacatc
    14521 attactcatt tttgtccttt ttatttctta tcatatctct ttgcaattga accacgaaag
    14581 catcaaaagc tattctatct tcgggtttta ttttgataat ttgagctaat tttttatttt
    14641 gagctttagc aaaaatggcc attttttgat tattaagatc aaatcttatg taatactctt
    14701 ttccttcttc taaaatctca tctaaaaaat ttaaatattc aaaatttaaa gattcaacca
    14761 cgcctttttg tttgagtact aaaagatctt tatttttatc caaagaatcc tcaagtctta
    14821 aaatatcttc ttttaagctc aaaagtaaat cgaaaatgat tttctcgccc tcatcaaaat
    14881 ccacacgcaa ggcgagtttt ttccattttg aaagttgaga aatggcacct aattttagat
    14941 attcttgtaa aaaatggtta ttttcaatat cacaacactc taaagaagct tcaaatcctg
    15001 ccttaaaaag acttatttcc atactaaatc aacccaaata aaaataaaaa atattatact
    15061 taaatatcca tttaaagtaa aaaacgcttt atcaatgtga gcaaaatttt tatgtacaat
    15121 tttatgttca aaagccaaaa taataccgct gataatcact ccaaataatg caatatttcc
    15181 aagcgctact ccccaaacct gccaaacaaa aagtagccaa aataataccg ctaatacatg
    15241 gcaaaaagcc gagataaata aagtcgcctt agagccaaat ttagcaggga tagaatgaag
    15301 tcctactttt ttatcatact ccatatcttg taaagagtaa agcaaatcaa atccagccgt
    15361 ccaaaaagtt acccctaagc ataaaatcac actataaatg tgaatttcac ccatgactat
    15421 cacactgcct gcaataggtg caagtcctaa acaaaatcct aaaactaaat gcgctaaaga
    15481 actaaagcgt ttaaaagcag aataaattgc caatacaaaa agcacaggaa aagaaagata
    15541 aaaagccaaa gtattgataa aataagaaca caatataaaa ataatcgcat taaggataat
    15601 aaaaatccaa acgcttttgc gtcctatttt tccactgaca ttagggcgat ttgcacagcg
    15661 aggattgtct ttatcgatat cttcatccat taaacgattg gtcgccatag caaaatttct
    15721 tgcacttaca gcacaaataa tacccaaaat caaagcctta aaaccaaacc aagcgctatc
    15781 attaacgagt tttgaagcca ctatcataga tgaaaataaa aagggcaagg caaaaataga
    15841 atgcttaaat accacaagtt ccaaaatatc tttaaattta ttccaaattg tgttcatgtt
    15901 tttcacttta aaatattttt tgctatgatt ttactaaaat tttcataaat tttaggataa
    15961 attatcacat gttttttcaa atcgcactta taggaaccac tgccagtgga aagacttata
    16021 tagcaaatgc cttagctaaa gaatttaatg cagtggtttt aagccttgat agtctttgtg
    16081 tttataaaga aatcaatata gccaatgcca agccatctaa agatgagctt gcaaatttaa
    16141 actattttgg agtaaattta ttaagtgttg atgagcattt taatgtagaa ttatttataa
    16201 gagaatacca aaaagcaaaa gaatttgctc ttataaatga tttgcctttg attatagtag
    16261 gtggaacagg tttttatcta aaaacgatga tagatggttt aagtcaaaaa attcaagata
    16321 cgactagcac tttaagtaat gatgaaattt atgctctttt attaaaaatt gatccggctt
    16381 ataaaataga aaaaaatgat acttatcgtc ttaaaaaatg gctaagtatt tatgaaagta
    16441 caaatgaaat tcctagtgat tttttaaaaa agacacaaaa agatggggtg cttaaggata
    16501 ttgaaattta tgagcttgta tgggatagag aaattctaag aaaacgcata gaagcaagaa
    16561 caaaagaaat gattgataat gggcttatag aagaagcaag aatgcttttt tcaaattttg
    16621 ataacaatct taaagcatta aattctatag ggcttaagga atgcaaagag tatttagaaa
    16681 atcaaatttc tttaaaagag cttgaaagtt tgattagtat acatacatca cagcttgcca
    16741 agcgtcaaag aacttttaat aaaaaattcc aaagcactcc tttggaattt tctaaagccc
    16801 tagagttact tagaaataaa tttttagcta aagaataaat gctcaactaa aatttttatc
    16861 cctaagatta tcaaaacagc tccccctaaa aattcagctt tgtttctaaa gcgagtgcca
    16921 aatttattgc ctaattctaa agcaatagca cataagataa aagtaataga gcctattaaa
    16981 aataatgcca aaaacaaatc aacatctaaa aaggcaaagc taactcctat agctaaggca
    17041 tcaacacttg tagctacagc taaggcaaac atgattttaa atccaaattg atttgaattg
    17101 gtgtcgcaat tttcattctc aaaagattct ttaatcattt ttagcccaat taaagaaagt
    17161 aaaacaaagg ctatccaatg atcaatactt gcaataaaag atgcaaaagt gatgcctata
    17221 gcatatccaa tagctggcat taaagcttga aaaccaccaa aataaactcc tgtaataata
    17281 tagtgtttta aattcaattt tttaacacta aatcccttgc ataaagatac agcaaaagca
    17341 tccatcgcta gtgcacagga taaaagaata agactataaa aatccatgac aactcctatg
    17401 aaagatgtaa aagttgagaa ttataataaa aatttcttaa ttaatttttt taatgaaatt
    17461 atgattaaaa atttatagca gtggattata tttaattaaa ctttaagaat aaaaaatata
    17521 taattcaact tcgtttttat ttttactcct tttaaaagtg gcccattcgt ctagcggtta
    17581 ggacatcgcc ctttcacggc ggtaacacga gttcgagtct cgtatgggtc accacttaaa
    17641 tcctttttta atatttccga aatcaatcat agatgttctt taggattttt gcttaatatt
    17701 tttattgttt ttcataaaaa tggatttata aacttataag aattttattt gtagaatttt
    17761 ttgttttatt agaatgatga ggattaataa acaaatgagc catgatacca attttttctt
    17821 gttatatttt aaagataaaa ttccaaagga ttctttaatt tttcttaagg aaagtttaga
    17881 aaaagcaagc gaagaacaaa aagaaaagct tttatttacc aaactgaaaa atcccctata
    17941 tggactttta tttgcttttt tgcttcctgg tttagataga atttataatg gcaatataat
    18001 tttaggtata cttaaaatca tatcagcaat acttgtttct ataggtttaa taatagcaga
    18061 agataaaaat gatgaaagcg ctatgttaat ttttataatt ttagttttca tgctaagtgt
    18121 ttgggtgatt ttggattatt ttttggtatg gaaagatatt tgtcaaaata atcttaaaaa
    18181 aatttttgaa gttttacaat gaaacaagat aaaacgatat tgctcatatt taaagataag
    18241 attcccgaag aaaggctatt tatcttagag gaagaattaa aaaaaagcca aaaagatcta
    18301 agtgctcttt atgctatctc tcttaaaaat cctttggttg gccttgtatt aagtataact
    18361 gtgggattat ttggggttga tagattttat aagggcgata tcttgttagc ttgtattaaa
    18421 ttagcttttt ttataatacc tttatttgct acttttgctg cttttatagc attgttatat
    18481 gagagccatt cgatttttat agattatttt gccatttttg ctttaatgtt tgttgttgct
    18541 agcatttgga agcttgtaga tatttatctt gtttttgtag gtattaaaaa agataatttt
    18601 cataaaattc ttaatttttt ctcttaaaaa atgtcttgga aatttaaaga aataattaaa
    18661 gactttctta gtctttttat ataattttta tgctacaata ttttgtcaaa ctactaaatt
    18721 aaaggagaaa ttatgtttga attaagaaaa ttaccttatg ataccaatgc ttttggtgat
    18781 tttttaagtg ctgaaacttt tagttatcat catggaaaac accacaatac ttatgtaaca
    18841 aatcttaata atcttatcaa agatactgaa tttgcaagta aagatcttgt aagcattatt
    18901 aaaagttcaa gtggtggagt atttaacaat gctgctcaag tttataatca tgatttttat
    18961 tttgattgca ttaaaccgat cacaggctgt ggctgtggtg gctcatgcca aagtatggat
    19021 gctaatttac aagcagcttt agaaaaagaa tttggttctt tagagaattt caaagctgaa
    19081 tttatcaaag gtgcgacagg ggtttttggt tcaggttggt tttggttagt ttataatact
    19141 aaaaatcaaa aattagaatt tgtgggtact tcaaatgcag ctacacctat cactgaagat
    19201 aaagttcctt tacttgttgt ggatgtttgg gagcatgctt attatgtaga tcatcgtaat
    19261 gcgcgtcctg cgtatttaga aaaattctat gctcatatta actgggaatt tgtagcaaaa
    19321 gcttatgaat gggctttaaa agaaggtatg ggatcagtta gcttttacgc aaacgaactt
    19381 catcctgtaa aataatacaa ggcatcttaa aagatgcctt tttactctcc taaacttgga
    19441 gtcatttcga taatcttcca tggaagtcct tgagaattaa gctcatccat aaaaggtttt
    19501 gcgtcaaatt cttccatatt aaacacacct tttccttgcc aaattccttt agcgattagt
    19561 tttgtaccta tcatcgcagg aactcctgta gtgtagctta ccgcttgtgc gccggtttct
    19621 ttataacatt cttcatgatt gcaaacatta taaatataaa cttgtctgtc tttgccatct
    19681 tttataccac ggattacaca acctatattg gtataacctt ttgtgcgagg acctaaactt
    19741 gcaggatcag gaagtagggt ttttaaaaat tctataggaa tgatttcttt accttgatgc
    19801 atcacaggtt ttatacctag cattccaaca ttttcaaggc atttcatatg agttaaataa
    19861 ctttgtccaa aagtcataaa aaagcgaatt ctcttcaaac ccttgatatt ttttaccaag
    19921 ctttcaagct cttcgtgata aagtaagtaa ctatctttta cgcctacttc aggataatcc
    19981 cattccattt ttatttccat cggttgtgtt tctatccact cgcctttttc ccagtagcgt
    20041 cccttagcag aaacttctct aagattgatt tcgggattaa aattagtcgc aaaagcatag
    20101 ccatgatcgc ctgcgttaca atctaaaata tctatataag aaatttcatc aaataaattt
    20161 tgctgcgcat aagcacaaaa aacatttgta acgccaggat caaacccact tcctaaaagt
    20221 cctaaaattc ctgcttcttt aaatttatca tttcttgccc attgttcttt atactcaaat
    20281 ttagctagat ctggatgctc atagtttgct gtatcaacat aatcaattcc tgcttttatg
    20341 caagcatcca tcaagcttaa atcctgataa ggcaaagcta cattaagcaa aatttgcgcc
    20401 cctgtttttt taataagctc tacaaccgca tcgctatcat ctgcatcaat ttgtgcggtt
    20461 tgaatttcta ctcctagacg ctctttgata aaactagcaa tttcatcgca tttgcttttg
    20521 gttctacttg ctagagtgat tttactaaag gtatctgaat tcattgcgca ttttacggta
    20581 gctacgcgac ttaccccgcc tgcgcctatg attaaaagat ttttcattgg tcgtgtcctt
    20641 aaagaaattt taggaatttt agctaaaaat tgataatatc aaaatttatt ttttctttta
    20701 gcgtgtaatt tgagctgagc aacataaaaa aatctatatt tttatatctt actttgagtc
    20761 tataaaaagc tcctaaaaat tctttttgca aaattgtagc ttcaaaacga tttcctattt
    20821 taagttctgc atagccaaaa gtataatttt ttgaagcaat ccactgaaaa aattcatctt
    20881 ctaaatcaag ctcttcttct atgatattta aatcaggtaa aattctagca cttttatgat
    20941 taggcttaaa ataaagctct ttaggatttg catgagctag aatttctcct ttatcaagaa
    21001 aggcgatttt atcagacata caataagcat cctcgatatc gtgagttacc ataatggctg
    21061 taattttttg tttttgtatg agttttttta gctctcttct taagtcttgt tttaaattct
    21121 gatctaaatt agaaaaaggt tcatctaaaa gcaaaagttt acagcctctt gctactgctc
    21181 tagcaaaagc cactctttgc gcttgtccgc ccgaaatttc atcaattttc ttatatctta
    21241 aattttcaat ttcaaaggtt tttaacaaat cctctaaaat ttgtttttta tcttttttat
    21301 catagagtgc aaaaagtata tttttttcaa catttaaatg gggaaataaa gcatagtttt
    21361 gaaacatcat cgccacttcg cccttgcatt ttaaaaattc acaagagctc gcttgttcta
    21421 gttgggcgat gattcttaaa agtgtacttt taccacttcc gctccctcct aaaatgctta
    21481 aaaattctcc ttctttaaca tgaagattga tattttttaa agcttgtatt ttgccaaaat
    21541 tttttgatag gtttttaatt tctaacatca tctttccttg tgattttatc catccaaata
    21601 acaactatta aagaaagtaa aacaatgagc agcgaaggca aagcagcatc ataaattctc
    21661 tcatcacttg caaaccaaaa agcttttaca cttagagttt caaaaccaaa aggagctaaa
    21721 attctactca aaggaagctc ttttatggta tcgataaaaa caatgataaa agccaaaaat
    21781 aaaaaatgtt tcattaaagg agtatgaatt ttaaaaaata aaatcaaata actcggcctt
    21841 aaatttaaac ttgcttcatc ggtgttaaga tggattttat tataaccccc ttctaaagaa
    21901 taaattgcac tcgctagaaa acgaataata taagcaaaaa ctaaaataat caatgaagtg
    21961 cctaataaat taagatgaaa aattttatct aaaaacacga aaaggacaat catgctaatt
    22021 cctaaggcag ccgcaggtat agaataaccc aaagaactta gcttaagaat acataggctg
    22081 aaaaagttat tttttatgat tcttgaacta aacattaaaa aataagccag taaagtcgta
    22141 atcaaagctg tgatgaaagc caatataatg gtttgaaaac taatgatata aaattctgct
    22201 tcaaaaagtt taaaatcttt tagcccccaa taaacaagcc atataaaagg caagataaat
    22261 cctaataaag cgatgataaa acaataaaaa caggctaaaa tttgctttat atgacttaat
    22321 ttcctttttt tgataaaaag agttaaattt tgattaaaac tataatgatg cttgttttta
    22381 taataataat ctatatacat gattaaaaaa acaaaaatca tcaaaattcc tgataaaata
    22441 ctcgatgaat aagaatcatt taaatcatac cagagtttaa aaattccagc cgaaaaagta
    22501 tctactccca aataagcact tgcaccataa tcactcaaag tttccattaa aaccaataaa
    22561 gctccagaaa aaatggcagg ccttgcgctc aaaagtgcca cgcgtgtaaa aattctaaat
    22621 tcagaatatt tcatgatttt agctacttca taagcttcta tggcttcgct tttaaaagca
    22681 gttttggcaa ataagtaaat ataaggatat aaagaaattc ctaagacaaa aataactcca
    22741 tagtggttga aaaaatctat cctaaaacca aaaacttcat gaaaaaagcc ctgaaaatcc
    22801 ataattccaa catatacaaa agctaaaata taagcaggta ttgccaaggg taaaatgagt
    22861 aatttttcta aaatcctaca aaagtaaaaa ttataatttg ccatcaaata agcactactt
    22921 acacctaaaa tcaagcttag taataacacc cctatactaa ctatcaaagt atctttgatg
    22981 aattttaaaa acaaataatc aaaaaaatga ctcaaatttt ctttaatgga tgaaatttca
    23041 gccaaattgc ttgtattgaa attttgaaaa agaatataaa aaagctcagc aaagatgcca
    23101 aaaataggta gagtaagaaa aagggcaagt aaaattgccc ctatcttgta atactttagg
    23161 gttttaagca ttatctaaaa ccgacttgat cataaatttt aacagcctct ttaacctttt
    23221 ctgctatttg actcacaggt atttgatctt ctttaaaagt tccaaaatct tttactgttt
    23281 ggcttaattc tacatcattt cttataggaa attcataatt gctatcagtg agaatttttt
    23341 ggatttctgg agttagcata aattccataa acttcttagc tgcttcttga tttttgcttg
    23401 attttgtcat agcaataccg ctgatattta tatgagttcc tctattgtct tgatttggaa
    23461 aaataatacc taaagaattt ccaacttcta catcttttgg atttttagaa ttttttaaaa
    23521 gtcctatata ataagtattc ataacagcaa atttagcctc acctgcaaaa acttgtctag
    23581 cttgatccct atctccaccc tttggcttgg ttgcaagatt gtcaagcaca cccttagccc
    23641 atactttagc attttcatct ccatcattag ctataataga agctaaaaga gttttgctat
    23701 aaggagctgt agcacttctc ataacgattt gtcctttaaa ttcaggctta gccaaatctt
    23761 catagttttt cattttgcta atgtcagtgt ttgcattttt attgtaagca ataattcttg
    23821 ctctttttgt aatcgcaaac cattccccat ctttatctct taaatgagcg ggtatagtat
    23881 cttctaaata ttttgattta acagggctta aaagtccaga attttttgct tctgtaagat
    23941 tggatatatc ggctgttata aaaatatcag caggcgaatt gcttccttca agcgaaagtc
    24001 ttttgatgag ttctgaagct ttagcttgag tatgattaac tttaatgcct gttttttcct
    24061 caaatttttt tataatctga aaatcagcat cataatgtct tgccgagtaa atgttaagtt
    24121 ctgcagcacc tagtaaagaa aaacctaata aacataaaga aaagattttt ttcatttatt
    24181 tgtccttata ttgagaatta tatttagttt tatcatgatc tttaaaatca gcattagagt
    24241 gttcagagca cgcaaatgca aaacctaagc aaaataaaaa taaaactaat ttt
//
LOCUS       DAQUWA010000020        24251 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.020, whole genome shotgun sequence.
ACCESSION   DAQUWA010000020 DAQUWA010000000
VERSION     DAQUWA010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24251
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.020"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..469)
                     /locus_tag="R8X70_000695"
     CDS             complement(<1..469)
                     /locus_tag="R8X70_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
                     /protein_id="HEF2928496.1"
                     /translation="MITKDNLKQVLENLGFKNKNENYVKTINNYTLLIDYKNQSINYP
                     KEIKIHDKTTSNFSHPENFVVFECVHRLLEKGYKAEHLELEPKWNLGRDKKGGKADIL
                     VKDNENNPYLIIECKTTDSKNSEFIKEWNRMQEDGGQLFSYFQQEKGVKYLCLY"
     gene            complement(478..2685)
                     /locus_tag="R8X70_000696"
     CDS             complement(478..2685)
                     /locus_tag="R8X70_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HEF2928497.1"
                     /translation="MNEIKEELLLKLDLNTYLYEFKSCFARDKEIFLQGDSHLHFKRI
                     NELCETEFPNLPELSNLDKALVHLSKQGVLHLDEIFEFVKIFRYFEKIKKLNLGSNLN
                     SWLEKIEFVNGILDLCEKFDEKGELKESLDERLVNLNAALRLKNESIIAEFKKFCYTK
                     ALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIE
                     KIKNQKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVLC
                     DQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKHL
                     LPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDEI
                     ELGTDFEEAACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYDEELS
                     RPKYEFLKGTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELEL
                     KAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRTSLRNLEFKFHKAIEEAKKTIQLKD
                     IKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESDG
                     IKLRVSLKLLKKSTPTPKISPKTSISVTKPSNLSVSLDLHGLRSDEAIARLDKFISDA
                     LLAGFDEVLVYHGIGTGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVRL"
     gene            complement(2678..3028)
                     /locus_tag="R8X70_000697"
     CDS             complement(2678..3028)
                     /locus_tag="R8X70_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928498.1"
                     /translation="MSKFFLYLLIILILALITFALREKLGKKTKPFFGILLVIFIVLA
                     VFFEFENTQKSHLRTDIIVAFNQNKNILCKDINISKAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIRDCRLNDE"
     gene            complement(3021..4319)
                     /locus_tag="R8X70_000698"
     CDS             complement(3021..4319)
                     /locus_tag="R8X70_000698"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEF2928499.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITKELE
                     KEGVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKHAKELGIKCLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLLDDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHHAYTQFLDVAKIRVINAEDEFLKNYKNE
                     STKLYPSKDIKNCTMCIENFKPFTSFELKDLGEFKVFGMGYHLALDASLAILAALNFL
                     DIETIRTRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYAKLGRYK
                     KITAIFEPHRYTRLATNLKEFAKAFEGVDELVILPVYAAGEEPIELDLKAVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            complement(4498..4947)
                     /locus_tag="R8X70_000699"
     CDS             complement(4498..4947)
                     /locus_tag="R8X70_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928500.1"
                     /translation="MVFFTFLLGIYAFARAIYKMANIKRIYITKEKLVIEYYIKNDLV
                     FPLGTFFVYYRKISYSPSPGHIVIHTFGDKAKEYLEPGLFSDGDDPTKGCFERINAII
                     KPYVMPYLLGLSDEEFEKIFFHVNATSEIDTTFLKEAMELRKEKKDE"
     gene            complement(4939..5130)
                     /locus_tag="R8X70_000700"
                     /pseudo
     CDS             complement(4939..5130)
                     /locus_tag="R8X70_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795637.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5140..5364)
                     /locus_tag="R8X70_000701"
     CDS             complement(5140..5364)
                     /locus_tag="R8X70_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928501.1"
                     /translation="MQTKIEEQYSLESDNSTFDFQTDCEVKAGNQILHQVGDTQIVTK
                     KDCVIIKAGGVEVIIDSNGLVVKDGELKAE"
     gene            5777..6121
                     /locus_tag="R8X70_000702"
     CDS             5777..6121
                     /locus_tag="R8X70_000702"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928502.1"
                     /translation="MNPLKVFSNVNLGWLIRHYIFGIIILSFFYFALPTHDFYLFFTL
                     IINLIFFPFACFVWEELKNMLLGDNVFIVNAIFLLLSKIIIKLILFMLAIPIGIIGFL
                     ILWFIINKKQEL"
     gene            complement(6168..6944)
                     /locus_tag="R8X70_000703"
     CDS             complement(6168..6944)
                     /locus_tag="R8X70_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEF2928503.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDSGANLVVLGEYVLNSF
                     FTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGV
                     KSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIM
                     AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTNILRVNRIGTTKDEWSFYGDSMLI
                     NAFGEIESRLGSEEEMLIVEPKKADEARKIWAFDKIVKGF"
     gene            complement(6937..7110)
                     /gene="xseB"
                     /locus_tag="R8X70_000704"
     CDS             complement(6937..7110)
                     /gene="xseB"
                     /locus_tag="R8X70_000704"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEF2928504.1"
                     /translation="MSFEENLKNANESLEKLNDKELSLDESVKIYKEGLKSIEKARLA
                     LEKARLEVEQIDE"
     gene            complement(7107..8561)
                     /gene="guaB"
                     /locus_tag="R8X70_000705"
     CDS             complement(7107..8561)
                     /gene="guaB"
                     /locus_tag="R8X70_000705"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEF2928505.1"
                     /translation="MNIIKRALTFEDVLLRPCYSEVLPKQVKIHTKLTKNITLNMPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVGPK
                     ASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDLRFENDYSNLVENVMTKAPLITA
                     PKGCTLDDAEKIFSKNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDSFGRLRV
                     AAAIGVGQMDRVDALVEAGVDAVVLDSAHGHSKGIIDTVKSVKEKYPNLDLIAGNIAT
                     AAAAKALCEVGADAVKVGIGPGSICTTRIVSGVGVPQISAIDECAMEAKKYGVPVIAD
                     GGIKYSGDIAKALAAGASSIMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSIGAMQK
                     GSSDRYFQQGTAQDKLVPEGIEGRVPYVGSIKNVVHQLLGGLRSSMGYVGAKDIEDFQ
                     ARAEFVEITSAGLKESHVHDVTITHEAPNYKVNQ"
     gene            complement(8558..9925)
                     /gene="gatA"
                     /locus_tag="R8X70_000706"
     CDS             complement(8558..9925)
                     /gene="gatA"
                     /locus_tag="R8X70_000706"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEF2928506.1"
                     /translation="MITLKEALKYSKEELENLKKELNDKAKKENKIGAYIEQFLGKDL
                     SDGGEGIPIAIKDNISVKDWELTCASKILQGYVAPYDATAIKNLRSKGFSPYGRTNMD
                     EFAMGSSSATSFYGKTLNPLNFARVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSA
                     KVDFTPTAPNLNAEKKLRIAVIENYVNEASAEVKAALLKSIEMLKANGHEIVYKNMLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSQNTENLKDMYINTRSEGFGEEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDADLIFMPVTPTTAFEFNAKKSP
                     MEVYLEDIYTISLNLAGLGGISVPVGEDKEGLNISAQLICKAYDERTLLDGALSLEKI
                     IKENK"
     gene            complement(10037..12793)
                     /gene="ileS"
                     /locus_tag="R8X70_000707"
     CDS             complement(10037..12793)
                     /gene="ileS"
                     /locus_tag="R8X70_000707"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEF2928507.1"
                     /translation="MDYKDTLLLPNTTFAMRANLAEFEPKRFEKWFSKNYAYEKMKTK
                     RKEAKKAFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFNGESIRFTPGWDCHGLP
                     IEQQVEIKLGDKKKSLSKKEIRSFCREHANEFVNIQRDEFKSLGVIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYEDKEDYSIFVAFDLD
                     EQSCQKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLESMIAK
                     GLTKGEIQKELNAKEFEGLEAINPLNSRKSILIMGEHVLMEGGSGLVHTAPGHGEDDY
                     YACLKYDIEVIMPVDDGGCYDETLRHKGLLPSDLLDEFIGLHIFKANEKILELLGNHL
                     LYSSKFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLKGKTLRECAKEQILKTKFYPQ
                     SGVKRIGSMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDAELFDFVANIFEKHGA
                     DAWWEFEIKDLIPQNSKYNADNLEKVYDILDVWFDSGSTWNAVLNSGIYDAGEKRASM
                     YLEGSDQHRGWFQSSLLVGTAINEFAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSTDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLENLEV
                     EEFSFIDKWILTRATRVFKSAKENFLAYEFAKGFNVLLNFLSADLSGIYLDISKDRLY
                     CDAKNSKRRKSAQVAMALIARELLNLLAPNLTYSVDEALEHANSLIKGDAKDVFDLSL
                     EEKFEYDFNIDDEFLLSVREKFFENIDILKKDKVIKSTLELNLDTNSKLLNSIPKDEL
                     NDWFMVSFDENLQGEVLCEFEVENESFRIMKATLCKCPRCWKVESAKEDEPCMRCAEV
                     LKHA"
     gene            12884..13972
                     /locus_tag="R8X70_000708"
     CDS             12884..13972
                     /locus_tag="R8X70_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEF2928508.1"
                     /translation="MKHLLFLIGDELIMNENFKDYIYRSYENKFKEIHETRFQNKTDK
                     ELPFLLEKLLDKYDFITLFTTPNHYATIAKILATLSEDNLVLKEDNLVPDKAYFQKDS
                     FICDFINSKINVIKTNPGQKLPPLLGDIFPNFAYFCLLGIDDESAVLLLDTLTKSYEV
                     SIKSSKILENLTLIKASCVNFGKLDGFLTSVKNLFGQKVFLGKDPIQFIVSKLLEKKI
                     KISFAESCTGGLCASTLTKFSGVSEIFEGSIVSYSNKIKHEWLGISESILENQGEYSE
                     RCVYFMLKGIFKTAKPDFALAISGVTGEQDEGLVKSGTVYIGAMFKDGTFVQETLYLS
                     GDREFMQKQATLATFCLLLKLKPEIFEF"
     gene            13984..14408
                     /locus_tag="R8X70_000709"
                     /pseudo
     CDS             13984..14408
                     /locus_tag="R8X70_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344458.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            14473..15093
                     /locus_tag="R8X70_000710"
     CDS             14473..15093
                     /locus_tag="R8X70_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEF2928509.1"
                     /translation="MNFKELISKRRACKLFNDKKISEEDLHFILESGILAPSSHGFEP
                     WKFIILDKKEDNQKLAKLCFDQASVASASHNIILLARKDLQSKDEFAQKQIRRFAGSK
                     EENFQRILKIYTHDTDAMNEKELYHFAQLQCYLAMMQMSLAAMSLGIDSCMIGGYEKD
                     KVDDFLKLEYPFETAVILSLGYQAHEPKYPTQRLKFDEVVEFYKEK"
     gene            15093..15698
                     /locus_tag="R8X70_000711"
     CDS             15093..15698
                     /locus_tag="R8X70_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEF2928510.1"
                     /translation="MKTELEIFSTRYSCRNFKNEKLKKEDLDTILEIARLSPSSLGLE
                     PWRFLVVQDDNKKEELAQICNQQQHVKDCGALIIIVSRLDFLDYFEDKLRKRDMSEAE
                     IQKRLDTYMPFLQSLSQEQKISYAREQAHIALASILYSANALNIASCTIGGFDKEKLD
                     SYLSLDIQKERSSLVVALGYCNDKKNPQKNRFSFDEVVKFI"
     gene            15823..16359
                     /gene="pgsA"
                     /locus_tag="R8X70_000712"
     CDS             15823..16359
                     /gene="pgsA"
                     /locus_tag="R8X70_000712"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEF2928511.1"
                     /translation="MNLPNILAIFRMVLAPLLFFLLIHKFENIHQSWINYFAALTFSL
                     AALSDFFDGYIARTWKQTTKLGGILDPLADKMLVLAAFLGLLLTGKANEWVIYIILVR
                     EFFITGFRVVMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLY
                     SGFEYIYTYIKAQKKGEK"
     gene            16356..17462
                     /gene="rseP"
                     /locus_tag="R8X70_000713"
     CDS             16356..17462
                     /gene="rseP"
                     /locus_tag="R8X70_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEF2928512.1"
                     /translation="MRSLLLLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAA
                     RSLGVKVEVFSIGFGKSLIEREFKGTNYRLSALPLGGYVKLKGQDDMRPGFENLDKDS
                     YSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIAPNSAAQEIGLQ
                     KNDTILEINGVKIQSFDEISKHLSLEPLKILIDREGKNLEFTLTPKIGQGYNDFGQIV
                     EKPQLGVSPNGTSTLVKHQGLESFKYAIQESFQASTLIIKGIIKLISGEVEAKNLGGI
                     ITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNLYEMIFRRKV
                     PQRAFEYLSYAGMAILLSLMLFATYNDISRIAGE"
     gene            17455..18321
                     /locus_tag="R8X70_000714"
     CDS             17455..18321
                     /locus_tag="R8X70_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
                     /protein_id="HEF2928513.1"
                     /translation="MNKKFSYPIPNFTDRRKSIIFWRYLRFQARKILYFPQVRLLEKT
                     LNEEKNKHLKDFFSQRPYACYNAIRRFCDKSFKANERVKTLIYDVDKGLTCFKFLPEE
                     QMIFSFDEDFELFLGYNHNVYEEGFWAFSLKFKKYTISQCNFCFTLENNLLLSCIQGY
                     KYKDFNILEINKILTKKCHGLRPVALLIECSKMLCEILKLQATLGVHEKNQIRSQKGK
                     EKGYFVDYQKIWLENGGELIKIDKHKYYKLHHSQKNLEEIPSQKRSMYKKRFAMLEEI
                     KVNLDKTLDIQD"
     gene            18408..18785
                     /locus_tag="R8X70_000715"
     CDS             18408..18785
                     /locus_tag="R8X70_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEF2928514.1"
                     /translation="MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNGAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            18794..19342
                     /locus_tag="R8X70_000716"
     CDS             18794..19342
                     /locus_tag="R8X70_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEF2928515.1"
                     /translation="MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTTNGEKR
                     EETCFIDISFYGRTAEVANQYLSKGSKVLIEGRLRFEQWNDQNGQMRSKHSVQVENME
                     MLGNNPQQGGNFNNGGNNYGANNNYSNYENQSYDPYMSENNFKKAPQQAQTKTQNPNQ
                     NQEKIKEIDVDAYDSDDTDLPF"
     gene            19353..19613
                     /gene="rpsR"
                     /locus_tag="R8X70_000717"
     CDS             19353..19613
                     /gene="rpsR"
                     /locus_tag="R8X70_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEF2928516.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVVNNPFEGL"
     gene            complement(19669..22044)
                     /gene="lon"
                     /locus_tag="R8X70_000718"
     CDS             complement(19669..22044)
                     /gene="lon"
                     /locus_tag="R8X70_000718"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEF2928517.1"
                     /translation="MQIEEMQNYPSNLPILVEDELFLYPFMITPIFISDSANMKALDL
                     AIKNDSMLFVAPSKLENGRSFDEIYDCGVVGTIMRKVPLPDGRVKILFQGYAKARIIK
                     PLSSKPLEAKIELIKEEFLEGTKKEALLDVLKEKVRALANISHYFSPDLLRTIDEGLD
                     ASRICDLILNTVRIKKQEAYQFFILTDLEEKLLKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDNQKEDEVRDYYKKLESKKKFMHEDAYKEIKKQI
                     EKFERIHQDNSEASMIQTYIETALDVPFEKKAKKKLDIKEVAKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRGVADKDGAKVILCLYGPPGVGKTSLANSVAKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVVVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNLDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPNEKF
                     HITKKYLIPDELKKHGLKSSELDINDETIELIISEYTRESGVRNLRRKIAELCRKSAK
                     KLLLENIKKVSINVKNLNEFLDKKVFEIEKHDGENRIGQVNGLAWTSVGGDVLKVEAI
                     KIKGKGELTLTGSLGDVMKESARIAFSVIKVLIDEGKIKIPKKMILDPKTNVYDSYNL
                     HIHVPDGATPKDGPSAGITMSTAIASVFSDKKVRSDVAMTGEIDLAGNVLPIGGLKEK
                     LIAAYKADIKIALIPKKNYERDLKDIPDEVKDNMKIIGVKDFDEVLKYALV"
     gene            complement(22060..22707)
                     /gene="bamD"
                     /locus_tag="R8X70_000719"
     CDS             complement(22060..22707)
                     /gene="bamD"
                     /locus_tag="R8X70_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEF2928518.1"
                     /translation="MKKNFFLCILLGILFSACSTKNDEGLYNLSANEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHIADPLLETTQIILAQAHMDEEEYQLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDSFLNDYPYTEYEPLVQTMLTKFN
                     LAVFYLNDTIQDLYERTGHTQSAEIYQERLQESEFYQQSIIKPELPWYRSIFEKF"
     gene            22871..23260
                     /gene="fliW"
                     /locus_tag="R8X70_000720"
     CDS             22871..23260
                     /gene="fliW"
                     /locus_tag="R8X70_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HEF2928519.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLIN
                     PYLIRPDYEFEIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     SMVQVILDTVAYPNFFQADQIANYIKK"
     gene            23260..23997
                     /locus_tag="R8X70_000721"
     CDS             23260..23997
                     /locus_tag="R8X70_000721"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEF2928520.1"
                     /translation="MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEG
                     FKTLLYKDFNIENKNIILAFKPYALESVAANLKGKAKILISVLANTDFDKLKLIQAQN
                     YARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
                     APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAG
                     VTIKGIKVLEQKGIRGTFFEALNASAT"
     gene            23994..>24251
                     /locus_tag="R8X70_000722"
     CDS             23994..>24251
                     /locus_tag="R8X70_000722"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928521.1"
                     /translation="MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERL
                     YTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDNIFQFKK"
BASE COUNT         7994 a         4256 c         3417 g         8584 t
ORIGIN      
        1 cataaagaca aagatatttt acaccttttt cttgctgaaa ataagaaaaa agctgcccgc
       61 catcttcttg cattctattc cattctttta taaactcact atttttagaa tctgtggttt
      121 tacattctat aatcaaataa ggattgtttt cattatcctt tactaaaata tcagccttac
      181 cacctttttt atccctgcca agattccatt ttggctctaa ctctaaatgt tcagccttat
      241 aacctttttc taaaagtcta tgcacacatt caaaaactac aaaattttca gggtgtgaaa
      301 aattagaagt agttttatcg tgaattttta tttcttttgg gtaattaata ctttggtttt
      361 tataatctat taaaagtgtg taattattga ttgtttttac ataattttca tttttatttt
      421 taaagcctaa gttttctaga acttgtttta aattatcttt tgtaatcatt tatttcctta
      481 taatctcacc accttagcac caaagccacc ttgattgatc ggtgcgtcat taaagccctt
      541 gacactttta tgagttttca aaaactctct tacagcaaag gcaagctttc ctgttcctat
      601 accatggtaa actaaaactt catcaaagcc tgcaagcaaa gcatctgaaa taaatttatc
      661 aagtctagca atagcctcat cactcctaag tccatgcaaa tccaaactca cgcttagatt
      721 gctaggtttt gttacactaa tacttgtttt tggacttatt ttaggtgtag gagtactttt
      781 tttaagcagt tttaaagaca cacgaagttt gatcccatca ctttcaacca tagcatcgtt
      841 tttagaaatg cttatgattt tacccttaat tttttcatat tttacaaaat cccccacacg
      901 caattcttcg ttttgctcca tacttggcaa gatgatttct tttttaagtt cattggcttt
      961 attaagactt ctttgcttgt cttttatatc tttaagctgt atggtttttt tagcttcttc
     1021 tatggctttg tgaaatttaa attctaaatt tctcaaactc gtacgaaatt cttgttcatt
     1081 tttttctttt tgctctttta aggaaagtaa aatttcatcg actttttgct cttttttctc
     1141 gacattttca agcttagctt ttagttctaa ttcaagattg atatttttac ccacaagctc
     1201 ttctaaattt tctttatcct cgccataaag ctttttagcc tcgctaacta aattcggcgg
     1261 aatctgataa cgcaaagcgg tttcaaaggc ataagatttt cctatggtgc cttttaaaaa
     1321 ctcgtatttt gggcgtgaaa gctcttcatc atataaggca gcgatgagtt caacttgctc
     1381 attttttgct aaaagcatgg caaggcgttt gtggtgtgta gtaatgatga ttttaagatt
     1441 attagctatg agttttgaaa tcaacacact atataaacaa gccgcttctt caaaatctgt
     1501 tccaagctct atttcatcga tacctaaaag caaatttttc ttagaaaaaa gcctggaaaa
     1561 gtgcaacatt cttcctgcaa aagttgaaat gtcgttttta acattttgcg gatcttctat
     1621 gatggcatca aattctttaa aagtaccgat tttactttca cttgctttta tatgcatagg
     1681 caaaagatgt ttagctaaaa atgctgcgct tagcatggat tttaaaagca tggattttcc
     1741 gcctgcattt acccctgtga tgattaaaac ttgtttttta aattccaaac tcacgctttt
     1801 tggatttttt aaggcaggat gagcgaaatt tttaagcact aaatccgtac tttgatcaca
     1861 caaaacaaat tcaaaatccc tttttttagc aagcaaaacc ctagcactat aatgatcaaa
     1921 aagatcaaag gctgtattga taaattttaa aaaaggtaga ttttttgcta aaaaagctga
     1981 gaaattttta gcgtattcat aataaatttc ttctttttga tttttgattt tttctatatc
     2041 attttgcaaa ttttcaacac taagcggaac gatgtaaaat cctcccccac tacttctacc
     2101 tatgattttt gctttaatag catgattaaa cccacctctt acaagcaagg cttcgagatt
     2161 gtttataaga tggatttgtg tatcgataag ataaggcatt aaagcttttg tatagcaaaa
     2221 tttcttaaac tcagctatta tgctttcatt ttttaatctt agagcggcat taagatttac
     2281 aagtctttca tctaaacttt cttttaactc gcccttttca tcaaattttt cacaaagatc
     2341 taaaattcca ttgacaaatt caatcttttc aagccatgaa tttaaattgc tgcctaaatt
     2401 gagctttttg atcttttcaa aatagcgaaa aatttttaca aattcaaaaa tctcatctaa
     2461 atgcaaaact ccttgtttgc ttaaatgtac caaagcctta tccaaatttg aaagctcggg
     2521 caaatttgga aattcagtct cgcaaagctc attgatacgc ttaaaatgaa ggtgagaatc
     2581 cccctgtaaa aaaatttctt tatcccttgc aaaacaagac ttaaattcat acaaataagt
     2641 atttaaatca agttttaaaa gtaattcttc tttgatctca ttcatcgttt aacctacaat
     2701 ctctaatatc gataatcaac gaattaaagc tttgattatt atcctttgat ataaagcttc
     2761 ctgtcccaaa ttcgtaatta aaataagctt tagagatatt tatatcttta cataaaatat
     2821 ttttattttg attaaaagct acgataatat ctgttcttaa atgacttttt tgcgtgtttt
     2881 caaattcaaa aaataccgct aaaacaataa aaatcacaag caaaatacca aaaaaaggtt
     2941 tagttttttt gcctaatttt tcacgcaaag caaaagtgat taaggctaaa attaaaataa
     3001 ttaaaagata taaaaaaaac ttactcattt ttttgcctta atttattact gatatctcct
     3061 gcaccaaaac ctataataag cccttcttca aaaacttgcc ccttagaagc caccaaaaat
     3121 ttaccctctc ttttgatatc ttctacaaat aaagccttag gaaaaaccgc ttttaaatca
     3181 agttctatag gctcttctcc tgcagcataa acaggtaaaa ttacaagctc atcaacacct
     3241 tcaaaagcct ttgcaaattc ctttaaattt gtagccaaac gcgtgtagcg gtgaggttca
     3301 aaaatggctg taattttttt atatctacct aattttgcgt attcttgtgc tgcacttaaa
     3361 gtcgctttta tttcggtagg atgatgacca taatcatcga ttaaaaccaa attttcatca
     3421 gcatgtaaaa tatcaaaacg ctttttaata ccttgataat ttttaagcct agttcttatc
     3481 gtttctatat ctaagaaatt taaagccgcc aaaatcgcca aagacgcatc aagggctaaa
     3541 tgatatccca tgccaaaaac cttaaattca cctaaatctt tcaactcaaa gcttgtaaaa
     3601 ggtttgaaat tttctataca catggtgcag tttttgatat ctttgctcgg ataaagcttg
     3661 gttgactcat ttttataatt tttcaaaaac tcatcttcag cattaatcac gcgaatttta
     3721 gccacatcta aaaactgcgt ataagcatga tggagttttg aaacttcatt gccataatga
     3781 tctaaatgct ctgcttctgc attagtaact atagccaaat aaggatttga atttaaaaaa
     3841 gaactatcgc tctcatcagc ttcaaaaaca aggttttgac tttctttata aatcatattt
     3901 gaaccaaatt cttttaaaat cgctccgatg atcacagaag catcatcaag caaagaagcc
     3961 aaaatacttg aagttgtgct ttttccatgt gctcctgcaa ctgcaaaaac gcgcttatct
     4021 tctaagataa gaggtaaggc ctccttgcgt gaaaggcatt taatgcctaa ttctttagcg
     4081 tgtttaaatt caggattttc ttctttgata gcggcagaat aaataactaa atctttattt
     4141 aaaatattgt ctttatgatg agggatgctg accttaaccc cttctttttc tagttctttg
     4201 gtaattttgc tttctttaag atcactccca ctaatcttaa agcctttttc ttttaaaaat
     4261 cttgctaaag cggaaattcc tataccgcct ataccgataa aatggatatt ttgcattatc
     4321 taagcctttg tattgtaaag cttaaatttt aacacttttt tactaaaata aaaatataaa
     4381 aaagctctta aaactttata aaaaagcatt atttttaaaa atttatatat tctttattaa
     4441 ctcccaaatc atttcatttc taaaaaaatc aatttttcat ttccttgtgt attattttca
     4501 ttcatctttt ttctcttttc tgagttccat tgcttcttta aggaaagtgg tatcaatttc
     4561 actagtagcg tttacatgga aaaagatttt ttcaaattct tcatcactta agcctagcaa
     4621 ataaggcatt acatagggtt ttataatggc attaattctt tcaaaacaac cttttgttgg
     4681 atcatcgcca tcactgaata aaccaggttc aaggtattct ttggccttat ctccaaaggt
     4741 atgtatcact atatgtcctg gagaaggtga atatgaaatt ttacgataat acacaaaaaa
     4801 agttcctaaa ggaaaaacca aatcattttt aatataatac tcaatcacaa gtttttcttt
     4861 tgtgatataa attcttttaa tatttgccat tttatagatc gctcgtgcaa atgcatatat
     4921 gcctaaaaga aatgtaaaaa aaactataaa ccatttataa tctatttctt tgttaaataa
     4981 tctaggaaat aaataaagaa aaaaacataa aaatacaata tatgttatcc aataaagcaa
     5041 aaacgaaggt atatcctttt ttccttccca aatgatttca tcttgggtgt cttgttcttt
     5101 gatttctgtg ttgttattcg tttggctcat ttttatcctt tactctgctt taagctctcc
     5161 atctttaacc acaagtccat tagagtctat aatcacttct actccgcctg ctttaataat
     5221 aacacaatct ttcttagtaa caatttgagt atcgcctact tgatggagga tttgattgcc
     5281 tgcttttact tcacaatctg tttgaaagtc aaaagttgaa ttgtctgatt ctaaagaata
     5341 ttgctcttct atctttgttt gcatggaatt agactttaaa gatgtgttat cttgtatatg
     5401 ggcggataaa ttttgatgaa cattaaggaa aaattctttt tctattgttt gggttaaaga
     5461 cttttctatt aataatttat tttctccctt cacattcctt atctcatctt tatggataat
     5521 agtattttga ttagcaccta tttctatgtc tttgttttct cctacaaact catgagagtt
     5581 tttagctatt cttactttat tatctactcc tacatttaaa gtattgctta atcctactaa
     5641 tttttcaaaa gcggaaattc ctataccacc taaccgataa aatggatatt tttcattatt
     5701 taagcccata ttaaaaaaag ttatttataa taaaaaattt aaattataaa taagcaataa
     5761 atataaggag tattttatga atccattaaa ggtttttagt aatgtaaatt taggttggct
     5821 tataaggcac tacatctttg gaattattat tttatcattc ttttattttg ccttgcccac
     5881 acatgacttt tatttatttt ttactttaat aattaaccta atattctttc cttttgcatg
     5941 ttttgtatgg gaagaactaa aaaatatgct attaggtgat aatgtattta ttgttaatgc
     6001 tatattttta cttttaagta aaataattat taaattaatt ttatttatgc ttgctatacc
     6061 tattggaatt attggatttt taattctttg gtttataatc aacaaaaaac aagaattatg
     6121 aaattcacac taagcttatt taaataagct tagtgtgaat tcaatcttta aaacccttta
     6181 actatcttat caaaagccca aatttttcta gcttcatctg cttttttagg ttctacgata
     6241 agcatttctt cttcagagcc cagtctgctt tctatctctc caaaagcatt gataagcata
     6301 ctatcgccat aaaagctcca ttcatctttt gtagtgccta tgcgatttac ccttaagata
     6361 tttgtagaat ttaaaaaagc tcttgttttc aaaagctctt cccatctttg tttgctttca
     6421 aaggtgcaag cactaggaac gataactaaa tcaatctttt tagccataat ttgttgccaa
     6481 aaaatatcaa aatgtgtctc aaaaccaaaa agcaaagcac attttaattt ttcataatta
     6541 aaagtaaaaa tttttaattc tgatggagtt ttgttgctga aaaatttttc ttcattccaa
     6601 tgttcataag gcattaaaat ttgctgttca taacttttaa caccatttgg agtaactttt
     6661 aagcagagtt ttttataact tttagcttca acgctaacat aaggagcgat gatttctaat
     6721 tcgtattttt tagcaagttt aatcaagctt tcttttttag cttcgctttg ttcttttatc
     6781 atattttttg gcatgtgtaa aagttctgta aaaaaactat taagcacata ttcgcccaaa
     6841 acgactaaat ttgctccact atccttagaa gcttttagat aataatcaag ccttgattcg
     6901 ctcaatgcta aagtcggaaa ctgcaaagct gctattttac tcatcgattt gctccacttc
     6961 aagccttgct ttttcaagag caagccttgc tttttcaatg ctttttaatc cttctttata
     7021 aattttcaca ctttcatcta agcttagttc tttatcattg agcttttcta aggattcgtt
     7081 tgcatttttt aagttttctt caaaactcat tgatttacct tataatttgg cgcttcatga
     7141 gttatcgtta catcgtgaac atggctttct ttaagtcccg cacttgtgat ttcaacaaat
     7201 tcagctcttg cttgaaaatc ttctatatct ttagcaccca cataacccat agaagagcga
     7261 agtcctccta aaagctgatg cacgacattt tttatacttc ctacataagg tacgcgtcct
     7321 tctataccct caggaactaa tttatcttgt gcagttcctt gctgaaaata tctatctgaa
     7381 cttccttttt gcatagcccc tatcgatccc atgccacggt aggatttgta ttgtcttcct
     7441 tgataggtaa agagctcacc tggactctca tcagtacctg ccaaaagaga acctatcatg
     7501 atcgaactcg cacccgctgc caaagccttt gcaatatcac ctgaatactt aatccctcca
     7561 tcagcgatca caggaacacc atatttttta gcctccatag cacattcatc aatggctgaa
     7621 atttgtggca cacctactcc tgaaacgata cgcgtagtac aaatacttcc tgggccaata
     7681 cccactttaa cagcatcagc gcctacttca caaagtgctt ttgcagcagc tgcggtagcg
     7741 atattgcccg cgattaaatc taaatttgga tatttttctt taacgctttt tactgtatca
     7801 atgatacctt tagaatgccc atgcgctgaa tcaagaacta cagcatctac tccagcttct
     7861 accaaagcat ctactcgatc catttgccct actccaatcg cagccgctac gcgcaatctt
     7921 ccaaaactat ctttatttgc atctggatat tctttgcgtt ttttaagatc ttttatggtg
     7981 ataagtcctt ctaagcgtcc ttgctcatca actataggaa gtttttctac tttatttttg
     8041 ctaaaaattt tctctgcatc atctaaagtg caccctttag gagctgtgat caaaggagcc
     8101 ttagtcatta cattttcaac caaatttgaa taatcatttt caaatctcaa atcgcgatta
     8161 gtaagaatgc ctatgagctt tctatcgcta tctatcacag gaactcctga aattctatac
     8221 tctgccatga tttccaaagc ctctgctaca cttgctttag gacctacaaa aataggatct
     8281 atgatcaccc cgctttcact ttttttcact cttttaactt ctctcacctg agaagctata
     8341 tccatatttt tatgaattac accaagtccg ccaagtcttg ccatcatgat agcagcccta
     8401 tgctctgtca ctgtatccat agcagcagag attaaaggca tgtttaaagt gatgttttta
     8461 gtaagtttgg tatgaatttt tacctgctta ggtaaaacct cggaatagca agggcgtaaa
     8521 agtacatcct caaaagtcaa agcgcgctta attatattca tttattttcc tttataattt
     8581 tttctaaact taaagctcca tctagcaagg ttcgctcatc ataagccttg caaataagct
     8641 gggctgagat attaagccct tctttatcct cgcccacagg tacactaata cccccaagtc
     8701 ctgctaaatt taaagaaata gtataaatat cttctaaata gacttccata gggcttttct
     8761 tcgcattaaa ttcaaatgca gttgtaggag ttacaggcat aaaaataaga tcagcatctt
     8821 gtaatatttc ttcatatttt gccttgataa aagccctagc tttttgtgct tttatataat
     8881 aagcatcata ataaccactg cttaaaacaa aggttcctag taaaattctt ctttttacct
     8941 cttcaccaaa accttcgcta cgagtattaa tatacatatc tttaagattt tctgtatttt
     9001 gcgagcgttt tccataacgc accccatcat aacgacttaa atttgcactc gcttcagctg
     9061 ttgcgatgat ataatacgct gcgatatcaa acttagaatc aagcatattt ttataaacaa
     9121 tttcatgtcc atttgctttt aacatctcta tactttttaa aagcgcggct tttacttcag
     9181 cgcttgcttc attgacataa ttttctatca cagcaattct caattttttc tctgcattta
     9241 aattaggagc agtaggtgta aaatctactt tcgcacttgt gctatccatc ttatcataac
     9301 ctgcaatggc atcataaaga atagctgcat cttctacatt ttgcgttaaa acgcctattt
     9361 gatcaaggct tgaagaataa gaagcaagcc catatcgact cactcttcca tagctaggct
     9421 taaaccccac acaaccacaa aaagcagctg gttgacgcac tgaaccaccc gtatcgctac
     9481 ccaaactagc caaagccaaa ccacctgcta cggcagcagc actaccacca cttgaaccac
     9541 ctggaactcg agcgaaattt aaaggattta gggtttttcc ataaaatgaa gttgcacttg
     9601 agcttcccat ggcaaattca tccatattag tccgtccata aggactaaaa cctttagatc
     9661 ttaaattttt aatagcagta gcatcataag gagctacata tccttgtaaa attttacttg
     9721 cgcaagttaa ttcccagtct tttacactga tattatcttt aatcgctata ggtatacctt
     9781 cacccccatc gcttaagtct ttacctaaga attgctctat ataagcacct attttatttt
     9841 ctttcttagc cttatcattg agttcttttt ttagattttc aagctcttct ttagagtatt
     9901 tcaaagcttc ttttaaggtt atcattcttt ttccttctgt ttctttgcca aatttttaat
     9961 aaaaacaacc gccactgcac aaaaaatagc ggtgattgct atagtagcta taataatgga
    10021 attggggata ggattatcaa gcatgtttta aaacctcagc gcaacgcatg caaggctcat
    10081 cctctttagc gctttctact ttccaacatc taggacattt gcaaagcgta gctttcataa
    10141 tcctaaagct ctcattctcc acttcaaatt cacacaaaac ttcaccctgt aaattttcat
    10201 caaaacttac cataaaccaa tcatttaatt catctttagg tatagaattt aaaagttttg
    10261 aatttgtgtc aagattaagt tctaatgttg atttgatcac tttgtctttt tttagtatat
    10321 cgatattttc aaagaatttc tcacgcacgc tcaataaaaa ttcatcatct atattaaaat
    10381 catattcaaa tttttcttcc aagctcaaat caaatacatc cttagcatcg ccttttatca
    10441 agctattagc atgctctaaa gcctcatcta cactataggt taaatttgga gctaataaat
    10501 ttaaaagttc tctagcgatt aaagccattg ccacttgtgc ggattttctg cgcttgctat
    10561 ttttagcatc acaatacagc ctgtctttgc ttatgtcaag ataaattcca cttaaatcag
    10621 cgcttaagaa atttaaaagc acattaaaac cttttgcaaa ttcataggct aagaaatttt
    10681 ctttagcact tttaaatacg cgtgtagcac gagtcagtat ccatttatct ataaagctaa
    10741 attcctctac ttctaaattt tccaagtcat tagtatttgc aagtaaaaat cttatggtat
    10801 ttcttatttt tcggtattgc tcgcctactt gttttaagat attgtctgaa atttttaaat
    10861 cagtagaata atcactcaaa agtatccaaa gtcttaaaat ttccacccca taagttttag
    10921 ctacatactc aggagctata acattacctt tggattttga cattttttgc cctttttcat
    10981 ccgtggtaaa gccatgggtt aagatacttt cataaggagc aaattcattg atagctgttc
    11041 ctacaagcaa agagctttga aaccaacctc tatgctgatc gcttccttct agatacatac
    11101 ttgctctttt ctctcctgca tcgtaaattc cgctatttaa aaccgcattc catgtgcttc
    11161 cactatcaaa ccaaacatct aaaatatcat aaactttttc taaattgtct gcattgtatt
    11221 ttgaattttg tggtattaaa tctttaattt caaattccca ccaagcatct gctccatgtt
    11281 tttcaaatat atttgccaca aaatcaaaaa gctcagcatc aaaaatcact tctttagtat
    11341 ttttatctct aaagaaagct ataggcgtcc cccaatctct ttgtcttgaa atacaccaat
    11401 caggacgatt ttccaccata gagcctattc tttttactcc gctttgtgga taaaattttg
    11461 tttttaaaat ttgctcttta gcacattctc ttaaagtttt gccttttaat tttggctcat
    11521 ccattaaaat aaaccattgc ttagtcgctc tataaatcac aggtttgtga gttctccaac
    11581 aaaatggata ggagtgtatg aatttagaag aatatagaag atgatttcct aaaagctcta
    11641 aaattttttc attagccttg aagatatgaa gtcctataaa ctcatcaagc aaatcggatg
    11701 gcaagagtcc tttgtggcgt aaggtttcat cataacaacc cccatcatcc acaggcataa
    11761 tcacttctat atcgtatttc aaacaagcat aataatcatc ctcgccatgt cctggagctg
    11821 tatgtacaag cccacttcca ccttccatta aaacatgctc acccataatc aagatggatt
    11881 ttcttgaatt taaaggattg atagcttcta atccttcaaa ctcttttgca ttaagctctt
    11941 tttgaatttc accctttgtc aaacctttag ctatcatact ttcaagcaaa gcactagcaa
    12001 aaatcaatcc ttctttagtg ataacatagt tttcatttgg atttaaagcg atagcttgat
    12061 ttgccaccaa agtccaagga gtagtagtcc aaatcactgc acttgctttt gagactccca
    12121 atttctgaca agattgctca tccaagtcaa aagccacaaa aatagaataa tcctctttat
    12181 cttcatattc tacctcagct tcagcaagag ctgatttagc cgcccaactc caaaaaacag
    12241 gtttagaacg ctcgcaaagc aaaccttttt tagcaatctc gcataaagtg cggtaaatcg
    12301 ccgcttcaaa ttcaaatttc atcgtaagat acggcttatc ccaatccgca atcacaccaa
    12361 gacttttaaa ttcatctctt tggatgttca caaattcgtt tgcatgctct ctacaaaatg
    12421 atcgaatttc ttttttactc aagctttttt tcttatctcc aagtttgatt tcaacttgct
    12481 gttctatagg caagccatga caatcccaac ctggagtaaa gcgaatgctt tctccattaa
    12541 aataatgcgt tttgataatc gtttctttta agattttatt taaagcatgt cctatgtgga
    12601 tatgcccatt agcataagga gggccatcat gaagagtaaa agctttcttc gcctctttgc
    12661 gttttgtttt cattttttca taagcgtaat tcttgctaaa ccatttttca aatctctttg
    12721 gctcaaattc tgccaaatta gcgcgcattg caaaagtagt atttggcaaa agcagggtat
    12781 ctttataatc cattgttcca cctagatgaa gtttttataa tcttaaattc tactcaaaat
    12841 aatttaaaat ttagctataa ttactataaa aaaggaaaaa attatgaaac atttgctttt
    12901 tcttatcggt gatgaactta taatgaatga aaattttaag gattatattt atcgtagtta
    12961 tgaaaataaa tttaaagaaa ttcatgaaac tcgttttcaa aataaaaccg ataaagaatt
    13021 accctttttg cttgaaaaat tactagacaa atatgatttc ataactcttt ttaccacgcc
    13081 aaaccactat gctaccatag caaaaatttt agccacccta agtgaagaca atctagtctt
    13141 aaaagaagat aatctagtcc ctgataaagc ttattttcaa aaggatagtt ttatatgtga
    13201 ttttatcaat tcaaaaatca atgttatcaa aacaaatcca ggacaaaaac ttcctccttt
    13261 gcttggagat atttttccta attttgctta tttttgttta ttaggcatag atgatgagag
    13321 tgccgtttta ctgcttgata ccttaaccaa atcttacgaa gtcagtataa aatcaagcaa
    13381 gatattagaa aatcttactc ttattaaagc aagttgtgtt aattttggca agctagatgg
    13441 ttttttaacg agtgtaaaaa atctttttgg acaaaaagta tttttaggca aagatcctat
    13501 acaatttatc gtttcaaaac ttttagaaaa aaagatcaaa atttcttttg cagaaagctg
    13561 cacaggcgga ctttgcgcaa gcactcttac aaaatttagt ggagtgagtg aaatttttga
    13621 aggttctatc gtaagctatt ctaataaaat caaacacgaa tggttgggta ttagtgaaag
    13681 cattttagaa aatcaaggcg aatacagcga gcgttgtgtg tattttatgc ttaaaggtat
    13741 ctttaagacc gcaaaacctg attttgcact agctattagc ggtgttacag gagagcaaga
    13801 tgaagggttg gtaaaatcag gcacagttta tataggagcg atgtttaaag atggaacatt
    13861 cgtccaagaa actctttatt taagtggcga ccgtgaattt atgcaaaaac aagctacttt
    13921 agcgactttt tgcttgcttt taaaattaaa acctgaaata tttgaatttt aaagggactg
    13981 atagtgagag aaattaattt aaaagaagac ttagaaaaaa tttatccctt aataaaacaa
    14041 ttaagaaata atctgtcttt agaggatttt ttagaaaaat ttcaacttgc taaaaaactc
    14101 aacattataa actttttgca tatgaagaca agggggcttt caaagcagct tgtggagtta
    14161 tgccctttaa tgtgctttat cataatcatt gtctttatat ttgtgatttt gttgtagatg
    14221 aagctttaag aggtaaaggt gtgggtcaat ctttttttaa aaaaattcaa atttgggcaa
    14281 aaaaacaagg atatgaagaa ttggaattaa gctcaagttt ttttagaaca caagctcatg
    14341 aattttatat ccaaaaaatg gattttgaaa aatctggctt tgtttttaag aaaaatatca
    14401 aactataata ttttttgatt aagctttgca ttttataatt aatattatta ttttttaatt
    14461 aaggattaaa ctatgaattt caaagaactg atttcaaaac gcagagcttg taaacttttt
    14521 aatgataaaa aaatcagtga agaagatttg cattttatct tagaaagtgg aattttagct
    14581 cctagctcac atggatttga gccttggaaa tttatcatac tagacaaaaa agaagacaat
    14641 caaaagcttg ctaaactttg ttttgatcaa gcaagcgtag caagtgcgag tcataatatc
    14701 attcttttag caagaaaaga cttgcaaagc aaggatgaat ttgcacaaaa acagattcgt
    14761 cgttttgcag gctccaagga agaaaatttt caaagaattt taaagattta tactcacgat
    14821 actgatgcaa tgaatgaaaa agaactttat cattttgcac aacttcaatg ctatcttgca
    14881 atgatgcaaa tgtcgctagc tgcgatgagt ttggggattg attcttgtat gatagggggc
    14941 tatgaaaaag ataaggtgga tgattttctt aaacttgagt atccttttga aacggctgtg
    15001 atcttatctt tgggctatca agctcacgag ccaaaatacc ctactcaacg tttaaaattt
    15061 gatgaagtgg ttgaatttta taaggagaag tgatgaaaac agaacttgaa atttttagca
    15121 caagatattc ttgtagaaat tttaaaaatg aaaaacttaa aaaagaagat ttggatacta
    15181 ttttagagat agcaagatta agtcctagtt ctttagggct tgagccttgg agatttttag
    15241 tggtgcaaga tgacaataaa aaagaagagc tggctcaaat ttgcaatcaa caacaacatg
    15301 taaaagattg cggggcgtta attatcattg tttcaaggct tgatttttta gattattttg
    15361 aagataagct tagaaaaaga gatatgagtg aagcagaaat tcaaaaacgc ttagatactt
    15421 atatgccttt tttacaatcc cttagtcaag aacaaaaaat atcctatgca agagaacaag
    15481 ctcatatagc acttgcgagt atactttata gtgccaatgc tttaaatata gcaagctgca
    15541 ctataggcgg ttttgataaa gaaaagcttg attcttattt atcacttgat attcaaaaag
    15601 aaagatcaag tttggtggtg gctttaggat attgcaacga taaaaaaaat cctcaaaaaa
    15661 atcgttttag ttttgatgaa gttgtaaaat ttatttaaat tttgctttta agcaaaattt
    15721 aaataaaaat aaactgattc ttttttgtat ttttactaag tctttgctta aattttatac
    15781 aattttgatt ataattttac atttaatttc acaaggcttg ttatgaattt acccaatatc
    15841 ttggcgattt ttagaatggt tttagcgcct ttgctatttt ttttgttaat tcataaattt
    15901 gaaaatattc atcaaagttg gattaactat tttgctgctt taactttttc attagcagct
    15961 ttaagtgatt ttttcgatgg atacatcgca agaacttgga aacaaactac aaaactaggc
    16021 ggaatcttag atccattagc cgataaaatg cttgttttag cagctttttt agggctttta
    16081 cttacaggaa aagctaatga atgggtaatt tatattatac tagtaaggga attttttatc
    16141 acaggtttta gagttgtaat gatcagtgaa aatttaaatg tcaatgcttc ttttgcaggc
    16201 aaacttaaaa ccgcttttca aatgactgcg ataggatttc taatcatgga gtggataggc
    16261 ggagaaattc tactttacat agctttgatt ttaactcttt attctggatt tgaatacatc
    16321 tatacttata taaaagctca gaaaaaagga gaaaaatgag atctttattg cttttaattg
    16381 ttattttgat tttgggaatt aaattttatt ctattgaatt tttagcaact gttttagtca
    16441 tctcattttt aattttcttt cacgaattag gacatttttt agctgcaaga tctttgggtg
    16501 taaaagttga agtctttagc ataggatttg gaaaaagtct tatagagcgt gaatttaaag
    16561 gcacgaacta tcgcttaagt gctttgccac ttggaggata tgttaaactt aaaggacaag
    16621 atgatatgcg tcctggtttt gaaaatctag acaaagatag ctatagcatt ttaagtcctt
    16681 taaaaaagat ttatattctt tttgctggac cattttttaa tctaatttta gctttttttc
    16741 tttatattat cataggaaat ttaggtctaa acaaacttgc tccgcaaata ggaaacatag
    16801 cgccaaactc tgctgcacaa gaaataggac ttcaaaaaaa tgatactatc ttagaaatta
    16861 acggtgtaaa aattcaaagc tttgatgaaa tttcaaagca tttaagttta gagcctttga
    16921 aaatattaat cgatagagaa ggaaaaaatt tagaatttac cctaactcca aaaataggac
    16981 aaggatataa tgactttgga caaatcgttg aaaaacctca acttggagtc agtccaaatg
    17041 ggacaagcac tcttgtaaaa catcaaggtt tagaaagttt taaatatgcc atacaagaaa
    17101 gttttcaagc ttctacactc atcatcaagg gtataataaa actcataagt ggtgaagttg
    17161 aagcaaaaaa tttaggcggt attatcacca tgactgaaat tacctcaaag gctgcacaaa
    17221 atagctttac tttgctttta tttatcactg ctttaatttc tataaattta ggcattttaa
    17281 atcttttacc tattcctatg cttgatggag gacatatact ttttaatctt tatgaaatga
    17341 tttttagacg caaggttcca cagcgtgctt ttgaatactt aagttacgca ggcatggcaa
    17401 tacttttaag cttaatgctc tttgcaactt ataatgatat atcaaggatt gcaggtgaat
    17461 aaaaaatttt cctaccctat tccaaatttt actgatagaa gaaaaagtat catcttttgg
    17521 cgctatttac gttttcaagc aagaaaaatt ctatattttc ctcaagtaag gcttctagaa
    17581 aaaacgctta atgaagaaaa aaataaacat ttaaaagact ttttctctca aagaccctat
    17641 gcttgctaca atgctataag aagattttgc gataaaagtt ttaaagcaaa tgaacgcgtt
    17701 aaaacactta tttatgatgt tgataaggga cttacttgtt ttaaatttct tcccgaagaa
    17761 caaatgattt tttcttttga tgaagatttt gagctttttt taggatataa ccataatgtt
    17821 tacgaagaag gtttttgggc tttttcttta aaatttaaaa aatacactat ttcacaatgt
    17881 aatttttgct ttactttaga aaataatctt ctactttctt gcatacaagg atataaatac
    17941 aaagatttta atattttaga aattaataaa attttaacta aaaaatgtca tggtttgcgc
    18001 cctgttgctt tacttataga atgctctaag atgctttgtg aaattttaaa acttcaagct
    18061 actttaggtg tacatgaaaa aaatcaaatc cgttctcaaa aaggaaaaga aaaaggatat
    18121 tttgtagatt atcaaaaaat ttggctagaa aatggtggag aattaataaa aatcgataaa
    18181 cacaaatact acaagctcca ccactcgcaa aaaaacctag aagaaatccc ttcacaaaaa
    18241 cgctccatgt ataaaaaacg ttttgccatg cttgaagaaa tcaaagtaaa tttagataag
    18301 acattggata ttcaagacta attaagtata ttttgatata atctagtctt gctttatgca
    18361 aaatccttgc tcatgaaaat gggctttaat atccataagg agaaaagatg aaacattatg
    18421 aggttttatt tatcttaaaa ccaacactta ccgaagagga agtgaatgcg aagttggaat
    18481 tcgttaaaga agtcctaacc aaaaatggtg cagaaattga aactgttgtt ccaatgggca
    18541 ctagaaaatt agcgtataaa atcaaaaaat acgaaagagg aacttatttt gtgatttact
    18601 tcaaagctcc tacaaactta attgcagagc ttgaaagggt gttaagaatc actgaagaag
    18661 taataagatt tttaatcgta aaatatgaaa ataaaaaaga aattgcagct tgggaaaaac
    18721 taagccacgg gattaagcaa tctaaaaaag aaatcaaacc tttagatgct cctgaaattc
    18781 aataaggaaa aagatgttta acaaagttgt tttggttgga aatcttacac gtgatataga
    18841 aatgcgttat gcacaaagcg gtagtgctat tggagcttcc gctatagcag taacaagaag
    18901 atttaccaca aatggagaaa aaagagaaga aacttgcttt attgatataa gcttttatgg
    18961 tcgcaccgca gaagttgcaa accaatatct ctctaagggt tctaaagtcc ttatagaagg
    19021 tcgtttaaga tttgaacaat ggaatgatca aaatggacaa atgcgctcta agcacagcgt
    19081 tcaagttgaa aacatggaaa tgctaggaaa caatcctcaa caaggtggaa attttaacaa
    19141 tggtggaaat aattatggag ctaataataa ttattcaaat tatgaaaacc aaagctacga
    19201 tccttatatg agtgaaaata atttcaaaaa agctccacag caagcacaaa caaaaacaca
    19261 aaatcctaac caaaaccaag aaaaaattaa agaaattgat gttgatgctt atgatagcga
    19321 tgacaccgat ttaccatttt aaaggataaa ctatggcaga aaaaagaaaa tactctcgca
    19381 aatattgcaa atacacagaa gcaaaagttg aatttattga ttataaagat acagctatgt
    19441 taaaacatgc tttatcagaa agatttaaaa tcatgccccg ccgcttaaca gggacaagca
    19501 aaaaatacca agaaatggta gaagttgcta ttaaacgcgc tagacatgta gctcttattc
    19561 cttatatagt agatagaaaa gaagtagtta acaatccttt cgaaggacta taagttatta
    19621 aaaaaggcaa aatcaatatt ttgccttttt ctcccctcgc tctagatttt aaaccaaagc
    19681 gtattttaaa acctcatcaa aatctttaac tccaattatt ttcatattat ctttaacctc
    19741 atcaggaata tcttttaaat ctctttcgta atttttcttt ggaatcaaag ctattttaat
    19801 atcagcctta tatgctgcga taagcttttc tttgagccct cctataggca atacattacc
    19861 cgctaaatct atttctcctg tcattgctac atcagaacga acttttttat cactaaaaac
    19921 tgaagcaata gctgtactca tcgtaattcc agcacttggt ccatcttttg gagttgcacc
    19981 atcgggtaca tggatgtgca aattataact atcataaaca ttagttttag gatcaagaat
    20041 catcttttta ggaattttaa tcttcccttc atcgattaaa accttaatca cactaaaagc
    20101 aattctagca gattctttca tcacatcacc caaacttcca gtaagagtta actctccctt
    20161 gcctttgatc ttaatcgctt caacctttaa aacatctcca cccacactgg tccatgctaa
    20221 gccattgact tgtcctatgc ggttttctcc atcatgcttt tctatctcaa aaactttttt
    20281 atctaaaaat tcatttaaat ttttaacatt gatacttact tttttgatat tttctaaaag
    20341 taatttttta gcacttttac ggcatagttc agctatcttt ctgcgtagat ttcttacccc
    20401 tgattctcta gtgtattcgc ttatgataag ctctatagtc tcatcattaa tatctaattc
    20461 actagatttt aatccatgtt ttttaagttc atcaggaatt aaatattttt tagtaatgtg
    20521 aaatttttca tttggagtgt aagagcttaa ctctataaat tccatcctat ctcttaaagg
    20581 agcaggtata ttgcttatat cattagctgt tgctataaaa atcaccttgc ttaaatcaag
    20641 attaaaattt aaataataat ccctaaattt agaattttgc tccggatcta aaatttctaa
    20701 aagaactgcg ctaggatcac ctctaaagct tctgtttaac ttatcaattt catcaagcac
    20761 aactacagga ttgatttgtt ttgcttcaat taaaccctga gtaatgcgcc ctggcatcgc
    20821 acctatatag gtacggcggt gtccgcgcaa ttcattcaca tcttctaagc cccctaaagc
    20881 tatacgaata agttctcttt ttaaggcctt agcgacagaa ttagccagtg aagtttttcc
    20941 aactcctgga ggcccataaa gacaaagtat aaccttagcc ccatctttat ctgctacacc
    21001 gcgtttttct aaaagctcac gaacagcaaa atactcttca atgcgctctt ttggtttatt
    21061 aagggcataa tgatcatgat ttaactgctt agccacttct ttgatatcaa gttttttctt
    21121 tgcttttttc tcaaaaggca catccaaagc ggtttcaata taagtttgta tcatagaagc
    21181 ttcagaatta tcctgatgta tacgttcaaa tttttcaatt tgctttttaa tttccttata
    21241 agcatcctcg tgcataaatt tctttttgct ttctaatttt ttataataat ctctaacttc
    21301 gtcttctttt tgattgtcac tacctaattc tttttgaatt tgtctaagtt gctcttttaa
    21361 aaaatattct ttattgactt tatcaatacg agaatgaact ttgtttttaa tttccttttg
    21421 aattttattg gcttctatct cttgggctat caagtctatt aattttaaaa gcttttcttc
    21481 tagatcggtt aagataaaaa attgataagc ttcttgcttt tttatacgaa cagtatttaa
    21541 aatcaaatca caaattctag aagcatctaa accctcatct atagttcgga gcaaatcagg
    21601 tgaaaaataa tggctaatat ttgccaaagc tctaactttt tcttttaaaa catccagtaa
    21661 agcttctttt tttgtgccct ctaaaaactc ttctttaatt agctctattt tagcctctaa
    21721 gggcttgctc gaaagtggtt ttataatcct agccttagca taaccttgaa aaagtatttt
    21781 tactctacca tcaggcaagg gaacttttct cataatcgtt ccaactaccc cacaatcata
    21841 aatttcatca aaagatcttc cattttcgag ctttgaaggg gctacaaaaa gcattgaatc
    21901 atttttaata gctaaatcca aagctttcat atttgctgaa tcgctaataa aaattggagt
    21961 aatcataaat ggatataaaa ataattcatc ttctactaaa ataggtaaat tacttggata
    22021 attttgcatt tcttcaattt gcatcagttt cccttaaatc taaaattttt caaatatact
    22081 tctataccaa ggaagttctg gcttgataat gctttgttga taaaactcac tttcttgcaa
    22141 tctttcttgg taaatttcag cactttgagt atgacctgta cgctcatata aatcctgtat
    22201 tgtatcattt aaataaaata cagctaaatt aaatttagtt aacatagtct gtactaaagg
    22261 ttcgtattct gtataaggat aatcatttaa aaaactatct atttcttttt ggctttcaag
    22321 cattaaagct tggttacgat ttggcacggc aaaggcatca aatttagctt tgattttaag
    22381 atagcgaata taatctgcat tgcgtgaatt tccaaatttt ttattatact catctaaata
    22441 aaactccgct aattgatatt cttcttcatc catatgtgct tgtgctaaga taatttgtgt
    22501 tgtttctaaa agcggatctg ctatatgctc acttgccata ccattataat gatcatcagc
    22561 tttttccaaa tctttatctt gcaaatcttt aatgatttgt ttataccatt catttgcact
    22621 taaattatac aatccttcat cattttttgt actgcaagca ctgaataaaa tccccaataa
    22681 aatacataga aagaaatttt ttttcattaa tttttacctt tttcattttt tagttaaata
    22741 cactatttta aatgctttat gattatttct agttaaaatt atagtgaaaa taaataaata
    22801 aatttaaatt ttggaactaa tattgcttat tttgtgataa aatattttat tataaactcg
    22861 aggagaaaaa atgacactag ctgttaaatg ccctatctta ggttttgaag aaaccaaaaa
    22921 tatggaattt tcaaccattg atgaagtgtt tgtaagactt aaaagtcttg atggaaaaga
    22981 tttttctttt gttcttatta atccttatct tataagacca gattatgaat ttgagatacc
    23041 tacatactac caagaattgc tttctttgac accagagtca aatatgaaaa ttttcaatat
    23101 agtagcaatt gctaaaagta tagaagaatc tactgtaaat ttcctagctc ctgtggttat
    23161 taatcttgat aataattcca tggtgcaagt aatcttagat actgtagctt atcctaactt
    23221 ttttcaagcg gatcaaattg caaattatat taagaagtaa tgaaagctga tttatatata
    23281 cttgctaatg gtgcgatggc gcaagctttg gcttatggat taaaagattc ttataatatc
    23341 tatatagtcg gtagaaattt agaaaagctt caaattttag aaaaagaagg ttttaaaact
    23401 ttactctata aagattttaa tatagaaaat aaaaatatta tcttagcttt taaaccttat
    23461 gccttagaaa gtgtcgcagc aaatttaaaa ggcaaggcaa aaattttaat ttcagtttta
    23521 gccaatacgg attttgataa attaaaactt atccaagccc aaaattatgc aaggataatg
    23581 ccaaatacag cagctaaata taaagcttcc acaactcctt atgttttaaa aaattcaaat
    23641 tttaaagatg aagtcataga aattttaaat acttttggca aggcttatga gttaaacgaa
    23701 gaaaaacaaa tgaatgctgc catggctata agcggttgcg ctcctgcttt tttagcatta
    23761 gtagctgaaa gcattgctaa tgctggcgtg tatgaaggat tatcaaaaga gctgagttta
    23821 aatctcactc gttcgctttt taaaagtgct gcagccttgc tagaaaacga gcacccagcc
    23881 atcattaagg aaaatatctg ctcgcctgca ggtgttacca taaaagggat taaagtatta
    23941 gagcaaaaag gtatccgtgg gacttttttt gaggctctta atgctagtgc aacatgaaag
    24001 ttgcattctc gcttttagaa ttaattcttt gtataattat cctaggatta atttttacaa
    24061 gtatttctaa attattttat cagctaaatg acaatcatga ttatttaaat tattttgaaa
    24121 gattatacac actgcaagat aaactttata ccgatcctca tcaaagagat ataaaacttc
    24181 atatacagaa tttaaaaact tttgatttta aagaaaactt tgtaaatgat aatatctttc
    24241 aatttaaaaa a
//
LOCUS       DAQUWA010000021        24002 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.021, whole genome shotgun sequence.
ACCESSION   DAQUWA010000021 DAQUWA010000000
VERSION     DAQUWA010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24002
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.021"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(625..2991)
                     /locus_tag="R8X70_000723"
     CDS             complement(625..2991)
                     /locus_tag="R8X70_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HEF2928522.1"
                     /translation="MKIIFLVLLSICTLFSFELALNTGRENNQAFAVLHASNDLDFTC
                     QKIVIEDKIHFECEIMGVVDNKLSDQSFTAFDLKFIKEPQKIKMIILPKMSARMFDLS
                     QNIYADKELNSSSMHKSKSFTFIFTPELEHVKDYDGLDFNINFPYESLPYVGALDLNS
                     DPVIIPQSADINTYLRIKNEYDKANYTQVVIDAQNAINRYRGSIFMNEFILYKLRAQS
                     QIYTQDPSMRDQQVLEKMIDEAKNWNRTFTSDKNFPEVLHIMLRTYIALSQRADIEYT
                     MSILNNEQPNSYFTQLARLDYADYIYPLNEKERAIDIYEDIYFNTKNLDLAARAAMSL
                     IKDYLANNQIDKAVQYVNTILKANPEYFPKDMFRSLELAKLFNQHKQYDISASIYEDV
                     FVKMPKIDDRYEQVLKDLALTLAMTSRSSDANKYLDLYMDNYLDGKYLDEIRKANDEV
                     FFALADNNATFLHQRYANLMKEYAQKDENIVNKALSEDVALYYKEGNLSAVLTYKDQI
                     ENKKLTNSAKLLEQAAIQLLNNDLKADNCINAVNIFTQFNAYEIGQKIENKKQMLACL
                     MRTSNMQQAMDYIDKNHNEDSIFYGLQKASILYDNKQYPLALNIAREIANSRILKSDE
                     ENFKAYYLQFLSYLKMDDYNMAIKILQILESFPMNFTMVEAYDNLLIYANDHNMQTTI
                     LTYAPKAIDYQNLKGINLFSPNLEFIYLDTLAKTNQNQEALAVLIDLLKLKLSDEDRA
                     RALYIQSMTYERMQNTQAQKESLKQCLELKTTSNWQNLCRDKNQILAQ"
     gene            complement(3004..4377)
                     /locus_tag="R8X70_000724"
     CDS             complement(3004..4377)
                     /locus_tag="R8X70_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEF2928523.1"
                     /translation="MLGNIDLSSLNIPLSYPFAFLIAVAIVLLLCSGFWKFHRTFYMA
                     TSSLSLIVSVFLILNNIAAQGLEAKGFLGTLNNDIVSLYASLVILCFSFLYLLMQKEE
                     NQGEFYSLFLFMVAGLLLMVSSSNLILIFIGLESSSLALYTLIAMRGSNNAISSAIKY
                     FSVAAVGSGFFVMASALIYIRTGTLDLGLKLALDKDPMLLGAGVMIFVLCAIKLSLAP
                     FHFWLKDVYSSAHVNLVAFISVVPKIAMFVVVIRLFSFLNHLGFENILNVLAVFSMLV
                     AALAALSQKDVKKMFAYSSIVHSSFVLAACIPLLNAADDVLNSIFVYWVLFGFANYGV
                     FLILSTFKGSSFEEFNALLFKKPLIALSLSFCILSLAGIPPFGAFWGKVMVLKTLIVA
                     DYWYLALFMALASLIMLYAYLKLVIHALFVKTQAKVSEHLNFIQSFILALCTLISVFA
                     LFLLLKI"
     gene            complement(4367..5857)
                     /locus_tag="R8X70_000725"
     CDS             complement(4367..5857)
                     /locus_tag="R8X70_000725"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEF2928524.1"
                     /translation="MLNYLIFFPLIAAFVTLVLNRGGIKVFSVIASLMVLGLNIKIWQ
                     DYLNGINLEYQLPFKVVNFMSYHIGADSIALILMLLSSLMIFLSFLFLKIEQKAMVSC
                     IFFLEFAIMGLFSSLDGLLFYVFWEFSLLPLLYIMGVYGKDYRAGIKFFIYAFAGSIL
                     MLLALIYQAYATYKLLNIFTFDIEIWKNNASAMSFNEQILLFGAFFIAFVIKAPLFPF
                     HTWAPKVYANSPILVSMMLVAFKMAPFGFLRFCLPLFPDASVYFMPLVVALCIVSILY
                     NALIAYRASNLKELIAYSSISHLGVMILGIFSFNALGLSGAVFYMFAHGIVTGALFLM
                     AELLYKKYGTLEISYYHSLANKAPLFTIFFTLILLASISLPLTISFVGEFLILLGVAK
                     LNLLYALLAGLVIILGAIYMLHVFRKMFFMQKESQLETCSLHAREILSLIPIVVLIFY
                     LGIAPKIFLDPLNKDADFIVEKMKERAIDDQTIRFLNHLEGENNVR"
     gene            complement(5859..7649)
                     /gene="nuoL"
                     /locus_tag="R8X70_000726"
     CDS             complement(5859..7649)
                     /gene="nuoL"
                     /locus_tag="R8X70_000726"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEF2928525.1"
                     /translation="MQNLALISLFSPFVAFLFASCFALSERKIFVAYVCSLLIGISAF
                     CSLYLLFNNQAFNVSLFEWFIGLSFGFNIDAISLTMMSVVGVVATCVHFYSIFYMAHD
                     KDFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNNTYSFAAN
                     EAFIMNRIADLGMLLGIFWLYIQAGTLKYNEVFAIAQNLDHNALVLIASCLFIGAMGK
                     SAQFPLHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRAGEIYSLVPEVSYFIALLG
                     AFVAIFAASMALVARDLKRIIAYSTLSQLGYMFVAAGLGAYGIALFHLVTHAFFKSLL
                     FLGAGNVMHAMDDQLDIKKMGGLFKSLKITAIFMTIGSLALAGIYPLAGFFSKDLILG
                     YSFIAHYHGIFLILLISAFLTAFYSFRLLMLVFFTPSRHDKHPHEASKIALLAMSPLV
                     VLAIIAGLFEHSFFEYLSTQLIFIDAQNKLVMICASVAAVLGVVLAIIAYKASWFKDS
                     IEQNKIHKLLSNDYFIPKFYHEFIVSKYESLCAVLKHCDTYIFDAIVDKIAYYCNLIS
                     QKIIMSNSLNLMLRFLVAGFVILLILVWVV"
     gene            complement(7652..7945)
                     /gene="nuoK"
                     /locus_tag="R8X70_000727"
     CDS             complement(7652..7945)
                     /gene="nuoK"
                     /locus_tag="R8X70_000727"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEF2928526.1"
                     /translation="MVEKYFFIAIAMFIVGLIGILKRQNLIMLFISSEILLNAANLAL
                     VAASKMHQDLNGQVFALFVMGVAACEVAVGVAFCVLWYRRKGTLELKSLKEEV"
     gene            complement(7945..8460)
                     /locus_tag="R8X70_000728"
     CDS             complement(7945..8460)
                     /locus_tag="R8X70_000728"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEF2928527.1"
                     /translation="MIEILAFTFFSVVVLGFFLVAVLSTNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAMMFFDSSKEFKEKLRARKSFFLLVILSAVL
                     LLFMLLGFKHQNIAGDLALSDPNLFDYNKQLAFAIFSKYLLAFEFIAILLLIALICAI
                     VLTHKELTKER"
     gene            complement(8457..9122)
                     /gene="nuoI"
                     /locus_tag="R8X70_000729"
     CDS             complement(8457..9122)
                     /gene="nuoI"
                     /locus_tag="R8X70_000729"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEF2928528.1"
                     /translation="MKNYYLIDEKRKTPTSTWQKISQALKRSVKLELFVGLWVVMREM
                     LKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENARKKVGNYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDADLLVKKTPNYYEVLQEREKNLCTDEECTLPNLAPQG
                     EVK"
     gene            complement(9132..10130)
                     /gene="nuoH"
                     /locus_tag="R8X70_000730"
     CDS             complement(9132..10130)
                     /gene="nuoH"
                     /locus_tag="R8X70_000730"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEF2928529.1"
                     /translation="MSDFAFFALEALIKCIIVIAIFATLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKLIFAIAPLIAAICAFVSLAAIPMLP
                     EFTLFGRTIQPLIADINVALLFVIGTSGLCFYAIFLGGLASNNKWSIIGAARGLVAII
                     SYESVGALALIAIVMLVGSFSLIDINNYQSDGFFSWLIFKQPLAFALFVIALFIETNR
                     TPLCLTENEADIIAGYGTEYSGLRWGMFFIGEYASMIAGAILITLLFLGGFNDFYFIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMRMCYLILIPLAVLNLLITAFAVLI"
     gene            complement(10123..12585)
                     /locus_tag="R8X70_000731"
     CDS             complement(10123..12585)
                     /locus_tag="R8X70_000731"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEF2928530.1"
                     /translation="MTIKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNIQRHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRGGDSVDNSFKESMGKDAYAIWTKFQKSLIGPANGDMLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDVKQSGISNQKAKIYRVSNDFAFA
                     SLNKAARFAFDTQNEASKDEKAFKELVELFEKNEIRNIKFNSFITNEEALILQNFKKK
                     FGLNLINNEALKFKDFLEEFISNGGEFYNATTQDITKSDFLVVAGTLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPIEDAGIAKYSKNFISHTHKSGDEEQILYFLLQKFTQDENIK
                     ANLAEFFVNENKEIEESINEEVIEQVVEKDEEGNEISKEVKKVVPKKVKKTIEVKRSV
                     FAKNLGIDEDKLEDLLLKKANFTLIIGSDFYFHKNAKKLAKLLALIQNTTPFKVFLNP
                     THTNTLGVAMICDLDKNTQEGKTLGYNEKGDFSFSYEEHANLASASLNQQEGTFLNYD
                     KKVVPTNAALEFDGYFLNDLANALGFDEEYTINYTKRLPINKGFSPLEFDSLDNFYTN
                     GGECKRGYDLNLECHKKSAKNEFIAPHLQNLTLQEDEILLYSANPSYQFGRFSNRASA
                     TNEAIFLGVSQNLAKEKNLQDKDLVKLKIKDKELSLSVRIDKDIKNGAFLPYFDEKID
                     TLSFFDERFIVANLEKLGASHE"
     gene            complement(12582..13274)
                     /locus_tag="R8X70_000732"
     CDS             complement(12582..13274)
                     /locus_tag="R8X70_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928531.1"
                     /translation="MSYERALCFVDMLSLKNKILCEKIQGENIYISCLEDKNLNAKFY
                     KCEIASLSYVLALLCKMSEMDNFQDLDEGYLSAESCLGEEEASEILDFLENAKYLIVD
                     ENINSYKDSENIKYFLNFLSQKYKLKILDSNEKECDFKNAKLSTLKELDSYDGLVLFR
                     ANLKDDNLHCSKQFLQIAKCKDKSEVEVLAKDFSLKTTLCLDENLQGTIAFLNYDQQG
                     FDFTPIRIKEAK"
     gene            complement(13271..13498)
                     /locus_tag="R8X70_000733"
     CDS             complement(13271..13498)
                     /locus_tag="R8X70_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase subunit E family
                     protein"
                     /protein_id="HEF2928532.1"
                     /translation="MRRVDLRKSKELFEDLAQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFVKEQGCELLNSLKFNQVDWTIVIKKESV"
     gene            complement(13495..14721)
                     /gene="nuoD"
                     /locus_tag="R8X70_000734"
     CDS             complement(13495..14721)
                     /gene="nuoD"
                     /locus_tag="R8X70_000734"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEF2928533.1"
                     /translation="MQIPSKLKPYYENIAFEQEDSKMIINLGPQHPSAHGNLRLILEL
                     DGEQVVKARPTIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRIASHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPEGFLNELLAFCDKFPKDIADYEALLDDNRIWRLRTENV
                     GVVSKEQAMNWGCTGVMLRGSGVRYDIRKEEPYLLYNEIDFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCAALYKDTPPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            complement(14723..15517)
                     /locus_tag="R8X70_000735"
     CDS             complement(14723..15517)
                     /locus_tag="R8X70_000735"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEF2928534.1"
                     /translation="MMRKYSDKKNAQLQNYYKDRFYHAPHTQKLDVNESAFKQDYEVL
                     KTEVDIINSFIELDFWVIEIKKEDNVKTLQMLHTLGYLNFTEASAIDFVADKNGFEVF
                     YQLLNLEKRLRVRVRTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRI
                     LMPDDWYGHPLLKTYPLQGDEFAQWYEIDKIFGKEYREVVGVEQRDPGFADDKDTLNF
                     ARLYHEVPKGGSRKEVSFKQEYQEDGGVAFVKKVKRDEAKILEKRR"
     gene            complement(15514..16017)
                     /locus_tag="R8X70_000736"
     CDS             complement(15514..16017)
                     /locus_tag="R8X70_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEF2928535.1"
                     /translation="MAEHQVNYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     IAPKRLV"
     gene            complement(15999..16388)
                     /locus_tag="R8X70_000737"
     CDS             complement(15999..16388)
                     /locus_tag="R8X70_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HEF2928536.1"
                     /translation="MSHIDASHPYFGIFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPVKQANKINSQFFIVALIFILLDIEVVFLFPWALIFKDLGWFGLLE
                     VFVFILLLGVGFLYAYKKGAFAWQSIK"
     gene            complement(16507..17172)
                     /locus_tag="R8X70_000738"
     CDS             complement(16507..17172)
                     /locus_tag="R8X70_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEF2928537.1"
                     /translation="MLEVKNLGKFYEFKKHWYLKKEKHLIFENINFSLKENENLMILG
                     QSGAGKSTLARILCFLENPSFGEIIYKNLNPHSLDKTKQRLLRKEIQYCFQDQKAALN
                     PYKKIKNLIQDGLENFNIKKEQEKILEFFDRFNLKKQILEQKPYELSGGEATRVGLIR
                     ALILEPKVLILDEITSSLDMKNSKEILKFLYHYQQENLISYIFITHQDGFFVNFKCKK
                     MKL"
     gene            complement(17165..17875)
                     /locus_tag="R8X70_000739"
     CDS             complement(17165..17875)
                     /locus_tag="R8X70_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928538.1"
                     /translation="MKVRNLSLKLNQKKIFENISFDIKIAKSLMIVGESGVGKSLLGK
                     SLIRLLDPKFEINADEWSFNEVSVFNLNQNELRAFRSKVGLVLQDAELSLYPYLNIGN
                     LFHLILKTHTKLNQKDRKRYAFDLLEKLGFDDVDLLWHSYANELSLGMARRVSLALAL
                     LSKPQILICDEITASLDKENVQKIIQILKKLKNTLGLVCITHDLNLVNSLADEVLFLE
                     KNQAQLFRVDEFLRIYHA"
     gene            complement(17872..18627)
                     /locus_tag="R8X70_000740"
     CDS             complement(17872..18627)
                     /locus_tag="R8X70_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2928539.1"
                     /translation="MFLILSALFAPLLAPFDVLESHLNHLHQAPNLTYYLGTDFLGRD
                     VFSRLLFALRISLFIGICSSFLSIFFALFYLFLARCFFYTFWMRILDLFLALPAFLLM
                     MFFQSFVGVNIFLMIFLIALVHWPFIARIVESELKRLENLDFYKASIVLGRTKFRAFF
                     KDLLPALKSLIFVLFIFNIIHAIATEATLSFFGLGLGFNIPTLGTLLNESSKAIFIGA
                     WWMILFPLLALMFLFLPLLWLGNYLQKIGGVRS"
     gene            complement(18653..19597)
                     /locus_tag="R8X70_000741"
     CDS             complement(18653..19597)
                     /locus_tag="R8X70_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2928540.1"
                     /translation="MLKRLVFSIFIAFFSTFLCFVLLYFSKGSVAYANKVNSQSKELV
                     QRIEANLGLDKPLLGQYQIWLFKALKGDLSVSFLSGESVLKLIKERMANTLILSLSAL
                     VLLFLLSVFLALLGHYYKESFIDKLITFLAFNFFALPPFVLALFFVLIFGIFWQVLPI
                     TGTSDIGFEDDFFNRLKHLILPVLVLVLSHLALFLRIARNFINETFSQIFVQNLYARA
                     LREKDIYFLVLRYSLSPIIAYFGGSALSFMMGTYVVESVFAYEGLGSLLFESILFKDF
                     PMALALIFFSVLLAAFFTFLSDVFAWILNPRLKRLKFV"
     gene            complement(19598..21136)
                     /locus_tag="R8X70_000742"
     CDS             complement(19598..21136)
                     /locus_tag="R8X70_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEF2928541.1"
                     /translation="MLRWFILLFLLFFNVEAKIPKDTLIVAVENEISRINPAYSEDHD
                     AVINLVFSGLTRFDEHMSLKPDLAASWNVSKDGLSYDIFLREDVLWHDGVKFSADDVK
                     FSLEAFKNPKNNSSVYVNFEDIKSIEILNPYHLKITLSKPFPAFLDALSIGMLPKHLL
                     SDKDLNTASFNQNPIGTGPYKFVKWKKGEYVEFKANENFYLTKVKTPRLIIKHIFDPS
                     VASVELKNGKIDAALIDVSLLNIFKKDENFKILRERSADYRALMFNLENEFLKDIQIR
                     KALNYAVDKQSIVKNLLHDYGFVANHPLERSWADSKAFKTYEYNPKKAQDLILALGFK
                     KNDEGIFEKDGKILDFEIWTMSNDPLRVSLAGILQSEFKKIGVIAKVVAKPAGSFDYS
                     KVDSFLVGWGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTLN
                     LEERKKYYKEFIDALYENPPFIFLTYLDFALVYNAKLEGVKARNLGHHGVGFTWNIYE
                     WSKK"
     gene            complement(21240..23978)
                     /locus_tag="R8X70_000743"
     CDS             complement(21240..23978)
                     /locus_tag="R8X70_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000392313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEF2928542.1"
                     /translation="MFKDRIFNDYARCYAYGIDASCYFYIPKIVIIAKNEDEIKQIIQ
                     LANTYKTPITFRAAGTSLSGQSSCDGVLVVIKFAFKKIKINKDASEITLGCGVVGIHA
                     NESLAFLKKKIGPDPATINSALIGGIINNNSSGMCCGTKDNSYKTLRSIRVILANGSM
                     LDTSDALSVARFKDENKKLINELREIKEEINANKELKDLIIKKFKIKNTTGYSLNAFV
                     DYDDEIDILAHLLIGSEGTLGFVSEVKLAVLDDLEFKACALLFFDNINNAANTIKEFA
                     KVDFISSAEIMDYASLKAASNYDELRDILADIKEGNTCVLIQSEHSNELKVDENINKI
                     KEISKLAYKSYFSKNKAEYDLWWKIRKALLPIAASLRKAGSTVITEDVCFNIEDLADG
                     IKSIQELFYKYGFSDNGIIFGHALAGNIHFIITPDLNNKLEFDNFSNLVKEMSNIVAS
                     YGGSIKAEHGTGRMVAPFVEVEWGKQAYLINKKIKSIFDKDNLFNPDVIISDDKDIYK
                     KNIKQASWIDEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKA
                     KLKDIKKYYNHLVDSSCAACGVCSFSCPLGINFADFSLKYRKNNIGFISKILGNLAYK
                     NHEKTLKIAKFSLSIANKFDNLSLDNKLEKASNFLSIIPRTRAYLPKVNDYELKSRKR
                     AYNVVYFTSCLNKSFKPNEKMHDKRSLQEVFESLCKKANIGIIYAPNDLCCGKAYENF
                     QDIQDKNIQKINDFLSNIDSPIVLDHSACSAKLISDHSKYEIYDLSEYLLKFIAPKLR
                     IDKINENVGLYIMCAARKLGLNENIIKLAKLCTNGKVLIDNDTYCCGFAGYKGFFKPQ
                     LNINATKGFKKFYAKTNIKRGFSTSSTCEIGLSDATGISWQHIAYLLDECSEKQFN"
BASE COUNT         8751 a         4516 c         2971 g         7764 t
ORIGIN      
        1 aactaatatg aaatattgat tttacatatt agtttatatg ttggctaata tatacaattt
       61 agattgatat gcaagtatca atctaaagat tttgattcat tgatactttt aacttattat
      121 ttactaacac ttttaattgc ttattcatta atatctttaa ttcgttattt gttaagttct
      181 aggttaggta ttggtttgtt tttatagttc cttatttact agtttattct gtattttatt
      241 gttatattgt tgctcttgtg aattaatttg cttatccatt gaatttattt ctcacttcac
      301 ttaaaataaa tcaccttctt gattaaattc cttacttaac ttcatgtttt gcctactcga
      361 aaaaatgact cactttatag attgtaaaaa ttaatatacg ctatataact ttgttcgctt
      421 ataaatttag acatatttat acccaaaatt gaaagctagc atggaaagaa ctattaaaga
      481 taaaaagatt tttataaaga aaaatatagt aaatttctta aaaataaaaa tatgatttta
      541 gtttttatta tgatgattta aaaaatccaa gctaagcaat cacaaaacaa aaatcatctc
      601 aatgcataga aaatcaaatt aagcttattg ggctaaaatt tgatttttat ctcgacataa
      661 attttgccaa ttagaagtag ttttaagctc caaacactgc tttagacttt ctttttgcgc
      721 ctgagtattt tgcattcttt cataagtcat actttgtata tataaagctc tagccctatc
      781 ttcatctgaa agctttaatt ttaacaaatc tattaatact gctaaagctt cttgattttg
      841 attggttttc gctaaagtat caagataaat aaattctaaa ttggggctaa aaagattaat
      901 tccttttaaa ttttgatagt cgatagcctt gggcgcataa gttaaaatcg ttgtttgcat
      961 attgtgatcg tttgcgtaaa ttaataaatt atcataagct tcaaccattg taaaattcat
     1021 aggaaagctt tctaaaattt gtaaaatttt aatagccata ttataatcat ccattttcaa
     1081 ataagacaaa aattgcaaat aataagcttt aaaattctcc tcatcactct ttaaaattct
     1141 agaatttgct atttctcgag ctatatttaa agctaatgga tattgtttat tatcataaag
     1201 tatagatgct ttttgcaaac cataaaaaat agaatcttca ttatgatttt tatcgatata
     1261 atccattgct tgttgcatat ttgaagttct cataagacaa gctagcattt gttttttatt
     1321 ttctatcttt tgtccaattt cgtaagcatt aaattgtgta aatatattaa cagcattgat
     1381 acaattatcg gcttttaaat cattgtttag aagctgaata gctgcttgct ctaataattt
     1441 tgcagaattt gttaatttct tattttctat ctgatcttta taggtcaaaa ctgcacttaa
     1501 gttaccctct ttataataaa gcgcaacatc ttcgcttaaa gctttattga ctatattttc
     1561 atctttttga gcgtactctt tcatcaggtt tgcataacgc tgatgtaaaa atgtagcatt
     1621 attatccgct aaggcaaaga aaacctcatc atttgctttt ctaatttcat ctaaatattt
     1681 tccatctaaa taattatcca tatataaatc aagatatttg ttagcatcac ttgatcttga
     1741 agtcatagct agggttaaag ctagatcctt taaaacctgc tcatatctat catcaatttt
     1801 aggcattttt acaaaaacat cttcataaat acttgcactt atgtcatatt gtttatgctg
     1861 attaaaaagc ttagcaagct ctaaagatct aaacatatcc tttggaaaat attcaggatt
     1921 ggcttttaaa attgtattga catattgcac agctttatcg atttgattat tggcaagata
     1981 atctttgatt aagctcattg ccgcccttgc tgccaaatct aaatttttgg tgttaaaata
     2041 aatatcctca taaatatcta tagctctttc tttctcgttt aaaggataga tgtaatcagc
     2101 ataatcaagt cttgctagct gagtaaaata actattgggt tgctcattat ttaaaatcga
     2161 catagtatat tctatatcag cgcgttgcga taaagcaata taggttctta gcataatatg
     2221 caagacttct ggaaaattct tatcgcttgt aaaagtacga ttccaatttt tagcctcatc
     2281 aatcattttt tccaaaactt gctgatcgcg catacttgga tcttgagtgt aaatttggct
     2341 ttgtgctcta agcttataaa gtataaactc attcataaaa atactaccac gatagcgatt
     2401 gatagcattt tgagcatcta taaccacttg agtataatta gccttatcgt actcattttt
     2461 tatacgcaaa taggtattaa tatcagcact ttgagggatg atgacaggat ctgaatttaa
     2521 atccaaagct ccgacataag gtaaactttc atatggaaaa ttgatattaa aatcaagtcc
     2581 atcataatct tttacatgct ctaattctgg agtaaaaatg aaagtaaaac tcttgctttt
     2641 atgcatacta gaagaattta actccttatc tgcataaata ttttgcgata aatcaaacat
     2701 tcttgcactc attttaggca ggataatcat cttaatcttt tgaggttctt taataaattt
     2761 tagatcaaaa gcagtgaaac tttgatcgct taatttatta tctactacac ccataatctc
     2821 gcattcaaaa tgtattttat cttcaataac aatcttttga caagtaaaat ctaagtcatt
     2881 actagcatgt aagaccgcaa aagcttgatt gttctcacgg cctgtattta gggctaattc
     2941 aaaagaaaaa agagtacaaa tactcagcaa taccaaaaat ataattttca tacaataatt
     3001 atattatatt ttgagtaaca aaaataaagc aaatacacta atcaaagtac aaagagctaa
     3061 aataaaactc tgaataaaat ttaaatgctc cgaaacttta gcttgagttt ttacaaataa
     3121 agcatggatg actagcttta aatacgcata aagcataata agcgatgcta aagccataaa
     3181 aagagctaaa taccaataat cagcgacaat taaagttttt aacaccatca ccttacccca
     3241 aaaagctcca aatggcggaa ttccagctaa tgaaagtata caaaagctaa gcgatagtgc
     3301 aatcaaaggc tttttaaaca acaaagcatt aaattcttca aacgaacttc ccttaaaggt
     3361 actaagaatc aaaaacacac cataattagc aaaaccaaaa agcacccaat aaacaaatat
     3421 agaatttaaa acatcatcgg ccgcatttaa caaaggtata catgctgcta aaacaaaact
     3481 agaatgcact atagaactat aagcaaacat ctttttgaca tctttttgac tcaatgcggc
     3541 taaagctgca acaagcattg aaaatacagc caatacattt aaaatatttt caaatcctaa
     3601 atgatttaaa aagctaaaaa gtctgataac tacaacaaac attgctattt taggaacaac
     3661 agagataaaa gcgaccaaat ttacatgtgc tgaagaatac acatctttta accaaaaatg
     3721 gaaaggagct aaagaaagtt tgatagcaca taaaacaaaa atcataactc ctgcgcctaa
     3781 aagcatagga tctttatcaa gagccaattt taaacccaaa tccaaagtgc ctgttctaat
     3841 ataaatcaaa gccgacgcca taacaaaaaa gcccgagcct actgccgcaa cgctaaaata
     3901 tttaatagca cttgaaatag cattattact tccgcgcata gcaataagtg tataaagagc
     3961 caaggaagaa ctttcaagtc ctatgaaaat caagatcaaa tttgagcttg aaaccataag
     4021 taaaagcccc gctaccataa ataaaaacaa actataaaat tcgccttgat tttcttcttt
     4081 ttgcatcaaa agatataaaa acgaaaaaca taaaataacc aaagaagcat acaaagaaac
     4141 aatatcatta tttaaagttc ctaaaaatcc ttttgcttct aagccttgcg cagcgatatt
     4201 atttaaaatt aaaaaaacac tcacaatcaa agataaagag ctagtagcca tataaaaagt
     4261 tcgatgaaat ttccaaaaac ccgaacaaag caaaagcacg atagccacag caatcaaaaa
     4321 tgcaaaagga taggataaag ggatatttaa gctgcttaaa tcgatattac ctaacattat
     4381 tttccccttc taaatgattt aaaaatcgaa tggtttgatc atcaatagct ctttctttca
     4441 ttttttcaac gataaaatcc gcatctttat ttaaaggatc taaaaaaatc tttggtgcta
     4501 tacccaaata aaaaattaaa actactatag gtatcaaaga aagaatttct cttgcgtgca
     4561 aggagcaagt ttcaagctga ctttcttttt gcataaaaaa catttttcta aatacatgaa
     4621 gcatataaat agcacctaaa ataatcacaa gtcctgccaa aagagcataa agtaaattaa
     4681 gttttgcaac acctaaaaga attaaaaatt ctccaacaaa agatattgtc agtggtaaag
     4741 atatacttgc aagtaaaatc aaagtaaaga aaatagtaaa taaaggcgct ttattggcta
     4801 aagaatgata ataagaaatt tcaagtgtac cgtatttttt atataaaagt tcagccatta
     4861 aaaacaaggc tcctgtaaca ataccatgtg caaacatata aaatactgct ccactaagtc
     4921 ccaaagcatt aaaagaaaaa atacctaaaa tcataacccc aaggtgagaa atcgaactat
     4981 aagcgatcaa ttcttttaaa tttgaagcac ggtaagcaat tagagcatta taaagtatac
     5041 ttactataca caaagctacc actaaaggca taaaatacac acttgcatca ggaaaaagtg
     5101 gcaagcaaaa gcgtaaaaat ccaaaaggag ccattttaaa tgctacaagc atcatagaaa
     5161 ctaaaatagg cgaatttgca taaacctttg gtgcccaagt atgaaaaggg aaaagcggtg
     5221 ctttaataac aaaggcgata aaaaatgctc caaaaagtaa aatttgttca ttaaaactca
     5281 tagccgaagc attatttttc caaatttcta tatcaaaagt gaaaatattt aaaagtttgt
     5341 aggtcgcata ggcttgataa attaaagcta aaagcattaa aatcgaaccc gcaaaggcat
     5401 aaataaaaaa tttaatccct gctctataat ctttaccata tactcccata atataaagca
     5461 aaggcaaaag tgaaaattcc caaaatacat aaaagagtaa gccatcaagc gaagaaaata
     5521 atcccataat cgcaaattct aaaaagaata tgcaagatac cattgctttt tgctcaatct
     5581 ttaaaaataa aaaacttaaa aatatcatca aggagcttaa aagcattaaa atcaaagcta
     5641 tgctatcagc gcctatatga taactcatga aattgactac cttgaaagga agttgatatt
     5701 caaggtttat tccatttaaa taatcttgcc aaatcttgat atttaaacca agcaccatta
     5761 aactcgctat gacgctaaaa acttttatac ccccacgatt caaaacaaga gttacaaaag
     5821 cggcaattaa aggaaaaaag attagataat ttaacatttt acaccaccca taccaaaata
     5881 agcaaaatca caaatcctgc caccaaaaat ctaagcatta aattaagact attactcata
     5941 attatttttt gcgaaatcaa attacaataa taagcaattt tgtccactat agcatcaaaa
     6001 atataagtgt cacaatgttt taaaactgca cacaagcttt cgtattttga aactataaat
     6061 tcatgataaa acttagggat aaaataatca ttgctcaaaa gtttatggat tttattttgc
     6121 tctatgctat ctttaaacca agaagcctta taggctataa tggctaaaac tacacccaaa
     6181 acagccgcta cgctcgcaca aatcattaca agtttatttt gagcatcgat aaaaatgagt
     6241 tgagtgctaa gatattcgaa aaaactatgc tcaaacaagc ctgcgataat agctaaaacc
     6301 accaaaggac tcatagccaa aagggctatt ttacttgctt catgtggatg tttatcgtgt
     6361 ctagaaggag taaaaaatac caacattaaa agtctaaaac tataaaaagc ggttaaaaag
     6421 gctgaaatta aaagaattaa gaaaattcca tgataatgag cgataaaaga ataacccaaa
     6481 atcaaatctt ttgagaaaaa gcctgctaaa ggataaattc ctgccaaagc caaagaacct
     6541 atagtcataa aaatagcagt gatttttaaa gatttaaaaa gcccacccat ttttttaata
     6601 tctaattgat catccattgc atgcataaca tttccagcgc ctaagaaaag taaagattta
     6661 aaaaaagcat gggttactaa gtgaaataaa gctataccat aagctccaag tcctgcagcc
     6721 acaaacatat atccaagctg cgataaagta gaataagcga taatgcgttt taaatcccta
     6781 gccaccaaag ccatggaagc tgcaaaaata gccacaaatg ctcccaataa agcgataaaa
     6841 taagaaacct caggcactaa agagtaaatt tctcctgcac gaataaccaa ataaaccccc
     6901 gcagttacca tggtagcagc atggattaag gctgaaacag gcgtaggtcc tgccattgca
     6961 tctgcaagcc atgtatgaag aggaaattgc gcggattttc ccatagctcc gataaataaa
     7021 caacttgcaa tcaaaaccaa agcattatga tctaaatttt gtgctatggc aaatacttca
     7081 ttgtatttta aagtgcctgc ttggatataa agccaaaaaa ttcccaaaag catacccaaa
     7141 tccgcaatac gattcataat aaaagcttca ttagctgcaa aagaataggt attgttttta
     7201 taccaaaaac cgatcaaaag ccaagagcaa agccctaccc cttcccagcc tacaaaaagt
     7261 cctaaaaaat tatcactcat cactaaaaaa agcattgaaa atacaaaaag ccctaaataa
     7321 gcaaaaaatt tattaaaatc tttatcatga gccatataaa aaatactata aaaatgcaca
     7381 caagttgcta caacacccac aacactcatc atagtaagag aaatagcgtc tatgttaaat
     7441 ccaaagctta aacctataaa ccactcaaat aaacttacat taaaagcttg attgttaaaa
     7501 agtagataca aagaacaaaa tgcacttata ccaatcaata aagaacatac ataagcgaca
     7561 aaaatttttc tttcacttaa agcaaaacaa cttgcaaata aaaaagctac aaaagggcta
     7621 aaaagagaaa tcaaagctaa attttgcatt atcaaacctc ctcttttagg ctctttaatt
     7681 ctaaagtgcc ttttcttcta taccaaagta cgcaaaatgc tacacccaca gccacttcgc
     7741 aagcagccac acccatcaca aaaagagcaa aaacttgtcc atttaaatcc tgatgcatct
     7801 tagaagctgc aacaagagct aaatttgctg cattgagtaa aatttcactt gaaataaaaa
     7861 gcataatgag attttgtctt tttaaaatac cgattaatcc tacaataaac attgcaatag
     7921 ctataaaaaa atacttttct accattatct ttcctttgta agctctttat gtgtaagcac
     7981 gatcgcacaa attaaagcga ttaaaagcaa aatagctata aattcaaaag ctaaaagata
     8041 ttttgaaaaa atagcaaaag caagttgctt attataatcg aataaatttg gatcgcttaa
     8101 agctaaatca cccgcgatat tttggtgctt aaagcctaaa agcataaaca aaagcaaaac
     8161 agcacttaaa atcactaaaa gaaaaaaact cttcctagct cttaattttt ctttaaattc
     8221 tttggagcta tcaaaaaaca tcatagcaaa gctataaagc ccaagcacag ccccgctata
     8281 aactatgatt tgtatcactc ctaaaaactc tgcatcaagt aaaaaataaa aacccgataa
     8341 aaaaaccatt ccaccggcta aagcagaaag agaataaagc atatttgtac tcaaaaccgc
     8401 tactaagaaa aaacctaaaa ccactacact aaaaaatgta aaagctaaaa tttctatcat
     8461 ttaacttctc cttgtggagc taaatttggc aatgtgcatt cttcatcagt gcataaattt
     8521 ttttctcttt cttgtaaaac ttcataataa tttggagttt ttttcacaag taaatccgca
     8581 tcctttctaa ggctacccgc accctcaaat tcaacttgat ttttaagctt atcaatagga
     8641 gttaaaaaat cttgtttata gccaaaataa gatctttgtt cggctgcatt ttcatactct
     8701 gtgccatgaa ctatagcaag ttcaggacaa acttcagcac aaaaaccaca ataaatacaa
     8761 cgccccaaat taatactata atttcccacc tttttacgag cattttcatc taaagaagtt
     8821 tccatcctga tacaattact gatgcaaatc ttctcacaaa gcccacatcc tatgcatctt
     8881 tcattttcac tttctataaa acgcataaga cggtgtacag cgcggtagcg attgtcaagc
     8941 tttacctttt caaagggata ttttatggtt gcgctattgt ttctttttag catttcacgc
     9001 ataaccaccc acaatcccac aaaaagctct aatttcacac ttctttttaa agcttgtgaa
     9061 atcttctgcc aagtgctagt aggagtcttt cttttttcat caattaaata ataatttttc
     9121 atcacaaact cctatataag tactgcaaag gcagtgatta aaagatttaa aaccgccaaa
     9181 ggaattaaaa ttaaataaca cattctcatc acttgatcag gacgaagttg tggaaaagct
     9241 gctctagccc aaaaatacca aaagaagata aaacttgatt ttactatcat cataatccag
     9301 ccaggtataa aataaaagtc attaaaaccg cctaaaaata aaagcgtaat caaaatcgct
     9361 cctgctatca tagaagcata ttctcctatg aaaaacatac cccatctcaa acccgaatac
     9421 tccgtaccat aacccgcaat gatgtcggct tcattttcag ttaaacaaag tggagttcta
     9481 ttggtttcga taaataaagc aatcacaaaa agtgcaaaag ctaaaggctg tttaaaaata
     9541 agccatgaaa aaaatccatc gctttgataa ttgttaatat ctatcaaaga aaaagatcct
     9601 acaagcatca caatagctat taaagcaagg gctcctacac tctcataaga aatgatagct
     9661 acaagccctc ttgcagcacc tatgattgac catttattgt tacttgcaag gccacctaaa
     9721 aatatagcat aaaaacaaag ccccgaagtt cctataacaa aaagcaaagc cacattaata
     9781 tcagcaatca aaggctgtat agtgcgtcca aataatgtaa attcaggaag cataggaata
     9841 gccgctaaag aaacaaaagc acaaatagct gcaatcaaag gcgctatagc aaaaatcaat
     9901 ttttgtgaat ttgaaggtat gatatcttct ttagtaaaaa gttttatcat atctgctaca
     9961 agctgaataa gtccaaaagg tcctaccata tcaggcccaa tgcgtctttg aaaataagcc
    10021 aaaacctttc tttctgcata agttgcaagt cctgctaagg tagcaaaaat tgcaatcact
    10081 ataatacact taattaaagc ctctaaagca aaaaaagcaa aatcactcat gactcgctcc
    10141 taatttttct aaatttgcca caataaatct ttcatcaaaa aaacttagcg tgtcgatttt
    10201 ttcgtcaaaa taaggtaaaa aagccccatt ttttatgtct ttatctatac gcacgctaag
    10261 acttaattcc ttatctttaa tcttaagttt tacaagatct ttatcttgca agtttttttc
    10321 ttttgccaaa ttctgactca ctcctaaaaa aatcgcttca ttggttgcac ttgcacgatt
    10381 tgaaaatcta ccaaattgat aactaggatt tgcactgtaa agcaaaattt catcttcttg
    10441 taatgttaaa ttttgcaaat ggggagctat aaattcattt ttagcacttt ttttatggca
    10501 ttctaaattt aaatcatatc ctcttttgca ttctccacca ttggtataaa aattatcaag
    10561 actatcaaat tccaaaggag aaaaaccttt atttataggg agtctcttag tataatttat
    10621 agtatattcc tcatcaaaac ctaaagcatt agccaaatca tttaaaaaat atccatcaaa
    10681 ttctaaagct gcattggttg gaactacttt tttatcgtaa tttaaaaaag taccctcttg
    10741 ctgatttaaa ctcgcactag ctaaatttgc atgctcttca taagaaaaac taaaatcacc
    10801 tttttcattg tagcctaaag tcttgccttc ttgcgtgttt ttatccaaat cacaaatcat
    10861 agccacacct aaggtatttg tatgtgtagg atttaaaaag actttaaaag gagttgtatt
    10921 ttggatcaaa gctaataatt tagccaattt tttagcattt ttatgaaaat aaaaatcact
    10981 tcctataatc aaagtaaaat tagccttttt aagcaataaa tcttctaatt tatcctcatc
    11041 tatacccaaa tttttagcaa aaaccgagcg ttttacttct atagtttttt tcactttttt
    11101 aggcacgact tttttcactt ctttagaaat ttcattaccc tcttcatctt tttctacaac
    11161 ttgctctata acttcttcat taatactttc ttctatttct ttattttcat ttacaaaaaa
    11221 ttcagctaaa tttgctttta tattttcatc ttgagtgaat ttttgaagta agaaatataa
    11281 aatttgctcc tcatctccgc ttttgtgagt atgtgaaatg aaatttttag aatactttgc
    11341 aatgcctgca tcttctatag gatgaaaata aagtcccgag cctttattca tcactaaggc
    11401 attgttgatt ttatagctaa gcgtaggcgc atcgtatctt aaaagcgttc ctgcaacgac
    11461 taaaaaatca ctttttgtga tatcttgggt tgtagcatta taaaactcac cgccattact
    11521 tataaattct tccaaaaagt ctttaaattt taaagcttcg ttattgataa gatttaagcc
    11581 gaatttcttt ttgaaatttt gcaaaatcaa agcttcttcg tttgtgataa agctattgaa
    11641 tttaatattt ctaatctcat ttttttcaaa aagttctaca agctctttaa aagctttttc
    11701 atccttactt gcctcatttt gcgtatcaaa agcaaatctt gcagccttat ttaaactcgc
    11761 aaaagcaaaa tcattgctta cgcgataaat tttagctttt tgattgctaa taccgctttg
    11821 tttgacatca taatacataa gctcacaatc acttgaatgc ggatttgaag caggaattct
    11881 ttttaactcc caaatattag aagtatattg gaatttagaa cctatcaaag cccctgttgg
    11941 acatacacta gtgcactctc cacaaaaaga acaatcaagc atatctccat ttgcagggcc
    12001 tatcaaactc ttttgaaatt tcgtccaaat cgcataagcg tctttaccca tactttcttt
    12061 aaagctatta tctacactat cacctccgcg aggcactgtt tttaaagcac tttcgccgat
    12121 tttatcctta caaactgtga tacaacgctc acacactata caaagtgcag gatcgtaatt
    12181 aatcattccc caatgtttat gcggtttatg tgtgtcttta atccaatgtc tttggatatt
    12241 tacacggctt ttatgagtga aattttgcaa ttcacactcg cctgatttat cgcaaactcc
    12301 gcattctaaa ggatggttga tacaataagc ttgcatgatc tcatttcttt catcccaaag
    12361 attttgtaaa tcactttcta caaccatacc ctcttttgct ttagtattgc aagaatacac
    12421 ttttttacca tcagcctcta ccatacacat acgacaagcc aaagtcgggc tacagcctga
    12481 aagatagcaa attgctggga taaaaatatc atttcttctt gctatattta aaatatattc
    12541 gccttcttca aaggcgcaat ctatgccatt tattttaatt gtcattttgc ttcctttatg
    12601 cgaattggag taaaatcaaa accttgttga tcataattta aaaaggctat agtgccttgc
    12661 aaattttcat ccaaacaaag tgtggtttta agactaaaat ccttagccaa aacttcgact
    12721 tcacttttat ctttgcattt tgcaatttgt aaaaactgct tagaacaatg caaattatca
    12781 tcctttaaat ttgctctaaa aagcaccaaa ccatcatagc tatcgagctc ttttaaagta
    12841 ctcaattttg catttttaaa atcacattct ttttcattac tgtctaaaat tttaagtttg
    12901 tatttttggc ttagaaaatt tagaaaatat ttaatatttt cactatcttt gtaagaatta
    12961 atattttcat ctacaattaa gtattttgca ttttctaaaa aatctaaaat ttcactcgcc
    13021 tcttcttcac caagacaaga ttctgcactc aaatatccct catctaagtc ttgaaaatta
    13081 tccatttcgc tcatcttaca aagcaaagct aaaacataac tcaaacttgc aatttcacat
    13141 ttataaaatt tcgcatttaa attcttatct tcaaggcaag aaatataaat attttcacct
    13201 tgaatttttt cacataaaat tttattttta agacttagca tatccacaaa acaaagcgct
    13261 ctttcataac tcatacgctt tcctttttaa tcactatagt ccaatccact tgattaaatt
    13321 tcaaggaatt taaaagctca cagccttgtt cttttacaaa agaaaaactt ttttcaacag
    13381 gagaaaaatc gccgatttca aaaagcacca ctaaaacctc accttgtttt gcttctttta
    13441 tgatttgtgc taaatcttca aaaagctctt tgctttttct taaatctact cttctcatcg
    13501 atctatctca cctaaaacta tatttacatt tcccataatg gccacaacat cagccaaata
    13561 agtccccaca agcatttctt caaaaaacgc acaatgccaa taactaggcg ttctagcctt
    13621 taaacgataa ggtcttcctg taccatcact atggataaaa aagccaagct cacccttagg
    13681 actttcagta ggcacataaa cttcgccttt agggggtttt aaaccttgag tgattaaaac
    13741 aaaatgctgc attaaagaat aattctgcgt taaaatttgt tcctttgaag cacttacata
    13801 ctcaggatgc gtagctaaaa tttcaggtgg agtatctttg taaagcgcgg cacattgtct
    13861 aagtatttta agactttcgc gaaattcttg catataaact ttatatctag cataagaatc
    13921 tccttgcgtt gcataaggca cgccaaagtc tatttcatta taaagcaaat aaggctcttc
    13981 cttgcgtata tcatatctta cgccacttcc tcttaacatc acccctgtac agccccaatt
    14041 cattgcttgt tctttgctta caacacctac attttcagtt cttaggcgcc aaattctatt
    14101 atcatctaat aaagcttcat aatcagcgat atctttagga aatttatcgc aaaatgccaa
    14161 aagctcattt aaaaaacctt caggcaaatc aagcataact ccacctattc tcatagaaga
    14221 atgtgtaagt cttgctccac aatatttttc tatcaaatcc aaaacatact cgcgttctct
    14281 aaagcaatac aaaaatacac tcatcgcccc aatatcaagt gcgtgagttg caagccaaag
    14341 caaatgcgat gcgatgcgat taagctctaa aagtatcatt cttatcactg ctgcacggcg
    14401 tggaatttct aagccgcaaa gcttttcaac agctgcacaa taagcataat tattagccga
    14461 cgcagcgata taatccatcc tatcagttgt cgggataaac tcttgatata tcatattttc
    14521 agccattttt tccataccac gatgcatata gcctatggta gggcgcgctt ttacaacctg
    14581 ctctccatca agttctaaaa taaggcgtaa atttccatgt gctgaagggt gctgtggccc
    14641 taaattaata atcatttttg agtcttcttg ctcaaaagct atattttcat aataaggttt
    14701 taacttgcta ggaatttgca ttttaacgcc ttttctctaa aatttttgct tcgtcgcgtt
    14761 tgactttttt tacaaaagca acgcctccat cttcttgata ctcttgttta aaagatacct
    14821 cttttctaga tccacctttt ggtacttcat gatacaatct tgcaaaattg agtgtatctt
    14881 tatcatctgc aaaacctgga tctctttgct caactcctac gacttcgcga tattctttac
    14941 caaaaatttt atcgatctca taccactgcg caaattcatc tccttgcaaa ggataggttt
    15001 ttaaaagagg atgtccatac caatcatcag gcattaaaat acgctttaaa ttaggatgat
    15061 ttatgataaa aattccaaac atatcataaa tttctctttc gctccaattt gcgcccttaa
    15121 aaacatgtgc tacgctttgc aagcgttctt ttacacccac aaaagttcta acacgcactc
    15181 ttaatctttt ttctaaattt aaaagctggt aaaatacttc aaaaccattt ttatcagcta
    15241 caaaatcaat agcacttgct tctgtaaaat ttaaatatcc taaggtatga agcatttgca
    15301 gggttttaac attgtcttct tttttgattt ctatcaccca aaaatcaagt tctataaaag
    15361 aatttataat atcaacttct gtttttaaaa cctcataatc ttgcttaaat gcactctcat
    15421 tgacatccaa tttttgagta tggggtgcat gataaaacct atctttataa taattttgaa
    15481 gctgggcatt ttttttatcg ctatattttc tcatcacacc aacctttttg gagctatttt
    15541 gcgactagct ttttcttttc gaattttttt ctgtaaaatc atcaaggcaa actgaaagct
    15601 ttcagggcgt ggggcacagc ctggtacata aatatcaact ggaatgatcc tatctacacc
    15661 ttgaacggta gaataagtat taaacatacc ccctgtattt gcacaacttc ccatagaaat
    15721 cacccattta ggatcgggca tttgatcata tagccttctt gtaaattcag cgtgcttctt
    15781 acataaagtc cctgcgataa tcatcacttc actatggcgt ggagaagctc taaaaatcgt
    15841 tccaaatcta tcaaaatcat atcttgatcc ccctgctgcc atcatctcga tcgcgcaaca
    15901 ggcgagtccg taggataaag cccacaaaga attacttctc ccccattgaa caagcttatc
    15961 tacgcttgtt aaaaccactg gcaaaccact ggcataattt acttgatgct ctgccatgca
    16021 aacgctcctt ttttataggc atataaaaat ccaactccta aaagtaaaat aaaaacaaat
    16081 acttctaaaa gcccaaacca tcctaaatct ttaaaaatca aagcccaagg aaataaaaac
    16141 accacttcta tatctaaaag aataaaaatc aaagctacga tgaagaattg ggaattaatc
    16201 ttattagctt gttttaccgg aattggacca cattcataaa ttccaagtcc tagtttttta
    16261 cgattttttg cagcaaaatt attgccaatt ttagaagcta aaaaaaccaa tccaaaaaaa
    16321 ataacactag ctagcactaa cattaaaaat ataccgaaat aaggatgcga agcatcaatg
    16381 tgggacattt ttttctcctt tttttaaaca ctttgaatca cttcacaaca aaaaataaaa
    16441 tttacacact ttgttctatt ttactctaaa ctttctatat tgaaacttaa taagaataaa
    16501 tattgtttaa agtttcattt ttttacactt aaagttaaca aaaaacccat cttgatgagt
    16561 gataaaaata taagaaatca aattttcttg ctgataatgg tataaaaatt ttaagatttc
    16621 ttttgaattt ttcatatcaa gactagaagt aatttcatct aaaataagca cttttggctc
    16681 taagatcaaa gcgcggataa gtcccacgcg agtggcttct cctccactta actcataggg
    16741 tttttgctct aaaatttgtt tttttaagtt aaagcgatca aaaaattcta aaatcttttc
    16801 ttgctctttt tttatattga aattttctag accatcttgg ataagatttt tgattttttt
    16861 ataggggttt aaggctgctt tttgatcctg aaaacaatac tgaatttctt ttcttaaaag
    16921 tctttgtttt gttttatcaa gactatgagg atttaaattt ttatatataa tttctccaaa
    16981 acttggattt tctaaaaaac aaagtattct agctaaagtg ctttttcctg cgccactttg
    17041 ccctaaaatc atcaaatttt cattctcttt taaagaaaaa ttgatatttt caaaaatcaa
    17101 atgtttttct tttttcaaat accaatgctt tttaaactca taaaatttac ctaaattttt
    17161 aacttcaagc atgataaatc cttaaaaatt catccactct aaaaagttgc gcttgatttt
    17221 tttctaaaaa aagcacctca tctgctaaag aattgactaa atttaaatca tgtgtgatac
    17281 aaactaagcc taaagtattt tttaattttt ttaatatttg aatgattttt tgcacatttt
    17341 ctttatctaa agaagctgta atctcatcgc aaattaaaat ttgaggcttg cttaataaag
    17401 ctagagctaa actcactctt cttgccatac ccaaacttaa ttcatttgca taagaatgcc
    17461 acaataaatc tacatcatca aagcctaatt tttcaagcaa atcaaaagca tatcttttac
    17521 ggtccttttg atttaatttt gtatgagttt ttaaaataag atgaaataaa tttcctatat
    17581 tcaaatacgg ataaagacta agctctgcat cttgtaaaac aagtccgact ttagaacgaa
    17641 atgcacgaag ttcgttttga tttaaattga aaacagaaac ttcattaaag ctccattcat
    17701 ctgcgttgat ttcaaattta ggatcaagca gtctgattaa ggattttccc aaaagacttt
    17761 ttccaacccc actctcaccc acaatcatca aactcttagc tattttaata tcaaaactta
    17821 tattttcaaa gatctttttt tgatttaatt ttaagcttaa atttcttacc ttcaagatct
    17881 tactccaccg attttttgca aataatttcc aagccataaa aggggtaaga ataaaaacat
    17941 aagagctaaa agtggaaaca gtatcatcca ccaagcgcct ataaaaatag cttttgaaga
    18001 ttcgtttaac aaggttccta aagtcggtat attaaaacca agacctaagc caaaaaaact
    18061 caaagtcgct tcagtagcta tggcatgaat gatattaaat ataaaaagaa caaatattaa
    18121 agattttaaa gctggcaata aatccttaaa aaaagctcta aatttagtcc ttcctaacac
    18181 tatacttgct ttataaaagt ctaaattttc tagtcttttt aactcgcttt ctacaatcct
    18241 tgctataaaa ggccaatgca ctaaagcgat taaaaaaatc attaaaaata tatttacacc
    18301 cacaaaactt tgaaaaaaca tcatcaacaa aaaagcaggc aaagctaaaa aaagatctaa
    18361 aattcgcatc caaaaagtat aaaaaaaaca tcttgctaaa aataaataaa aaagagcaaa
    18421 aaatatagac aaaaaagaac tacaaattcc tataaataaa gaaattctca aagcaaaaag
    18481 caaacgcgaa aatacatctc tacctaaaaa atcagtccct agataataag tcaaattagg
    18541 agcttggtgc aaatgattta aatgactttc taaaacatca aaaggagcca gtaaaggcgc
    18601 aaacaaagca cttaaaatca aaaacattaa aggcgtaaga aaaagtatta tcttaaacaa
    18661 atttcaacct ttttaatctt ggatttaaaa tccaagcaaa aacatcactt aaaaatgtaa
    18721 aaaaagcagc aagtaaaaca ctaaaaaata tcaaagccaa agccatagga aaatccttaa
    18781 aaagaatgct ttcaaaaagc aaactcccaa gcccctcata agcaaaaaca ctctcaacca
    18841 cataagttcc catcataaaa cttaaagcac tgcctccaaa ataagctata atagggctta
    18901 aagaatatct taaaaccaaa aaataaatat ctttttccct taaggctcta gcgtataaat
    18961 tttgaacaaa aatttgtgaa aaagtttcat tgataaaatt tctagctatg cgtaaaaaca
    19021 aagctaaatg agataaaaca agcactaaaa caggcaaaat aagatgtttt aagcggttaa
    19081 aaaaatcatc ttcaaagcct atatcactag tccctgttat aggcaaaacc tgccaaaaaa
    19141 ttccaaaaat caaaacaaaa aataaagcca aaacaaaagg cggtaaagca aaaaagttaa
    19201 aggctagaaa agtgatcaat ttatctataa aactttcttt ataataatgc cccaaaagag
    19261 caagaaaaac actgagtaaa aacaaaagca ctaaggcgct taggcttaaa atcaaggtat
    19321 ttgccatcct ttctttaatg agctttaaaa cactttcccc acttaaaaaa gaaacactta
    19381 aatccccttt taaagcctta aaaagccaaa tttgatactg ccctagcaag ggcttatcca
    19441 gccctaaatt ggcttctatt ctttgaacca attccttgct ttgagaattg actttatttg
    19501 catacgctac actaccttta ctaaaataaa gcaaaacaaa gcataaaaaa gtgctaaaaa
    19561 atgcgataaa aatactaaaa actaagcgtt ttagcactta ttttttactc cactcataaa
    19621 tattccaagt aaaacctact ccatgatggc ctaaatttct tgctttaaca ccctcaagtt
    19681 tagcattata aactaaggca aaatcaagat aagttagaaa aataaaagga ggattttcat
    19741 acaaagcatc aataaattct ttataatact ttttgcgttc ttccaaattt aaagtatttc
    19801 tagctttttg caaggctata tccacttttt tatcatgata atgtccaaaa ttccaaccct
    19861 catcatttaa agcactatct tgcgaacttt caaataccct aaaagtgtga aaatcaggat
    19921 ctaaaggact tccccaaccc actaaaaaac tatctacttt agaataatca aaactgcccg
    19981 caggctttgc tacaacctta gctataaccc ctattttttt aaactcgctt tgcaaaattc
    20041 ctgccaaact cacccttaga ggatcattac tcatagtcca aatttcaaag tctaaaatct
    20101 tgccatcttt ttcaaaaata ccctcatcgt ttttcttaaa acctaaagcc aaaatcaaat
    20161 cttgggcttt tttaggattg tattcataag ttttaaaagc tttagaatcc gcccaagaac
    20221 gctctaaagg atgattggct acaaaaccat aatcatgcaa aagatttttg actatacttt
    20281 gcttatcaac agcataattt aaagcctttc ttatttgaat atcttttaaa aattcattct
    20341 ctaaattaaa cattaaagct ctataatcag cagatctttc acgcaaaatt ttaaaatttt
    20401 catccttttt aaaaatattc aataaagaaa catcaatcaa agccgcatca attttgccat
    20461 ttttaagctc tacgcttgca accgaaggat caaaaatatg tttgatgata agtcttgggg
    20521 tttttacttt tgtaagataa aaattctcat tagctttaaa ctctacatat tcgccctttt
    20581 tccattttac aaatttataa ggacctgtgc ctatgggatt ttgattaaaa gaagcagtat
    20641 ttaagtcttt atcactaagt aaatgtttag gaagcattcc tatacttaaa gcatctaaaa
    20701 atgcaggaaa aggtttagaa agcgtgattt taagatgata aggatttaaa atttctatac
    20761 ttttaatatc ttcaaaattc acataaactg aagaattatt tttaggattt ttaaaagctt
    20821 caagactgaa tttaacatca tcggcactaa atttcactcc atcgtgccac aaaacatctt
    20881 cacgcaaaaa gatatcatag ctaagtccat ccttgctaac attccacgac gcagctaaat
    20941 caggctttaa gctcatatgc tcatcaaaac gcgtaagtcc tgaaaataca agattaatca
    21001 ccgcatcatg atcttcgcta tatgcaggat ttatccttga aatttcattt tccacagcta
    21061 cgattaaagt atcttttgga attttagcct caacattgaa aaacaataaa aatagtaaaa
    21121 taaaccatct aagcacttgt aactcctcaa atttaaaatt aaaaaaatta taaaataaaa
    21181 aataagaagc cacaagccct atagggggat aatttgcttt aaattatgga ttttatttat
    21241 caattaaatt gcttctcact acattcatcc aataaatacg ctatatgctg ccaagatata
    21301 cccgtagcat cgcttaatcc tatctcgcaa gtgcttgatg tactaaaccc gcgcttaata
    21361 tttgttttgg cataaaattt tttaaagccc tttgtagcat taatatttaa ttgaggcttg
    21421 aaaaagccct tgtatccagc aaacccgcaa caataggtat cattatctat taatactttt
    21481 ccattcgtgc atagctttgc aagcttgatt atattttcat ttaaaccaag ctttctagca
    21541 gcacacatga tatataatcc tacattctca ttgattttat caatgcgtaa cttaggagca
    21601 ataaatttta ataaatactc gcttaaatca taaatttcat actttgaatg atcgctaatt
    21661 aacttagcac tacaagcact atgatctaac actatgggcg agtctatatt gcttaaaaaa
    21721 tcattgattt tttgtatatt tttatcttgg atatcttgaa aattctcata agccttacca
    21781 caacataaat cattgggtgc ataaataatg cctatatttg cttttttaca caagctctca
    21841 aatacttctt gcaaacttct tttatcatgc attttttcat ttggtttaaa gcttttatta
    21901 agacagcttg taaaataaac cacattataa gctcttttac gactttttaa ctcataatca
    21961 ttcaccttag gcaaatacgc cctagttctt ggtataatgc taagaaaatt gcttgctttt
    22021 tcgagcttat tatcaagact taaattatca aatttatttg cgatacttaa tgaaaattta
    22081 gcaattttta gagttttttc atgattttta tatgctagat ttcctaaaat tttagatata
    22141 aatcctatat tattttttct atattttaat gaaaaatcag caaaattaat ccccaaagga
    22201 catgaaaaag agcacacccc acaagcagca caagagctgt ctactaaatg attgtaatat
    22261 tttttaatat cctttaattt tgcttttgac tcatcatcat ttaagctttc aaggcgtttg
    22321 atctctcgta agatcgcaat tctttgtctt ggagtaattg tatattcatt tgatggacaa
    22381 aatctttcgc aaaatccaca ttccatacag gtatttaatt tctcatcaat ccaactggct
    22441 tgtttgatat ttttcttata aatatcttta tcatcgctaa tgattacatc gggattaaat
    22501 aaattatcct tatcaaagat acttttgatt tttttattaa tcaaataagc ttgcttaccc
    22561 cactctacct ccacaaaagg tgccaccata cgccctgtgc cgtgttcagc ttttatactt
    22621 ccaccataag aagctactat attagacatt tctttaacta gatttgaaaa attatcaaat
    22681 tcaagcttat tgtttaaatc cggtgtgata ataaaatgga tattgcctgc taatgcatgg
    22741 ccaaaaatga ttccattatc actaaaacca tatttataaa acaattcttg aatgctttta
    22801 attccatcag ctaaatcctc gatattaaaa cacacatctt cagtaattac cgttgagcct
    22861 gcctttctaa gactagctgc tataggcaag agtgcttttc taatcttcca ccataaatca
    22921 tattcggcct tattcttact aaaatatgac ttataagcta gtttggaaat ttcttttatt
    22981 ttatttatat tttcatcaac cttaagctca ttactatgct cactttggat caatacacaa
    23041 gtattaccct ctttaatatc agctaaaata tctcttaact catcataatt tgatgcagct
    23101 tttaaacttg catagtccat tatttcagca gaacttataa aatcaacttt agcaaattct
    23161 tttatagtgt ttgcagcatt attgatatta tcaaaaaaca ataaagcaca ggccttaaat
    23221 tccaaatcat ccaaaacagc aagcttaact tcgcttacaa atcccaaagt cccttcagag
    23281 ccaataagca agtgtgctaa aatatctatt tcatcatcat aatcaacaaa ggcattaagg
    23341 ctataacctg tggtgttttt gattttaaat tttttgatta ttaaatcttt taattcttta
    23401 ttggcattaa tctcttcttt gatctctcta agttcattaa ttaatttttt attttcatct
    23461 ttaaatcgag ccacacttaa agcatcgctg gtatcaagca tactaccatt tgccaaaatc
    23521 accctaatac ttcttaaggt tttatagcta ttatccttag ttccacagca cattccgctt
    23581 gagttgttat ttataatccc tccaattaaa gctgaattta tagtagctgg atcaggtcct
    23641 atttttttct tcaaaaaagc aagactttca ttagcatgaa tgcctactac accacatcct
    23701 aaagtaattt cgctagcgtc tttgttaatt tttatttttt taaaggcaaa tttaatcact
    23761 acaagcactc catcgcaaga gctttgtcca cttaaacttg tacctgctgc tctaaatgtt
    23821 ataggagttt tataggtatt tgctaattga ataatttgct taatttcatc ttcattttta
    23881 gcaataatca ctatttttgg aatataaaaa taacatgacg catcaatgcc ataagcataa
    23941 catctagcat aatcattaaa gattctatcc ttaaaaatat acttagcctc attataaaaa
    24001 gc
//
LOCUS       DAQUWA010000022        23846 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.022, whole genome shotgun sequence.
ACCESSION   DAQUWA010000022 DAQUWA010000000
VERSION     DAQUWA010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23846
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.022"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            240..590
                     /locus_tag="R8X70_000744"
                     /pseudo
     CDS             240..590
                     /locus_tag="R8X70_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818344.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,3-sialyltransferase"
     gene            626..2653
                     /locus_tag="R8X70_000745"
     CDS             626..2653
                     /locus_tag="R8X70_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004289220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEF2928543.1"
                     /translation="MKFHTTSKKLIKNVKDFYNIVLYKAYKSIGKEDVFVGWGRKNSG
                     LKAIALAKKHHAKFILLEDGFLRSLNLGVENSPSFSTVKDDVGIYYDASTPSRLENIL
                     NTYEFSPKELALAKKAIELIKKEKLSKYNNTLCIPQELFSANEERVLIITQVANDTSL
                     RFGLASDFSTQDIINDALKENPNAKIYIKIHPDVLSGKKQSDFSMQDLPSRCVILKEN
                     YNPIELLSHFKKVYTKTSGMGFEALMLGCKCVCYGMPFYAGWGLTQDKLECKRRIKKR
                     SLEEVFCAAYILYSEYFNPYLNQKSDIFDTIFTLARYKKIEQVNSHTLYFLGFTLWKR
                     WFMKPFFKAKNNKIIFLNSLDELYKANLNSEDKIFIWGKKYDKALLAKDFNNEIFLVE
                     DGFLRSVFLGSDLTRPFSLIVDSKGLYVDPNHPSDLEELLQNHEFDDTLRQRAKKLIT
                     TITQNKFSKYNGLKHEKLDFNTNKKIILIPAQVEDDASMILGGADFDTLKLLQSVRAA
                     NKDAFVVFKPHPDVLSGNRKGLKDKDIILKYCDEIIENVSIDSAINACDEVHTITSTS
                     GFDALLRAKKVVVYGKPFYAGWGLTQDLHRISRRTRVLSLEELVAGVLILYPRYIHPK
                     SKNLCEVELALDIMLALQRDYFSKRWLKILIDFRIFMLRKIRRICEFFIKR"
     gene            2650..3831
                     /locus_tag="R8X70_000746"
     CDS             2650..3831
                     /locus_tag="R8X70_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEF2928544.1"
                     /translation="MKFSDKIKKEFSGKNVLLLQGPVGTFFHRLAIKMKKNKAKVLKL
                     NFNGGDFFFYPSGKRCKCDEKDLENFYENFFKEKKIDAIVMYNDCRLIHAKAIKVARK
                     LGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
                     MAFSAFLYWLFSFLLAPFFNNKLHHRTLFPFEFLFWFRSLYRKYLYKLTEKKLNQKIY
                     SLEKKYFLAILQVYNDTQIKHHYKKSIEEFIEETILSFANHARAKSYLVFKHHPMDRG
                     YRNYSKLIDELCQKYHVEGRIFYVHDTYLPTLLKNALGCITINSTVGLSAILEGCPTK
                     VCGNAFYNFEGLAYPKKLQFFWREAHAYKPNPSLVINFKNYLLNTNQFNGNFYKNSFL
                     G"
     gene            3900..5021
                     /locus_tag="R8X70_000747"
     CDS             3900..5021
                     /locus_tag="R8X70_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HEF2928545.1"
                     /translation="MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHRFDFKAEISGIE
                     KNENFPSFKIDCKDVQTRYHFLTWNDIVKKNWSQSYKDALLDCYSFFRIYTITGLFLK
                     FGKESIYQLITGYYPFFYVVFSLLLSLCLALGSFVFLQNHIPYFLAIIIGIFLGFLLN
                     HFLFKLGRKLAVFWIARICAFCATWKEKRLGAMEQRIKLFADEILKSLKQNENKQDYE
                     LILVAHSVGTIVCIEVLECILKQNLDKAVLDKLKILTLGECIPLTSYQKNADDFRKKL
                     EFVSTFDLKWYDYTSIIDGACFPQVDFFRTSGVQANFTPPFLSAKFHTLYEQNEYKKI
                     KRDKNKAHFLYLYSPHIKGSYDFFAFIVAPKFLEEKVKI"
     gene            5018..6388
                     /locus_tag="R8X70_000748"
     CDS             5018..6388
                     /locus_tag="R8X70_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEF2928546.1"
                     /translation="MSQCPFFPKPYKNKASMLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVKEFPKSAFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRISKVFNLMSEAVEDMMKRFEKYSNGSIIEVDEAMTFITADVIFRTIMS
                     SKLDEEQGKKILDAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQVLS
                     DIIKPRYDAVNSEKAQSFEDILGSLLLVVDAQTNQRFSFEEILDQVAMLFLAGHETTA
                     SSLTWTLYLLSLYPDEQEKAYKEIIQVLQGENIQISHLRQFKYLTNIFKESLRLYPPV
                     GFFAREAKKDTKVRDKMIKKGSGVVIAPWLIHRHEGFWAGPHEFRPSRFESEYKKDAY
                     LPFGAGERICIGQGFAMQEAILILASILRKYKLELEEGFIPDVVGRLTVRSANGMNIK
                     FIKRES"
     gene            6385..6807
                     /locus_tag="R8X70_000749"
     CDS             6385..6807
                     /locus_tag="R8X70_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928547.1"
                     /translation="MKRVRARIRANFRNRIKRNLKGSLKEKLAGTILLCAIVPLAICG
                     YLLIVIVGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWAKVVI
                     KITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGKR"
     gene            complement(6810..7157)
                     /locus_tag="R8X70_000750"
     CDS             complement(6810..7157)
                     /locus_tag="R8X70_000750"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEF2928548.1"
                     /translation="MRIGCDIVAISRIDTIYQKHGNAFLDKFLNQNEQKLIKSSSTLA
                     GFWAAKEAASKALGVGISKECGFLDIEISKDSKNAPHLKLASHVLEKFKINSTSLSIS
                     HDNGFAIAVVALD"
     gene            complement(7157..7693)
                     /gene="fliL"
                     /locus_tag="R8X70_000751"
     CDS             complement(7157..7693)
                     /gene="fliL"
                     /locus_tag="R8X70_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HEF2928549.1"
                     /translation="MDEELENNEEKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKAAPKEEAKTDKAKVTAPAQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNTELLKPELDKKVAVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNVYFTDFVVS"
     gene            7806..9170
                     /locus_tag="R8X70_000752"
     CDS             7806..9170
                     /locus_tag="R8X70_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEF2928550.1"
                     /translation="MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLAKGCKNVS
                     VGYDARYSADELYRYLVSGLNKAGIQVYNIGLVPTPLGYFSLYEGMKFDANIMITGSH
                     NPKDYNGFKITIGKESFFGAELKEFSKEVYKHLEDEIEENLEAQKYDILSLYVNFMCE
                     QFNFLKDFNYKFAIDCSNGAAGVVIKPLVKALNLKAHVMFSNPDGQFPNHEPDPTEEK
                     NLHAIKNFLNENQEYPLAFAFDGDADRMVALSKTHIFCGDELCYLFAKNIPNPRILGE
                     VKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDG
                     IYAFLRALELVYKGYDLESMISALPKLYTTPEIKIPVSEEEKFKLVDEFKKAIEKGAL
                     EGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEASSLEQAKELEAKVFKLFNDI
                     KESV"
     gene            complement(9800..10126)
                     /gene="rsfS"
                     /locus_tag="R8X70_000753"
     CDS             complement(9800..10126)
                     /gene="rsfS"
                     /locus_tag="R8X70_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEF2928551.1"
                     /translation="MQERVDLIVKILDEKKAEDIKTFDMSEQDYFVKYVIIAATLGEK
                     HALSLIDELKTKLKAKGEEFLNIESSEEWSVIDLGDILIHLLTPEHRGIYNIEELLES
                     LKKNKA"
     gene            complement(10156..10701)
                     /gene="nadD"
                     /locus_tag="R8X70_000754"
     CDS             complement(10156..10701)
                     /gene="nadD"
                     /locus_tag="R8X70_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEF2928552.1"
                     /translation="MKIALFGGSFDPPHKGHDAIIKEALAKLDIDKLIIVPTFINPFK
                     KGFFADEKQRFAWVNKLWGNLEKVEICDFEIKQKRPVPSIESVEYLYKIYHPSKFYLL
                     IGADHLEKLHLWHDFERLNSLVEFIIANRNDIEIPKNFKDLKTNIKIASSFIRSTLDT
                     HEVCDEIKNEVKNYYEKLQKN"
     gene            10763..11761
                     /gene="gap"
                     /locus_tag="R8X70_000755"
     CDS             10763..11761
                     /gene="gap"
                     /locus_tag="R8X70_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEF2928553.1"
                     /translation="MAVKVAINGFGRIGRCVARIISKRDDIELVAINDTTDIELTKYL
                     FKYDTVHGEFEGSVENEGDDLIINGKKIKVFKSRDIKELDFAKYGAQIVLECTGAHLT
                     IEKCQGFLDMGVQKVIMSAPAKDDTPTYVLGVNSQNYKGENIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKTKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSKKVSKEELNEAFRKAAATNLKGILMVDDD
                     ERVSSDFITCSYGAVVVSDLTQVIADDFVKVVAWYDNEWGYSSRLVDMAVYIANKA"
     gene            11764..12966
                     /locus_tag="R8X70_000756"
     CDS             11764..12966
                     /locus_tag="R8X70_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEF2928554.1"
                     /translation="MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVSKRLARLLDKEIVMAKDVIGEDAKS
                     KAANLKASEILMLENLRFEKGETKNDENLAKELASMAEVYINDAFGVCHRAHASVEAI
                     TKFFDENHKGAGFLLQKEIEFAENLIKRPARPFVAVVGGSKVSGKLQALTNLLPKVDK
                     LIIGGGMAFTFLKAQGFDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQESPMKFVPSQEIPSGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHAISDGHATTVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     VLRSGGVQ"
     gene            12963..13634
                     /locus_tag="R8X70_000757"
     CDS             12963..13634
                     /locus_tag="R8X70_000757"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEF2928555.1"
                     /translation="MIFAANLKCNHTRSSFKIYANILNQYLEAKNDDIIVFPPSIAFL
                     ENELNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDENLIKAKF
                     DFAKEHAYKIVFCIGEDLKLKNSNQTLDFLKKQLEVIDLDYKNLIIAYEPIYSIGSGV
                     SAKKEDIAKVLEFLSSLTQAPLLYGGSVNEDNIKDILNIKHCSGVLIGSAALKAENFI
                     KLIKG"
     gene            13638..14465
                     /gene="fabI"
                     /locus_tag="R8X70_000758"
     CDS             13638..14465
                     /gene="fabI"
                     /locus_tag="R8X70_000758"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEF2928556.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACYEQGASLAFTFLNDALK
                     KRVEPIAEEFGSNFVYELDVNNSDHLDSIAEKIKKDLGEIDFIVHAVAYAPKEALENS
                     FLETSKEAFDIAMGTSVYSLLSLTRAVLPVLKEKGAILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGIKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINAPLKRNV
                     SIEDVGNSAMYLLSDLARGVTGEVHYVDAGYNIMGMGDVTKDENGNTVLCWDNQKGQ"
     gene            14465..15964
                     /locus_tag="R8X70_000759"
     CDS             14465..15964
                     /locus_tag="R8X70_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HEF2928557.1"
                     /translation="MAKLSNEELKDILIKRIEKIENSDLVDKKTINEESVKALAKHLS
                     LGNEIPALAQKFFELAPKTKVVWLHLCECTGCSESLLRADLPSFDELVFDFFSLEYHE
                     TLMAANGTKAEELLEHVLKEDFVLAVEGGVAAIDTFFLTIGAEGESGYEILEKLAAKA
                     KAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLTQKVVNIPGCPPSDVNIIATLAYFAL
                     FGILPELDEQNRPVWAYGKCLHDLCERKAKFESGIFAEHFDDEKAKSGACLFKIGCKG
                     PYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANPFSYAKLVNQE
                     FSTEFALEEQIQILSSMDFEFESNLKLILQNIAKNKLGALLVENYKTSFEKNFIFIEQ
                     NFDENSMPSSDIWKYFEINLILAKGEFLQDKNDFLKAAQNYSFKHASPYDFKLTLNEK
                     SKLDVSKSFRMPLIYLCGGLDFEALAYSVLKAFEKNIKSVIDFNKQKAG"
     gene            complement(15961..17795)
                     /gene="feoB"
                     /locus_tag="R8X70_000760"
                     /pseudo
     CDS             complement(15961..17795)
                     /gene="feoB"
                     /locus_tag="R8X70_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344781.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
     gene            complement(17792..18016)
                     /locus_tag="R8X70_000761"
     CDS             complement(17792..18016)
                     /locus_tag="R8X70_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HEF2928558.1"
                     /translation="MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSS
                     LKNATIMVELDTSCVILRSDEAKTIEVNLI"
     gene            complement(18098..19438)
                     /locus_tag="R8X70_000762"
     CDS             complement(18098..19438)
                     /locus_tag="R8X70_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEF2928559.1"
                     /translation="MLYSEILADFIFNLKYENIPNTVVQRAKELMLDSLGTAIAASKE
                     ECVLNAFKAFENLSTEKNTLIWVNDQKLDPIYAAMLDGIASHALDFDDTHTEAILHAS
                     AILTPLCLSYGFHVSKDAKKIIKAFIVGWEIAARVGIASKGTFHKRGFHTTAIAGIFG
                     SVSASAILLDLNKEQIINALGLAGSFASGINEFLSNGSNSKVLHIANAIKNGIIVAHF
                     AKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELNKALGEIWQTMQVSIKPYPSCHFAH
                     GLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLM
                     ALGFFDGKITLESYENLKREEVLEFAKKIRYEKRKSQGFPKYFPGHLEASLQDGRTIQ
                     KDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF"
     gene            complement(19447..20815)
                     /locus_tag="R8X70_000763"
                     /pseudo
     CDS             complement(19447..20815)
                     /locus_tag="R8X70_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
     gene            complement(20817..21989)
                     /locus_tag="R8X70_000764"
     CDS             complement(20817..21989)
                     /locus_tag="R8X70_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEF2928560.1"
                     /translation="MNSKTKLIHCGRGDQNVEVRSVNPTLMRASTILFKDHATWQKYR
                     ELRKTDRVLSYGARGTTTNFELEKLICSLEGGYRAQLFPTGLAALAMVLLNYASKDAH
                     FLITDAIYGPVRTICELFLEKMGVEIDFLKADASDVEEKIKPNTKLILCESPGSILYE
                     IIDLPKLCKIAHSHNIPVAIDNTYSSGYFLNPLELGVDISVIAATKYLSGHSDVTMGV
                     VVINEKEWKNFDKLPEALGFTTSPDDAYLVLRGMRTLDVRMKAHEKSADEIVEFLQTR
                     KEIKTIFYPKLKTHPNHEIFMRDHKGANGMVTIEFAEGYSKEDAIKFVDKLEYFSIGA
                     SWGGYESLATVTTPPRTATDWSKRGPFVRFHIGLEDTKDLIADLTKAFDSIKKIRK"
     gene            complement(22001..23439)
                     /gene="dcuC"
                     /locus_tag="R8X70_000765"
                     /pseudo
     CDS             complement(22001..23439)
                     /gene="dcuC"
                     /locus_tag="R8X70_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
     gene            complement(23443..23805)
                     /locus_tag="R8X70_000766"
     CDS             complement(23443..23805)
                     /locus_tag="R8X70_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEF2928561.1"
                     /translation="MSNYPKAIGPYSAYREANGLLFISGQIPINPASGEIESSDIKEQ
                     TKQSLKNIGAILEENGISYDQVIKTTCLLADISDFAAFNEVYAQFFKSPYPARSAFAV
                     KDIPKGAKVEIEVIAQKG"
BASE COUNT         8083 a         3628 c         4159 g         7976 t
ORIGIN      
        1 atgaaaaaaa aattttttta cattctattg aaaatttgaa tataaataag gattttgttt
       61 ttatacctaa ggttaaaact tcatggttta accaaattgc ttataagcct tataatataa
      121 aaacctatca aatttttaac ttttctcggt ggtttaactt ggataatatt acaaattcta
      181 attcaaccca acttggccaa cttcaatcta aattatcctt ccaaactaaa tacggcacag
      241 ccaaatcccg cattcaaaac caactctctt ataaactagg acaagctatg ataataaatt
      301 caaaatcttt actaggttat ttaataatgc ccatgatatt attaaatata ataatttcgc
      361 acaaacaagc ccaaaaagct tataaattaa aaataaagaa aaatccaaat ttagctttac
      421 cccctttaga atcttaccct gattataaag aagctctaaa agaaaaagag tgtttgactt
      481 ataagctagg agaagctttg ataaaggcta ataaaacttg gtataagggt ggatatgtta
      541 agatgttgtt tgaagttagg aaattgaaga aggaatttaa aaagaaataa atgatataat
      601 ctctttttaa tttaaagaga gatttatgaa atttcacacc acttcaaaaa aacttataaa
      661 aaatgttaaa gatttttaca atatagtctt atataaggcc tataaaagca taggcaaaga
      721 agatgttttt gtaggctggg gcagaaaaaa ttcaggttta aaagctatag ctctagccaa
      781 aaaacatcat gctaaattta tacttttaga agatggcttt ttgcgctcat taaatttagg
      841 cgtagaaaat agtccgagtt tttctacagt taaagatgat gtggggattt attatgatgc
      901 gagcactccc tcaaggcttg aaaatatttt aaatacctat gagtttagcc ctaaagagct
      961 agctttggca aaaaaagcca tagagcttat caaaaaagaa aagcttagta agtataataa
     1021 cactctttgc ataccccaag agcttttcag cgccaatgaa gaacgcgttc taatcatcac
     1081 tcaagtggca aatgacactt cacttcgatt tggtttggca agtgattttt cgactcaaga
     1141 tatcataaat gacgccctaa aagaaaatcc aaatgctaaa atatatatca aaatccatcc
     1201 tgatgtgtta agtggcaaaa aacaaagcga ttttagcatg caagatttac ccagtagatg
     1261 cgtgatttta aaagaaaatt ataatcccat agaattatta agccatttta aaaaagtcta
     1321 tactaagact tcaggtatgg gttttgaagc tttgatgcta ggatgtaaat gcgtgtgcta
     1381 tggcatgcct ttttatgcag gatggggatt aactcaagat aagctagagt gtaaaagaag
     1441 gattaaaaaa agatctttag aagaagtttt ttgtgctgct tatattttat atagtgagta
     1501 ttttaatcct tacttaaatc aaaaaagtga tatttttgat actattttta ccctagcaag
     1561 atacaaaaag atagagcaag taaattctca tactttatat tttttaggct ttactttatg
     1621 gaagcgttgg tttatgaagc cattttttaa agccaagaat aataaaatca tttttttaaa
     1681 ctcacttgat gaactttata aagcgaattt aaattccgaa gataaaatct tcatttgggg
     1741 taaaaagtat gataaagctt tgctggccaa agattttaac aatgaaattt ttttagtaga
     1801 agatggcttt ttgcgctcgg tttttttagg ttcagatctt acgcgtcctt tttctttgat
     1861 agtagatagc aagggtttgt atgtagatcc taatcaccct agcgatttag aagagctttt
     1921 gcaaaatcat gaatttgatg atactttaag acaaagagcc aaaaagctca tcactaccat
     1981 aacgcaaaat aaattttcaa agtacaacgg cctaaagcat gaaaaacttg actttaatac
     2041 aaataaaaaa atcattttaa ttcccgctca agtagaagat gatgcttcga tgatcttagg
     2101 tggagcagat tttgacacct taaagctttt acaaagcgta agagctgcaa ataaagacgc
     2161 ctttgtcgtt tttaagcctc atcccgatgt tttaagtgga aatcgtaagg gtttaaaaga
     2221 taaggatatt attttaaaat actgcgatga gatcatagaa aatgtcagta tagacagtgc
     2281 tataaatgca tgcgatgaag tgcataccat cacttctact agcggttttg atgcgctttt
     2341 gcgtgctaaa aaagtagtag tttatggaaa gcctttttat gcaggctggg gcttgactca
     2401 agatttgcat cgtatctcaa gacgcacaag ggtgcttagc ttagaagagc ttgtcgcagg
     2461 agttttgatc ctttatccaa gatatattca tccaaagagt aaaaatttat gtgaagttga
     2521 gcttgcttta gatataatgt tagctttgca aagggattat ttttcaaaaa gatggctaaa
     2581 aattttaatc gactttagaa tttttatgct tagaaagata agaagaatat gtgaattttt
     2641 tataaaaaga tgaaatttag cgataagatt aaaaaagaat ttagtggtaa aaatgtcttg
     2701 cttttacaag gacctgtagg gacttttttt caccgccttg ccataaagat gaaaaaaaac
     2761 aaagccaaag ttttaaagct taattttaac ggaggggatt tttttttcta tccaagtgga
     2821 aaaaggtgca agtgcgatga aaaggatctt gaaaatttct atgaaaattt tttcaaagaa
     2881 aaaaaaatag atgctattgt gatgtataat gattgccgtt tgattcacgc aaaggctatt
     2941 aaagtggcta ggaaacttgg cattggcatt tggatttttg aagaggggta tttaagacct
     3001 tattgtatca cttttgaaaa agatggagtc aatgcaaact cttctttgcc tcgcgataaa
     3061 aatttctatc tttcttgcaa tatccttaca aaagaaagca taaaagaaat tccaggtggt
     3121 tttaaattta tggcttttag tgcttttttg tattggcttt tttcttttct gctagctcct
     3181 ttttttaaca acaagcttca tcatcgcacc ttatttcctt ttgaattttt attttggttt
     3241 agatctttat atagaaaata tctttataaa ctcacagaaa aaaaacttaa tcaaaaaatt
     3301 tatagccttg aaaaaaagta ctttttggct attttacaag tttataatga tacgcaaatt
     3361 aaacaccatt ataaaaaaag tatagaagaa tttatagaag aaaccatcct ttcttttgca
     3421 aatcatgcaa gggcaaagtc ttatcttgtc tttaagcatc atcctatgga taggggatat
     3481 agaaattatt ctaaactcat agatgagcta tgtcaaaaat atcatgtaga aggaagaatt
     3541 ttctatgtac atgatactta tttgcctact cttttaaaaa atgctttagg ttgtattacg
     3601 atcaattcta cagtaggttt aagtgctatt ttagagggtt gtcctactaa ggtttgtgga
     3661 aatgcatttt acaattttga aggcctagct tatccaaaaa aacttcaatt tttttggcgc
     3721 gaagctcatg cttataaacc caatcctagc ttggttataa attttaaaaa ttatctttta
     3781 aatacaaatc agttcaatgg taatttttac aaaaattcgt ttttaggttg ataaaagtct
     3841 gattaagaca gcttttaaaa caaaatgtta taatcaatct aaaaaagaaa tgaattttta
     3901 tggatagaga agtattttat atagcgggct atgatcctaa gagttataga ttttattatg
     3961 atttatttaa gaaaaattta aaagattatt ctcatagatt tgattttaaa gcagagataa
     4021 gcgggattga aaagaatgaa aactttcctt cttttaagat tgattgtaaa gatgttcaaa
     4081 cacgctatca ttttttaact tggaatgata ttgtcaaaaa aaattggtct caaagctaca
     4141 aagatgcttt gttagattgc tatagttttt ttagaattta tactatcacg ggactttttc
     4201 ttaaatttgg taaagagtcg atttatcagc ttatcacagg ctattatcct tttttttatg
     4261 ttgtcttttc tttgctacta tccttatgtt tggctttggg aagttttgtt tttttgcaaa
     4321 atcatatccc ttattttttg gctattatta taggcatatt tctaggattt ttactcaatc
     4381 attttttatt caagctaggt agaaaattgg ctgtattttg gatagcaagg atatgtgctt
     4441 tttgtgccac ttggaaagaa aaaagattgg gcgctatgga gcaaagaata aagctttttg
     4501 cagatgagat tttaaaatct ttaaagcaaa atgaaaacaa gcaagattac gaactcatct
     4561 tggtagctca tagtgttgga actatagttt gcatagaagt tttagaatgt atcttaaaac
     4621 aaaatttaga taaagcagta ttagataaat taaaaattct tacactagga gaatgcatcc
     4681 ctttaacaag ctatcaaaaa aatgcagacg actttagaaa gaaacttgaa tttgtttcta
     4741 catttgattt aaaatggtat gattacacct cgataatcga tggggcgtgt tttccacaag
     4801 tagatttttt ccgtacaagc ggggtgcagg ctaactttac cccaccgttt ttaagtgcta
     4861 aatttcatac tttgtatgaa caaaatgaat ataaaaaaat taaaagagat aaaaataaag
     4921 cacatttttt atatctttac agcccccata ttaaagggag ttatgatttt tttgctttca
     4981 ttgtggcacc taaattttta gaagaaaagg taaagatatg agtcaatgtc cattttttcc
     5041 aaaaccttat aaaaataaag cttcaatgct tttaactttt ttattaaagc gtagatcatg
     5101 gcttgatggc ctttatgagc gtagttataa aatgcaaaca ggttatgtaa aaatgccaaa
     5161 ttttgatctt tatgtgatca atgacactaa agaagttaaa agaatgatgg ttgatgaggt
     5221 taaagaattt ccaaaaagtg cattcttgca tgaactttta agtcctcttt taggagagag
     5281 tatttttaca acaaatggtg aagtttggaa aaaacaacgc gaacttttac gccctagttt
     5341 tgaaatgact cgcatttcaa aggtctttaa tctcatgagt gaagctgtag aagatatgat
     5401 gaagcgtttt gaaaaatatt ccaatggctc tattatcgaa gtggatgagg ctatgacttt
     5461 catcactgct gatgtaattt ttcgtaccat catgtcttct aagttagatg aagagcaagg
     5521 aaaaaaaatc ctagatgctt ttgtgacttt tcaagagcaa agcgtacata cagccatgcg
     5581 tcgcatgttt cgttttccta aatggctttc ttatgtgttg ggtgatcgta agcgcgctaa
     5641 agcaggtgat gtgattaggc aagttttaag cgatattata aagccaagat atgatgcggt
     5701 gaatagtgaa aaagcacaaa gttttgagga tattttagga tctttacttt tagtagtaga
     5761 tgcgcagacc aatcaacgct tttcttttga ggaaattcta gatcaagtgg ctatgctttt
     5821 cttggcaggc catgaaacaa cagcaagttc tttaacatgg actctttatc tgcttagcct
     5881 ctatcctgat gaacaagaaa aagcttataa agaaatcatt caagttttac aaggtgaaaa
     5941 tatacaaatt tcacatctaa gacagtttaa atacttgacc aatatcttta aagagtctct
     6001 aaggctttat ccacctgtag gcttttttgc aagagaagca aaaaaagata caaaggtaag
     6061 ggataagatg attaaaaaag gctcaggtgt tgttatagca ccttggctga tacacagaca
     6121 tgaaggcttt tgggctggtc cgcatgaatt tagaccttct cgtttcgaaa gcgagtataa
     6181 aaaggatgct tatttacctt ttggagcagg agaaagaatt tgcataggac agggttttgc
     6241 gatgcaagaa gctattttga ttttagctag tattttaaga aaatataaat tagagctaga
     6301 agaaggtttt attccagatg tagtgggtcg tttaacggtg cgttctgcaa atggaatgaa
     6361 tataaaattt atcaaaaggg aatcatgaaa agagttagag caagaattcg tgccaatttt
     6421 cgcaaccgca ttaagcgcaa tctaaaagga agtttaaaag aaaaactagc agggacgatc
     6481 ttactttgcg ccatagtacc tttggcaatt tgtggatatt tactcatagt gatagtggga
     6541 acttttttta atacagctag agcaaggcaa ggtgtaagag ctttggatca ttttgtaaat
     6601 gcaagtttgt ttaatggcta tgcttgggaa agtgtatctt cgcatgcttg gcgtgaaaga
     6661 aatagaaaaa aatgggcaaa agtagtgatt aaaatcacag atttttttca aaaagatcat
     6721 tgcaaaagag ccaataaaag agaacaacct gtggttgatt ttatactttc aagaaattta
     6781 gataaacaaa ctataggtaa gagataaaat taatccaaag caactactgc aatagcaaaa
     6841 ccattatcat gtgagatgct aagagaggta gaattgattt taaatttttc taatacatga
     6901 gaagcgagtt ttaaatgagg agcatttttg ctgtcttttg aaatttctat atccaaaaag
     6961 ccacattctt ttgaaattcc tacgcctaaa gctttacttg ctgcttcttt tgcagcccaa
     7021 aaacctgcta aagttgagct agattttatc aatttttgct cattttggtt tagaaattta
     7081 tcaagaaaag cgttgccatg cttttgatag attgtatcta tcctagaaat ggcaactata
     7141 tcgcaaccta tacgcatcaa gaaactacaa aatcagtaaa ataaacattt ttgatgaagc
     7201 catcggtaag aatttcgttg atttttccaa caagctcatc cttaagtctt tctttgcctt
     7261 tttgcgtgct aacctcttca aaggtttttg cagttaaggt gcggataatg atatcgcgaa
     7321 ttaccgctac ttttttatca agctcaggtt ttaaaagctc tgtattttgc tctaattcta
     7381 tagtgcattt tacatatctt gagccgctat cactaagtaa atttaaagta aaaggatcaa
     7441 gaggatacat aggtcctata tttgcaaaat cacttccacg ttgcgccggt gctgtcactt
     7501 tagccttatc ggtttttgcc tcttcttttg gagctgcttt gacttcgctt tcatcgcttg
     7561 agctacttga aataagccat gcaatcacac ccatgatgct aagaagtaga acaaaaagta
     7621 aaatcactat aatgataaca agcgaaccgc cttttttctt tttttcttcg ttattttcta
     7681 attcttcatc cattaatttt tcctttattt agtgaaatta atgtaaaatt gtagcaaaat
     7741 tttcttttct atccaaattt tacattataa aaagaaaatt gattaaaaag atttaaggaa
     7801 aaattatgct agatgtgatt tttagagaat acgacatacg cggactttat ggcaaagaac
     7861 tcaatgaaaa aagtgtcaaa gctataggtt tttgtttggg acaaaccatg cttgcaaaag
     7921 gttgtaaaaa tgtaagcgtg ggttatgatg caagatatag tgctgatgag ctttatagat
     7981 atctagttag cgggcttaat aaagcaggca tacaagttta caacatagga cttgtcccca
     8041 ctccacttgg atattttagc ctttatgagg gtatgaaatt tgatgcaaat attatgatca
     8101 caggttcgca caatccaaaa gattataacg gctttaaaat caccataggt aaggaaagtt
     8161 tttttggagc tgaacttaaa gaattttcaa aagaagttta taagcattta gaggatgaga
     8221 ttgaagaaaa tttagaggct caaaaatacg atattttaag tctttatgtg aattttatgt
     8281 gtgagcaatt taacttttta aaggatttta attataaatt tgcaatcgat tgctccaatg
     8341 gagccgctgg ggttgttata aagcctttag taaaagcttt aaatttaaaa gctcatgtta
     8401 tgttttcaaa tcctgatgga caatttccaa accacgaacc tgatcctaca gaagaaaaaa
     8461 atttgcacgc tataaagaat tttttaaatg aaaatcaaga atatccttta gcatttgctt
     8521 ttgatggtga tgcagataga atggtagctt tgagtaaaac tcatattttt tgtggggatg
     8581 agctttgtta tttgtttgca aaaaatattc ctaatcctag aattttaggc gaggtaaaat
     8641 gctctaaaaa tctttttgat gaggtggcaa aatttggtac tatttttatg ggaaaaacag
     8701 gacattcaaa tattaaaaaa atgatgaaag aaaaagatat tgacttagca gctgaagtaa
     8761 gcggccatat tttctttaaa cacagatatt ttggatatga tgatggaatt tatgcttttt
     8821 taagagcttt agaactcgtt tataagggct atgatttaga aagtatgatc agtgccttgc
     8881 caaaacttta cactacgcct gagattaaaa ttccagtaag cgaggaagaa aaattcaaac
     8941 ttgtggatga atttaaaaaa gcgatagaaa agggtgcctt agaaggagta aagagtcttt
     9001 gtgaaatcga tggagccagg attgattttg gtgatggatg ggctttactt cgtgcgtcca
     9061 ataccagccc ttatcttatc acgcgttttg aagcaagttc tttggagcaa gcaaaagaac
     9121 ttgaagctaa agtatttaaa ctttttaatg atattaaaga atcggtttaa taagtatttt
     9181 aggtttattt gtaaatttag agaaaagcac gaaaacaaga gctttttctc atttatataa
     9241 cgcgttgttt gtgtgagaat gtagtaaaaa tatacactaa agatccactt ttatgataaa
     9301 aaacttaaac aaaattgtgt gtacattttt cctaaaagcc tttgatggta tttttgccac
     9361 acatccaagc cttgaaaaac gcataggata tttagaaaaa tattttggag attcgttcta
     9421 aaatggcata ataatttcaa cgattagtaa aattgcaaat accaaacaaa aaagattttc
     9481 taaaaaataa aaagttttgc ctaaaaaaga attttctaaa tgaaagggca caaggatgat
     9541 aaagactact ctaagtggga ttaaaatcat tcttatttga aggaaaaatt ttaaaaattc
     9601 tcaaaaatca ctatcaaata aaccaaataa gataattaaa ccaaaaaaga agagatatcc
     9661 gcccaaaaca tgggcgaatt gaaatttaaa cgatatcttg cttgacaatg agggcaaaaa
     9721 agctcattgg aaaactcaaa aaaatcataa aatttgttta tttttttgaa atttttagtg
     9781 tattttttgc attttaagct tatgccttgt tttttttaag actttctaac aattcttcta
     9841 tattgtaaat tcctcggtgc tcaggtgtta aaagatggat aagtatatca cctagatcaa
     9901 tgacactcca ttcttcactg ctttctatat ttaaaaattc ttcacccttg gctttgagtt
     9961 tggttttaag ttcatcgatt aaagataagg catgtttttc acccaaggta gctgcgatga
    10021 tgacatattt tacaaaataa tcttgctcgc tcatatcaaa ggtttttatg tcttcagctt
    10081 ttttttcatc taaaatttta acgattaaat ctactctttc ttgcattttt tttcctttaa
    10141 atttttgaaa ttgtatcagt ttttttgtaa tttttcatag taatttttca cttcattttt
    10201 aatttcatcg caaacttcat gggtatctag ggtgcttctt atgaaagatg aggcgatttt
    10261 tatattggtt tttaaatctt taaaattttt tggaatttct atatcattgc gatttgcgat
    10321 gataaattct actaaagaat taagtctttc aaaatcatgc caaagatgaa gtttttctaa
    10381 atgatccgca ccgattagaa gataaaattt gctaggatga taaattttat aaagatattc
    10441 tacgctttca atgcttggta cggggcgttt ctgcttgatc tcaaagtcgc aaatttctac
    10501 tttttctaaa tttccccaaa gtttatttac ccaagcaaat ctttgttttt catcggcaaa
    10561 aaatcctttt ttaaaaggat tgataaaagt aggcacaata atgagtttat cgatatcaag
    10621 ttttgccaaa gcttctttga taatagcgtc atgtcctttg tgtggtgggt caaaactgcc
    10681 accaaaaagt gcaattttca ttaaaatttt aacctttttt tagtaaaata ttagcataaa
    10741 aaacttcgca aaaggaaaca aaatggccgt aaaagttgct ataaatggtt ttggtcgcat
    10801 aggaaggtgt gtagcaagaa ttatttcaaa acgagatgat attgaacttg tagcgataaa
    10861 tgatactaca gatatcgaac ttacaaaata tctttttaaa tatgacacag tgcatggaga
    10921 atttgaaggc agtgtggaaa atgaagggga tgatttaatt atcaatggta aaaaaatcaa
    10981 agtgtttaaa agccgcgata taaaagaact tgattttgca aaatacggtg cacaaattgt
    11041 tttagagtgc acaggggctc atttgacaat agaaaaatgc caaggatttt tagatatggg
    11101 agtgcaaaaa gtgatcatga gtgctcctgc aaaagatgat actcctactt atgttttagg
    11161 tgtaaattca caaaattata aaggtgaaaa tatcatctct aatgcaagtt gtacgactaa
    11221 ctgcttaggt cctgtttgtc gtgttttaca agataatttc ggcatagaaa aaggactgat
    11281 gacaactata catgcttata ctaatggaca aagcattatc gatgcaaaga ctaaagataa
    11341 acgccgctcg cgtgctgctg ctcaaaatat cattccaact tctacaggcg cagcaaaagc
    11401 gatgaagctt gtaatgcctg aacttaatgg caagcttcac gggcaaagta tgcgtgtgcc
    11461 cgttattgat gtttcaagcg tggatttaac cgctcaactt agcaaaaaag taagcaaaga
    11521 ggagcttaat gaagccttta gaaaagctgc agctacaaat ttaaaaggca ttttaatggt
    11581 tgatgatgat gaaagggtat cgagcgattt tatcacttgt tcttatggag cggttgtggt
    11641 aagtgatttg acccaagtta tagcagatga ttttgttaaa gttgttgctt ggtatgacaa
    11701 tgagtgggga tactcaagcc gcctagtaga tatggcagta tatattgcaa ataaggctta
    11761 atcatgagtg atattatttc tataaaagac attgatttag ctaagaaaaa agtttttata
    11821 agatgtgatt ttaatgttcc tcaagatgat tttttaaata tcactgatga cagacgcatc
    11881 agatcggcta tccctacgat aagatattgt ttagataatg gttgcagtgt gattttagct
    11941 tcgcatttgg gtcgcccaaa agagatcagt tctaaatatt ctttagagcc tgtatctaag
    12001 cgtttagcaa ggcttttaga taaagaaatt gttatggcaa aagatgttat aggagaagat
    12061 gcaaaaagca aagcagcaaa tttaaaagca agtgagattt taatgcttga aaatttgcgt
    12121 tttgaaaagg gcgaaactaa aaatgatgaa aatttagcta aagaacttgc ttctatggcc
    12181 gaggtttata tcaacgatgc ttttggggta tgtcatagag cacacgctag tgtagaggct
    12241 atcactaaat tttttgatga aaatcataag ggtgcaggat ttttactaca aaaagagatt
    12301 gaatttgctg aaaatcttat caagcgtcct gcacgtcctt ttgttgctgt tgtgggtgga
    12361 tcaaaagtaa gtggcaagct tcaagctcta acaaatctac ttccaaaagt tgataaactc
    12421 atcattggtg gtggtatggc atttactttt ttaaaggcgc aaggttttga tataggaaat
    12481 tcacttttag aagaagagct tttagaagaa gccaataaaa ttcttacaaa aggaaagaat
    12541 ttaggtgtta aaatttactt acctgtggat gtagttgctg ctcctgcttg ctctcaagaa
    12601 tcaccaatga aatttgtacc ttcgcaagaa attccaagtg gctggatggg cttagatata
    12661 ggtcctgcaa gtgtgagact ttttaaagag gttatttctg atgcacagac catttggtgg
    12721 aatggaccta tgggtgtttt tgagatcgat aaattttcaa aaggcagcat aaaaatgagc
    12781 catgctatca gcgatggaca tgctactact gttgtagggg gtggcgatac ggctgatgtt
    12841 gtcgcgcgtg ctggagatgc agatgaaatg acttttattt ccacaggtgg gggcgcttcg
    12901 cttgagctta tcgaaggtaa agaattgcca ggtgtaaaag tcttaagaag tgggggagtg
    12961 caatgatatt tgctgcaaat ttaaaatgca atcatacaag atcaagtttt aaaatttatg
    13021 caaatatttt aaatcagtat ttagaagcaa aaaacgatga tatcatcgtt tttccaccta
    13081 gtatagcttt tttagaaaat gaattaaatt ttatacaagg ggcgcaaaat ttttatcctt
    13141 gtgtcaatgg agcttttaca ggtgaacttg gaaaagagca tttggatgaa tttggaatca
    13201 aatgtgtttt gatagggcat tctgaaagaa gggctttggg tgatgaaaat ttaatcaaag
    13261 ctaaatttga ttttgctaaa gagcatgctt ataaaatcgt tttttgcata ggcgaggatt
    13321 taaagcttaa aaactcaaat caaaccttag attttttaaa aaaacaactt gaagttattg
    13381 acctagatta taaaaatctc attatcgctt atgagcctat ttactctata ggaagtggtg
    13441 tgagtgctaa aaaagaagat attgctaaag tgcttgaatt tctttcttcg cttacgcaag
    13501 ctcctttgct ttatggcgga agtgtaaatg aggacaatat caaagatatt ttaaatataa
    13561 aacattgcag cggtgtttta ataggatctg ctgcattaaa agctgaaaat tttataaaac
    13621 taattaaagg ataaatgatg ataatgaaag gcaaaaaagg ccttatagta ggcgtagcca
    13681 ataataaatc catagcttat ggtatagcaa aagcttgtta tgagcaagga gcaagtttag
    13741 cttttacttt tttaaatgat gcattaaaaa agcgtgttga gcctatagca gaagaatttg
    13801 gatcaaactt tgtttatgag cttgatgtaa ataacagcga tcatttagac tctatcgctg
    13861 aaaaaattaa aaaagattta ggtgagattg attttatagt acatgctgtt gcttatgcgc
    13921 caaaagaagc tttagaaaat tcattcttag aaacttcaaa agaagctttt gatatagcta
    13981 tgggaacttc tgtgtattct ttactttctt taacgcgtgc ggtattgcca gtattaaaag
    14041 aaaagggtgc aattttgact ttaagctatc ttggcggggt aaaatatgtg cctcattata
    14101 atgttatggg tgtggcaaaa gcagctcttg aaagttctgt gcgttatttg gcaagagatt
    14161 taggtatcaa aggaattcgt gtaaatgcga tttcggcagg gcctattaaa actttagcag
    14221 caagtggaat aggcgatttt agaatgatat taaaatacaa tgaaatcaat gctccattaa
    14281 aacgcaatgt aagtattgaa gatgtaggaa attcagcgat gtatttactc agtgatttag
    14341 ctcgtggtgt tacgggtgag gtgcattatg ttgatgcagg atataacatc atgggaatgg
    14401 gagatgtcac aaaagacgaa aatggaaata ctgtgctttg ttgggataat caaaaaggac
    14461 aataatggca aaactcagca atgaagagtt aaaagatata cttataaaac gcattgaaaa
    14521 aatcgaaaat tcagacttgg tagataaaaa aactatcaat gaagaaagcg taaaggctct
    14581 tgctaagcat ttatctttgg gaaatgaaat tccagctctt gcgcaaaagt ttttcgaact
    14641 tgctcctaag actaaggttg tttggcttca tctttgcgaa tgtacaggtt gtagtgagag
    14701 tttattgcgt gcggatttac caagttttga tgaattagtt tttgactttt tttctttaga
    14761 gtatcacgaa actttaatgg cagcaaatgg gacaaaagct gaagaacttt tagagcatgt
    14821 tttaaaagaa gactttgttt tagcggttga aggcggtgtt gcagctattg atacattttt
    14881 tcttactata ggtgcagagg gtgagagtgg ttatgaaatt ttggaaaaat tagcagctaa
    14941 agccaaagct atttttgctg tgggaacttg ttcttcttat gggggaattc aagctgctta
    15001 tccaaatcca agcaaaactt gcggtatttc tgaagtttta acccaaaaag tagtcaatat
    15061 ccctggctgt cctccaagcg atgtaaatat catcgcaact ttggcttatt ttgctttatt
    15121 tggaattttg cctgaacttg atgagcaaaa ccgccccgtt tgggcttatg gtaaatgttt
    15181 gcatgatttg tgcgaaagaa aggctaaatt tgagagtgga atttttgcag aacattttga
    15241 tgatgaaaag gctaaaagtg gagcttgttt atttaaaata ggctgtaaag gtccttatac
    15301 ttataataat tgtcctaaag taaaatttaa tgctaaaact tcttggcctg tggctgcagg
    15361 gcacggctgt atagcctgta gtgaaaagaa tttttgggat gaatttggaa attatgaaaa
    15421 acctatggca aatccttttt cttatgctaa gcttgtaaat caggaattta gtacagaatt
    15481 tgccctagaa gagcaaattc aaatcctatc ttcgatggat tttgaatttg aaagtaattt
    15541 aaagcttatc ttgcaaaaca ttgctaaaaa taaattaggt gctttacttg tagaaaatta
    15601 caaaacatct tttgaaaaaa actttatttt tatagagcaa aattttgatg aaaattctat
    15661 gccttctagt gatatttgga agtattttga gatcaatttg attttggcaa agggtgagtt
    15721 tttacaagat aaaaacgatt ttttaaaagc ggcgcaaaat tatagcttta agcatgcaag
    15781 tccttatgat tttaaactta ctcttaatga aaaatcaaaa cttgatgtga gtaaatcttt
    15841 tcgtatgcct ttgatttatc tttgcggagg gcttgatttt gaagctcttg cttatagcgt
    15901 tttgaaggct tttgaaaaaa atatcaaaag cgtgatagac tttaataaac aaaaagcggg
    15961 ttaattgatt acaaattttg taatatttaa ccctataaaa gccactatat aggcgctgat
    16021 gcaagtaaaa agaaaaagga aaaaagtata ttttattttt ccgctttctt ttgaaaagac
    16081 tatggttgca gcaaagcaag gattataaat cattacaaat aaaatatacg ccaccgcact
    16141 aggcaaagga atatttttag caataatacc ttttaaatca ctgcttgttt catccacttc
    16201 ttttccaaga gaataaagca cccccatggt agaaatcatt acttcttttg cggccaaacc
    16261 actgactaaa gatacgctta atttccaatc aagctcaagc ggagaaaaaa taggctcaat
    16321 tgttttgcca aattgcccta gataactttg ctcaacagct ctttcttgag cgctaaaatc
    16381 atctaaattg ctttcattgt ttggaaaatt gcttgcaaac catataagta aggaagctac
    16441 aagtataaag gtccctgctt ttttaagata cattttagct ttattaaaga ccataaacca
    16501 tactaaatgc caatttggca tacgatattt tggcatttcc atcacaaagg gttcatcaat
    16561 accgcgaaat gcagtggatc ttaagaattt ggccgcaata agccctaaaa tagcacctag
    16621 aagataaatt ccaaaaaggt aattccccgc ttcttcactt gggaaaaatg caccgataaa
    16681 caatacataa acaggaagtc ttgccccaca actcataaaa ttaatcacaa agagtgttaa
    16741 aagtctatct cttttatttt taagcgtgcg cgtagccata aaagcaggca cagagcagcc
    16801 aaaaccagtg atgagcggaa tgaagctttt tccatgtacc aaatttatgt aaaattccgt
    16861 ctagtaagaa agccactctt gacatatagc ctgtagtttc taaaagagca atgcctaaaa
    16921 ataaaataat gatattaggc aaaaaaagca ccacagctcc aacacctgca atagctccat
    16981 cagctaaagc tgacgcaatg aaagtgtttt gaatattgcc tttgacccat tcgcctaaag
    17041 tattaaagcc tgattctata taatccatag gaatttgccc tagggtaaaa gtgagttgaa
    17101 acaaaagcca cattaaaaat aaaaatatag gcaaaccaaa aaatttgtgg ataagcaatg
    17161 catcaatttt tttagtaaga tttctttctt cttttttgta ggtgatgatc tttcttgaaa
    17221 gcccatttac tagggttagt atatcttctt tttctaagct cttttcgcaa agtggagtag
    17281 aaaatcttga tttgggtgta aatttatttt caaataaaat aatgattttt tcaagtaaaa
    17341 gttctaaatt ttgttttagc tgaaatttca acaacttgac tttgaaattc ttggcttaaa
    17401 acagaagtgt caagctctat accttctttt ttggcttcat cgcacatatt taaagctaaa
    17461 agcatttttt tattaaggct taaaagttct gcactaagga taagattacg ttctaaattg
    17521 gtagcatcta aaacattaac aataacatca tagtcatttt gatttaaaaa atggcgtgtg
    17581 attttttctt cttcactata tccatctaaa gaataagttc ctggtaaatc aatgacttca
    17641 aattcatagt ttttgtaaaa agtttttgca cttgcttttt ctatagtaac tccgctaaaa
    17701 tttcctactt tcatattagc tttgcaaagc gcattaataa gaagactttt gcctacatta
    17761 ggctgaccta caagggctat tttgattttt ttcatataag attcacttct atggttttag
    17821 cttcatcaga tcttaggata acacaacttg tatcaagttc taccattatg gtggcatttt
    17881 ttaaagagga atgaattttt ttcaagtttt tatttttaat aaatccaaag cttaaaagtc
    17941 tatttttgag ttctttgtga gcgtttaaat tgacaataat agctttttgt ccatctttta
    18001 actcgtttaa agtcattgta attcctaaat taataataaa tattataata aaaaagtgta
    18061 atgaaattat ccttcttgta aaaagaagga taaatattta aaaagaaaag tggtttaaat
    18121 tttctagatt gatgatttga tctagaattt tgttagcttt agcattatca aggtaaattt
    18181 gtgcattggc taaaaattta gcttttaatt cttcaaaact taatggatta tcaaaattac
    18241 ctttatttat aaaaacatct ttttggattg tgcgtccatc ttgcaaactg gcttctaaat
    18301 gccctggaaa atactttgga aagccttgag attttctttt ttcgtacctg atttttttag
    18361 caaattctag tacttcttca cgctttaaat tttcataaga ttcaagagtg attttaccat
    18421 caaagaatcc tagagccatt aaaaaaggca tggaaaattt agcttcataa gcactatttg
    18481 gagtgtattt tgcttctaaa ggatcgcaga taaaagaaat aggaacttca tctacaaaac
    18541 aatgaatact tttaatttca tcagctttta aaccatcatt ttttaaagca atagcacaat
    18601 caataagccc atgagcaaaa tgacaacttg gataaggctt gattgaaact tgcatagttt
    18661 gccaaatttc tcctaaggct ttgttaagtt ctgttttatc gcattcttct tctatgccaa
    18721 aacatttaaa gatattatcc ctaccttcaa aaatactcaa aggtccactc atattgtttt
    18781 tagcaaaatg agctactata ataccgtttt taatagcatt ggcaatatgc aaaacttttg
    18841 aattagatcc attggataaa aactcattaa tcccacttgc aaaacttcct gcaagtccta
    18901 aagcattgat gatttgttct ttgttaagat ctagcaagat tgcacttgca cttacgcttc
    18961 caaaaattcc tgcaatagca gtggtatgaa aaccacgctt atgaaaagta cctttgcttg
    19021 caatgcctac tctagctgca atttcccagc ctactataaa agctttgatg atttttttcg
    19081 catctttgct aacatgaaaa ccataactta aacaaagtgg agttaaaatt gcacttgcat
    19141 gcaaaatcgc ttctgtatgt gtatcatcaa aatcaagtgc atgagaagca atgccatcta
    19201 gcatggctgc gtatatagga tctaattttt gatcatttac ccaaataaga gtattttttt
    19261 ctgtgcttaa attttcaaaa gctttaaaag catttaaaac acattcttct ttgcttgctg
    19321 ctatagctgt tccaaggcta tcaagcataa gctctttagc tctttgaaca actgtattag
    19381 ggatattttc atatttaaga ttgaaaataa aatccgctaa aatttcgcta tataacatcg
    19441 tttttcctat tttaaaatag cactattttt gattttttcc aaaaattcat ctacaagttt
    19501 tggtgcatat cctacatagg ttgttgcatc aagcaaagca tcgatttctt tttctttcaa
    19561 taccttagat actcttttat ctgcaagtaa aacttcttta aaagtttttt gtttttcgat
    19621 acctagcata gcattttcat aaacaatctc atgggcgtgt tgttttccat aatgatcgct
    19681 taatgcaaac ataacacgct ctgctaaaac aaaaccatta agagtattta aatttttaag
    19741 cattttgtct ttttttactt ctaaatcact aagagcgaat ttcatatttg ctaaaaccac
    19801 agaaagcatt aaaaacattt caggtaaaag cttccattcc attttccaaa cttgaccatc
    19861 tctttcatgt tcatgtcttt caatatcgct taaaatggct aaatttgcct taaaggcatt
    19921 gcttactgta actgcatttt cgcttactgc aggatttctt ttgtgtggca tagtgcttga
    19981 tcctacttgt cctttgccaa aaggttcagc aacttcatca atttcattat gtgaaaggat
    20041 taaaatttca tgagcgattt tgttaaaggt tgcgttgata ttgcctagta caaaaccaag
    20101 ttctataaag cgatcacgtg cgctctgcca agaaatatta ggcacatcaa gtcctaaatt
    20161 ttctaaagtg agtttttcta cttcattgca ctcatcactt aaacttgctt tagttcctac
    20221 agcgcctact atactgccta cataaagtct tttttcaagt tcaagtattc tttcaaaatg
    20281 acgctcaagt tcgcttaacc aaatagccac tttatgtcca aaagtaatag gcaaagcctg
    20341 aagtgctaaa gttcttccca tcatagcagt atttttgtgt gttttagcaa gttttactaa
    20401 agcttttgca atggctttta attcgctttt tacaagagtc atagcttctt taaattgcaa
    20461 aacaagtcct gtgtcaatga tatcttgagt ggttacccca aaatgtacat attcgcctaa
    20521 attattatcg caagcttttt ctaaacctct aacggtagga actaaaggat gtttagtttt
    20581 tttaaattca ttaaaaataa aatccatatc cataaattta taataagctt ttttttgcga
    20641 tttcatctgc tgcttcttga gggatgatat taagttttgc ttgtgctttt gctaatgctg
    20701 cttcaacatc gagccatttt tgtatgcgat tttcttcaca aaaaacagca cgcatatctt
    20761 gcgtgctcca tgaatctgct aataatttat gatcaaatac gctaattcca gtcattttat
    20821 ttccttattt ttttaatact atcaaaagcc ttagttaaat cagcaatcaa atctttagta
    20881 tcctcaagtc ctatgtgaaa tcttacaaat ggacctcttt tgctccagtc tgttgcagtt
    20941 cttggcggag tagttacagt tgctaaactt tcatagccac cccagctagc acctatagaa
    21001 aaatattcta acttatctac aaatttaata gcatcttctt tgctatagcc ctctgcaaat
    21061 tcgatagtaa ccataccatt agcaccttta tgatcgcgca taaaaatttc atggtttgga
    21121 tgagttttga gttttggata gaaaatagtt ttaatttctt ttcttgtttg taaaaattcc
    21181 acgatttcat ccgcactttt ttcatgagct ttcattctta catctaaagt tctcatacca
    21241 cgaagaacca aataagcatc atcgggactt gttgtaaagc ctaaagcttc aggaagtttg
    21301 tcaaaatttt tccattcttt ttcgttgata actactacac ccatagtaac atcagagtga
    21361 ccgctaagat attttgtagc ggcgataacc gaaatatcta cgcctagctc aagtggattt
    21421 aggaagtatc cgcttgaata agtattatca atagctacag gaatattatg agagtgtgca
    21481 attttgcaaa gctttggcaa atctatgatt tcataaagta tagaaccagg gctttcgcat
    21541 aggatgagtt tggtattagg cttgattttt tcttctacat cacttgcatc ggcttttaaa
    21601 aaatcaatct caacacccat tttttctaaa aataattcac aaattgttct tacaggccca
    21661 tagattgcat cagtgattaa aaaatgtgcg tctttactag catagtttaa aagtaccata
    21721 gcaagtgctg caagtcctgt tgggaaaagt tgagctctgt agccgccttc taagctgcag
    21781 ataagttttt caagttcgaa gttagttgtc gttcctctag caccatagct taatacacga
    21841 tcagtttttc ttaattctct atatttttgc caagtggcat gatctttaaa aagtatggtt
    21901 gatgcacgca taagtgtagg attgactgat cttacttcaa cattttgatc acctctaccg
    21961 caatgaataa gtttggtttt tgagttcatt ttgtctcctt ttaaagataa atataagtca
    22021 taatgatatt tacaatagcc gctacaagca taggaatagc tgttctttta actacagcaa
    22081 aaggacttac ttttgcaata gctgagatag ctaaaatagc aggtgctata gggctcacac
    22141 atcttccaaa gcctgtcatg atttgaatag gtgctatcat ggtgatagtt tcaatgccaa
    22201 agtgttttgc tatatttggg ataagtgggg caaagctaaa aaatgctgca tttccagaac
    22261 ccattaagaa agcacaaact gcaagtaaaa ttgaaactgc gatgatgata gcaagtactc
    22321 caaattctgc atttttacaa aattctatta aggtatctac aaagccaacc gataaaagcc
    22381 cgcttgcaaa tacttgaccg catactagca aagaaacagt gataacaaat aaatgtccca
    22441 ttcctttaaa gaatatcata atagaattga gtgtttctac tacgctttta tagcgtatca
    22501 tttcaaaaac aatcgcaaca aaagttgaaa tcaccatagc cacaggaaca ttcattttga
    22561 tagccgaact agctgcagct tttacttctt cagcgctact aattcccatt aaaactaaaa
    22621 tgctatcaag tacagaacta aatccaagta ttaataccaa aggtataaca ggcaagatag
    22681 cataaatttt tggaggtttt ttaagttcat tttctttatc tttattttca ctgagttctt
    22741 tttctacttc ttgagcatta aaaacaaaat tatctttttt atcaaagaat ttattgcaaa
    22801 aatatatagc aatacctaca gctacaatga taggtagggt tgtagggagt tgataatgaa
    22861 caaaataaat agcaggatcg atttcagcta cttttgaagc catgattaca ttgccacttc
    22921 caggaccatg atcgatatat tgacaaatac caattacgct tagagctgaa agtttagaaa
    22981 ctccagagcg aaccaatata ggaacatagt aaccataagt aaaagtccta agcctgcatg
    23041 agaagggata aaaagaacta aaaattgcac gataaaatat gcaactaaaa gtaaaacata
    23101 aggggatttt accattttta aaggtttttc aaaaacttta aagagtgcgt aagatgcacc
    23161 aacatgatcc atataagcag aaaaacctgc tatagccatt agtgttagtc ctagacctgc
    23221 taaggtgttt gacatggttt ggttaaaaac ttgaaaaata tcaaaaaaac ctaaatttaa
    23281 agaacctttt gcaacaatat gtggcgaaag tccaaaaata gcagccaggg aaagcaaaag
    23341 taaaccactt aaaagcaatg ccatgtgagc attgattttt ttataaagca taaatacaag
    23401 taaaaaaaca ctaaataaag aaaaagttaa acctaacatg ttttatcctt tttgagcaat
    23461 aacttctatt tctactttag ctccttttgg tatatctttt actgcaaatg cacttcttgc
    23521 aggataggga gatttgaaaa attgcgcata cacttcatta aaggcagcaa aatctgaaat
    23581 atctgctaaa agacaagttg ttttgatgac ttgatcgtaa gaaattccat tttcttctaa
    23641 tatagcccct atatttttta gagattgttt agtttgctct ttaatatcag agctttctat
    23701 ttctcctgat gctggattga tagggatttg tcccgagata aaaagcaaac cgtttgcttc
    23761 tctataagct gagtaagggc cgatagcctt tggataattt gacattttct ctcctttttt
    23821 attaatgtaa attaaataaa cgtatt
//
LOCUS       DAQUWA010000023        23716 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.023, whole genome shotgun sequence.
ACCESSION   DAQUWA010000023 DAQUWA010000000
VERSION     DAQUWA010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23716
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.023"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..127
                     /locus_tag="R8X70_000767"
     CDS             <1..127
                     /locus_tag="R8X70_000767"
                     /inference="COORDINATES: protein motif:HMM:NF024499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3944 domain-containing protein"
                     /protein_id="HEF2928562.1"
                     /translation="EFLRELNDESLDNLVSILIKDENGKTRTTESLTNKDLYKKH"
     gene            153..1745
                     /locus_tag="R8X70_000768"
     CDS             153..1745
                     /locus_tag="R8X70_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosome-binding GTPase"
                     /protein_id="HEF2928563.1"
                     /translation="MILEELQTFGGNTFANKIRGTGVVYKEILCDVADNLKVKYDKSA
                     SIENIEKAILLNSFNKSLENLSESDLKEIAKDFSIDVNTYTIESISNAIAKTNNLKLL
                     YQIAMLVVNAIASKVAINTAIFTTSSLIAGSGLVGSAAISGVLGSTATFLGSRAVGTL
                     AGPIGMIISSAWMINDIAGPAFRVTVPAVIYVAFLRRQFLYEKEMIKQMEAEQKEKVS
                     NLNKGKKYSATELFNQELNILIVGGTGAGKSSTIKALFETEGYNLDIEINSGGKPVTQ
                     EIKEYKLGNLTIYDSPGLGDSGENDNEHMKKIKNLLLEKDSKGNAKIDLVLVVVAATV
                     GRDLESTYKTIKEAIMPYMEEKERILIALNKCDKAGADEDIEFDKENNQLTPELEEIL
                     EEQVKAIKERIKTDTGVDVDVIYYAAGSTSKKTKIKKPAYNLNKLLAYIVAKAPLKKR
                     LVFLKHQSRNQDDFKYGDNKENYTEEMVKSFIETIKEYAKNVSDFIIEVKNFFTSDKG
                     KEVVGVVKDVFEGIVSIFGKRK"
     gene            1745..2047
                     /locus_tag="R8X70_000769"
     CDS             1745..2047
                     /locus_tag="R8X70_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928564.1"
                     /translation="MFSKILSALSLANSFKAMIFKRLSSPVQSAYLGSLVWDIINILN
                     RDQQDSEKICQILDLLSDFKNKHPEDFDKIVDILKEILDEYEKNPSEVKKNLKELF"
     gene            2049..3155
                     /locus_tag="R8X70_000770"
     CDS             2049..3155
                     /locus_tag="R8X70_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2928565.1"
                     /translation="MQNLLILYNPYYQQDVIKLHLEILLDKGQVAFGKIKSKLKEPLS
                     YERDENKISHNQKLSEIYKNTSADNPLQLFLSDYANLFVAKVVKISKEVDKNIIPKYY
                     QEKNLEVEDYFLIIDLRELVRENFTLIRDKFLANFTTENNHTYAIYGNNYSYPLVVKQ
                     KEEINYFYDEINKYYLSVYKNQEYLKMQENFIQFIFGKKFFYMLHPDSINNLILAELE
                     LQQNLENPLYDFTSIIVKYSKTIEYEIYDFAKKIFTKLIKQNSHLSSISYSIQGKEFN
                     FKQFFINKPNLGTIKFLLKNREIQELLDRDVKGFINYEFNKTLDEFQTIRNHAVHAKS
                     PTLEQTLKIRNLILGIENTSILKRVLEYKFKQKG"
     gene            3330..4190
                     /locus_tag="R8X70_000771"
     CDS             3330..4190
                     /locus_tag="R8X70_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEF2928566.1"
                     /translation="MSHDKLAVRLAQILMRFNNGGRFSLEELASEFNVDVRTIQRDLN
                     QRLSFMPIKKENGKYFLESFALGKLSVKDIQNFAMLSGIQELYPKLDEDFITDLLNSK
                     VNSIFMIKNNGFEKVDYENFKIISVAILKHNILNFNYKEKSREVKPYKLLNYQGIWYL
                     IADEKDKLKHFTFSKIKNIRKNDEIFTPKEEFLDQILNDKNIWLDDSKEAIVKLDKKA
                     KEYFFRKNILNNFELIDEDEQSYTLKVYFSYDDELLNVVKQWIPYMKIEKPFELKEKL
                     DSILKDYLEN"
     gene            4256..4474
                     /gene="infA"
                     /locus_tag="R8X70_000772"
     CDS             4256..4474
                     /gene="infA"
                     /locus_tag="R8X70_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEF2928567.1"
                     /translation="MAKDDVIEIDGTVLEALPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            4645..4758
                     /gene="rpmJ"
                     /locus_tag="R8X70_000773"
     CDS             4645..4758
                     /gene="rpmJ"
                     /locus_tag="R8X70_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEF2928568.1"
                     /translation="MKVRPSVKKMCDKCKVVRRKGVVRIICENPKHKQRQG"
     gene            4761..5126
                     /gene="rpsM"
                     /locus_tag="R8X70_000774"
     CDS             4761..5126
                     /gene="rpsM"
                     /locus_tag="R8X70_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEF2928569.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            5136..5528
                     /gene="rpsK"
                     /locus_tag="R8X70_000775"
     CDS             5136..5528
                     /gene="rpsK"
                     /locus_tag="R8X70_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEF2928570.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     MEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            5558..6184
                     /gene="rpsD"
                     /locus_tag="R8X70_000776"
     CDS             5558..6184
                     /gene="rpsD"
                     /locus_tag="R8X70_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEF2928571.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARRDGNTGVLLIQLLEQRLDN
                     VVYRMGFATTRRFARQLVTHGHILVNGKRVDIPSFRVEAGAKIEVIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVIIPVEERFIVELYSK"
     gene            6198..7211
                     /locus_tag="R8X70_000777"
     CDS             6198..7211
                     /locus_tag="R8X70_000777"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEF2928572.1"
                     /translation="MRNITTSAYTPTEFTIENISDSVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKLKSDSNKEIVE
                     FSFKGPKEIYGKDLNNDQVEVVNTDAYLATINEDAELKFTLIIEKGIGYVPSEEIKEL
                     LNDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSIIKSQATSNELENTKLLQNITDLNLSARSYNCLEKAGIVYI
                     GELALMSVNELAGLKNLGKKSLDEIKSIMESIGFPVGTSKLSDNKDLLKKKIDELKAQ
                     NEG"
     gene            7215..7568
                     /gene="rplQ"
                     /locus_tag="R8X70_000778"
     CDS             7215..7568
                     /gene="rplQ"
                     /locus_tag="R8X70_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEF2928573.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYVERLITRARLGDFNAHRAVFAALQDKNATNKLVTEIAPNFKERNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
     gene            7786..8685
                     /gene="hisG"
                     /locus_tag="R8X70_000779"
     CDS             7786..8685
                     /gene="hisG"
                     /locus_tag="R8X70_000779"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEF2928574.1"
                     /translation="MQENSRLRIAIQKSGRLSKESVELLNKCGIKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERKSLGEEANYKLLTKLDFG
                     YCRLSLALPQEKKFDNLKDFENLRIATSYPQLLKRFMKENNIHYKNCMLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYQSRACLIQKQNTLSDEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIRSLLPGVEKPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
     gene            8693..9979
                     /gene="hisD"
                     /locus_tag="R8X70_000780"
     CDS             8693..9979
                     /gene="hisD"
                     /locus_tag="R8X70_000780"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEF2928575.1"
                     /translation="MQIINFNELDEKQKQEVLKRPAIAAKDEISQIVSSIIKEVREKG
                     DEALIEQALKFDKAQISSIKVSEEELENASLRLNKDLKEAILIAYENIKKFHEAQIPK
                     EIAIETTKGVKCEVLTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAQCEKIVLASPA
                     KINDATLFCAKLCGVDEIYQMGGAGAIAALAYGTKSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGAAIDMQAGPSEVLVIADEKANVKFVASDLLSQAEHGADSQVILVCLSKEFAQ
                     GASDEVSRQLENLPRKELASKSIANSKIIIAKNLDEALLISNLYAPEHLIIQTQNPRE
                     LLDKVKHAGSVFLGELSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMSVQEL
                     SKEGFLNLGKSVEILAANEHLDAHKNAVTFRLESLK"
     gene            9976..11037
                     /gene="hisB"
                     /locus_tag="R8X70_000781"
     CDS             9976..11037
                     /gene="hisB"
                     /locus_tag="R8X70_000781"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HEF2928576.1"
                     /translation="MSEKILFIDRDGTIIEEPKSDFQIDSLEKLRFEKGAIPTLLKLK
                     NFGFKFVLVSNQDGLGTQSFPKEDFEIAHQKMLDILQSCGIEFKDIFICPHFENENCE
                     CRKPKTALLDEYIKHNLYNKEQSFVIGDRDTDMILASNLGVRGLKYSENLTWKEIEEE
                     ILNSFRTASISRITKETNIHVKVCLNGGKIAINTGVPFFDHMLEQIAVHGGIGLEISC
                     KGDLEIDEHHSVEDVALALGSAIKQALGDKIGITRYGFVLPMDECLASCAIDFCNRPH
                     LVYKAKFKKEKLGELSTEMIEHFFYSLSYSMGVSLHLKVKGKNDHHKAEGLFKAFAKA
                     LKMAVKIESENLASSKGVI"
     gene            11034..11621
                     /gene="hisH"
                     /locus_tag="R8X70_000782"
     CDS             11034..11621
                     /gene="hisH"
                     /locus_tag="R8X70_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEF2928577.1"
                     /translation="MKLIIIDTACANLASLKFCLDRLGFNAKISRDLKDLENADKLFL
                     PGVGTAAKAMSNLESFNLTNFIKNTKKPLLGICLGMQILGNFSEELNQETLKLIDFTT
                     QKFKAKEGFTFPHMGWNQVHSSHALFKGLEGAYFYFVHSYCVGLGEYTIADCEYSQKF
                     SASVMKDNFYGVQFHPERSSEAGEILISNFIKDIG"
     gene            11618..12349
                     /gene="hisA"
                     /locus_tag="R8X70_000783"
     CDS             11618..12349
                     /gene="hisA"
                     /locus_tag="R8X70_000783"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEF2928578.1"
                     /translation="MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAG
                     AKELHLVDLTGAKDPSKRQLALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVV
                     IGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY
                     SNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFPHICIQASGGVASLKDLENLKGIC
                     SGVIVGKALLDGVFSVEEGIRCLVN"
     gene            12334..13290
                     /locus_tag="R8X70_000784"
     CDS             12334..13290
                     /locus_tag="R8X70_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrgA protein"
                     /protein_id="HEF2928579.1"
                     /translation="MSSKLSYKELALEILKQSDKPLNANEIWQKALEKGLDKKLSSIG
                     QTPIATLGARIYVDIKELQHNSLFIKASQKPRTFWLKERENELLKLDDKNEITNEKQE
                     KNKFHERDLHPLLVKFLYENLDFNLNCKTIYHEQSKKGKGGEDKWNYPDIVGVYFPYD
                     DYEKETITLLENIKQNSYKLFSFELKIALNFSNLKECYFQAVSNSSWANEGYLVVLQE
                     IDSEVLSELRRLNQSFGIGVIKLEKDISNSQILISAKEKELDIQTLNMLINKNPNFKE
                     FIDDINKQIKVGKEAKIQANFDEIKSDEEMEKYLKEKCILEK"
     gene            13291..14058
                     /gene="hisF"
                     /locus_tag="R8X70_000785"
     CDS             13291..14058
                     /gene="hisF"
                     /locus_tag="R8X70_000785"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEF2928580.1"
                     /translation="MLTKRIIACLDVKDGRVVKGTQFKNHKDMGDIIELARYYSQNGI
                     DELVFYDITASARKERISREWVSEVAKNINIPFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPSLTTRLAKSFGVQCVVVGIDSFKDENGNLKVFQYTGDEKTSKHSGKSTLE
                     WVKEVQDLGAGEIVLNMMNQDGVKNGYDLEQLEAVYKICKVPLIASGGAGKMEHFLEA
                     FELGIDGALAASVFHQKLIDIKELKIYLKNQGLSIRI"
     gene            14060..14683
                     /locus_tag="R8X70_000786"
     CDS             14060..14683
                     /locus_tag="R8X70_000786"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HEF2928581.1"
                     /translation="MQNFKELNEKIAWQKVDHLLPVIIQDAKTCEVLMLGFMNNEALE
                     KSLESGKVVFFSRTKQRLWMKGEESGNFLNIVDLSLDCDNDTLLILVDPIRATCHIGN
                     ISCFENVSKNADFVFLARLEKLINSRKNADENTSYTAKLFKKGTKRIAQKVGEEGVET
                     ALAATVKDKDELICEAADLMYHLSVLLADANLSFSDVIAKLKERHKE"
     gene            14685..15251
                     /locus_tag="R8X70_000787"
     CDS             14685..15251
                     /locus_tag="R8X70_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928582.1"
                     /translation="MKNIILGFLIFFIYPALMMFFILMHRKYISEVPMLGFHTNMEIF
                     KRAGIYYFYLLVIHIPLFLVWKKVISRIESLDFINTFYFGIAFSLCVFFLLTLPLDGH
                     LALVPLLCVLFSFVFVFKFIYFCFKKISYFTWKKLIFIITTLLGICAGLAYIFFCLYY
                     QLYIFDNYDFLGKFYNIPSYKRPLNFIF"
     gene            complement(15309..16469)
                     /locus_tag="R8X70_000788"
     CDS             complement(15309..16469)
                     /locus_tag="R8X70_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-carboxylate
                     N-succinyltransferase"
                     /protein_id="HEF2928583.1"
                     /translation="MINTKEDFLLLIKQIEQKNGYRKPKAFGIARLDRGQLNKNKILQ
                     ASFALVNYEQNFGSAAIMLEAFMQRGVEIDFEASEFVQILKLEDIDYALACFKPFLEE
                     EGHKNIDILKIIKDKFKDDEFAFVCLFEDKEPLSVESVYLKLYLLSTKKVPLRSLNLN
                     GAFGLLSNVAWSDDKPIELEYLRENEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFLLKDREEL
                     AKLNPYFDFSKEIYKGIELKGLNGLHFRQDSISGAMIVSLNKKAIKLNEALH"
     gene            complement(16491..17597)
                     /locus_tag="R8X70_000789"
     CDS             complement(16491..17597)
                     /locus_tag="R8X70_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEF2928584.1"
                     /translation="MKEQILEKLKSVKYPGFDKDIVSFNFVKDIKTENENVIVELEIV
                     SSNPQVSEELRKNIDEALASLNLKNLQIHIITPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILSHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPITAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTAEDMAKAYKSEVLAQIPIEMIVREGGDEGKPVSFYHPESVSAKRYLMA
                     AEKIWQFIEKINNEGGADNSAIQPVMNGKSACSH"
     gene            17717..18832
                     /locus_tag="R8X70_000790"
     CDS             17717..18832
                     /locus_tag="R8X70_000790"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HEF2928585.1"
                     /translation="MANLSLIMLAAGNSTRFDMGVKKQFLRLGDDPLWLYATRNLSTF
                     YPFKKIVVTSSNTSYMKKFARNYEFVEGGATRAESLKKALEIIDSEFVMVSDVARVLV
                     SKSLFDRLIENLDKADCITPALKVADTTLFENEALQREKIKLIQTPQISRTRLLKQAL
                     NQNLDFTDDSTAISAVGGKIWFVKGEENTRKITFKEDLKKLDLPRPSNEIFCGNGFDV
                     HEFGEERPLLLGGVEIHPTMGLKAHSDGDVLAHSLTDAILGAACLGDIGELFPDTDEK
                     FKNANSMNLLKEAYKRVKEFGFELVNIDICVMAQTPKLKDFKEAIAQNIANTLNVDEF
                     RVNIKATTTEKLGFIGRKEGMAVLASANLKYFDWTKI"
     gene            18829..19716
                     /locus_tag="R8X70_000791"
     CDS             18829..19716
                     /locus_tag="R8X70_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEF2928586.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDVGYSCEITNSFDERNPEKYYDI
                     VLLSTNTSNFLKAVTEFKHSIIILLISYISTDTVSNPLKLGACDYIQKPFMIEELIRK
                     IKHYQDFKKLSILNKAYKSYIKSRLQTVKIPEYNYKKLKLPVVLKSNKQSSADAFVFN
                     YINEYDITLSYVDLSVSNSVEKAMKLPTENNLLFLSNFQVLKPLEREKLLEFIKNKSV
                     ILHTNSNIEDLELPCINLSDNEKNIDSNQILTIDEYVKYIILNYQNVFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            19694..20854
                     /locus_tag="R8X70_000792"
     CDS             19694..20854
                     /locus_tag="R8X70_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HEF2928587.1"
                     /translation="MKSAKKNKSIIIDKNELGILSLIKEGLLGSCTHLMDEHETKQIF
                     KTGKSNNESFPYPLSFAPKVSEEFIKDIRIGSKIDLILDDEIVGNITLKSKFKNDKNF
                     SNIFSPHTCSLDDMGEICIGGEIEIYNSTIQKIKEEFHKTKENLNAHKITAIVSSFDP
                     LHRAHERMFRWTIDKADLVVVFLVESFDANGFDFDLKQNYLKKFIQNYLPPDRIFIFP
                     LKDINLFHAHLNPSLESILAKSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYD
                     IEVIVLPEFVFCDACRMIVSTRSCPHGCHHHLHYNSQSLKELLRAGIVPPAVFMRKEV
                     SSIILSSIFPNRFKNLQKIYNDLFATDGILEYKSDEEFYQKLLETHQMSYMV"
     gene            20864..21364
                     /locus_tag="R8X70_000793"
     CDS             20864..21364
                     /locus_tag="R8X70_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEF2928588.1"
                     /translation="MQKLFLTFFYSGCAKKAPGTFGTLAALIPAFFILKYLGITTLFL
                     LSILIFIASIRVIDDYERKTGIHDDKHIVIDEVAGVFLACAIAASGANSLLNFFMAFV
                     FFRIFDITKPSIIGKIDKKTKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFDLVFWDK
                     DLINLF"
     gene            21441..21704
                     /gene="rpsT"
                     /locus_tag="R8X70_000794"
     CDS             21441..21704
                     /gene="rpsT"
                     /locus_tag="R8X70_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEF2928589.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAAKNDK
                     NAANEALKIANKSIHAMVSRGFLKKQTASRRVSRLALLVNKIA"
     gene            21721..22788
                     /gene="prfA"
                     /locus_tag="R8X70_000795"
     CDS             21721..22788
                     /gene="prfA"
                     /locus_tag="R8X70_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEF2928590.1"
                     /translation="MLASKLDPFLKRFEELNSLLSSSDIISDISKMTALSKEQKNLEP
                     IVLKAKEYLKTLDSIEENKTLLNDAELGELAKEELKNLEELKPKLEEELKILLLPKDP
                     NDERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEII
                     MLVKGAGAFSRLKYEGGTHRVQRVPQTESQGRIHTSAITIAVMPEVDDIEIEINPNDL
                     KIDVMRSSGHGGQSVNTTDSAVRITHLPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAQESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAILQDGLF
                     DEVIEPLIAHYQAESLQEQNL"
     gene            complement(22819..23574)
                     /locus_tag="R8X70_000796"
     CDS             complement(22819..23574)
                     /locus_tag="R8X70_000796"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HEF2928591.1"
                     /translation="MSFESIISHMNDHHQSNLIDLCKKFGAVKDPKGVRLVGVDFEGL
                     DIAYNDKENLRIEFPKKANEETLKDAIIELCMSAKTKKDLSGVAREAKEFMLSFNSVS
                     LATLSADKEVVCSYAPFVNTPWGNYIYISEVSEHFNNIKENPNNIEIMFLEDESKAAS
                     VILRKRLRYKVKASFIERGEVFDKIYDEFEKQTGGEGGIKTIRNMLDFHLVKLEFQKG
                     RFVKGFGQAYDIENENVTHVGANSSPHKFPHKH"
BASE COUNT         8766 a         3503 c         4057 g         7390 t
ORIGIN      
        1 ggaattttta cgagaactta acgatgaatc gttagataat ctagtgtcta tcttaattaa
       61 agatgaaaat ggaaaaacta gaacaacaga gagtttgacc aataaggatt tgtataaaaa
      121 acattaatcc taatcatggt caatatttag acttgatttt agaagaactt caaacttttg
      181 gtggaaatac atttgcaaat aaaattagag gaactggagt tgtctataaa gaaattttat
      241 gtgatgttgc agataattta aaagtcaagt atgataaaag tgcaagtata gaaaatatag
      301 aaaaagcgat tttacttaat tcttttaata aatcattaga gaatttatca gaaagtgatt
      361 tgaaagaaat tgcaaaagat ttttctatag atgttaacac ttacacaata gagtctattt
      421 ctaatgctat cgcaaaaact aataatctta aattacttta tcaaattgca atgttagttg
      481 taaatgccat agcaagtaag gttgcaatta atacagctat atttacaaca agtagtttga
      541 tagcaggaag tggtttagtt ggaagtgctg caatttctgg tgtattagga agtactgcga
      601 catttttagg ttcacgagct gtaggaactt tagcaggacc tattggaatg ataatctcaa
      661 gtgcgtggat gataaacgac attgcaggtc ctgcttttag agttacagtt ccagcagtga
      721 tttatgtcgc atttttaaga agacaatttt tatacgaaaa ggagatgatt aaacaaatgg
      781 aagcagaaca aaaagaaaaa gtaagcaatt taaataaagg taaaaaatat tctgcgactg
      841 agctttttaa tcaagagctt aatattttaa tagttggtgg cacaggtgca ggaaaaagct
      901 ctacgataaa agctcttttt gaaacagaag gttataatct tgatatagaa ataaatagtg
      961 gtggcaaacc agttacacaa gaaatcaaag aatataaatt aggcaatcta acaatttatg
     1021 atagtccggg attgggagat tcaggagaaa atgataatga gcatatgaaa aaaataaaaa
     1081 atttgctctt ggaaaaggat agcaaaggaa atgctaagat tgatctagtt ttagtagttg
     1141 ttgccgccac agttggtaga gatttagagt caacctataa aaccataaaa gaagcaatta
     1201 tgccttatat ggaagaaaaa gaaaggattt taattgcatt aaataaatgt gataaagcag
     1261 gcgctgatga agacattgag tttgataaag aaaataatca attaactcca gagttagaag
     1321 agattttgga agaacaagtc aaagcaatta aagaaaggat taaaacagat acaggggttg
     1381 atgtcgatgt aatatattat gcagcaggtt ctacttcaaa aaagacaaaa attaaaaaac
     1441 cagcatacaa tcttaataaa cttctagcat atattgttgc taaggcacca ttgaaaaagc
     1501 gattagtttt cttaaaacac caatcaagaa atcaagatga ttttaaatat ggtgataata
     1561 aagaaaatta cacagaagaa atggtaaaat cttttattga aacaataaaa gaatatgcaa
     1621 agaatgtatc tgattttata atagaagtaa agaatttttt tacttcagat aaaggcaaag
     1681 aggtagtggg tgtagttaag gatgtttttg aaggaattgt gtcaatcttt ggtaagagaa
     1741 aataatgttt tctaaaatcc tttctgcctt gtctttagca aatagtttta aagctatgat
     1801 ttttaaacgc ttatcaagtc ctgtccaaag tgcctatttg ggttctttgg tgtgggatat
     1861 aataaatatc cttaatagag atcaacaaga ttcagaaaaa atttgtcaaa ttttagattt
     1921 gcttagtgat tttaaaaaca agcatcctga agactttgat aaaattgtcg atattttaaa
     1981 agagatttta gatgagtatg aaaaaaatcc aagcgaagtt aagaaaaatt tgaaggaact
     2041 tttctaatat gcaaaatctc ttaattctct ataatcctta ctatcaacaa gatgttataa
     2101 aattgcattt agaaatttta ttagacaaag gtcaggtagc atttggtaaa ataaaatcta
     2161 aactaaaaga gccactttct tatgaaaggg atgaaaataa aatctcacac aatcaaaaac
     2221 tatcagaaat ttacaaaaat acctctgctg ataatccttt gcaacttttt ttgagtgatt
     2281 atgcaaattt atttgtagca aaagtagtaa aaataagtaa agaagtagat aaaaatatca
     2341 ttccaaaata ttaccaagag aaaaatttag aagtggagga ttatttctta atcatagatt
     2401 taagagaatt agtaagagaa aatttcacac tcataagaga taaatttttg gcaaatttca
     2461 caacagaaaa taaccacact tatgcaattt atggcaataa ctattcttat cctttggtag
     2521 tcaaacaaaa agaggaaatt aattattttt atgatgagat aaacaaatac tacctgagcg
     2581 tttataaaaa tcaagagtat ttaaaaatgc aagaaaattt tatacaattt atctttggta
     2641 aaaaattttt ttatatgcta catcctgata gtatcaataa ccttatccta gcagagctag
     2701 aattgcaaca aaacttagaa aatccacttt atgacttcac ttcaataata gtaaaatact
     2761 ctaaaactat agaatatgaa atatatgact ttgccaaaaa gatatttaca aaactcatca
     2821 agcaaaattc tcatctttcg tccataagtt atagtataca aggaaaagaa tttaacttta
     2881 agcagttttt cattaataaa cctaatttag gaacaattaa atttttactt aaaaatagag
     2941 aaattcaaga gcttttagac agagatgtaa aaggatttat taattatgaa tttaataaaa
     3001 ctttagatga atttcaaacg atacgaaatc atgcagtgca tgcaaaatca ccgactttag
     3061 aacaaacact aaaaattcga aatttaattt taggtataga aaatactagc attttaaaac
     3121 gcgtattaga gtataaattc aaacaaaaag gataaaaatg ataagaccaa agccttttct
     3181 taaaaaatgt ccaaagtgtg gaaaaatgtt tttatgtgct cctaagagtg attgcttaaa
     3241 tccaagtgat tttttctgcg ataaatgtag cggcaaaaaa gatacaagct tgataagtaa
     3301 aattatttct gtaattaaaa aggtttaaaa tgtctcacga taaacttgca gtgcgtttag
     3361 cgcaaatttt aatgcgtttt aataatggag gaaggtttag cctagaagaa ttagcaagtg
     3421 aatttaatgt agatgttaga accatacaaa gagatttaaa ccaaaggctt tcttttatgc
     3481 ctattaaaaa agaaaatgga aagtattttt tagaatcttt tgcactcggc aaacttagtg
     3541 ttaaagatat acaaaatttt gccatgttaa gcgggattca agaactttat ccaaagctag
     3601 atgaggattt tataacagat ttgctaaact ctaaagtaaa tagcattttt atgataaaaa
     3661 acaatggctt tgaaaaagtt gattatgaaa attttaaaat catcagtgtt gcgattttaa
     3721 aacacaatat tttaaatttt aactataaag aaaaaagtcg tgaagtcaaa ccttataagc
     3781 ttttaaacta tcaaggaatt tggtatttaa tagctgatga aaaggataaa ttaaagcatt
     3841 ttacttttag caagattaaa aatattcgca aaaatgatga aatctttacc cctaaagaag
     3901 aatttttaga ccaaattcta aatgataaaa atatttggct agatgatagc aaagaagcta
     3961 tcgtaaagct tgataaaaag gctaaagagt atttttttag aaaaaatatt ttaaacaact
     4021 ttgaactcat cgatgaagat gagcaaagct atactctaaa agtatatttt tcctatgatg
     4081 atgagcttct aaatgtagta aaacaatgga taccctatat gaagatagaa aaaccttttg
     4141 aactgaaaga aaaactagat agcattttaa aagactactt ggaaaactaa tttcttaata
     4201 aattcaaata ttttttgcta taatcacagt tttattttaa tgagaggaga aaattttggc
     4261 aaaagacgat gtgattgaaa tcgatggcac agtgcttgaa gcattaccta atgcaaattt
     4321 taaagttgaa cttgacaaca agcatgtgat tttatgtcat atagcaggaa aaatgcgtat
     4381 gcactatata agaatcatgc caggggataa agttaaagtt gaacttacac cttatagcct
     4441 tgataaaggg cgtatcactt ttagatataa ataatataag ttatttaaaa gctaatttta
     4501 gataaaatta gcgtttttgc gacaaaatgt atcgaactat atgaagaggt atttttaaaa
     4561 ttcaccactt attttaaaaa tagttggtta ttcataaaac ctgatgcagt cgtaaatgaa
     4621 gtggaattca tttaaggaga actcatgaaa gtgagaccat cagttaaaaa gatgtgcgac
     4681 aagtgcaaag tagttcgccg taaaggcgta gttcgcatta tttgcgaaaa tccaaaacat
     4741 aaacaaagac aaggataaac atggctcgta tcgcaggtgt ggatttacca aagaaaaaaa
     4801 gaattgagta tggacttacc tatatttatg gtataggact tttcacttca agaaaaattc
     4861 tagataaagt aggaatttct tatgataaaa gagtgcatga actaagtgaa gatgaagcag
     4921 cagctatcag aaaagaaatc caagaaaact atatggttga aggggattta agaaaacaag
     4981 ttgctatgga tataaaagca cttatggatt taggaagctt tagaggctta agacacagaa
     5041 aaggcttacc agttcgcgga caaaaaacaa aaacaaacgc aagaactaga aaaggtaaga
     5101 gaaaaactgt tggtgcaaaa tcataaggat aaatcatggc aaaaagaaaa atcgtaaaga
     5161 aaaaagtagt taaaaaaaat atagcaaaag gtattgttta tatcagtgca acttttaaca
     5221 ataccatggt aactgttaca gatgaaatgg gaaatgctat cgcttggagc agtgcaggcg
     5281 gtttaggatt taaaggttct aaaaaatcaa ctccttatgc agcacaacaa gcagtagaag
     5341 acgctttaaa taaagcaaaa gaacacggaa tcaaagaagt aggcattaaa gtacaaggac
     5401 caggaagcgg tagagaaact gctgttaaaa gtgtaggtgc tatggaagga atcaaagtaa
     5461 ctttcttaaa agatattact ccattagctc ataatggttg cagaccgcct aagcgtcgtc
     5521 gtgtctaaga tataagaaaa aattaggaga attaattatg gcaagatata gaggaccagt
     5581 agaaaaatta gaaagacgct ttggtgttag cttagcatta aaaggagaaa gaagactagc
     5641 cggaaaaagc gcattagata aacgccctta tgcaccagga caacacggag caagaaaagg
     5701 taaaatcagc gaatacggac tccaattaag agaaaaacaa aaagctaaat ttatgtatgg
     5761 agtaagtgaa aaacaattca gaagactttt tgcagaagct gctagaagag atggcaatac
     5821 aggggtttta cttatccaac ttttagagca aagacttgac aatgtagttt atagaatggg
     5881 ctttgctaca actcgtcgtt ttgcaagaca acttgtaact catggacaca ttttagtaaa
     5941 tggaaaaaga gtagatatcc ctagctttag agtagaagca ggagcaaaaa tcgaagtaat
     6001 agaaaaaagc aaaaataatc ctcaaatcac aagggcgatc gagcttactg ctcaaacagg
     6061 tatcgttgct tgggtagatg tggaaaaaga taaaagattt ggaattttca ctagaaaacc
     6121 tgaaagagaa gaagttatca ttccagtaga ggaaagattc atcgttgagc tttactctaa
     6181 gtaatagggg ctaaatcatg agaaacatta caacatctgc ttatacgccg acagaattca
     6241 ctatagaaaa tattagtgat agtgtggcta aaatcagtgc ttggcctttt gagatcggct
     6301 atggtattac cctagcccat cctttgcgcc gtttacttta tactagcact ataggttatg
     6361 ctccaaccgc tatccatatc gatggtgtag cgcatgaatt tgatagtatg cgtggtatgc
     6421 ttgaagatgt agcacttttt atcatcaatc ttaaaaaatt acgattcaaa cttaaaagcg
     6481 attccaacaa agaaatcgtt gagtttagtt tcaaaggccc taaagaaatt tatggtaaag
     6541 atctaaacaa cgatcaagtt gaagtcgtaa atacagatgc atatttagca acgatcaatg
     6601 aagatgctga acttaaattt actcttatca tagaaaaagg cattggttat gtaccaagcg
     6661 aagagattaa agagctttta aatgatccaa aattcatagc tcttgatgct tttttcactc
     6721 ctgtaagaga ggcgacttat gatattgaga aagttttatt tgaagacaat cctgactatg
     6781 aaaaagtagt tttaacagta actactgatg gacaaatcac tccaaacgaa gcttttcaaa
     6841 atgctttaga agctatgtat aagcaattat cagtatttga taagattaca aatgttagaa
     6901 gcatcataaa aagtcaagct acaagcaatg aattagaaaa tactaaatta ttgcaaaata
     6961 ttactgatct aaatttaagt gcaagaagtt acaattgcct tgaaaaagca ggaattgttt
     7021 atatcggaga gcttgcttta atgagcgtta atgaacttgc tggacttaaa aatttaggca
     7081 aaaaatcttt agatgaaatt aaaagcatta tggaaagcat aggcttccct gtgggtactt
     7141 ctaagcttag tgataataaa gatttgctta agaaaaaaat cgatgaatta aaagcacaaa
     7201 acgaaggata aagaatgaga cataaacacg gatatagaaa acttggcaga acttcatctc
     7261 atcgtgctgc cttgttaaaa aatttaacta tagctttagt taatagcggt aaaatcgaaa
     7321 caactctacc aaaagctaaa gaattaagag gctatgtaga aagattgatt actagagcaa
     7381 gacttggaga ttttaacgct cacagagcag tttttgctgc tttacaagat aaaaatgcta
     7441 caaataaact tgttacagaa atagctccaa atttcaaaga aagaaatggt ggctatacaa
     7501 gaattatcaa aacaagaatt cgccgcggtg acgcagctga aatggctttt attgaatttg
     7561 tagcctaaaa attccagctt aagctggaat tttaaaattc atttttctta tatttttcta
     7621 atttactcca actttttata aatctaaaaa ttcaaaatca tcttttaaat ccaattctaa
     7681 aaataaaaat tcttaaatga ttatttaaaa aataattttt agccaaattt ttaactactt
     7741 atgctaatat aattttttat ttttataaat gcaaggatat aaaatatgca agaaaattct
     7801 cgtttgcgta tagctataca aaaatcaggc agactctcta aagaatccgt agaactttta
     7861 aacaaatgcg gaattaaaat gcatatacat gagcaaagtc tcatagcttt ttcaaccaac
     7921 ctacctatag atattttaag agttagagat gatgacatac ctggtcttat ctttgatgga
     7981 gtcgtagatc ttggcattat aggcgaaaat gttttggaag aaaatgaact cgaaagaaaa
     8041 agcttaggcg aggaagcaaa ttacaagctt ttaacaaagc ttgattttgg ttattgtaga
     8101 ctttcacttg ccttgcctca agagaaaaaa tttgataatt tgaaagattt tgaaaattta
     8161 agaatcgcca cttcttatcc acagctttta aaacgcttta tgaaagaaaa caacattcat
     8221 tataaaaatt gtatgcttac aggttcagtt gaagtagctc caagagcaaa tttagccgat
     8281 gcgatttgtg atcttgtttc aagcggtgca acactacaag caaacaatct taaagaagtt
     8341 aaagttattt accaatctcg tgcttgtttg atacaaaagc aaaatactct aagcgatgaa
     8401 aaacaagctt tggttgataa aatcatgctt cgcgttgcag gagtaatgca agcaagggaa
     8461 agcaaataca tcatgcttca tgctccaaaa gaaaaacttg ataaaatccg atccctactt
     8521 ccaggcgtag aaaagcctac tatcttgcct ttagcacacg atgaaaaaaa tgtagccttg
     8581 catatggtaa gtaaagaaaa tcttttttgg gaaactatgg aggccttaaa agaagaaggt
     8641 gcgagttcga ttttggtttt acctattgaa aaaatgttaa agtgagtaaa aaatgcaaat
     8701 aataaatttt aacgaattag acgaaaaaca aaaacaagaa gtattaaaac gccctgcaat
     8761 agcagcaaaa gatgaaattt cacagatagt gagctctatc atcaaagaag ttagagaaaa
     8821 aggcgatgaa gctttgatag aacaagcttt aaaatttgac aaagcccaaa tttcaagcat
     8881 taaagtaagt gaagaagagc ttgaaaacgc aagcttacgc ttgaataaag acttaaaaga
     8941 agcgatttta atcgcttatg aaaatatcaa aaaattccac gaagcacaaa ttccaaaaga
     9001 aatagccatt gaaaccacca agggtgtaaa atgcgaagtt ttaacacgcc ctattgaaaa
     9061 agtaggactt tatataccag ggggtttggc gcctttattt tcaacggttt taatgctagc
     9121 aattcctgca aaaatagctc aatgtgaaaa aatcgttttg gcaagccctg ctaaaataaa
     9181 cgatgccaca cttttttgcg ccaagctttg cggagtagat gaaatttatc aaatgggtgg
     9241 tgcaggagcc atagcagcac tagcttatgg aaccaaaagc gttttaaaag tagataaaat
     9301 ctttgggcca ggcaatgcct ttgttaccga agctaaacgc caagtaagta gtgatataaa
     9361 cggagctgct atagatatgc aagctggacc tagtgaagtt ttagtcatag cagatgagaa
     9421 agcaaatgtt aaatttgtag caagcgactt gctttcacaa gctgaacacg gcgcagattc
     9481 tcaagtgatt ttagtatgct taagcaaaga atttgcacaa ggtgcgagtg atgaagtaag
     9541 ccgccaactt gaaaatttac caagaaaaga attagcgtct aaaagcattg caaattctaa
     9601 aatcatcatt gcaaaaaact tagatgaagc tcttttaatc tcaaatcttt acgcacctga
     9661 gcacttaatc atacaaacac aaaatcctcg cgaactttta gataaagtca aacacgctgg
     9721 atctgtattt ttaggtgagt taagtccaga atccatgggt gattacgcaa gcggaacaaa
     9781 tcatgtcttg ccaacttatg gacttactaa aacgcattct agcttgggtt tagctgattt
     9841 tagtaaaaga atgagcgtac aagaacttag caaagaaggc tttttaaatt taggaaaaag
     9901 tgttgaaatt ttagctgcaa atgaacattt agacgcacat aaaaatgcag taacttttcg
     9961 cttagaaagt ctaaaatgag tgaaaaaatc ctttttatcg atagagatgg caccatcata
    10021 gaagaaccaa agagcgattt tcaaatcgat agccttgaaa aacttcgttt tgaaaaaggt
    10081 gctatcccta ctcttttaaa acttaaaaat tttggcttta aatttgtgct tgtttctaat
    10141 caagatggcc ttggaactca aagctttcct aaagaagatt ttgaaatagc acatcaaaaa
    10201 atgttggata ttttacaaag ctgtggtata gaatttaaag acattttcat ttgtccacat
    10261 tttgaaaatg aaaattgcga gtgtagaaag ccaaaaaccg cccttttaga tgagtatatc
    10321 aagcacaatc tttacaataa agaacaaagc tttgtgatcg gtgatcgaga tactgatatg
    10381 atcctagctt caaatttggg tgttcgtggg ttaaaataca gcgagaattt gacttggaaa
    10441 gagatagaag aagagatctt aaattccttt cgcaccgcaa gcatttcgcg tatcactaaa
    10501 gaaaccaata tccatgtaaa agtatgttta aatggcggaa agattgctat taatacagga
    10561 gttccttttt tcgatcatat gcttgagcaa atcgcagtac atgggggcat aggacttgaa
    10621 atttcttgca agggcgattt agaaattgat gagcatcata gcgttgaaga tgttgcttta
    10681 gctttaggaa gtgccataaa acaagcttta ggagataaga taggcatcac aagatatggc
    10741 tttgtcttgc ctatggatga gtgtttggca agttgtgcga tcgatttttg caaccgtccg
    10801 catttggttt ataaagccaa atttaaaaag gaaaaattag gcgaattaag tactgaaatg
    10861 atagaacact ttttttactc gctaagctac tcaatgggag tgagtttaca cttaaaggtt
    10921 aaaggtaaaa acgatcatca caaagccgaa gggcttttta aagcttttgc aaaagcctta
    10981 aaaatggctg taaaaattga aagtgaaaat ttagccagct ctaaaggggt aatatgaaac
    11041 tgatcatcat cgatacagca tgtgcaaatt tggcatcttt gaaattttgt cttgatagac
    11101 taggctttaa tgctaaaatc agtagagatt taaaagattt agaaaatgcg gataagcttt
    11161 ttttaccagg agttggaaca gcagcaaaag caatgagcaa tttagaaagc tttaatctaa
    11221 caaattttat caaaaatacc aaaaaaccct tacttggaat ttgcctagga atgcaaattt
    11281 taggaaattt ttctgaagaa ttaaatcaag aaaccttaaa actcatagat tttacaactc
    11341 aaaaatttaa agctaaagaa ggctttactt ttccacatat gggatggaat caagttcata
    11401 gctctcatgc tttgtttaaa ggcttagaag gggcttattt ttattttgtg catagttatt
    11461 gtgtaggact tggggaatac actatagcag attgtgagta ttcgcaaaaa tttagcgcaa
    11521 gcgtaatgaa agataatttt tacggggtgc aatttcaccc tgaaagaagc agtgaagcgg
    11581 gggaaatttt aatttcaaat tttattaagg atataggatg actcaaatca tacccgcact
    11641 tgatcttata gatggcgaag tggtacgtct tgtaaaaggg gattacgaac aaaaaaaagt
    11701 atataaatac aatcccttaa agaaattcaa agaatacgaa aaagcaggag cgaaagaact
    11761 tcatcttgta gatcttacag gtgcaaaaga tcctagcaaa agacaacttg ctttgataga
    11821 aaaattagct aaagaagtca gtgtcaattt acaagtaggt ggaggcatac gctctaaaga
    11881 agaagttaaa gctttgcttg attgtggagt aaaaagagtg gttataggat ctatggcgat
    11941 taaagatgcg actttatgtc ttgaaatttt aaaagaattt ggtagcgaag ctatagtttt
    12001 agccttagat acgattttaa aagaagatta tgttgtggct gtaaatgctt ggcaagaagc
    12061 aagcgataaa aagcttatgg aagttttaga tttttatagc aataaaggct taaaacacat
    12121 actttgcaca gatatttcaa aagatggcac catgcaagga gtaaatgtaa gactttacaa
    12181 acttatccat gaaatttttc ctcatatttg cattcaggca agtggtggag tagcgagctt
    12241 aaaagacctt gaaaacttaa aaggaatttg tagtggggtt atcgtaggaa aagctttatt
    12301 agacggagtt tttagtgtag aagaagggat aagatgtcta gtaaattaag ctacaaagaa
    12361 cttgctttag aaattttaaa acaaagcgat aagcctttaa atgctaatga aatttggcaa
    12421 aaagctcttg aaaaaggctt agataaaaag ctttctagta tagggcaaac tccaattgct
    12481 actttaggag ctaggatata tgtggatata aaagaattac aacacaattc tttatttatt
    12541 aaagcttccc aaaaacccag aactttttgg ttaaaagaaa gagaaaatga acttttaaag
    12601 cttgatgata aaaatgaaat taccaatgaa aaacaagaaa aaaataaatt tcatgaaaga
    12661 gatttacacc ccttgcttgt aaaattttta tatgaaaatt tagattttaa tttaaattgc
    12721 aaaacaattt accacgaaca aagcaaaaag ggtaagggcg gggaagataa gtggaattat
    12781 cctgatattg taggggttta ttttccttac gatgattatg aaaaagaaac cataacactt
    12841 ttagaaaata tcaaacaaaa tagctataaa cttttttctt ttgaacttaa aattgcttta
    12901 aatttttcaa atttaaaaga atgctatttt caagctgtaa gcaattctag ctgggcaaat
    12961 gagggctatt tggttgtttt acaagaaatt gatagcgaag ttttaagtga gttaagacgc
    13021 ttaaatcaaa gttttggcat aggagtgata aaacttgaaa aagatatttc aaattctcaa
    13081 attttaatta gtgcaaaaga aaaagaactt gatattcaaa cactaaatat gctgattaat
    13141 aaaaatccaa attttaaaga atttattgat gatataaata aacaaattaa agtgggcaaa
    13201 gaagcaaaaa ttcaagctaa ttttgatgaa attaaaagcg atgaagaaat ggaaaaatat
    13261 cttaaagaaa aatgtatttt ggagaaataa atgcttacaa aacgcataat tgcatgttta
    13321 gatgtcaaag atggcagagt agtaaaagga acacaattta aaaaccataa agatatggga
    13381 gatatcatag aacttgctag gtattattct caaaatggta ttgatgagct tgttttttat
    13441 gatattactg caagtgctag aaaagaacgc atttcaagag aatgggtaag cgaagtggct
    13501 aaaaatatca atatcccttt ttgtgtagca ggcggcatta aaagtgaaga agatgcagcc
    13561 gaactcttag ccaatggagc ggataaaatt tctatcaatt ctcctgcttt aaatgatcca
    13621 agtttaacca cacgccttgc taaaagtttt ggcgtgcaat gcgtggtagt agggattgat
    13681 agtttcaaag atgaaaatgg aaatttaaaa gtatttcaat acacaggcga tgaaaaaaca
    13741 agcaaacata gtggaaaaag cactttagaa tgggttaaag aagtgcaaga tctaggcgca
    13801 ggtgaaattg ttttaaatat gatgaatcaa gatggtgtta aaaatggcta tgatttagaa
    13861 caattagaag ctgtatataa aatttgtaaa gtacctttga tcgcaagcgg gggagcggga
    13921 aaaatggagc attttttaga agcttttgaa ctaggtatag atggggcttt agctgcttct
    13981 gtttttcatc aaaaacttat agacattaaa gaattaaaaa tttatcttaa aaatcaaggc
    14041 ttaagtataa ggatataata tgcaaaattt caaagaactt aatgaaaaaa tcgcttggca
    14101 aaaagtggat catcttttac ctgtcatcat ccaagatgca aaaacttgcg aagttttaat
    14161 gctaggcttt atgaataatg aagccttaga aaaaagctta gaaagtggca aagtagtctt
    14221 tttttcacgc acaaaacagc gtctttggat gaagggtgaa gaaagtggaa attttttaaa
    14281 tatcgttgat ttaagccttg attgtgataa tgatacactt ttgattttgg ttgatcctat
    14341 aagagctact tgccatatag gcaatatctc ttgctttgaa aatgtatcaa aaaatgcaga
    14401 ttttgtcttt ttagcaagat tagaaaaact tataaattca cgtaaaaatg cggatgaaaa
    14461 cacttcctat actgcaaagc tttttaaaaa aggaacaaaa cgcatcgcac aaaaagtcgg
    14521 cgaagaaggt gtggaaactg ccttagcagc gactgttaaa gataaagatg agcttatttg
    14581 cgaggcggct gatttgatgt atcatttaag tgttttactc gcagatgcaa atttaagttt
    14641 ttcagatgtc atcgctaagc ttaaagaaag acataaagaa taaattgaaa aatatcattt
    14701 taggcttttt gatctttttt atctaccctg cattaatgat gtttttcatc ttaatgcata
    14761 gaaaatatat atctgaagtg ccaatgttag gttttcatac aaacatggaa atttttaaac
    14821 gagcaggtat ttattatttt tatcttttag taattcatat ccctttattt ttagtgtgga
    14881 aaaaagttat ttcaaggata gaaagtttag attttataaa tactttttat tttgggattg
    14941 cttttagcct ttgtgtgttt ttcttgctta ccttgccttt agatgggcat ttagctttag
    15001 tgcctttgct atgcgtgttg tttagttttg tctttgtttt taaatttatt tatttttgtt
    15061 ttaagaaaat ttcttatttt acttggaaaa aacttatttt tataataact acattactag
    15121 gtatttgtgc aggtttagct tatatctttt tttgccttta ttatcaactt tatatttttg
    15181 acaattacga ttttttaggt aaattttata atatcccttc ttataaaagg cctttgaatt
    15241 ttatatttta atgaaaaata tggacaaaaa agcctaaaat taggcttttg tcgataatct
    15301 agggtaaatt aatgcaaagc ttcgttaagc ttgatcgctt ttttatttaa acttactatc
    15361 atcgctccgc tgatagaatc ttgacggaaa tgaagcccat ttaagccttt aagctcgatg
    15421 cccttataaa tctctttgct aaaatcaaaa taaggattaa gtttagcaag ctcctcacga
    15481 tctttaagta aaaatttcgt tccttcaagc actgcaattc ccgcatctac gatacaatta
    15541 tcacccaaag gaattcctgt tactgaattt gctcctaaaa gacaagcttt acctacactt
    15601 atagcatttc cacttgttcc gcttaaaaca cctaaaatag aagcaccacc gcccacatca
    15661 gagccttcac ctacgatagc acttgaactt atacgccctt caaccataca agcccctgtt
    15721 gttcctgcgt taaaattcac atagcttgca cctggcatga ttgtagtacc tgcagccaaa
    15781 gatgcaccca ttcttacttt agagctttct agaattcttg tattatcttc aggaatgata
    15841 tgtgctaaaa atcttgggaa tttatctaca aaatcaattt ttggatattg attgctcatt
    15901 tttaaacgca tttcattttc tcttaaatac tcaagctcga taggcttatc atcactccaa
    15961 gctacattgc ttaaaagtcc aaaagctcca tttaaattta aacttcttaa aggaactttt
    16021 ttagtagaaa gcaaataaag tttcaaataa acactttcca cactcaaagg ctctttatct
    16081 tcaaaaagac atacaaaagc aaattcgtca tctttaaatt tatctttgat aatctttaaa
    16141 atatcgatat ttttatgtcc ctcttcttct aaaaaaggtt taaagcaagc aagcgcataa
    16201 tcgatatcct caagcttaag aatttgtaca aattcgcttg cttcaaaatc aatctcaaca
    16261 cccctttgca taaaagcttc aagcataatc gccgcagaac caaaattttg ctcataattt
    16321 accaaagcaa aactggcttg taaaatttta tttttattaa gctgaccacg atcaagtctt
    16381 gctataccaa aagctttagg ttttctatat ccattttttt gttcaatttg cttgattaaa
    16441 agtaaaaaat cttctttagt attaataatc attttttctc cttcaaaatt ttaatgcgaa
    16501 caagcacttt ttccattcat cacaggttgg attgcagaat tatccgcacc gccttcatta
    16561 ttgatttttt ctataaattg ccaaattttt tcagctgcca ttaaataacg ctttgcactt
    16621 acactttcag gatgataaaa actcacaggt tttccttcat ctccaccctc tcttactatc
    16681 atctctatag gaatttgtgc taaaacttca ctcttataag cttttgccat atcttcagct
    16741 gttcctttac caaaaatatc atactctttg ccattatcag gacataaaaa gccactcata
    16801 ttttctatca cgccagcgat tggaatgtga agtttgttaa acatatctaa agctcttttg
    16861 ctatcatcta aagaaacggt ttgtggggta cttacacaaa cacccgcagt aattggaatg
    16921 ctttgtgctg aagtaatttg cgcatctcct gttcctggag gcatatctaa aaacaataca
    16981 tcaagttcag gccaaatcac atctgcaagt aattgctcga tagctttcat gatcatagct
    17041 ccacgccaca taagcccttg accctcttcg attaaaaccc ccatactcat catataaaca
    17101 ccatgactta aaatcggctt taatctttgt cctactactt caggttgagt tttagtttca
    17161 cctaacatcc ttgggatatt tggcccataa atatctgcat ctaaaatccc tactcttttt
    17221 cccattttag ccatagaaat agctaaattt acagtggttg tagacttacc tactccgccc
    17281 tttccgcttg aaaccatgat gaaatttttt acttgaggtg cgatattttt accacttctt
    17341 gaattgcttt tttcttcagg aatttttgga gtaatgatat gaatttgtaa attctttaaa
    17401 tttaaagaag ctaaagcctc atcaatattt ttgcgtaatt cttcgcttac ttgcggattt
    17461 gatgaaacaa tttcaagctc aacgataaca ttctcatttt cggtttttat atcttttaca
    17521 aaattaaaac tcactatatc cttatcaaaa cctggatatt ttacactttt taatttctct
    17581 aaaatttgct ctttcatctc ttttccttaa tttttaaaaa atcaatttta ctaataaaat
    17641 gataaaattt agctttttat aagtgtataa tatggtaaca ttatatataa aattaatatt
    17701 atagcaaagg gaaaaaatgg ctaatcttag cttgattatg ctagcagctg gaaattctac
    17761 tcgctttgat atgggggtaa aaaaacaatt tctacgcctt ggcgacgatc ctttatggct
    17821 ttatgctacg cgaaatttaa gcacttttta tccttttaaa aaaatagttg ttacttctag
    17881 taatacttct tatatgaaaa aatttgctag aaattatgaa tttgttgaag gtggtgccac
    17941 tagggcagaa tccttaaaaa aagccctaga aatcatagac agtgaatttg taatggtaag
    18001 tgatgtagca agagttttag taagtaaaag cttgtttgat cgtttgattg aaaatttaga
    18061 taaagctgat tgtatcactc cggctttaaa agtcgcagat accacgcttt ttgaaaatga
    18121 agccttgcaa agagaaaaaa tcaaactcat tcaaactcct caaatttcac gcactcgctt
    18181 actcaaacaa gccttaaatc aaaatttaga tttcacagat gatagcacag ctatatctgc
    18241 agtgggtgga aaaatttggt ttgttaaggg tgaggaaaat actagaaaaa taacctttaa
    18301 agaagatctt aaaaagcttg atttacctcg accaagtaat gaaatctttt gcggaaatgg
    18361 ttttgatgtt catgaatttg gagaagaacg ccccttgctt ttaggtggag ttgaaattca
    18421 tcctactatg ggcttaaaag cacacagtga tggagatgtt ttagctcact ctttaaccga
    18481 tgcgattttg ggtgctgcct gtctaggaga tataggcgaa ctttttcctg atacggatga
    18541 aaaatttaaa aatgcaaatt ctatgaatct tttaaaagaa gcatataaaa gagttaagga
    18601 gtttggcttt gaacttgtca atatagatat ttgcgtgatg gcacaaactc caaaacttaa
    18661 agattttaaa gaagccatag ctcaaaatat agcaaatact cttaatgtcg atgaatttag
    18721 agtaaatatc aaagctacca ctactgaaaa gctaggtttt atagggcgta aagaaggtat
    18781 ggctgtttta gcaagcgcaa atttaaaata ttttgattgg acgaaaatat gaaagtttta
    18841 attatagaaa atgaaattta tctagctcaa agcataagta ttaagcttag tgatgtgggt
    18901 tatagttgcg aaattaccaa ttcttttgat gagcgtaacc ctgaaaaata ttatgatatt
    18961 gttttacttt ctactaatac tagtaatttt ttaaaagcgg ttacggaatt taaacatagc
    19021 attattattt tgcttatttc ttatatcagc acagacacag tttcaaatcc tttaaaactt
    19081 ggtgcgtgcg attatataca aaaacctttt atgatagaag aattgatacg aaaaatcaaa
    19141 cattatcaag attttaaaaa gctctccatt cttaataaag cttataaaag ctatattaaa
    19201 tcaagacttc aaacagttaa aattccagaa tacaactata aaaaactaaa acttcctgtt
    19261 gttttaaaat ccaacaaaca aagctcagct gatgcctttg tatttaatta tatcaacgaa
    19321 tacgatatca ccctttctta tgttgatcta tctgtgagta attcagtaga aaaagcgatg
    19381 aaacttccaa cggaaaacaa tcttttattc ttgagtaatt ttcaagtttt aaaaccgcta
    19441 gagcgtgaaa aattgcttga atttatcaaa aacaaatcag ttattttaca tactaattca
    19501 aatatagaag atttagagct tccgtgcatc aatcttagtg ataatgaaaa aaatatcgat
    19561 agtaatcaaa ttttaaccat agatgaatat gttaaatata ttattttaaa ttatcaaaat
    19621 gtctttcctg atacagatct ttcaaagaaa ttaggaattt ctcgtaagtc tttatgggag
    19681 aaaaggaaaa aatatgaaat cagcaaaaaa aaataaaagc attatcatag acaaaaacga
    19741 actaggcatt ctttctctta tcaaagaggg tttgcttggc agttgtactc atttaatgga
    19801 tgaacatgag acaaaacaaa tttttaaaac gggcaaatcc aacaacgaaa gctttcctta
    19861 tcctctatcc tttgctccaa aagtttcaga agaatttatt aaagatattc gcataggaag
    19921 taaaatcgac ctcattcttg atgatgaaat agtaggaaat atcacgctta aaagtaaatt
    19981 taaaaatgat aaaaattttt ccaatatctt tagcccacac acctgctctt tagatgatat
    20041 gggtgaaatt tgtatcggtg gagagataga aatttataat tccacaatcc aaaaaatcaa
    20101 agaagaattt cataaaacca aagaaaatct taatgctcat aaaattaccg ctatagtttc
    20161 aagctttgat cctttgcata gagcgcatga aagaatgttt cgctggacta tagataaggc
    20221 ggatttggtt gttgtttttc ttgtagaatc ttttgatgcc aatggctttg attttgattt
    20281 gaagcaaaat tatttgaaaa aatttattca aaattatttg ccaccggata gaatttttat
    20341 cttcccactt aaagatatca atcttttcca tgctcattta aatcctagct tagaaagcat
    20401 tttggctaag agtcttggat gtaccaaact tgtcgtaggg caaaatcaca caggacttgg
    20461 aatgttttat gatgataatc agcctaaaac catactggat gatttttcta aagattatga
    20521 tatagaagtg attgttttgc ctgaatttgt attttgcgat gcatgtcgta tgatagtaag
    20581 tactcgatct tgccctcatg gatgccatca tcatttacat tataattctc aatccttaaa
    20641 agaattgtta agagcaggta ttgtgcctcc tgctgttttt atgcgaaaag aagtttcaag
    20701 tattatctta tcttctattt ttcctaatcg atttaagaat ttgcaaaaaa tctataatga
    20761 tctttttgca acagatggaa ttttagaata caaaagcgat gaagaatttt atcaaaagct
    20821 tttagaaact catcaaatgt cttatatggt ttgaaaggaa acaatgcaaa aacttttttt
    20881 aacttttttt tattcagggt gtgcaaaaaa agcaccgggg acttttggaa ctttagcagc
    20941 tttaattcct gcttttttta tattaaaata tctaggaatc actaccttat ttttactcag
    21001 cattttaatt tttattgcta gtataagagt gattgatgat tatgaaagaa aaacagggat
    21061 tcacgatgat aaacatatag taattgatga agttgcagga gtttttctag cgtgtgccat
    21121 cgctgcaagc ggcgctaatt ctttactgaa tttttttatg gccttcgtgt tttttcgcat
    21181 ctttgatatc acaaagcctt ctatcatagg aaaaatcgat aaaaaaacca aaggtggatt
    21241 gggtgttatg ctagatgata tgctagcagg attgtttgca gggcttttaa gtgcagtgat
    21301 ttatggtttt ttgcttaaat ttgatttagt cttttgggat aaagacttga taaatttatt
    21361 ttgaaatttt gcttaaatta atatattttt aaattttatt cttatataat ttagtcttta
    21421 atttcaaaaa aggaaaataa atggcaaacc acaaatctgc tgaaaaaaga gcaagacaaa
    21481 ctatcaaaaa aacagaaaga aatagatttt atagaacaag acttaaaaac atcactaaag
    21541 ccgtaagaga agctgctgct aaaaacgata aaaacgctgc taatgaagct ttaaaaattg
    21601 caaacaaaag cattcacgct atggtaagtc gtggctttct taaaaaacaa acagcgtctc
    21661 gtcgtgtaag tcgcctagct cttctagtaa ataaaattgc ataatctttc ataattttta
    21721 atgttagcta gtaaactaga tcctttttta aaacgctttg aagagttaaa ttctcttctt
    21781 agtagttctg atatcatcag tgatatcagt aaaatgactg cgctttctaa agagcaaaag
    21841 aatttagaac ccatcgtctt aaaagctaaa gaatacctaa aaactctaga tagcatagaa
    21901 gaaaacaaaa ctttgcttaa tgatgctgag cttggagaac ttgcaaaaga agagttaaaa
    21961 aatttagaag aattaaaacc caaactcgaa gaagagctta aaattttgct attacccaaa
    22021 gatccgaatg atgaaagaaa tatttttctt gaaattcgtg caggaacagg cggagatgaa
    22081 gcttctttat ttgtaggcga tcttgttaaa gcctatgcaa gatatgctga aaatcgtggc
    22141 tataaacttg aaatcgttag ttctagcgaa ggaagtgtgg gcggttttaa agaaattatc
    22201 atgctagtta aaggtgcagg agctttctca agacttaaat atgagggtgg aacacatcgc
    22261 gttcaacgcg ttccacaaac cgaatctcaa ggacgcatac acacttctgc tataactata
    22321 gcggttatgc ctgaagtaga cgatatagag atagaaatca atcccaatga tcttaaaata
    22381 gatgttatgc gctcttcagg acacgggggg caaagtgtaa atactacaga ttctgctgtg
    22441 aggatcactc accttcctac aggtatagtt gtagtcaatc aagatggaaa aagccagcat
    22501 aaaaataaag aaagtgctat gaaagtctta aaagcaagac tttacgaaat gcaagaaagc
    22561 gagcgtttgg ctcaagaaag cgaagcaaga aaatcccaag taggaagcgg cgatagaagt
    22621 gagcgcatac gcacttataa ttttccacaa aatcgtatca gcgaccatcg catcaatctt
    22681 accctatatc gtttagatgc tattttacaa gatgggcttt ttgatgaagt tatcgaacct
    22741 ttgatagcac attatcaagc agaatcatta caagagcaaa atttatagtt tcattagtct
    22801 tgaaaacaag actaatgatt agtgtttatg cgggaatttg tgcgggctgc tatttgcacc
    22861 aacatgggtt acattttcat tttctatatc ataagcttgt ccaaaacctt ttacaaaacg
    22921 acccttttga aattcaagtt ttacaagatg gaaatcaagc atattgcgta tggtttttat
    22981 tccgccttcg ccgcctgttt gtttttcaaa ttcatcataa attttatcaa acacttcccc
    23041 acgctcgata aaactagcct taaccttata acgcaatctt ttacgaagta taacagaagc
    23101 tgccttgctt tcatcctcta aaaacattat ttctatattg tttggatttt ctttgatatt
    23161 attaaaatgc tcgcttactt cactgatata aatataattt ccccatggag tatttacaaa
    23221 cggtgcataa gaacaaacca cctctttatc tgcacttaaa gtcgctaaag aaaccgaatt
    23281 aaaactcaac ataaactctt ttgcttctct tgccactccg ctaagatctt ttttagtctt
    23341 tgcactcata caaagttcga taatagcatc tttaagggtt tcttcgtttg cttttttagg
    23401 aaattctatg cgtaaatttt ctttatcatt ataagctata tccaagccct caaaatcaac
    23461 tccgaccaat cttactccct taggatcctt cactgcccca aattttttac aaagatcgat
    23521 caaattggat tgatgatgat cgttcatatg agaaataata ctttcaaaac tcattatctt
    23581 tatcctttct ttaaatttat agaacaaaat ataagttaaa aatggtatca attatcaaat
    23641 taaaaattac ttaaaaagat taaaatcgtt taattttcaa aaatttattc taatttaagc
    23701 ttataaaaga taaatt
//
LOCUS       DAQUWA010000024        22612 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.024, whole genome shotgun sequence.
ACCESSION   DAQUWA010000024 DAQUWA010000000
VERSION     DAQUWA010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22612
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.024"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            18..410
                     /locus_tag="R8X70_000797"
     CDS             18..410
                     /locus_tag="R8X70_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HEF2928592.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLTRLGHNDVLEAEHGVEAWDLLEKN
                     EDIKILITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGNGDSEAE"
     gene            424..1272
                     /locus_tag="R8X70_000798"
     CDS             424..1272
                     /locus_tag="R8X70_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEF2928593.1"
                     /translation="MQKFYYELFLEIQEQYKNLFLDFVFDLGVDAIEEKDNGIYIRSE
                     ENLEEFAWAIEIFAQKLSQRFNLKENIILHKSIEKKENKDWVEEYKKGIKPILIDNIY
                     IHTTWQEEKENYLNIKINPALAFGSGHHESTYGCVKFLQKFAKNNSRSLDIGCGSGIL
                     AIVMAKLGCKVEICDTDDLAIESALDNAKLNNVNFAQAWHGSVDKAEGLYDLVVVNII
                     ADVILILEKDIKKHLEDNAILILSGILDKYKTRVKEKFQDLELIDEMQINEWCSLVYK
                     NKTKEK"
     gene            1272..3218
                     /gene="ftsH"
                     /locus_tag="R8X70_000799"
     CDS             1272..3218
                     /gene="ftsH"
                     /locus_tag="R8X70_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEF2928594.1"
                     /translation="MNNNNNAPNNKGNPQGNNFFNKNPIFIFAIFAIVMIIVFKGFFD
                     GNGSLGGALNGTEVSKNVPYSELKKLIESGQINQVSIGQTTIKAVSSAQNTVYTTKKV
                     NDPEFVSLLDSKNIAYGAYSETNWFTDILFSWVLPIFIFFGIWMFLASRMQKNMGSSI
                     LGIGSSKKLVNSEKPKVKFNDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLL
                     VGPPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIV
                     FIDEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLD
                     AALLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLA
                     NIINEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINDKEKKIITYHECGHAL
                     IAETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEE
                     VFIGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLTGGQTIKDYSE
                     KMAESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGAKVRDIIKSYE
                     NENNLPTRLQEINEEHKEESKQAE"
     gene            3218..3832
                     /locus_tag="R8X70_000800"
     CDS             3218..3832
                     /locus_tag="R8X70_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEF2928595.1"
                     /translation="MGKYIAKEGHWFIVIVFILFVICWIFYSFSVLLFLFLLVLLFIF
                     RIPNRVRVCNDSKAILSPIDGRITRIENTFDKYLGESVEISIKNAFYDAGAFYTPFKM
                     DINDIALKHGLFLCSELKSARIMNENVSIFASSNGSNVVLRIYAGSFDRKLKLDNLSH
                     SLTVGDKMGFLINGTISILLPRDTRIHVGLGDELKSGSLLGYLA"
     gene            3842..4567
                     /gene="pssA"
                     /locus_tag="R8X70_000801"
     CDS             3842..4567
                     /gene="pssA"
                     /locus_tag="R8X70_000801"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEF2928596.1"
                     /translation="MNNNKSQFIYILPNLFTAASAFLGVISIIASIQGNYYMALLYII
                     FSLICDGLDGRVARLTKTTSKFGIEFDSLADLIAFGAAPAIFFYMVIGSEFGRYGSLI
                     TAFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYSYYYYDFLRAYGII
                     FLILQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIVFSFLYLYPLESLVILAS
                     LYVIYGIIRAIYTLIFSKFKMKA"
     gene            complement(4564..5361)
                     /locus_tag="R8X70_000802"
     CDS             complement(4564..5361)
                     /locus_tag="R8X70_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEF2928597.1"
                     /translation="MQKEFFNELEKILYEQNLDNKFENFAIFYDDFKSQKFIFNHEQG
                     SIFKTNINPALKLLHPTRIRRPKFVNSTHSLAKIVHSIAHIEFSAINLALDASYRFKN
                     LPQQFYIDWLEVADEEIKHFKLLNAALDELGYKYGDFAIHDNLEAVLEATKDCLSLRM
                     GVVHRGLEAKGLDANPFVVAKLESSNHPIKSLLKDVLHIILNDEIKHVSKGDNWWKFS
                     NQNNYDFIELCKMFNQFSLAGKKLNIEARIKAGFSKAECEAIAQFYA"
     gene            5525..5881
                     /locus_tag="R8X70_000803"
     CDS             5525..5881
                     /locus_tag="R8X70_000803"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HEF2928598.1"
                     /translation="MKKLNEEEARVILNKGTEAPFSGKYNNFYEKGIYLCKQCGSKLY
                     RSEDKFKSGCGWPSFDDEIKGAIKRLPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKN
                     IRHCVNSISLEFVKGE"
     gene            5885..6523
                     /locus_tag="R8X70_000804"
     CDS             5885..6523
                     /locus_tag="R8X70_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEF2928599.1"
                     /translation="MFSNVGSELYLMFFAGITLLAVLNPFGNLTQFLAMSDGLPLALR
                     KKLFRTILYTALAIVLAFLFSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTK
                     LATQSFDSYQEANEKEILRQSLIPMAFPMLVGPGTLASVIVISEDGGLDIAFGGVIIA
                     FIFMFALFHFAATIEKIVGKLILHVFSRIAQVFIVAMGCKMIIIGIKNIFNI"
     gene            complement(6609..7262)
                     /locus_tag="R8X70_000805"
     CDS             complement(6609..7262)
                     /locus_tag="R8X70_000805"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEF2928600.1"
                     /translation="MESSILYSKLMDAPKDAPVFLSQKLEPDFILKAYRFGLFPWTNK
                     PVTWWCPDPRCVLNPSEIHIQKNMKKFINLYQIKLDYDFLSLIHLCRNTRPQSWIDDE
                     FIENYYELFKQGYVHTLELYEDKELIGGIYGLIIGKVFFGESMVSLRKNASKIALIKL
                     CKLLKPYDFVIDCQVYNKHLEFMGAKNIERKTFLNILKEKCDQESGFTNFSTLINQI"
     gene            complement(7237..9354)
                     /locus_tag="R8X70_000806"
     CDS             complement(7237..9354)
                     /locus_tag="R8X70_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEF2928601.1"
                     /translation="MKYQENLQKYLDNAKHLSTINRHEFTTCEHVLFAILKLSSDFKS
                     IFEELADAEFELLESELKNYIAEKNQSLDQEIEPVNSIVLDEILNHKNEIKIIDFLEK
                     LIQDDRTYSSFLLQKHGMNLEKIQDFKQNSEIENLNSYASDLTLLAQKGKIDPLIGRK
                     FELERIIQILSRRKKNNPILIGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIFSLDI
                     AGLLSGTKYRGDFEKRIKEVLEGLQKLPNAILFIDEIHTIVGAGATGESHTDFSNLLK
                     PALSNGTLKCIGATTFMEYKNTFDKNKALSRRFAKINVDEPSQEEAFQILQGLKSKYE
                     DFHKIKISDEVLQQAVVWSKKFFSDKYLPDSAIDLIDELGASYVLKAKTKKNADIKDL
                     EQVLAKMTHHHKMFEFDQNKALMNLSLNLKAKIFGQDEVIDKLVATLKQSFAGFKNLN
                     TPRGVFLFTGSSGVGKTELCKVLAEFLGLNLERFDMSEYAEKHSISKLIGSPAGYVGY
                     EDGGLLSNAVRKNPFSLILFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKADFKNTII
                     IMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLDDTVLVKII
                     QKELDEISKNLKNIQLVADEKAKLYLAKKAYNKEFGVRLLKRIISEEIGEKISDEILF
                     GKLKKGGIAKIKLNKNGKLDLIF"
     gene            complement(9351..9641)
                     /locus_tag="R8X70_000807"
     CDS             complement(9351..9641)
                     /locus_tag="R8X70_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HEF2928602.1"
                     /translation="MPKLKVLEKSKLKEPKMFKVILLNDDVTTMDFVIEVLINIFYHD
                     FETANKIMLEVHLNGSGICGIYTQEIALSKQKKVSDAAKLANFPLQTRVEEE"
     gene            complement(9641..10246)
                     /locus_tag="R8X70_000808"
     CDS             complement(9641..10246)
                     /locus_tag="R8X70_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEF2928603.1"
                     /translation="MKKKTILSFFIIIGFFINACSHQEDIQNDFMFEEYSKGDKIVLN
                     SVNGGAKTLIRTDKGFIVEGEEDKVLMIDFFGTFCAPCKEEALELSKLWKNNSNKFII
                     MGLTHFEDVSDETVKKFADDYGAYYFLSNDSQNDRIIAQILKDIDYQSMEQLPFKVVM
                     KNGIYQNLSNYWDSNTSTNFYLGKIPTDFIQDDLDKIYKEK"
     gene            complement(10256..10708)
                     /gene="smpB"
                     /locus_tag="R8X70_000809"
     CDS             complement(10256..10708)
                     /gene="smpB"
                     /locus_tag="R8X70_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEF2928604.1"
                     /translation="MKVIARNKKALFDYSIIERFESGVVLKGSEVVALRAGRANLKDS
                     FVRIIKGELFLLNAHISHLSTTHSYYKHEERAARKLLMHRKQIDKLLGKVSIEGYTLV
                     VLELYFNHKNKVKATLALAKGKNLHDKRESLKKKQADMEARSAMKNYK"
     gene            complement(10705..11475)
                     /locus_tag="R8X70_000810"
     CDS             complement(10705..11475)
                     /locus_tag="R8X70_000810"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEF2928605.1"
                     /translation="MKAYAKANIFLKLVGFDKRRYHLLESRFILLKNLFDEIHIVEKS
                     SNSPKGFEIISNFNCEDNIITKAYHLLCQNGYQNKLEEFFKTKSLKLIKNIPTCAGLG
                     GGSSDCASFLMLINEELNLKLSTQKLIELSTQLGSDIAFFLSGFESANVSGCGEIIEE
                     FNDTIPSLEWVFPEVSCQTKKVYDEFDKREIDFEKNILEAKIYKDLNTKELLETFKNT
                     QLNDLFTPCVTLYPKMFLFLEQGFFLSGSGSSVFKVHK"
     gene            complement(11472..11699)
                     /gene="csrA"
                     /locus_tag="R8X70_000811"
     CDS             complement(11472..11699)
                     /gene="csrA"
                     /locus_tag="R8X70_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HEF2928606.1"
                     /translation="MLILSRKENESIVIGEGIEIKIVQTGKGYAKIGIDAPKSLMILR
                     KELLTQIKDENLHSVVKNDVKLDDLSKKLIP"
     gene            complement(11693..12511)
                     /gene="truB"
                     /locus_tag="R8X70_000812"
     CDS             complement(11693..12511)
                     /gene="truB"
                     /locus_tag="R8X70_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEF2928607.1"
                     /translation="MNKIFVAFKPAEMSSNAFLGQIKKRYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLFRFLKKTPKTYQATLWLGVKSLSLDNKNIQEIKLIKAFDIKLLEQIK
                     MELLGKISYTPPQFSAKRIEGKRAYEFAKRGENIELKSCIMEIFSCKIIHYTHPFLQL
                     ELSVSEGAYIRSYCELFAKKLGINATLSSLERTREGEFFYNHEKSLNVLKYLNLKPNF
                     IKDLTKLENGTKISLEELKFQDEGFYYIENKKYFSIINIKENKVEYLLNKVEKC"
     gene            complement(12508..14568)
                     /locus_tag="R8X70_000813"
     CDS             complement(12508..14568)
                     /locus_tag="R8X70_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEF2928608.1"
                     /translation="MNLFTGLNESQKEAASHIDGPMLILAGAGSGKTKTITTRLAYMI
                     GEVGIPAINTLTLTFTNKAASVMKNRALSLLNSNENPLLCTFHKFGLLFLKLHIERLG
                     RKNNFIIIDNDDSKKILKELINDDKTSPHQILQFISHFKNESKSVQDVFNDLELLKDN
                     EIKHQALQKIAIYYQNYQEYLLKHNFVDFDDLLLLTNILLENDQNFAKEQSSFYRYIT
                     VDEYQDTNALQYKILKNLCCVHENICVVGDDDQSIYSWRGAKIENILNFQSEFSNVKL
                     VKLEQNYRSVGMILKAANNLISHNKKRLGKTLLCTKDEGEDIQILSSDNEKIESALVA
                     KKIKELLNSGIYAGEIAVLFRINALSRSIEEAFMKEKIPYKLLSGMRFYERLEIKDLI
                     CYFRILINPNDDLSFKRIINRPKRSIGEKALQNLEDYAQKRKISLFEALCESDGSVGI
                     FSLKKAQNEAKKFIQNIYKLREYSDLKKMIEKFEELFALKEFYALQEDGDERVLNIDE
                     FYASIKEKIKEEPQTTLEDILSEISLLSDQDGIEGECVYLMSVHASKGLEFDHVFIVG
                     LEEGFFPLNESDIEEERRLAYVAITRAKKCLSLSIAKSRFYRGSRTELDSSRFLEESQ
                     LTKKISINKTEQGYHKGDLVKHKIFGIGRVISVNKSAKEEKLTINFGGIERIIMASFV
                     EKAV"
     gene            complement(14565..15002)
                     /locus_tag="R8X70_000814"
     CDS             complement(14565..15002)
                     /locus_tag="R8X70_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928609.1"
                     /translation="MIEKILENENFIALMQKNCYDLLSILIQENIEFSIVANTNFIDF
                     DPVLPENLDVKQNPFALFVLGGYTFESIQLEKDHIQFHAGFGPDDFASYVKVDLGAIT
                     QIQVENSVLFVNFSFYKRKDNTKSQKSKNIFLNNPKNKDIFKK"
     gene            complement(15002..16717)
                     /locus_tag="R8X70_000815"
     CDS             complement(15002..16717)
                     /locus_tag="R8X70_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEF2928610.1"
                     /translation="MSTWDLGVLFKNEDELENTTQNYIQQSKEFKKNYSTTLDKLNPD
                     DFLNALKEYEHLHLILSKIMTYAYLCFAKDSSKGSFYAKYEQECKKIEENLLFFELEF
                     CELSEEKTKELIKFCKGYDFYLQNLLQNKRYNLSQKEERIMLYLSNTGANAFSRLFDE
                     SMTALKIPFEGNKLSEEEILSKLYNNDRKIRKKAAKKFTKALDKNLNLLTFIFNMIKT
                     ELNNICKLRGYESAETPRHLQNQITQQSVDSLIQTTQKHFYLVSNFYKRKKQILGFNK
                     LKDYDRYAPIGKEAKFSFEESKKIILNAFYDFSPVFGDIAKEAFEKGWIDVYPQDKKQ
                     SGAFSHSATPDTHPFILLNYTDGRRDLFTLAHELGHTIHQKLSYNVSFLNQNTPLTTA
                     ETASVFAEMLVFDYVKNKLKKEELLALYAAKIEDIFATLYRQINFTCFERRIHANENE
                     LKSEEISQIWMEESQKMFGESVELSKNYALWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYKSNACSNFKELYIKMLSLGGSVSPKELVGMFGFDIEDKSFWEIGIVEIKKLIDE
                     FMRLK"
     gene            complement(16727..17608)
                     /locus_tag="R8X70_000816"
     CDS             complement(16727..17608)
                     /locus_tag="R8X70_000816"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEF2928611.1"
                     /translation="MRHLITTKDFTNDEIMELFEEARNFLDEKPRTLLEGKSVTTIFF
                     ENSTRTLSSFESAARRLGARILRLDVSRSSSSKGETLYDTAANLDAMSPNAIIVRHAN
                     SGVPHILASHMHCPVVNGGDGKHAHPTQALLDLFTIYEHFKGDIKGRKILIVGDIKNS
                     RVASSNAELLTRFGLDITFVAPPHFMPHSPLKKSYSLNEDLISKTDIIMSLRTQTERH
                     NKIIYGSLKDYANDFCIKLDLIKDKKLILLHPGPVHRNIDISDEVMDDERALVLKQVK
                     NGVAIRMAVLKKLILES"
     gene            complement(17614..18837)
                     /gene="sstT"
                     /locus_tag="R8X70_000817"
     CDS             complement(17614..18837)
                     /gene="sstT"
                     /locus_tag="R8X70_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEF2928612.1"
                     /translation="MFSKLVQSYAKGSLILQICAGIILGILVGISSKEIAEVVNLLGV
                     LFTNALKAIAPILVFILILTSICTRDFSQSSSKIRNIVILYIVGTFLAAACAVIASFM
                     FPVELVLEGVQKAENTSPMHLNEIFKNLLLNIVDNPINALSSGNYLGILAWAIGGGIA
                     LKNCSQEAKQIFVDINEGVLKIVKFIVKLAPFGIFGLVANSVAQTGAQGLLSYAKLLV
                     LLVLTMLFVAFVINALIVFIYTRKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALC
                     AKLGINKEFYSISIPLGATINMAGAAVTIAILSLSAAHSVGIQVSFLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVVQDSVETALNSSTDVL
                     FSAICSKDELNYDIR"
     gene            18989..20188
                     /locus_tag="R8X70_000818"
     CDS             18989..20188
                     /locus_tag="R8X70_000818"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEF2928613.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGYFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAKEYMPAAISYARALCDKVYAYAKA
                     HPQELGVDIKTQVTIDYGTKANFENCKPQSIHTIVVSVPCVESMKIEDLRALVNKLIL
                     ESDLPKELFNPEKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYAPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCLGTNTGVN
                     DDVLSDFVMKNFSLTPNWIRDKFGLDKPSKDTFLYADVAARGQVGQKDYPWEKLDAID
                     QFKTLIK"
     gene            20400..20558
                     /locus_tag="R8X70_000819"
     CDS             20400..20558
                     /locus_tag="R8X70_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928614.1"
                     /translation="MFKYLIRDFKDLKALQKAKDKAEELFYLDSEMVENSKKMQGILK
                     GLIDKNNS"
     gene            complement(20555..21703)
                     /locus_tag="R8X70_000820"
     CDS             complement(20555..21703)
                     /locus_tag="R8X70_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928615.1"
                     /translation="MINGINSYSSYNYTNTFSNNTPNTKSSNTVNETSNLVSDKSRAV
                     SKMLGYGVDKDGFFTSDFNEAAGLPKDYKIYAKDIENFVNIQTKSLLSSYINIDIAKS
                     IGNAYKVFSQLLNDELNNKINFTKEDLVKIPQGFEFNQNTLEINKKYNLNDKEYKDFM
                     SNYQNYSPTSHNIKIMTFFSLDDKSDIFKYSLIDPTPYSNNDKTITKSGIFMTFFTGF
                     QAKNYFIEGQTSILGKMQGFDKTMSQSEIDNLNKFISENSMNFKGDIFKLFDLLNSDM
                     SIDDFKQKILEQKENLNNPTKNTNNKETSEEDKKKPFKPMQAQSSSETYKDDNKMNEL
                     LKKLLENKFGTSDELEILFGMKFSDDDTGEFNKILSLNSAPKSIDIKA"
     gene            complement(21781..22131)
                     /locus_tag="R8X70_000821"
                     /pseudo
     CDS             complement(21781..22131)
                     /locus_tag="R8X70_000821"
                     /inference="COORDINATES: protein motif:HMM:NF024950.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            complement(22138..22542)
                     /locus_tag="R8X70_000822"
     CDS             complement(22138..22542)
                     /locus_tag="R8X70_000822"
                     /inference="COORDINATES: protein motif:HMM:NF012334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEF2928616.1"
                     /translation="MDKVVFITGGSTGIGNACVHKFHNEGYKVAFMDINQEEGQKIAN
                     NLKDVLFIAGDTKNKEDIKNAVARAVEKFGNFDVISLNAGIHRCNTILDISDEELDLI
                     IQTNIYGYVNTMRIAIPHMKKEGGSIVINASD"
BASE COUNT         7386 a         3406 c         3585 g         8235 t
ORIGIN      
        1 tttgaaagga cgaaattgtg aaattgttag ttgttgatga cagttctact atgagaagga
       61 ttataaaaaa taccctaaca agactcggac ataatgatgt tcttgaagct gaacatggag
      121 ttgaagcttg ggatttactt gaaaaaaacg aagatattaa aattctaatt actgattgga
      181 atatgcctga gatgaatggc ttagagcttg ttaaaaaagt aagagcagaa aaaaaatatg
      241 aagatatgcc tattattatg gttactaccg aagggggcaa ggctgaggtg attactgcct
      301 taaaagcagg ggtaaacaat tatatagtta agccttttac tccacaagta ttaaaagaaa
      361 aacttgaaga tgttttaggt accggcaacg gagactctga agctgagtaa tttttaataa
      421 ttaatgcaaa aattttatta tgaactgttt cttgaaattc aagagcagta taaaaattta
      481 tttcttgatt ttgttttcga tttgggtgta gacgctatag aagaaaaaga taatggtatt
      541 tatatacgct cggaagaaaa tttagaagag tttgcttggg caattgaaat ttttgcccaa
      601 aaattaagtc aaagattcaa tttaaaagaa aatattatac ttcataaaag cattgaaaaa
      661 aaagaaaata aagactgggt ggaagaatat aaaaaaggaa taaagcccat tttaattgat
      721 aatatttata ttcatactac ttggcaagaa gaaaaagaaa attatctcaa tattaaaatc
      781 aatcctgctt tagcttttgg ttctgggcat catgaaagca cttatggctg tgtaaaattt
      841 ctacaaaaat ttgctaaaaa taattcaaga tctttagata taggctgtgg aagcggtatc
      901 ttagccattg ttatggcaaa attaggatgc aaagttgaaa tttgcgatac tgatgatttg
      961 gctattgaaa gtgccttaga caatgcaaag ttaaataatg taaatttcgc acaagcttgg
     1021 catggttctg tagataaggc agagggatta tatgatttgg tggttgtaaa tataattgct
     1081 gatgtgattt tgattttaga aaaagatatt aaaaagcatt tagaagataa tgctatactt
     1141 atcttatctg gaattttgga taagtataaa acaagagtaa aagaaaaatt tcaggattta
     1201 gagcttattg atgaaatgca aatcaatgaa tggtgctctt tggtatataa aaataaaaca
     1261 aaggaaaaat gatgaataat aacaacaatg ctcctaacaa taagggcaat ccgcagggca
     1321 ataacttttt caacaagaat ccaattttta tttttgcgat ttttgctatt gttatgataa
     1381 ttgtctttaa gggatttttt gatggcaatg gatctttagg tggtgcttta aatggaactg
     1441 aggttagcaa aaatgtacct tattctgaac tcaaaaaact tattgaaagt ggacagatca
     1501 atcaagtaag tataggacaa actactataa aagcagtttc tagtgctcaa aatacagtct
     1561 atactactaa aaaagttaat gatcctgaat ttgtaagctt gcttgatagt aagaatattg
     1621 cttatggagc ttattctgaa acaaattggt ttacagatat tttattttct tgggttttgc
     1681 ctatatttat tttctttgga atttggatgt ttttggcaag tcgtatgcaa aaaaacatgg
     1741 gaagttctat acttggtata ggcagctcta aaaaacttgt aaattcagaa aaaccaaaag
     1801 ttaaatttaa cgatgttgcg ggcgtagaag aggcaaaaga agaagttaag gaaatagtag
     1861 attttttaaa atatccagaa agatacatta agcttggtgc aaaaattcca aaaggtttat
     1921 tgcttgtagg acctccgggc acaggaaaaa cattattagc aaaagcagta gcgggtgaag
     1981 ctgatgtgcc attttttagc gtttcgggtt catcttttat agaaatgttt gtgggtgtgg
     2041 gtgcttctcg tgtgagggat ttatttgaaa atgcaaaaaa agaagctcct gctattgttt
     2101 ttatcgatga aattgatgcc ataggtaaaa gtcgtgccgc aagcggtatg atgggtggca
     2161 atgatgaaag agaacaaact ttaaatcagc ttttagctga aatggatggt tttgggactg
     2221 aaagttctcc agtaattgtt ttagcagcta ctaatagacc tgaagttttg gatgcagccc
     2281 ttttaagacc gggaagattt gatcgtcaag ttttggttga taagcctgat tttaaaggta
     2341 gatgtgatat tttaaaagtg catatgaaag atgtgaaaat ttctccaaag gttaaagtag
     2401 aagatatagc gcgtttaacc gcagggcttg cgggagctga tcttgcaaat attatcaatg
     2461 aagcagcgct tttagcaggt agggattcga aaaaatatgt agaacaaaat gatcttgtag
     2521 aagctgttga aagagctata gctggccttg aaaagaaatc acgtcgcatt aacgacaaag
     2581 agaagaaaat cattacttat cacgaatgtg gacatgcttt aattgctgaa actacaaagg
     2641 gtgcaaaacg cgttagtaag gtttctgtga ttcctagagg acttgctgca cttggttata
     2701 cactcaatac gcctgaagaa aataaatttt taatgcaaaa gcatgagctt attgccgaag
     2761 ttgatgtgct tttgggcggg cgtgctgcag aagaggtatt tataggcgaa atttctaccg
     2821 gtgcaagcaa tgaccttgaa agagcaacag atattatcaa ggctatgatt tcaatgtatg
     2881 gtatgagtga aattgcaggc ttgatggtgc ttgaaaagca aagaaatact tttttaacag
     2941 gtggccaaac tataaaagat tattctgaaa aaatggctga atctttagat gattatgtta
     3001 aaaagacttt ggatgagcgt tataaagatg ttaaagacac tttaaatact tataaaggtg
     3061 cgattgaaac catggttgca gcactttatg aagaagaaac catagaaggt gctaaggtaa
     3121 gagatattat caaaagttat gaaaatgaaa acaatcttcc tacgcgtttg caggaaataa
     3181 acgaagaaca taaagaggaa agcaaacaag cagagtaatg ggaaaatata ttgctaaaga
     3241 aggacattgg tttatagtta tagtttttat cttatttgtt atttgttgga tattttatag
     3301 cttttctgtc cttctttttt tatttttatt ggtacttttg tttattttta gaatcccaaa
     3361 tcgtgtaagg gtatgcaatg atagtaaggc tatattatca cctattgatg gcaggataac
     3421 tagaatagaa aatacatttg ataaatattt aggtgaaagt gttgaaataa gcattaaaaa
     3481 tgctttttat gatgctggag ctttttacac tccttttaaa atggatatta atgatattgc
     3541 gctaaagcat ggactttttt tatgcagcga attaaaaagc gctagaataa tgaatgaaaa
     3601 tgtaagtatt tttgcttcaa gtaacggatc taatgttgtt ttacggatat atgcaggctc
     3661 ttttgataga aaattgaagc ttgataattt atctcatagc ttgacagttg gagataaaat
     3721 gggtttttta attaatggaa ccataagtat tttattgcca agagatacac gaattcatgt
     3781 aggacttgga gacgagttaa aatcaggttc tttattaggc tacttagctt aaggataaaa
     3841 aatgaacaat aataaatcac aatttattta tattttaccc aatcttttta cagcagcttc
     3901 agcgtttttg ggtgtaattt ctataatcgc ctctatacaa ggcaattatt atatggcttt
     3961 attgtatatt attttttctt taatatgtga tggtcttgat ggtcgtgttg caaggcttac
     4021 aaagactact tctaaatttg gcattgaatt tgactctttg gccgatctga tagcctttgg
     4081 cgccgcaccg gccatatttt tttatatggt tattggctct gaatttggaa gatatggctc
     4141 tttaataact gctttttttg ttgtttttgg agcaatacgc ctagcaagat ttaatgtcac
     4201 tacaggaact tatgaaccat ctgtttttat aggacttcct atacctactg ctgctgtagt
     4261 aagtgctatt tggacttata gttattatta ttatgatttt ttaagagcat atggaatcat
     4321 ttttttaatc ttgcaagcga ttttaggctt gctaatggtt agcaatatac gctatccaag
     4381 ttttaaaaag ctagatttta atagatcaag tgttttaaag gttttgatta tcttaattat
     4441 tgttttttct tttttatatc tttatccact tgaaagttta gtaatcttag caagtttgta
     4501 tgtgatttat gggataataa gagcgattta tacccttatt ttttctaaat ttaagatgaa
     4561 agcttaagca tagaattgag ctatagcctc acattctgct ttgctaaatc cagcctttat
     4621 tcttgcttcg atattaagtt ttttacctgc tagggaaaat tgattaaaca ttttacaaag
     4681 ttctataaaa tcataattgt tttgattgga aaatttccac cagttatcac ccttgcttac
     4741 atgttttatt tcatcattta agataatatg caaaacatct tttaaaagac tttttatggg
     4801 atggtttgag ctttcaagtt ttgctactac aaaaggattt gcatcaagcc ccttggcttc
     4861 taaccctcgg tgaaccactc ccattcttaa actcaaacaa tcttttgtgg cttcaagcac
     4921 ggcttctaag ttatcatgaa tagcaaaatc cccatattta taacctagct catctaatgc
     4981 tgcatttaaa agcttgaaat gtttgatttc ttcatcggca acttctagcc aatcgatata
     5041 aaattgttga ggcagatttt taaaacgata acttgcatct aaggctaaat tgatagcact
     5101 aaattctata tgcgcaatgg aatgaacaat ctttgctaaa gaatgggtag aatttacaaa
     5161 tttagggcgt ctaatgcgag tagggtgcaa taattttaaa gcagggttaa tatttgtctt
     5221 aaaaatactt ccttgctcgt gattaaaaat gaatttttgg cttttaaaat catcataaaa
     5281 tatagcaaaa ttttcaaatt tgttatcaag attttgctca tagagtattt tttcaagttc
     5341 gttaaaaaat tctttttgca ttttaagtct ttctaaaata tttttttgat tttaatatat
     5401 aaaactaaat ttttactata aaaaattcaa actaaagctt ttttggaaaa tacattttga
     5461 taaaaaataa aatttgctat aattcttaag tagtaattta gaacaatttc atcaaggata
     5521 aactatgaaa aaattaaacg aagaagaagc tagggttatt ttaaacaagg gcactgaagc
     5581 tccttttagt ggtaaatata ataattttta cgaaaaaggg atctatcttt gcaagcaatg
     5641 cgggtctaag ctttatagat ctgaagataa attcaagtca ggttgtggat ggccaagctt
     5701 tgatgatgaa atcaaagggg ctattaaaag acttcctgat aaagatggca ttcgcacgga
     5761 aattgtatgt gcaaattgca atggccattt aggccatgta tttgagggag agggtttttc
     5821 tgctaaaaat attagacatt gtgttaattc catctcttta gaatttgtaa aaggtgaata
     5881 ataaatgttt tcaaatgtag gctctgagct ttatttaatg ttttttgcgg gcataacatt
     5941 attggctgtg ttaaatcctt ttggtaattt aacgcaattt ttagccatga gcgatggcct
     6001 acctttagcc cttagaaaaa aactttttag aactatactt tatacagcat tggctattgt
     6061 gcttgctttt ttattttcag gacctttgtt tatgaattat atttttaggg tttctttaga
     6121 tgatttgaga gtttctgggg gtttggtttt aattataatg gctattaaaa atttattatt
     6181 ttcaaccaag cttgcaactc aaagttttga ttcttatcaa gaagcaaatg agaaagaaat
     6241 tttacgccaa agtttaatac ctatggcttt tccaatgctt gtaggtcctg gaaccttagc
     6301 tagtgtgata gtgatttcag aggatggtgg attggatata gcttttggag gtgtgataat
     6361 agcttttatt tttatgtttg cactttttca ttttgctgct acgattgaaa aaattgttgg
     6421 aaagcttatt ttacatgtct tttcgcgtat cgctcaggtt tttattgtgg cgatggggtg
     6481 taagatgatt ataataggta tcaaaaatat atttaacatt tgattagaca ataaaaagtt
     6541 gatatgaatg caaatcacaa gctaatgata atcaaaaatt aaaaaataag tataaaaatg
     6601 aagagaagtt atatttgatt gattaaggtg ctaaaatttg taaatccact ttcttgatca
     6661 catttttctt ttaaaatatt taaaaatgtt tttctttcga tatttttagc tcccataaat
     6721 tctaaatgtt tattataaac ttgacaatct atgacaaaat catagggttt aagaagcttg
     6781 caaagtttga ttaaagctat ttttgaagca ttttttctaa ggcttaccat actttctcca
     6841 aaaaaaacct tacctataat cagtccataa attcccccaa ttaattcttt atcctcataa
     6901 agttctaaag tatgaacgta tccttgttta aaaagctcat agtaattttc tataaactca
     6961 tcatcaatcc aactttgagg acgcgtgttg cgacacaaat ggataaggct taaaaaatca
     7021 taatcaagtt taatttgata aagattgata aattttttca tatttttttg gatatgaatt
     7081 tcgctgggat ttaatacaca tctaggatca gggcaccacc aagtaacggg tttgttagtc
     7141 catggaaaaa gcccaaaacg ataggctttt aagataaaat caggttctag tttttgactt
     7201 aaaaaaacgg gtgcgtcttt gggcgcatcc ataagtttag aatataagat cgagctttcc
     7261 atttttatta agcttgattt tagctatccc gcctttttta agttttccaa ataaaatttc
     7321 atcactgatt ttttctccga tttcttcgga aataatgcgt tttaataatc ttactccaaa
     7381 ttctttattg taggcttttt tcgctaagta tagcttagct ttttcatcag caactaattg
     7441 gatattttta agatttttag aaatttcatc taattctttt tgaatgattt taacaagcac
     7501 agtatcatct agatcgttaa aatgaagaat tttatcaata cgattgataa attcaggtgc
     7561 aaaaaaatct ttaatagcac ggttgctttt ttcttcattt ttgcttagga atccaagttc
     7621 attgctttct tttagtccta aatttgaagt catgattata atagtatttt taaagtcagc
     7681 tttaaggcca ctattgtctg taagctctgc attatcaaag atttgcaaga aagtattgct
     7741 taaatcagga tgagcttttt ctatctcatc aaagaggata agactgaaag gattttttcg
     7801 aaccgcattg cttaaaagtc ctccatcttc atatcccaca tatcctgcag gagaacctat
     7861 gagtttgctt atgctatgtt tttctgcata ttcgctcata tcaaaacgct ctaaatttaa
     7921 acctaaaaat tctgctaaaa ctttgcaaag ttcagttttt ccaactccgc tagatcctgt
     7981 aaataaaaat actcctcgtg gggtatttaa atttttaaat cctgcaaaac tttgttttag
     8041 ggtcgcaaca agcttgtcaa tcacttcatc ttgaccaaat atttttgcct ttaaattaag
     8101 acttagattc atcaaggctt tattttgatc aaattcaaac attttatgat gatgagtcat
     8161 tttggctaaa acttgttcta aatctttaat atcggcattt tttttagttt ttgccttaag
     8221 aacataagaa gctccaagct catcgataag atctatagca ctatcaggaa ggtatttatc
     8281 gctgaaaaat ttcttgctcc aaacaacagc ttgctgaagg acttcatcac taattttaat
     8341 cttatgaaaa tcctcatatt tgctttttaa accttgtaaa atttgaaaag cttcttcttg
     8401 gcttggttca tctacattga ttttagcaaa acggcgactt aaggctttgt ttttatcaaa
     8461 agtattttta tattccataa aagtggttgc acctatacat tttaaagtgc cattgcttaa
     8521 ggctggcttg agtagattag aaaaatctgt atgtgattct ccagttgctc cagctccaac
     8581 tatggtgtga atttcatcta taaataagat ggcattagga agtttttgaa gtccttctaa
     8641 gacttctttg attcgttttt caaaatcgcc acgatattta gtccctgaaa gcaatcctgc
     8701 tatatctagg ctaaaaattt tagcattttg caaatttttt ggaacttttt tttcagcaat
     8761 ggccaatgca agtccttcaa ctatcgcagt ttttccaact ccagcttctc cgattaaaat
     8821 aggattgttt ttcttgcgtc ttgataggat ttgtataatg cgctcaagct cgaattttct
     8881 tcctattaaa gggtctattt tacctttttg cgccaaaagc gttaagtcgc ttgcgtaaga
     8941 atttaaattt tctatttcgc tattttgttt aaaatcttga attttttcta aattcatacc
     9001 atgtttttgt aaaagaaagc tcgaatatgt tctatcatct tggatgagtt tttctaaaaa
     9061 atcaatgatt tttatttcat ttttatgatt aagaatttca tctaaaacta tagaattaac
     9121 aggttcgatt tcttgatcca aactttggtt tttttctgct atataatttt taagttcact
     9181 ttctaaaagt tcaaattcgg catctgcgag ttcttcaaat attgatttaa aatctgaact
     9241 tagttttaat atagcaaaaa gcacatgctc acaagttgta aattcatgac gattgatagt
     9301 gcttaaatgt ttagcattat caaggtattt ttgtaaattt tcttgatatt tcattcttct
     9361 tccactctag tttgtaaagg aaaatttgcc aatttagcag catcagaaac ttttttttgc
     9421 tttgaaagtg caatttcttg agtgtaaatt ccacaaattc cactgccatt aagatgaacc
     9481 tctaacataa ttttattagc tgtttcaaaa tcatggtaga aaatattgat taaaacttca
     9541 ataacaaagt ccatcgtggt tacatcatcg tttaataata taaccttaaa cattttaggc
     9601 tctttaagct tacttttttc taatactttt aactttggca ttatttttct ttataaattt
     9661 tatctaaatc atcttgtata aaatctgttg gaattttacc taaataaaaa tttgttgaag
     9721 tgttactatc ccaataattg ctaagatttt gataaattcc atttttcatt actactttaa
     9781 aaggcaattg ctccatgctt tgataatcta tatcttttaa aatttgagca ataatacgat
     9841 cattttgcga atcattactt aagaaataat aagctccata atcatcagca aattttttaa
     9901 ccgtttcatc acttacatct tcaaaatgtg ttagccccat gataataaat ttatttgagt
     9961 tatttttcca aagtttgcta agctctaaag cttcttcttt gcaaggagcg caaaaagttc
    10021 caaaaaaatc aatcatcaac actttatctt cctcaccttc aacaatgaag cctttatcgg
    10081 ttcgaattaa ggttttagct cctccattta cgctatttaa tacaatctta tcgcctttgc
    10141 tgtattcttc aaacataaaa tcattttgta tgtcttcttg gtgcgagcaa gcgtttataa
    10201 aaaaacctat aatgataaaa aatgacaata tcgttttctt tttcatacta gtcctttatt
    10261 tgtaattttt catagcagat cttgcttcca tatctgcttg ttttttcttt aaactttcgc
    10321 gtttatcgtg cagatttttt cctttggcta aggctagcgt ggctttaact ttgtttttat
    10381 ggttaaaata gagttctaag actaccaagg tgtatccctc aatactaact ttgcctaaaa
    10441 gcttatctat ttgtttgcgg tgcattaaaa gttttctagc agctctttct tcatgtttat
    10501 aataagaatg cgtagtgcta aggtgcgata tatgagcatt tagcaaaaat aattcaccct
    10561 taataatacg cacaaaagag tcttttaaat ttgcccttcc agcgcgtaaa gccacgactt
    10621 cactaccctt taaaaccact cctgattcaa agcgttctat aatgctataa tcaaataagg
    10681 cttttttatt tctagcaatg actttcattt atgtacctta aaaacactac ttccgcttcc
    10741 acttaggaaa aaaccttgtt ctaaaaaaag aaacatttta ggatataaag ttacacaagg
    10801 agtaaataaa tcattaagct gggtattttt aaaagtttct aaaagttctt tcgtgtttaa
    10861 atctttgtaa attttagctt caagaatgtt tttttcaaaa tcaatttccc ttttatcaaa
    10921 ttcatcataa acttttttag tttgacaaga tacttcagga aaaacccatt ctaggctcgg
    10981 tatagtatca ttaaattctt ctatgatttc accacatccg cttacattag cactttcaaa
    11041 accactcaag aaaaaagcaa tatcactgcc tagttgagtg cttaattcta taagtttttg
    11101 agtgcttaat tttaagttta gttcttcatt aattagcatt aaaaaacttg cgcaatcact
    11161 actacctccc ccaagtcctg cacatgtggg gatatttttg attaatttta agcttttggt
    11221 tttaaaaaat tcttctaatt tattttgata gccattttga caaagtaaat gataagcttt
    11281 tgtgatgata ttatcctcgc aattaaaatt gctaatgatt tcaaaacctt taggagaatt
    11341 agagcttttt tcaacgatat gaatttcatc aaaaaggttt tttaaaagta taaagcgaga
    11401 ttctaaaaga tgatatcgtc ttttatcaaa tccgacaagt tttaaaaaaa tatttgcttt
    11461 agcatatgct ttcatgggat caattttttg cttaaatcat ctaatttaac atcgtttttt
    11521 accacagaat gtaaattctc atctttgatt tgagtaagga gttcttttct taaaatcatt
    11581 agagattttg gagcatcgat gcctattttg gcatatcctt ttccagtttg aacgattttg
    11641 atttcaattc cttcaccaat aacaatactt tcattttctt ttcgtgataa tattaacatt
    11701 tttcaacctt atttaaaaga tattctactt tattttcttt aatatttata atactaaaat
    11761 actttttatt ttctatataa taaaaaccct catcttgaaa ttttaattct tccaaggata
    11821 ttttagtgcc attttcaagt tttgttaaat ctttaatgaa attgggcttt aaatttagat
    11881 attttaacac atttaagctt ttttcgtgat tataaaaaaa ttctccctca cgggtgcgct
    11941 caagagaact taaagtggca ttaataccta attttttagc aaaaagctca caataagatc
    12001 ttatataagc tccttcgcta acgcttaatt caagctgtaa aaagggatga gtataatgta
    12061 tgattttgca agagaaaatt tccattatac aagattttaa ctctatattt tcacctcttt
    12121 tggcaaattc ataagctctt ttaccttcta ttcttttagc actaaattgc ggtggagtat
    12181 aagaaatttt tcctaaaagt tccattttga tttgttctaa gagtttaatg tcaaaagctt
    12241 ttataagctt tatttcttgt atgtttttat tatcaagact tagagattta accccaagcc
    12301 aaagtgttgc ttggtatgtt tttggagttt tttttaaaaa tctaaaaagc ttagtgtatt
    12361 gcccaaaggc gactattaaa acccctttgg caaagggatc taaggttcct gaataacctg
    12421 cctttttatt tttatatctt ttttttatct gacctaaaaa agcattagaa ctcatttctg
    12481 cgggtttaaa agcaacaaaa attttattca tacggctttt tccacaaaac ttgccataat
    12541 aatgcgttct atcccgccaa aatttatggt aagtttttct tcttttgcgc ttttattgac
    12601 actaataacg cgtcctatgc caaaaatttt atgtttgact agatctcctt tatgatatcc
    12661 ttgttcggtt ttgtttatag agattttttt tgttaattga ctttcttcta aaaaacgact
    12721 agagtctaat tccgtgcgac ttcctcggta aaaacgagat tttgcaatgc ttagcgatag
    12781 acatttttta gcgcgagtga tagccacata agcaaggcgt ctttcttctt ctatatcgct
    12841 ttcattcaaa ggaaaaaatc cttcttcaag tcctactata aatacatgat caaattccaa
    12901 acccttgctc gcatgcacac tcataagata tacacattct ccctcaatcc catcttgatc
    12961 gcttaacagt gaaatttcac ttaaaatatc ttctagggtt gtttgtggtt cttcttttat
    13021 tttttctttg atgcttgcat aaaattcatc aatatttaat acgcgctcat cgccatcctc
    13081 ttgaagagcg taaaattctt taagagcaaa aagttcttca aatttttcaa tcattttttt
    13141 taaatcagaa tattctctaa gtttgtaaat attttgtatg aatttttttg cctcattttg
    13201 tgctttttta agagaaaaaa ttcccacact gccatcgctt tcgcacaatg cttcaaagag
    13261 tgaaattttt cttttttgtg cataatcttc taaattttgt aaagcttttt cacctatgct
    13321 tcttttaggc ctattgataa tgcgtttaaa ggataaatca tcattagggt tgattaaaat
    13381 tctaaaatag caaatgagat ctttgatttc aagtctttca taaaaacgca ttccgcttag
    13441 caatttataa ggaatttttt ccttcataaa ggcttcctct atggatcttg aaagagcatt
    13501 gatacgaaat aaaacagcaa tttctccagc ataaatgccc gaatttaaaa gctctttgat
    13561 ttttttagcc accaatgcac tttcgatttt ttcattatct gaacttagaa tttgaatatc
    13621 ttcaccctca tcttttgtgc aaagtagggt ttttccaaga cgttttttat tgtgtgatat
    13681 taggttatta gcagctttta aaatcatacc cacagaacga taattttgct ctaatttaac
    13741 aagttttaca tttgaaaatt cactttggaa atttaaaata ttttctatct ttgcaccacg
    13801 ccaactataa atgctttgat catcatcccc tacaacgcat atattttcat gaacgcagca
    13861 aagattttta agaattttgt attgtaaagc attggtatct tgatattcat cgactgtgat
    13921 ataacgataa aaagagcttt gctctttggc gaaattttga tcattttcca aaagaatatt
    13981 ggtcaaaagt aaaagatcat caaaatctac gaaattgtgc ttgagtaaat attcttgata
    14041 gttttgataa taaatagcaa ttttttgcaa ggcttggtgt ttgatttcat tatcttttaa
    14101 caattctaga tcattaaata catcttgaac acttttactt tcatttttaa agtgtgagat
    14161 aaactgaaga atttgatgag ggctagtttt atcatcatta atgagttctt ttaaaatttt
    14221 tttagaatca tcattatcga tgataataaa attatttttt cttcctaatc tttctatatg
    14281 gagttttaaa aacaataagc caaatttatg aaaagtgcaa agtaaaggat tttcattgct
    14341 attaagaagg cttaaggctc tatttttcat cacacttgca gccttgtttg taaaggttag
    14401 ggttagggta ttgatagcag gaattccaac ttccccaatc atataggcaa gacgcgttgt
    14461 aattgttttg gtttttccac tacccgcacc tgctagtata agcatagggc catcgatatg
    14521 acttgcagcc tctttttgac tttcatttaa acctgtaaat aaattcattt tttgaaaatg
    14581 tctttgtttt tagggttgtt taaaaagata tttttggatt tttgtgactt tgtattatct
    14641 ttgcgtttgt aaaaactaaa attaacaaac aaaacactat tttcaacttg aatttgagta
    14701 attgctccaa gatctacttt aacatagcta gcaaaatcat caggaccaaa acctgcatga
    14761 aattgtatat gatctttttc taattgaatg gactcaaaag tatatcctcc aaggacaaat
    14821 aatgcaaaag gattttgttt aacatccaaa ttttcaggca acacaggatc aaaatcaata
    14881 aaatttgtat tagccactat agaaaattct atattttctt ggattaagat tgaaagtaaa
    14941 tcatagcaat ttttttgcat taaagcaatg aaattttcat tttcaagaat tttttctatc
    15001 attattttag cctcataaat tcatcgataa gttttttgat ttctactata cctatttccc
    15061 aaaagctttt atcttctata tcaaatccaa acattcccac aagttctttt ggactcacgc
    15121 ttcctccaag agagagcatt ttgatataaa gttctttaaa attgctacaa gcattgctct
    15181 tgtaaagccc ataaagtgcg agtactaaaa gctgggcata agcataagca taacaataaa
    15241 aagggctatg gataaaatga ggaatataac tccaccaaag ggcataattt ttacttagtt
    15301 ccacgctttc accaaacatt ttttgagatt cttccatcca aatttgagaa atttcttcac
    15361 tttttagctc attttcatta gcatgaatgc gtctttcaaa acaagtgaaa ttaatctgtc
    15421 tataaagagt ggcaaaaata tcttcgattt ttgcagcata aagcgctaac aattcttctt
    15481 ttttgagctt gtttttaaca taatcaaata ccaacatttc agcaaacact gaagcagttt
    15541 cagctgtagt taaaggagta ttttgattta aaaaagaaac attataagaa agtttttgat
    15601 gtatggtgtg tcctaactca tgagcaagcg taaaaagatc gcgccttcca tctgtataat
    15661 ttagcaagat aaaaggatga gtatctgggg tagctgaatg tgaaaaagca ccactttgtt
    15721 ttttatcttg tggataaaca tctatccaac ccttttcaaa tgcttctttt gcaatatctc
    15781 caaaaacagg agaaaaatca taaaaagcat ttaaaatgat ttttttactt tcctcaaaac
    15841 tgaattttgc ctctttgcca atgggtgcat aacgatcata atctttaagt ttgttaaagc
    15901 ctaaaatttg tttttttctt ttatagaaat tagatacgag gtaaaaatgt ttttgcgtgg
    15961 tttgaatcag cgaatcaaca ctttgttggg tgatttgatt ttgcaagtgc cttggagttt
    16021 ctgcgctttc atatccgcgt aatttgcaga tattgtttaa ttctgttttg atcatattga
    16081 aaataaaagt gagtaaattt aaatttttat caagagcttt ggtaaatttt ttagcggctt
    16141 tttttcttat ttttctgtca ttattgtaaa gcttgcttaa aatttcttcc tcgctaagct
    16201 tattgccttc gaaaggaatt tttaatgcag tcatgctttc atcaaataat ctactaaaag
    16261 cattagctcc tgtgtttgaa agataaagca ttatgcgttc ttctttttgg cttagattat
    16321 agcgtttatt ttgaagaaga ttttgcaagt aaaaatcata gcctttgcaa aatttaatca
    16381 attctttagt tttttcttca ctaagttcac aaaattctaa ttcaaaaaat aataaatttt
    16441 cttctatttt tttacattct tgttcatatt tagcataaaa agaacccttg gagctatcct
    16501 tagcaaagca taaataagca taagtcataa tttttgagag tattaaatgt aaatgttcgt
    16561 attcttttaa agcgtttaga aaatcatcag ggtttaattt atctaaagta gtagaataat
    16621 tttttttgaa ttctttagat tgttgaatat agttttgcgt tgtgttttct aattcatctt
    16681 cgtttttaaa caatactccc aaatcccaag ttgacatatt ttctccttag ctttctaaaa
    16741 tcaatttttt taaaacagcc attctgatag caacgccatt tttaacttgt tttaaaacta
    16801 aagctctttc atcatccatc acttcatcgc ttatatcgat atttctatgt acagggccag
    16861 gatggagcaa gatgagtttt ttatctttaa tcaaatcaag cttgatacaa aaatcatttg
    16921 cataatcttt taaagaacca taaatgattt tattatgtct ttctgtttgt gttcttaagc
    16981 tcattataat atcggttttt gagattaaat cttcatttaa agaataagat ttttttaaag
    17041 gtgaatgagg cataaaatgg ggcggtgcca caaaggtgat atctaaacca aatcttgtta
    17101 gaagctcagc gtttgaagag gcaactcttg aatttttaat atctcctacg attaagattt
    17161 ttctaccctt gatatcacct ttaaaatgtt cataaattgt aaaaagatca agtagggctt
    17221 gagtagggtg tgcatgtttg ccatctccac catttacaac aggacaatgc atatgagaag
    17281 ctaaaatatg aggtactcct gaatttgcat gtcttactat gatagcatta ggactcatag
    17341 cgtctaaatt agccgctgta tcataaagtg tttcgccttt actagagctc gatcttgaaa
    17401 catcaaggcg taaaattcta gctcctagtc ttcttgcggc actttcaaag gatgagagcg
    17461 tacgcgtgga attttcaaag aatatcgttg taacactttt gccttcgagt aaggttctag
    17521 gtttttcatc taaaaaattt cttgcttctt caaaaagctc cattatttca tcattagtaa
    17581 aatcttttgt tgtgatgaga tgcctcattg tatttacctt atatcgtaat ttaactcatc
    17641 tttagaacaa atagcactaa ataaaacatc tgttgagcta ttgagcgctg tttcaacgct
    17701 atcttgtacc acgcctatga taaatcctat tgcaactact ttcatggcga tatcatagtc
    17761 gatattaaat aaagagcaag ctaaagggat gagtaaaagc gagcctcctg ctacgccact
    17821 tgcgccacaa gctgcaaaag tagcgataat gcttaataaa aaggcttgca aaaaacttac
    17881 ttgtatgcca acgctatgtg cggcgctaag acttagtatg gctatggtta ctgctgcacc
    17941 tgccatgttt atggttgctc caagagggat agatatacta taaaattctt tattgattcc
    18001 aagcttagca caaagtgcca tatttacagg aatatttgca gccgagcttc ttgtaaaaaa
    18061 agcaaaaaaa gcgctgtgtc ttaagcagat aaaaatcaaa ggaaaaggat tttttctagt
    18121 ataaatgaaa acaattaagg cattgattac aaaagcaaca aaaagcatag taagtacaag
    18181 caatactaag agttttgcgt agcttaacaa tccttgcgct cctgtttgtg ccacagaatt
    18241 agccaccaaa ccaaaaattc caaaaggagc gagttttact ataaatttaa caatttttaa
    18301 aaccccttca ttgatatcta caaaaatttg ttttgcttct tgcgagcaat ttttcaaagc
    18361 tataccaccg cctattgccc aagctaaaat tcctaaataa tttccacttg aaagtgcatt
    18421 gataggatta tctactatat ttaaaagtaa attcttaaaa atttcattta aatgcatagg
    18481 agaagtattt tctgcttttt gaactccttc taggactaat tccacaggaa acataaaact
    18541 tgcaatcact gcacaagctg ctgctaaaaa agttcctaca atatataaaa tgacaatatt
    18601 tcttatctta gaactacttt gagaaaaatc tctcgtacaa atcgaagtta aaatgagtat
    18661 aaagacaaga ataggagcta tagcttttaa agcattggta aataaaactc ccaataaatt
    18721 gacaacttca gctatttcct tagagcttat tcctacgagt atgcctaaaa ttatacctgc
    18781 gcagatttga aggattagac tacctttggc gtagctttga actagttttg agaacataag
    18841 aacctttatt attttgaaat ttgatgcaat atatcggact tgattttaac gaacttttgc
    18901 ttaattttag tgaatttttt aaagcattaa gcttgaataa atttatttga gttagaattg
    18961 taactcattt tttatgaaag gactttttat gtatctattc acttcagaag tcgtaagcgc
    19021 aggtcatcca gataaatgcg ctgatataat cgctgataca atagtggata tactcttgaa
    19081 aaatgacaaa aattcaaggg tggcgagtga ggtttttgtc gcaggaaata aggttgtgat
    19141 aggaggagaa gttaaatcaa atcacaagct tagtaaagct gattacgata atttagttaa
    19201 agatgttttg aaaaatatag gctatgatgg agcaggatat tttagtaaag aacaatgttt
    19261 gcatcctgat gaagtcgatg ttatggtatt tttaaatgag caaagccctg atattaatca
    19321 aggtgtagat caagaagatg gtgaaacagg tgctggagat caaggtatta tgtttggttt
    19381 tgcaagttgt gaggctaaag agtatatgcc agcagctata agctacgcaa gagcgctttg
    19441 tgataaggtt tatgcttatg caaaagctca tccgcaagag ttgggtgtag atattaaaac
    19501 tcaagtgact attgattatg gtacaaaagc taattttgaa aattgtaaac cgcaaagtat
    19561 tcatactatc gttgtttctg taccttgcgt tgaaagtatg aaaatagagg atttaagagc
    19621 tttagtaaat aaattgatcc tagaaagtga tttaccaaaa gaacttttta atcctgaaaa
    19681 aactagaatt ttgatcaatc caacaggaaa atatgtcaat cactcttctt tacatgatag
    19741 tggtttaaca ggaagaaaac ttatagtgga tagttttgga ggatatgctc ctataggagg
    19801 gggtgcgcaa tctagcaagg attataccaa ggttgataga agtggacttt atgcgggcag
    19861 atggcttgct aaaaatatag tcgcagcagg acttgctaaa aaatgtatag ttcaactcag
    19921 ttacgccata ggtgttgcta aacctacttc tgtaagtgta gattgtttag gaaccaatac
    19981 aggggtaaat gatgatgttt taagtgattt tgtaatgaaa aatttctctt taaccccaaa
    20041 ttggattcgt gataaatttg gtcttgataa acctagcaaa gatacttttc tttatgctga
    20101 tgtagcagct cgcggacaag taggacaaaa ggattatcct tgggaaaaac ttgatgctat
    20161 agatcaattt aagactttaa ttaaataagc cttgtttttc aaggcttatc atactttaaa
    20221 tttcatctta atataaaacc aatttaaaat tcaaacttca tcaatagact tattgagatt
    20281 gtaaaagaat atataggcaa aagtatccac gatacaaggt atgatagtcc atttcttatg
    20341 aatatgaaaa agacagaaaa agcttatttg taatcgcaga aagaaaaaca gacaagcgat
    20401 tgtttaaata tctaataaga gattttaaag atttaaaggc tttacaaaaa gcaaaggata
    20461 aagccgaaga gttattttat cttgatagtg agatggttga aaactctaaa aaaatgcaag
    20521 ggatattaaa aggcttgata gataaaaata attcttaagc cttaatatct atgctttttg
    20581 gtgcagagtt taaagaaaga attttattaa attctcctgt atcatcatcg ctaaacttca
    20641 taccaaaaag aatttctaat tcatcgcttg tgccaaattt attttccagt agctttttta
    20701 aaagctcatt cattttatta tcatctttat aggtttcgct tgaactttgc gcttgcatag
    20761 gtttaaatgg cttttttttg tcttcttctg aagtttcttt gttatttgta ttttttgtag
    20821 gattgtttaa attttctttt tgttctagta ttttttgttt aaaatcatca atgctcatat
    20881 ctgaatttaa taaatcaaaa agcttaaaaa tatctccttt aaaattcata ctattttcac
    20941 ttatgaattt gtttaaatta tcaatttcac tttgactcat agttttatca aatccttgca
    21001 ttttgcctaa aatacttgtt tgtccttcga taaaatagtt ttttgcttga aatccagtaa
    21061 agaaagtcat aaaaatacca ctttttgtta tagttttatc attattacta taaggagtag
    21121 gatctattaa agaatattta aaaatatcac ttttatcatc aagtgagaaa aaagtcatta
    21181 tttttatatt atgggaagtc ggagagtaat tttgataatt agacataaaa tctttatact
    21241 ctttatcatt taaattatat tttttattta tctccaaagt attttgatta aattcgaaac
    21301 cttgtggtat ttttactaag tcttcttttg taaaattgat tttattgttt aactcatcat
    21361 ttaaaagttg tgaaaatact ttataagcat ttcctatact ttttgctata tcaatattaa
    21421 tataacttga taatagactt tttgtttgaa tattaacaaa attttctata tctttagcat
    21481 aaatcttata atcttttggt aagcctgcag cttcgttaaa atcgcttgta aaaaagccat
    21541 ctttatctac gccatatcct agcattttac ttactgccct agatttatcg cttacaaggt
    21601 ttgaagtttc atttacagtg ttagatgatt ttgtatttgg agtattgttg ctaaaagtat
    21661 ttgtataatt gtagcttgaa taggaattta taccattaat catctttgcc accttataaa
    21721 taaagtttta tttataaagt aaatcggcaa aaatgatttt ttcttaagta aaaattgtat
    21781 ttaatgagga attcctgctg ttaatccacc atcaatcaaa taaagtccac cagttataaa
    21841 acttgccttt ggacttgcta aaaaataaat cagctcggct acttcattgg cttgtcctac
    21901 tttttttaaa ggatattttt ctgcttcatt ttgccaataa aaatctgtat ttccaccatg
    21961 tgtaatgttg gcaaagtctt gaaataatct ctctgccatc ggtgttttga tagttcctgc
    22021 acatacagca tttactctaa tttttggtgc taaatctaag cttaaagatt ttgttatttg
    22081 tcctaaagca ccttttgtaa gtccgtatgc aaagctattt ggctttccta caaaacatta
    22141 gtcagaggca ttgattacaa tacttccgcc ttcttttttc atatgaggaa tggcgatcct
    22201 catggtgttt acatagccat aaatattggt ttgaataatc aaatcaagct cctcatcgct
    22261 aatatcaaga atggtattgc agcgatgaat tcctgcattt aaagaaatta catcaaaatt
    22321 tccaaatttt tctactgctc tagcgacagc atttttaata tcttctttat tttttgtatc
    22381 tcctgctata aataagacat cttttaaatt attcgctatt ttttgtcctt cttcttgatt
    22441 gatatccata aaggctactt tatagccttc attatgaaat ttatgtacac aagcattgcc
    22501 aataccagta gagcctcctg taataaatac aactttatcc atagcattat ctccttttgt
    22561 aaattataaa gaaattatta aaacatatct aattttaaaa tatcttaaaa tt
//
LOCUS       DAQUWA010000025        21571 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.025, whole genome shotgun sequence.
ACCESSION   DAQUWA010000025 DAQUWA010000000
VERSION     DAQUWA010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21571
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.025"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..689)
                     /gene="ung"
                     /locus_tag="R8X70_000823"
     CDS             complement(<1..689)
                     /gene="ung"
                     /locus_tag="R8X70_000823"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEF2928617.1"
                     /translation="MKEITINIEDIKINNDWKEFLKEEFSKSYFLEIKKRYIQALNNK
                     AIIYPPSNLTFNAFNLTPLSELKIVLLGQDPYHQPNQAMGLSFSVPCGVKIPPSLLNI
                     YKELKADLNIEPSKSGDLSSWAKQGVLLLNSILSVEAGKPASHSSWGWQEFSDAVISK
                     LSLEKSGLIFILWGNYAKSKKALIDTKKHFILEAAHPSPLARTGFLGCKHFSKANEIL
                     KNLGKKPINWQ"
     gene            953..2359
                     /gene="aspA"
                     /locus_tag="R8X70_000824"
     CDS             953..2359
                     /gene="aspA"
                     /locus_tag="R8X70_000824"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEF2928618.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFNISHERLKDFPR
                     FVRALARVKKAAAMANYELGLLDKDIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIALELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMMGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPNYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVN
                     QVCYAVIGADVTVTFASEGGQLQLNVFEPVIAYSLFNSIVMLEKAMHTLADKCIDGIS
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMSTGKRVADIALERGLLSKEQI
                     DEILTPANMLNPHMEAKK"
     gene            2376..3713
                     /locus_tag="R8X70_000825"
     CDS             2376..3713
                     /locus_tag="R8X70_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HEF2928619.1"
                     /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVVLGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSKPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFIACMLTAFIVSLITPMDLSKDSVYQERLKAGLVKDAGA
                     ILHGEDKPGAKLSVAIFLITVLAVVLYATAISSNIKWIDPVVVPRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     LPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFVPGVLAIAIAVALGFVIAPMLM"
     gene            3783..5135
                     /locus_tag="R8X70_000826"
     CDS             3783..5135
                     /locus_tag="R8X70_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928620.1"
                     /translation="MKYKTIVFSILAIIFSACSTHQEQNVFYQQNLFSQTCNKQFFQE
                     QQEKISQNKDMIFTGLNTGYIARDCKDFNLSNSIFDKVEDSYKYDVDLQSLSKKSTRA
                     LASTLINEGVNDYQGAWYERTMLNVYKGLNFMSLGDFVNARVEFNRALMRQEKAKEYF
                     ASEIKKAYQEASKEEKLRQNIDNNIKIVSKQYENLFKDFNAQKDYTNPYVTYISSIFF
                     FMDYDYKKAADLLKEVYVLNLNKEIEKEFKIFDQYSSSLNPKKLKKYIFIIYENGLSP
                     ALDEFNLTLPFIFDDYITTASVALPILKKRNASYENLNIANNHQKFTTSNAFDFDQIV
                     ASEFKANLTSIIIKSLISSTLKTSLNMAVAKNDESGILSLATNIFSIATTRSDLRFWN
                     FLPKNIQIMMIENDGSVQIYDDKNQKIYSSEVDIDKNVLIVVRSFASQFPARVYKIEN
                     "
     gene            5166..5789
                     /gene="lpoB"
                     /locus_tag="R8X70_000827"
     CDS             5166..5789
                     /gene="lpoB"
                     /locus_tag="R8X70_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HEF2928621.1"
                     /translation="MKKNIFIIFSAFFAVFFAACGAPVYTDGYASQKKQGDALTLGLD
                     REDFEKTAQIMIDSMLSDPAFANIQPGQRKVIAIGKIINDTPQRIDTDKLISKITIAL
                     RKSGKFVLTTAVAAGGARDEMSEAVRELRDNDEFNQNTISSKGTLVAPDFSISGKIRQ
                     DNVKLKNGDIQAEYFFYLSVTDLNSGLAYWEDERTIDKTGSSKSVTW"
     gene            5789..6775
                     /locus_tag="R8X70_000828"
     CDS             5789..6775
                     /locus_tag="R8X70_000828"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928622.1"
                     /translation="MKKIFLFLTILSFMWAQDDVIIYDYVPLEDVNLSSLDPVQSLKT
                     LPHQRNKFQKVVQGNGTGESKEEALNNALIDALSQFKGVSNVNLRQELQSIDLSFSHL
                     GQISQKSKSVLQNVSKGYIDTYKVDKIDQNGTLWQVEISAFKSLYQNDNKPKLVILND
                     KNKEESYLKRALYDAFSQDENFTLLEREHDFKDENKIIKSEDGSSEESYKLGNVLGAD
                     YILEFEILDITQAKQSKISYQNNTKVSINIAYKLIFYPTRELVFSKTFNTTFTLSGDS
                     KKEQKNWENIALFMQREMEKSLFFDTLEEDNKQEGKENTYKLHENGGVNLGF"
     gene            6932..7240
                     /gene="rplU"
                     /locus_tag="R8X70_000829"
     CDS             6932..7240
                     /gene="rplU"
                     /locus_tag="R8X70_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEF2928623.1"
                     /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            7251..7505
                     /gene="rpmA"
                     /locus_tag="R8X70_000830"
     CDS             7251..7505
                     /gene="rpmA"
                     /locus_tag="R8X70_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEF2928624.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGIGKDHTIFALIDGFVKFERKDKDRKKVSVYPA"
     gene            7610..8665
                     /gene="obgE"
                     /locus_tag="R8X70_000831"
     CDS             7610..8665
                     /gene="obgE"
                     /locus_tag="R8X70_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEF2928625.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNE
                     VLLDLTKEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIAD
                     VGLVGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMREMLLKEQFIVLRKELEKFSNELFGREFG
                     IMISKSDSVNLGEDFAEQIAQNIANLEEYLKSIDNPQSFLIKVSSLEKTGLKELKFML
                     LEKIKKLREKREKKVIK"
     gene            complement(8709..9212)
                     /gene="traF"
                     /locus_tag="R8X70_000832"
     CDS             complement(8709..9212)
                     /gene="traF"
                     /locus_tag="R8X70_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HEF2928626.1"
                     /translation="MANFRIQTYLFALIVALFFIACDSGENFKALNSNKIYNFSYNGF
                     EKSLKLDDQTQNFALVFFTKDCGVCKEQIPILQDLAKNYDFNIFIVLGDAKDAKDAKA
                     WADEKGLSHLALFYEKKAAKYLSGAVGEIYGVPVLSFFKEGKIDEKFIGLTPYGVLEN
                     EIKKLKI"
     gene            complement(9173..9661)
                     /locus_tag="R8X70_000833"
     CDS             complement(9173..9661)
                     /locus_tag="R8X70_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEF2928627.1"
                     /translation="MKKVFLFFISLFLLNACSFDTNQDQGKIGQIGAEISAKDTLGKA
                     VKLADDKSNIKVLVFFQNGCPSCLQELPSLDKFMQEHPNKISVYAINSVDKVEVVQVL
                     AEQLNFKNIKVLTDDLKITNDRYAVFATPTTIILKDGIIKERILGEKPWQTFESKLIS
                     LL"
     gene            complement(9658..10305)
                     /locus_tag="R8X70_000834"
     CDS             complement(9658..10305)
                     /locus_tag="R8X70_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928628.1"
                     /translation="MKELIQIKNLSKKFGKVKALDNINLNIYKGEWLAIMGPSGSGKS
                     TLLNILSLMDDPSSGKYILDNEDLEQINEEQKITLRREKIGLIFQQFHLIPYLSALEN
                     VILSQYYHSSVDEEDAKAVLEKVGLSHRLSHLPSQLSGGEQQRVCIARALINNPEILL
                     ADEPTGNLDEANEKIVLETLQKLKNEGKTIVLITHNSELAKFADRTLILQHGILK"
     gene            complement(10305..11423)
                     /locus_tag="R8X70_000835"
     CDS             complement(10305..11423)
                     /locus_tag="R8X70_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEF2928629.1"
                     /translation="MVDKFFLNELFKSIAFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDTKLSKELKAYGANVIIEPKNDKELILNQDYEEAKKNLKARALTPFLYTFLNLGSTS
                     GVVLGTDFRALKITKPFIEVKEGSFSLSDFDENSAFLGINLSKQLGFKVGNELQIYNP
                     ENGKTTKLTIKGILLSNDELDSIVLAPLSVVQNLSDTFGIQYANAVVYGNFDEINTKT
                     KNISNESINAKPISSVSLSEGLVLDKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEIFKLFACEYFIISLFASIIGAFCGIFLANIFGYLIFNASIDFR
                     FKAIFMALIVSLFFAFLAAFFPIKKALKINVCENLKGE"
     gene            complement(11413..12711)
                     /locus_tag="R8X70_000836"
     CDS             complement(11413..12711)
                     /locus_tag="R8X70_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2928630.1"
                     /translation="MMLVKMITHSIFRNKIQKFLAFLTCFLATLLLCTMLNITLSIGD
                     EVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMLKDIYWRNNIT
                     AFAPFLEGKIEIKSNNSSKKILLYGTYFQKAIEIKDDDDFITGIKSLYPYLKVQGKWA
                     KDDSNEIMLGEDFAKNNDLKINDTIQLIGENKISKEVKIVGILLHANPKMSNKIITPL
                     NLAQELLEKKGLYASAEVRAFTIPESALSEKVRRMGEEKLDQIEYDKWYCSAYVGSIA
                     SQISDGLPGADAKALNAISDAQSLVVKKIQSLMAITCIICLIVASIAISSLMSSEIHR
                     RKKEIGLLKVLGANTFQIYLLFAGENLIIALVSAVFGFIFGIGLSELISLGIFGYFIN
                     IAFIALPLSLVFAGLIAILGCLLPIKNIANLSPAGVLYGR"
     gene            complement(12698..14101)
                     /locus_tag="R8X70_000837"
     CDS             complement(12698..14101)
                     /locus_tag="R8X70_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HEF2928631.1"
                     /translation="MSIYFVHFLSSILPLSILMAFITPDKRYIFKSFLALFLGFLFGY
                     FAFFIAAQFLKTENLIFNFNFIFIACLLLSFVFYFWQKIEILSFILLGNLSFCIALHY
                     YNLTQDFPIFNGVLIDSEAISSLGFIALALLICILIFFFLKWQKNINKKASFILFLIL
                     IFIEGDKVLANILLTLMRNSFIETHTFLVSFVGKSNYFGVFGIYVYLFFIIFLAFLSL
                     QIRKKNIVKKQILDIVYRKNEAKNTLINRYFSSVFISCILSFCIILYFFMVSSKPLSI
                     DEPTELLPDKNGKFIFDVALLRDNKLHRFAYISEQGKVIRFFLINKREDRDSPVAVFD
                     ACAICGDMGYIKKEGELICISCNVRIFLPSVGKTGGCNPIPLKYDYDGEKITIDVKDV
                     IAGSNYFSQIKDIQVQDPVSKDKIINTQAPFSYSYKGITYYFSNEKNYEEFKKDPMKY
                     VEDTEALFLIQRRNNAS"
     gene            complement(14189..14728)
                     /locus_tag="R8X70_000838"
     CDS             complement(14189..14728)
                     /locus_tag="R8X70_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HEF2928632.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            complement(14725..16794)
                     /locus_tag="R8X70_000839"
     CDS             complement(14725..16794)
                     /locus_tag="R8X70_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEF2928633.1"
                     /translation="MKFFKILFFFSILFLANSVFARVDDYVAEANTIKNILEESIKSY
                     EKGDNLKAKKLSEDAYFQHFENMEGSIGRNIGKKAITMERKFTNLRRLYKDKAPIEQI
                     DALIESLYYDLDEVAPILQNGYRLQAEASDTNYDKAAAEKSSIQANAKREAEAEALIA
                     QMMGIDKNDLAKTNSSSSTQNETINDSINNDLQAAAAMDARLQFILDNISTKFSQAAN
                     AFKEKNYQTSKDFLNDALFSDYRNTKVEILVNKFTKAGNDQKIQQAIRTLIRQINDAK
                     IDEKGLRDGLDNIEEQIFDVFLQIPNSELSSLQISGFNDETKGKDYAKVSNNIKLALD
                     EILKNYDGFSTSMVDDLQGIYLDIFEASGMENKIGAVDSGLKLKIESLFSKGVALIKA
                     SADKKELEATFNDLEQLIASSVDKIQDSTPYSLFIWALSIILREGLEALIIVVAIVSY
                     LVQSGNKNRLNIAYSALFTGVILSFVTAFGVSWLFKENAGQSRELIEGITMLIAVLLL
                     FYVGFWLLSNAQNKKWTSFIKQGAIDAISNNSAKTLWITVFLAVYREGAETVLFYQAL
                     LFDAKTSTDFGAVFGGLGLGILILIVLYFLLKAGAIRIPVKQFFYITSYIIFYMVFVF
                     TGKGIAELIEGKVIIPSLIPMNFEPILWLGIYPYYETLIPQFIVLIMLIIGILITKQI
                     SKKGVKS"
     gene            16972..17154
                     /locus_tag="R8X70_000840"
     CDS             16972..17154
                     /locus_tag="R8X70_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HEF2928634.1"
                     /translation="MISDATMSNANLLTAVNTSVLKKSMDTNEVLMNELIKGMESASG
                     ASALQTSSSSGLDIYA"
     gene            17280..18428
                     /gene="nhaA"
                     /locus_tag="R8X70_000841"
     CDS             17280..18428
                     /gene="nhaA"
                     /locus_tag="R8X70_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEF2928635.1"
                     /translation="MQAVKKIILSETFPGILLIFFTLLALLFKNSSLSVIYTDFFHAN
                     FTIGFDHFQIAKSLDLWINDGLIAIFFLCIGLELKYEILRGQLKNIRSVSLPIFGALG
                     GMIVPALIFSAINYSHEFAMKGWAIPTATDIAFAVGILMLLGNRIPSSLKLFLLSLAI
                     FDDLGAIVIIALFYTDQLSALAIIICLFCIFALLLLNYYHITHLSLYVLVGVVLWIAM
                     LKSGVHATLAGVIIALFIPLDTKNKKPYLHEVHKDLNPWVVYFILPLFAFANAGIDLR
                     DMHLGSVFSPVSLGIILGLFLGKQLGVFGFCYLAIKLKLAKLPENIKYGKFYGICILT
                     GIGFTMSLFIDGLAYKNSDIFEYADKLAILVASFLSAIVGFIYLKIIK"
     gene            18425..19594
                     /gene="nhaA"
                     /locus_tag="R8X70_000842"
     CDS             18425..19594
                     /gene="nhaA"
                     /locus_tag="R8X70_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEF2928636.1"
                     /translation="MNNIVHKLRTLVLNEAFGGVLLIVCTLLALLVQNGSFSEHYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKKEFLHGDFKNPKNIVLPFM
                     GALGGILIPALIFAIVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSVAAFVVVGIAIFMMLILNILGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIITAFFIPMQTKNGEAFLEEIYESLKFWLAFVILPLFAFANAG
                     VNLSNIDIGAIFSGVSIGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSNLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDIFNYADNLAILIASFCSGIWGFIYLKFFTTRP"
     gene            19603..20067
                     /locus_tag="R8X70_000843"
     CDS             19603..20067
                     /locus_tag="R8X70_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEF2928637.1"
                     /translation="MRFVIFFLVVIAFYIGGCSLAQNASHTPTNYNVDKETRLRMIAN
                     EWKKTPYVLGGTTKKGADCSGFAQSTLAQFNTRIPRTTTKQLRSGIKVSKSKLKTGDL
                     VFFKTGRGPNGMHVGIYMSKGKFIHLSTKGGVREVDLNSSYWKNRYIGARRY"
     gene            20069..20812
                     /locus_tag="R8X70_000844"
     CDS             20069..20812
                     /locus_tag="R8X70_000844"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEF2928638.1"
                     /translation="MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIVKFCLEALDFFSKFNIDMLIIACNTASAYALDTLRLKADFPIYGVIDAGVEATKK
                     ALLDKNKKILVIATKATIQSKEYQNRLQKQGFNNVDALATGLFVPMVEEGIFEGELLQ
                     SAMRYYFKGIETPDALILACTHFPLLANSLSVYFGSKTKLIHSGDAIVEFLKQRQKLL
                     LKEEKAKLHFYASSDVKSLENTAKIWLNL"
     gene            20822..>21571
                     /gene="map"
                     /locus_tag="R8X70_000845"
     CDS             20822..>21571
                     /gene="map"
                     /locus_tag="R8X70_000845"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEF2928639.1"
                     /translation="MIELKKPAEIEKLRVANQIVAKTLDFLENEIKAGMSLKQIDKMA
                     EDFILSLGAKPSFKGLYGFPGAICTSLNQVCIHGIPDEKIIKEGDILGLDVGSLIDGY
                     YGDAARTIAIGKISSTDEALISCAKDALYHAIDIIREGMRFKELSAALGEFIDSRGFV
                     PLRGYCGHGIGRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHF
                     NGKWDAGSVDELNSAHYEHCVAIINGRAEILS"
BASE COUNT         7302 a         3136 c         3673 g         7460 t
ORIGIN      
        1 aattgccaat ttataggttt ttttcctaaa ttttttaaaa tttcattagc ttttgaaaaa
       61 tgtttacaac ctaaaaagcc tgttctagct agtggactag gatgtgctgc ttctaaaata
      121 aaatgttttt ttgtatcgat taaagctttt ttggattttg cataatttcc ccaaagtata
      181 aaaataagtc ctgatttttc aagacttaac tttgaaatca ccgcatcact aaattcttgc
      241 caaccccacg agctatgact tgcaggcttt cccgcttcaa cgctaagaat ggaatttaaa
      301 agtaaaactc cttgttttgc ccaagaactt aaatccccgc ttttagaagg ttctatatta
      361 agatctgctt ttaattcttt ataaatattt aaaagactag gaggaatttt aaccccacaa
      421 ggcacagaaa aactaagccc catagcttga ttgggttgat ggtaaggatc ttgtcctaaa
      481 agtacaattt taagctcact caaaggagta agattaaaag cattaaaggt taaatttgaa
      541 ggaggataga taatggcttt attgtttaaa gcttgtatat agcgtttttt gatttctaaa
      601 aaatagcttt tgctaaattc ttcttttaaa aactctttcc aatcattatt tattttgata
      661 tcttcaatgt ttatagtaat ttctttcata aaaacttcca aaaataaatt aaaggtatat
      721 tttatcaaac aagccaagaa aaatatatta atttttactg aaataaataa aattaattaa
      781 taaataaaaa ttaaatataa aaagagttaa attatcctaa aagtctattt tatagtattt
      841 ctaaagaata aatattgtta accaattatt aaccaaaatt acaatatgat tatactgata
      901 tgagtacaag taataaagct tgtatgaaaa attaaattaa gaaaggtttc aaatgggaac
      961 aagaaaagag cacgatttta tcggggaatt agaaatttct gatgaggttt attatggagt
     1021 gcaaaccttt agagcggtgg aaaatttcaa tatttcacac gagaggctaa aggatttccc
     1081 acgctttgta agagctttag caagggttaa aaaagcagct gctatggcaa attatgaatt
     1141 aggtctttta gataaagata tccaagatgc tattattaaa gcttgcgata aaattttaga
     1201 gggcggatat tacgatcaat ttgtagttga tatgatacaa ggtggagctg gaacaagtac
     1261 aaatatgaat gccaatgaag tgatagccaa tatagcactt gagcttatgg gccataaaaa
     1321 aggtgagtat caataccttc atccaaacga tcatgtgaat ttaagtcaaa gtacaaatga
     1381 tgcttatcct actgctttgc atcttgcttt gcatgattat ctaagtgatt tggcaaaagc
     1441 tatggaacat cttaaaaaag cttatgagag aaaagcagaa gaatttaaag atgtattaaa
     1501 aatgggtaga acccaacttc aagatgcagt acctatgact ttgggtcgtg agtttaaaac
     1561 ttttgcagta atgatgggtg aagatataca aagagtttta gaagctagaa aactgatttt
     1621 agaaatcaat ttaggcggaa cagctatagg aacaggtatt aattctcatc ctaattatcc
     1681 aaaagtagta gaaagaaaaa taagagaagt aaccggcttt gaatacactg tggcagaaga
     1741 tcttatcgaa gcaactcaag atacaggagc ttatgtccaa atttcaggtg ttttaaaacg
     1801 cgttgcaaca aaactttcta aagtatgtaa tgacttaaga cttctaagca gtggtccaaa
     1861 atgcggtctt aatgaaatca atttgccaaa aatgcaacca ggtagttcta tcatgccagg
     1921 taaagtaaat cctgttatcc ctgaagtggt aaatcaagtt tgttacgctg taattggagc
     1981 ggatgtaacc gttacttttg caagcgaggg cggacaattg cagcttaatg tttttgaacc
     2041 tgtaattgct tatagtttat ttaattctat tgttatgctt gaaaaagcaa tgcatacttt
     2101 agcagataaa tgtatagatg gtattagtgc taatgaaaaa atttgttctg attttgttta
     2161 taactcagta gggatcgtaa ctgctttaaa tccttatata ggttatgaaa attcagccag
     2221 tattgctaaa gaggctatga gtacaggtaa gagagtagct gatatcgcac ttgaaagagg
     2281 acttttaagc aaggagcaaa ttgatgaaat tttaactcct gcaaatatgt taaatccaca
     2341 tatggaagct aaaaaatagc attttaggat ttaatatgga tataatgata attttgcaag
     2401 taatcgttct tcttggggcg atttttattg gtattcgtct aggtggtatt gctataggct
     2461 atgcaggagg acttggtgtt gttgttttag gacttgtttt gggaatgaaa ccaggaaata
     2521 ttccttggga tgtaatttta atcatagctg cagctattgc agctatttct gcgatgcaac
     2581 aagctggtgg gcttgattat atggttaggg ttacagaaaa aattttaaga tccaagccta
     2641 aatttattaa ttatcttgct ccagcttgcg gatggttgct tactatctta gcaggaacag
     2701 gaaatgcagt attttcttta atgcctgttg tagttgatgt tgcaaaatct caaaatataa
     2761 aacctagtgt tccactttca ttaatggttg tttcttcgca aattggaatc actgcttctc
     2821 ctgtgagtgc agctgtggtt tatatgagcg gggttttaga accactagga tggaattatc
     2881 caactttaat tggaatttgg atcagtacaa cttttatagc ttgtatgctt acagctttta
     2941 tagtgagttt aatcactcct atggatttaa gcaaagatag cgtttatcaa gaacgcttaa
     3001 aagcaggact tgttaaagat gcaggagcta ttttacatgg tgaagataaa ccaggtgcta
     3061 aactttcagt agcaattttt cttatcactg ttttggcagt tgtactttat gcaaccgcaa
     3121 tttcaagcaa tattaaatgg attgatcctg ttgtggttcc aagagatgca gctattatga
     3181 gctttttact tactgcagca actttgatca cttggctttg taaagttgaa ccaggtaaaa
     3241 ttcttgatac cagtgtattt aaaagtggta tgactgcttg tgtttgcgtt tttggtgtag
     3301 catggcttgg aaatactttt gttgcaggac acgaagcttc tattaaagaa gtagcaggcg
     3361 actgggttaa acaaacccct gctatgttag cagttgcatt tttctttgca agcatgcttt
     3421 tatattctca agcagcaacc gcaaaggcca ttgtacctgt aattatcacc gctttaggaa
     3481 tttcagcagc aaatccgcat gattcttata tgcttgtagc ttgttttgca gcagtttcgg
     3541 cactttttgt gcttccaact tatccaacct tacttggtgc tgtgcaaatg gatgatacag
     3601 gaacgactag aattggtaaa tttatattta atcactcttt ctttgtacca ggagttttag
     3661 ctattgcaat tgctgtagct ttaggctttg taatcgctcc tatgttaatg taatagccct
     3721 tttttgggct attatcaatt ttatgatata ttaaaattat aatttttatt tttggaatta
     3781 taatgaaata taaaacaatt gttttttcta ttttagcgat aattttttca gcatgctcta
     3841 ctcatcaaga acaaaatgta ttctatcaac aaaatttatt ctctcaaact tgcaataagc
     3901 aattttttca agagcaacaa gaaaagatca gtcaaaataa agatatgatt tttacaggtt
     3961 taaatacagg ttatatcgca agagattgta aggattttaa cttaagtaat tctatttttg
     4021 ataaggttga agattcttat aaatacgatg tggatttgca aagtttatcc aagaaaagca
     4081 caagagcact tgcatctact ttgataaatg agggtgtaaa tgattatcaa ggtgcttggt
     4141 atgaaagaac catgcttaat gtttataagg gtttaaattt tatgagtttg ggagattttg
     4201 ttaatgctag ggtggaattt aaccgcgcat tgatgagaca agaaaaggca aaagagtatt
     4261 ttgcttccga aattaaaaaa gcatatcaag aggctagcaa ggaagaaaaa ttaaggcaaa
     4321 atatcgataa taatataaaa attgtttcaa aacaatatga aaatcttttt aaagacttta
     4381 atgcacaaaa agattatacc aatccttatg taacttatat ttcatctata tttttcttta
     4441 tggattatga ttataaaaaa gcagcggatt tacttaaaga agtttatgtg ctgaatttaa
     4501 ataaagaaat agaaaaagaa tttaagattt ttgatcaata ttcaagcagt ttaaatccaa
     4561 aaaaattaaa aaaatatatt tttataatat atgaaaatgg attaagtcct gctttggatg
     4621 aatttaatct aaccttgcca tttatctttg atgattatat tacgactgct agtgttgctt
     4681 tacctatttt aaaaaagcgt aatgcttctt atgaaaattt aaatattgca aacaatcatc
     4741 agaaatttac aacttctaat gcttttgatt ttgatcaaat tgttgcgagt gaatttaaag
     4801 ccaatttgac ttcaatcatc atcaaatctt taatctcaag cactttaaaa acaagtttaa
     4861 atatggctgt ggctaaaaat gatgagagtg gaattttaag tcttgctaca aatattttta
     4921 gcattgcaac cacaagaagt gatttaagat tttggaattt tttacctaaa aatatacaaa
     4981 ttatgatgat tgaaaatgat ggatcggtac aaatttatga tgataaaaat caaaaaattt
     5041 attctagtga agtggatatt gataaaaatg tattgattgt agtgcgttct tttgcttctc
     5101 aatttcccgc tagggtttac aaaattgaaa actaaaagag tataattaca aaaaaaggag
     5161 aaataatgaa aaaaaatatt tttataatct ttagcgcatt tttcgcagta ttttttgcag
     5221 cttgtggagc gcctgtttat actgatggtt atgcaagtca aaaaaaacaa ggtgatgctt
     5281 taaccttagg acttgatagg gaagattttg aaaaaactgc tcaaattatg atagatagta
     5341 tgttaagcga tcctgctttt gccaatattc aaccaggtca aagaaaggtt attgctatag
     5401 gtaaaattat caatgatact ccccaacgca ttgatacaga taagctcatt agtaagatca
     5461 ctatagcgct tagaaaatca ggtaaatttg tcctaacaac agctgttgca gcgggtggag
     5521 ctagggatga aatgagtgaa gcagtaagag aattaagaga taatgatgaa tttaatcaaa
     5581 acaccatttc tagcaaagga actttggttg cacctgattt ttcaatcagc ggaaagatcc
     5641 gccaagacaa tgtcaagctt aagaatggcg atatacaagc agagtatttc ttttatctaa
     5701 gcgttacgga tttaaattca ggacttgctt attgggaaga tgaaagaacg attgataaaa
     5761 caggctcaag taaatcggta acttggtaat gaaaaaaatc tttttatttt taaccatctt
     5821 gagttttatg tgggcgcaag atgatgttat tatttatgat tatgttccgc tagaggatgt
     5881 taatttaagt tctttagatc ctgttcagag tcttaaaacc ttgcctcacc aaagaaataa
     5941 atttcaaaaa gtggtgcaag gtaatggaac aggagaaagc aaggaagaag ctttaaataa
     6001 tgctttaata gacgctttat cacaatttaa aggagtttct aatgtcaatt taagacaaga
     6061 gcttcaaagt attgatttaa gcttctctca tttaggacaa atttcacaaa aatctaaaag
     6121 tgtccttcaa aatgtaagta agggttatat cgatacttat aaagtagata aaattgatca
     6181 aaacggaacg ctttggcaag ttgaaatttc agcttttaaa tctttgtatc aaaacgataa
     6241 taaacctaaa ttagtaattt taaacgataa aaacaaagaa gaatcatatt taaaaagagc
     6301 tttgtatgat gctttttcac aggatgagaa ttttactctt ttggaaagag agcatgattt
     6361 taaagatgaa aataaaatta taaaaagcga agatggttct agcgaagaaa gctataaatt
     6421 aggcaatgtt ttgggtgctg attatatttt agaatttgag attttagata ttactcaagc
     6481 aaaacaaagt aagataagct atcaaaataa tacaaaagta agtataaata tagcctataa
     6541 gcttatattt tatcctacaa gagagcttgt tttttctaaa accttcaata caacttttac
     6601 tttatctggc gacagcaaaa aagagcaaaa aaattgggaa aacattgcgt tatttatgca
     6661 aagagaaatg gaaaaatcat tattttttga tactttagaa gaagataaca aacaagaagg
     6721 gaaagaaaat acttataaac ttcatgaaaa tggcggggtc aatcttggct tttaaattgc
     6781 tttagggttt attttaaact ctaaagtctt tcttaaattc atcaaatatt aaagaaaatt
     6841 tttgtaaaat taaaactttt ctagccatta aagcttttaa atccgaattt cggtgctttg
     6901 tggtacttac caaattatta aggaaaaagc aatgtatgct attattaaac acagcggaaa
     6961 gcagtataaa gttagcgttg gcgatgagtt aaagctagat cactttgaag ctgaaagcaa
     7021 agcaagtatt gaagtaagtg aagttcttgc tatcaatgat aaagaattaa aggtaggtgc
     7081 gcctttcgta gcaggtgcaa aagttgtttt ggaagtgatt aatcacggaa aagataaaaa
     7141 agttgtgatt tataaaaaaa gacgcagaaa agattctaaa cttaaacgcg gttttagaag
     7201 acaattcact cgcgttgtag taaaagatat taaagcttaa ggagtaaaga atggcacaca
     7261 agaaaggtca gggttcaact caaaataacc gcgattctat aggtcgtcgc ttaggtgtta
     7321 aaaaatttgg tggtgaattt gttagagcag gaaatatcat tattcgccaa agaggaactg
     7381 caactcatgc aggaaataat gtaggcatag gaaaagatca cactatcttt gctttaattg
     7441 atggttttgt gaaatttgaa agaaaagaca aagacagaaa aaaagtttct gtatatcctg
     7501 cataagtttt tagggcgttt ttacgcctta gaaactttaa atttataaat ttaacttcta
     7561 taatttattc taatttagct ttataaattt aaaatcaaag gcaattataa tgtttattga
     7621 tagtgttaag attactttag cttcgggcga tggtggcaaa ggcgcggtga gttttcgtcg
     7681 tgaaaagcat gttcctcttg gcgggcctga tggtggcgat ggaggaaatg gcggggatat
     7741 catcttcgtt tgcgataata atacacatac acttgtaaat tttaaaggta aaagagagct
     7801 tcgcgcgcaa aatggcgcag gtggaatggg acgcaacaaa aatggaaaaa agggtgaaaa
     7861 tttagaactt attgtccctg agggaacgca agttattgat gcgcagacta atgaagtttt
     7921 attagatctt acaaaagagg ggcaaagaga actttttcta aaaggtggca aaggagggct
     7981 tggaaatacg cattttaaac atgcaactaa tcagcgccct gattatgcac agccaggcat
     8041 taaaggcgaa agtcgtttag taagacttga gcttaagctt atcgccgatg taggacttgt
     8101 aggctttcca aatgtgggaa aatccaccct tataagtgta gtttcaaatg caaagcctga
     8161 aatcgcaaat tatgaattta ccacgctcac accaaaacta gggcttgtag atgtggatga
     8221 gtataattct tttgtgatgg ctgatattcc agggattatc gaaggtgcaa gtgggggcaa
     8281 aggcttaggg cttgcatttt taaaacatat agaaaggact agctttttac tttttgtact
     8341 agatcctatg agagaaatgc ttttaaaaga gcaatttata gtgttaagaa aagagcttga
     8401 gaaattttca aatgagcttt ttggacgtga gtttggcata atgatttcaa aaagtgatag
     8461 tgtgaatttg ggtgaagatt ttgccgagca gatcgcccaa aatatagcga atttagaaga
     8521 atatttaaaa agtattgata atccacaaag ctttttaatc aaagtatcaa gccttgaaaa
     8581 aactggactt aaagagctta aatttatgct tttagaaaag attaaaaaat taagagaaaa
     8641 gcgtgaaaaa aaggtgataa aataatcacc tcgagatatt ttaattataa tcttgattta
     8701 tagcaaaatt aaatttttaa ctttttaatc tcattttcaa gcacaccata aggcgttaag
     8761 cctatgaatt tttcatctat cttgccttct ttaaaaaagc taagtacagg tactccgtat
     8821 atttctccaa ctgcacctga gagatatttg gctgcttttt tttcataaaa taaagccaga
     8881 tgcgacaaac ccttttcatc tgcccaagct ttagcatcct ttgcatcttt agcatcgcct
     8941 agtactataa aaatattaaa atcataattt ttagctaaat cttgcaaaat aggaatttgc
     9001 tctttacaaa ccccacaatc tttagtaaaa aatactaatg caaaattttg tgtttgatcg
     9061 tctaatttta aacttttttc aaaaccatta taagagaaat tataaatttt attgctattt
     9121 aaagctttaa aattttctcc actatcgcaa gctataaaaa ataaagctac aattaaagca
     9181 aagagataag tttggattcg aaagtttgcc atggtttttc tcctaaaatt ctttctttta
     9241 taatcccatc tttaagtatg atggtggttg gagttgcaaa tacagcgtag cgatcattgg
     9301 tgattttaag atcatcggtt aaaactttga tatttttaaa atttaattgt tcggccaaaa
     9361 cctgaacgac ttcaacttta tctaccgaat ttatagcata aacgctgatt ttatttgggt
     9421 gttcttgcat aaatttatcc aaagaaggca gctcttgcaa acaagaagga catccatttt
     9481 gaaagaaaac taagactttt atattgcttt tatcatcagc taatttaaca gcctttccta
     9541 aagtatcttt ggctgaaatt tcagctccta tttggccaat tttaccttgg tcttgatttg
     9601 tgtcaaaaga gcaggcattg agcaaaaaaa gacttatgaa aaataaaaat acttttttca
     9661 ttttaaaatt ccatgttgca agataagggt gcgatctgca aattttgcta attcggaatt
     9721 gtgtgtgatc aagactatgg ttttaccctc attttttaat ttttgtaagg tttcaagaac
     9781 gattttttca ttggcttcat ccaaattccc tgtaggctcg tcagcaagta aaatttcagg
     9841 attgttaatc aatgctcttg ctatacaaac tctttgttgc tctccaccgc ttagttggct
     9901 tggtaaatgg ctaaggcgat gtgaaagccc tactttttca agtacagctt ttgcatcctc
     9961 ttcatctacg ctagaatgat agtattgcga aagtataaca ttttctaagg cactaagata
    10021 aggaatgaga tgaaattgct gaaaaataag cccgattttt tctcggcgca aagtgatttt
    10081 ttgctcttca tttatttgtt ctaaatcttc attatctaaa atgtatttac cactgcttgg
    10141 atcatccata agagataata tatttaaaag cgttgatttt ccacttccag aaggacccat
    10201 gatggcaagc cattctcctt tgtaaatatt taaatttata ttatccagtg cttttacttt
    10261 accaaatttt ttgcttaaat ttttaatttg tataagttct ttcattattc acctttcaaa
    10321 ttttcacaga cattgatttt taatgctttt tttataggaa aaaaggcagc taaaaaagca
    10381 aaaaacaaag aaacaattaa agccataaat atagccttaa atctaaaatc tatacttgca
    10441 ttaaaaatca aatatccaaa tatatttgct aaaaatatcc cacaaaaagc tcctataatg
    10501 ctagcaaaaa gactaatgat aaaatattca caagcaaaaa gcttgaaaat ttcacttttt
    10561 ttagcaccca aggctaaacg caaggcaatt tcttttttac gcgaaaatat aatcgagctt
    10621 agagtggtgt ttacacttgt tgtgactatg attaagacaa caagtatgat taaaaacatt
    10681 aaagctttta ttttgtctaa aactaggcct tcgcttaaag atactgatga aataggtttt
    10741 gcattaatgc tttcattgct aatatttttt gtttttgtat ttatctcatc aaaattccca
    10801 taaacaaccg cattagcata ctgaattcca aaggtatcgc ttaaattttg tactacgctt
    10861 aaaggcgcta aaactatgct gtctaattca tcattactta agagtatgcc ttttatcgta
    10921 agcttggtag ttttgccatt ttctgggttg taaatttgaa gttcattgcc tactttaaat
    10981 cctagttgtt tggataaatt aatacccaaa aaagctgaat tttcatcaaa atcacttaga
    11041 gaaaagctcc cttctttaac ttctataaaa ggcttagtta tctttaaggc tctaaaatct
    11101 gtacccaaaa ctactccact agtgctaccc aaatttaaaa atgtatacaa aaaaggagtt
    11161 aaggctctag cttttaaatt cttttttgct tcttcatagt cttgatttaa gataagttct
    11221 ttatcatttt taggctcgat gataacattt gctccataag cttttaattc tttagaaagc
    11281 tttgtatcaa tatcaaaata aatatttaaa aaagccgagc aagttagtgc tcctataaaa
    11341 acacttaaga caataataaa aagtctttga taagaaaaag caatgctttt aaaaagctca
    11401 tttaaaaaaa acttatctac cataaagaac tcctgcggga gaaagatttg caatattttt
    11461 tataggaagc aagcatccaa gtatagctat caaacctgca aatacaagac ttaaaggcaa
    11521 ggctataaaa gcaatgttta taaaatatcc aaaaattcca aggctgataa gctctgaaag
    11581 tcctatgcca aaaataaatc caaatacagc agaaactaaa gctatgatca aattttcacc
    11641 tgcaaaaagt aagtaaattt gaaatgtatt tgcccccagt acttttaaaa gccctatttc
    11701 tttttttctg cggtgaattt cagaactcat taaacttgat atagcaatac ttgcaacaat
    11761 aagacaaata atacaagtaa tagccatcaa agactgaatt tttttaacaa ccaaactttg
    11821 tgcatcgctt atggcattga gtgcttttgc atccgctcct ggcaagccat cgctaatttg
    11881 actagcaatt gatcctacat aagctgagca ataccattta tcgtattcta tttgatcgag
    11941 tttttcctcg cccattcggc gtaccttttc agaaagggct gattcaggta tggtaaaagc
    12001 tcttacttca gcacttgcat ataagccttt tttttctaat aattcttgag ctaaatttaa
    12061 aggagtgatg attttgtttg acattttagg attggcgtgg agtaaaattc ctacaatttt
    12121 tacttctttt gaaattttat tctctcctat gagttgtatc gtgtcattga ttttaagatc
    12181 gttatttttg gcaaaatctt cgcctagcat gatttcattg ctgtcatctt tagcccattt
    12241 gccttgcact ttcaaataag gataaagact tttaatacct gtgataaaat catcatcatc
    12301 ttttatttca atcgcttttt gaaaataagt accataaagg agtatttttt ttgaggaatt
    12361 attgcttttt atttctatct ttccttctaa aaaaggagca aaggctgtga tattgtttcg
    12421 ccaataaata tcttttagca tatataaatt tttttcttct aaatagtttt tattttttaa
    12481 aggttcgtaa agctcattgc ctatttctat gctaaggctt gagcctttag gcaaaaccag
    12541 tatattagat ccataacttt taagttgctt agttacttca tcgcctatac ttagagtgat
    12601 atttaacatt gtacatagca aaagcgtagc caaaaaacaa gtaagaaaag ctagaaattt
    12661 ttgaatttta tttctaaaga tagaatgagt tatcatttta actagcatta tttctccttt
    12721 ggattaaaaa taaagcttct gtatcttcta catatttcat aggatctttc ttaaattcct
    12781 catagttttt ttcatttgaa aaataataag ttataccttt atagctgtaa gaaaaaggtg
    12841 cttgagtgtt aatgatctta tcttttgaaa caggatcttg cacttgtata tctttaattt
    12901 gactaaaata attagatcct gctataacat ctttaacatc tatggtgatt ttttcaccat
    12961 cataatcgta ttttaatggg ataggattgc aaccccctgt ttttcctaca ctcggtagaa
    13021 aaattcgcac attgcacgaa atgcaaatta attccccttc ttttttaata taacccatat
    13081 ccccacaaat agcacaagca tcaaaaacag ccacaggaga atccctatct tctcttttat
    13141 tgatgaggaa aaaccttatc actttgcctt gctcgcttat ataagcaaaa cgatgaagtt
    13201 tgttatctct taaaagcgct acatcaaaga taaatttgcc atttttatca ggtaaaagtt
    13261 ctgtaggctc gtctatgctt aagggtttag aacttaccat aaaaaagtat aagatgatac
    13321 aaaaactcaa aatacaagag ataaaaacac tagaaaaata gcgatttatg agagtatttt
    13381 ttgcttcatt tttgcggtaa acaatatcta aaatttgctt ttttacaata ttttttttgc
    13441 gaatttgcaa acttaaaaat gctaaaaaaa tgatgaaaaa taaataaaca taaattccaa
    13501 aaacaccaaa ataattactt tttccaacaa aacttactaa aaaagtatga gtttctatga
    13561 aagaatttcg catcagtgta agcaatatat ttgctaaaac cttatctcct tctataaaaa
    13621 taaggattaa aaaaagtata aaacttgctt ttttgttgat attcttttgc cactttaaaa
    13681 agaagaaaat taaaatacaa attaataaag ctaaagcaat aaaacctaaa gaagaaatgg
    13741 cttcgctatc gattaaaaca ccattaaata taggaaaatc ttgagttaaa ttataataat
    13801 gcaaagctat gcaaaaactc aaatttccta gtaaaataaa acttaaaatt tctatttttt
    13861 gccaaaaata aaacacaaaa ctcaaaagca aacaggctat aaaaataaaa ttgaaattaa
    13921 atatcaaatt ctcagttttt agaaattgtg ctgcaataaa aaaagcaaaa tatccaaata
    13981 aaaagcctaa aaaaagagct aaaaagcttt taaaaatata tcttttatcg ggcgtaataa
    14041 aagccattaa aatacttaag ggcaagatac tagaaagaaa atgcacaaaa tatatactca
    14101 taatttactc tttaaacatt gttattttga ttttaaaata aaaataaaaa taaaaatatt
    14161 taaacactcg gaaaatccga gtgtaaaatc attttggtgt gcctgtgtat ttgaatttat
    14221 aatcaacctt aaaaggctca aaccacttac ccacgcctgt ttcttcatca acatggcgtc
    14281 caaaaccttg tttttctgga tttgagatat aaaaagtaag ttcataattt cctacgccaa
    14341 agccaccttt tttatctttt tccatagcaa tatttgcacc atagtgagga ccatcatcag
    14401 ccaccatagg catcaaagtt ccgcgtttaa tcgcacctgt gtcggtattt ttaagttcat
    14461 aagctatagt taaataaggc atccaaaaac cttctggaaa accatttgga ttgtttttaa
    14521 gtgcgtgaat gtcagcttct aggtgaatat ctgctaaaga tgcagctaaa tcaatacctc
    14581 ttggctccat ttcaataggt tgtaaataaa cagcggctat ttccatgcca ttaagttctt
    14641 ttggatcgcc aattggcact tcgcctgcaa ataaatttgt actaataacc gcagctgcag
    14701 caactactga taaaactttt tttatcatga ttttactcct ttttttgaaa tttgttttgt
    14761 tatcaaaatg ccaataatta gcataattaa aactataaat tgagggatta aagtttcata
    14821 gtaaggataa attccaagcc ataaaatcgg ttcaaaattc ataggtataa gactaggaat
    14881 aatgactttt ccttctatga gttcagctat gcctttgcct gtaaaaacaa aaaccatgta
    14941 aaaaataatg taagaagtga tatagaaaaa ttgttttaca ggtatgcgaa tggctcctgc
    15001 ttttaaaaga aaatataaaa caataagtat taaaattcca agtccaagcc cgccaaaaac
    15061 agcaccaaaa tcagtgcttg ttttagcatc aaaaagcaag gcttgataaa aaagcacagt
    15121 ttctgcacct tctctataaa cagctaaaaa tacggtgatc caaagggttt ttgcactatt
    15181 gtttgatata gcatctatag caccttgttt gataaagctt gtccattttt tattttgtgc
    15241 gtttgaaagt agccaaaagc ccacataaaa gagtagtaat acggctataa gcatggtaat
    15301 accctctata agctctctac tttgtcctgc attttctttg aatagccaag aaactccaaa
    15361 agcggtaaca aaacttaaaa tcactcctgt aaaaagagca ctataggcga tatttaaacg
    15421 atttttgtta ccactttgta caagataaga aacaatggct acaacgataa tcaaagcttc
    15481 caagccttca cgtaaaataa tacttaaagc ccatataaac agcgaataag gagtagaatc
    15541 ttgaatttta tccacactgc ttgctatgag ttgttctaag tcattaaaag tagcttcaag
    15601 ctctttttta tctgcacttg ctttaatcag tgccacacct ttggaaaata aactttctat
    15661 tttaagtttt aagccgctat ctacagcacc gattttattt tccataccgc ttgcttcaaa
    15721 aatatctaga taaattcctt gtaaatcatc taccatagaa gtgctaaagc catcataatt
    15781 ttttaaaatt tcatctaaag caagtttgat attattagaa actttggcat aatctttgcc
    15841 ttttgtttca tcattaaagc ctgaaatttg caaacttgaa agttctgaat ttggaatttg
    15901 taagaaaaca tcaaaaattt gttcttctat gttatctaag ccatctctta agcctttttc
    15961 atctattttt gcatcgttga tttggcgtat aagggtgcgt atggcttgtt gaattttttg
    16021 atcgtttcct gctttggtaa atttatttac taaaatttct actttggtat tgcgataatc
    16081 actaaataag gcatcattta aaaaatcttt actagtttgg tagttttttt ctttaaaagc
    16141 attagctgcc tgtgaaaatt tggtagagat attatctagt ataaattgca atcttgcgtc
    16201 cattgcagcg gcagcttgta aatcattatt tatactatca tttatagttt cgttttgggt
    16261 actagaagaa gaattagttt ttgctaaatc atttttatca atacccatca tttgggcaat
    16321 caaagcttct gcttctgctt cacgcttggc attggcttgt atgcttgatt tttcagctgc
    16381 tgctttatcg taatttgtat cacttgcttc tgcttgtaag cgataaccat tttgcaaaat
    16441 cggcgcaact tcatctaaat cataataaag actttcaatt aaagcatcaa tttgctctat
    16501 gggcgcttta tctttataca agcgacgcaa atttgtaaat tttctttcca tggtgatggc
    16561 ttttttgcct atatttcttc caatggaacc ttccatattt tcaaagtgtt gaaaataagc
    16621 atcttcgcta agttttttag cctttaaatt atcgcccttt tcatagcttt ttatactctc
    16681 ttctaatata tttttaatag tattagcttc tgctacataa tcatcaactc tagcaaaaac
    16741 agaatttgct agaaagagta tagagaaaaa aaacaaaatt ttaaaaaatt tcatacattt
    16801 ccttaaaaaa tataaaaaat aatatttatt atcaatattg atagaagtat aatacaaacc
    16861 atattaaaca aaaataaaaa ttatttttat cgaatttaaa gggttaagtg tttaaaattt
    16921 tttccgatac tacttaagtc ttcatacata aattatactt aggagggtgt tatgatttca
    16981 gacgcaacta tgagtaatgc taatttatta acagcggtaa atacttcagt tttgaaaaaa
    17041 tcaatggata caaatgaagt gttgatgaat gagcttatca aaggtatgga gagtgcatcg
    17101 ggggcttctg ctttgcaaac ttctagctct agcggtttag atatttacgc ttaagtatct
    17161 ttaaatttag ggtgtgcttt acaccctaaa taaggatata tcttgttaaa ataatcattt
    17221 ctttaatatt ttttggttat aataattaac atattgaatt ttataatcaa ggggcgtaaa
    17281 tgcaagctgt aaagaaaata attttaagtg aaacttttcc aggcattttg ctcatatttt
    17341 ttactctctt ggctttactt tttaaaaatt cttccttaag cgttatttat acagattttt
    17401 ttcatgctaa ttttactata ggatttgatc attttcagat tgctaaatct ttggatttat
    17461 ggataaatga tggtttgatt gctatttttt tcctttgtat aggacttgaa ttaaaatatg
    17521 aaattttacg cggacaactt aaaaatataa gatcggtttc tttacctata tttggagctt
    17581 tgggaggtat gattgtccct gctttgattt tttctgctat taattattct catgaatttg
    17641 ctatgaaagg atgggctatc ccaacagcta cagatatagc atttgcagta ggtattttaa
    17701 tgcttttagg aaatagaatt ccttctagtc ttaagctgtt tttactttct ttagctattt
    17761 ttgatgattt gggtgctatt gttattattg ctttgtttta tacagatcag ctttcagctt
    17821 tagcaattat tatttgtttg ttttgtatat ttgctctgct tttgttaaat tattatcaca
    17881 tcacccatct ttctttgtac gtgttggtag gtgttgtgtt gtggatagct atgcttaaaa
    17941 gtggagtgca tgcaacttta gcgggtgtaa tcatagcttt atttatccct cttgatacta
    18001 aaaataaaaa accctatctt catgaagtgc ataaggattt aaacccttgg gtggtttatt
    18061 ttattttgcc tttatttgct tttgcaaatg cgggtattga tttaagagat atgcatcttg
    18121 gttcagtatt ttctcctgta agtcttggga ttattttagg actattttta ggaaaacaac
    18181 taggggtttt tggattttgt tatttggcta taaaattaaa gcttgcaaaa ttacctgaaa
    18241 atattaaata tggaaaattt tatggtatat gtattttaac aggcatcggt tttacgatga
    18301 gcttgtttat tgatggtttg gcttataaaa atagtgatat ttttgaatat gcggataaac
    18361 ttgctatttt agtagctagt tttttaagtg ccattgttgg ttttatttat cttaagatta
    18421 ttaaatgaat aatatagtac ataaattaag aactttagtt ttaaatgagg cttttggcgg
    18481 cgttttactt atagtttgca ctttgcttgc tttgcttgtg caaaacgggt cttttagcga
    18541 acattatcga gaatttctaa atttaaaagt cggatttagt gtaggtgaat ttgagcttaa
    18601 caagcctttt ttactttgga taaatgatgg gcttatatct atatttttct ttgctatagg
    18661 gcttgagctt aagaaggaat ttttgcacgg agattttaaa aatcctaaaa atattgtttt
    18721 gccttttatg ggggcattgg gtggtatact tatacctgct ttaatatttg ctatagtcaa
    18781 tataggcgat gcttacactt taaaaggatg ggctattcca acggctacag atactgcatt
    18841 tgctttagct attttgatga tgtgtggcaa acatattcca tcaagtttaa aaattttctt
    18901 actttcttta gctatttttg atgatgtggg tgctatttta attattgcga ttttttatac
    18961 aaccaagctt tctgtggctg ctttcgtagt tgtgggtatt gctattttta tgatgttgat
    19021 tttaaatatt ttaggaataa caagaaagtc tttttatttt atttgctcag ttattctttg
    19081 gattagtgtt ttaaaaagtg gtgtgcatgc aactttagct ggaattatta cagcattttt
    19141 tataccgatg caaactaaaa atggagaagc atttttagaa gaaatctatg aaagtctaaa
    19201 attttggctc gcttttgtta tcttgccttt atttgctttt gctaacgctg gagtaaattt
    19261 atccaatatc gatataggag caattttttc aggtgtaagt ataggtattt tcttggggct
    19321 ttttgtgggt aaacaagtgg gtgtattttt gttttcttat ttggcaatcc gctttaaatt
    19381 tgcagccttg ccccaaggtt caaatttgaa acaactttat ggggtttgta tacttacagg
    19441 aattggtttt acaatgagtt tgtttatcga tggcttggcg tatgaagtta gcgatatttt
    19501 taattatgca gataatcttg ctattttgat tgcttcattt tgttctggga tttggggttt
    19561 tatttatctt aaatttttta ccacgcgtcc ttaaggaaat ttatgagatt tgttattttc
    19621 tttcttgttg tgattgcttt ttatataggt ggatgcagtt tagctcaaaa tgcaagtcat
    19681 accccaacaa attataatgt tgataaagaa acaagattaa gaatgattgc taatgaatgg
    19741 aaaaaaactc cttatgtttt aggcggaaca acaaaaaaag gagccgattg ttcgggtttt
    19801 gctcaaagca ccctagctca gtttaataca cgcataccac gcactacaac aaagcaacta
    19861 cgctcgggta taaaagtttc taaatcaaaa ctaaaaacag gagatcttgt tttttttaaa
    19921 acaggtagag gaccaaatgg tatgcatgtg ggaatttata tgagtaaggg taaatttatc
    19981 catctttcta caaagggtgg agtaagagaa gtggatttaa atagttctta ttggaaaaat
    20041 cgatatatag gtgctagaag atattaagat gaaaataggc gtttttgata gtggtgtagg
    20101 tggacttagt gttttaaaat cactttatga ggcaagactt tttgacgaaa ttatttatta
    20161 tggagatact gcccgcgttc cttatggggt taaagataaa gatactatag tcaaattttg
    20221 tcttgaggct ttggattttt tttcaaaatt taatatcgat atgcttatta ttgcgtgcaa
    20281 tactgctagt gcttatgctt tagatacctt aagattaaaa gctgattttc ctatttatgg
    20341 ggttattgat gcgggtgttg aggctactaa aaaagccttg ttagataaaa ataaaaaaat
    20401 tttagttatt gccacaaagg caacaattca gtcaaaagaa tatcaaaatc gtttgcaaaa
    20461 acaaggtttt aataatgtag acgctttagc tacgggtctt tttgtgccta tggttgaaga
    20521 gggtattttt gaaggagagt tgttgcaaag tgctatgcgg tattatttta aagggattga
    20581 aactcctgat gctttgatac ttgcttgtac tcattttcct ttgctagcaa attccttgag
    20641 tgtttatttt ggttcaaaga caaagcttat tcattcagga gatgctatag tagagttttt
    20701 aaaacaaagg caaaaacttt tgttaaaaga agagaaagca aaattacatt tttatgcttc
    20761 aagtgatgtt aagtctttag aaaatactgc taaaatttgg ctaaatttat aaggaaatac
    20821 aatgatagaa ttaaaaaaac cagcagaaat agaaaaatta agagtagcaa atcaaatcgt
    20881 cgctaagact ttggattttt tagaaaacga gattaaagcg ggtatgagtc ttaagcaaat
    20941 cgataagatg gcggaagatt ttatcttaag tcttggagca aaaccttcat ttaaagggct
    21001 ttatggtttt cctggtgcaa tttgcacttc tttaaatcag gtttgtatcc atggaattcc
    21061 tgatgaaaaa atcatcaaag agggtgatat tttaggactt gatgtgggaa gtttgattga
    21121 tggatattat ggtgatgcag cgcgtactat agctataggt aaaatttcat ccacagatga
    21181 ggctttgatt tcttgtgcta aagacgcttt atatcatgcc atagatatta ttcgtgaggg
    21241 tatgcgtttt aaagagcttt ctgcagcttt gggagaattt atagattcaa gaggttttgt
    21301 tccgcttcgt ggatattgtg gccatggtat aggacgcaaa cctcatggag aacctgaaat
    21361 tttaaattat ttagaaaaag gcgcaagcgc aaaaagtggt ccaaaaatta aaaatggaat
    21421 ggttttttgt atagaaccta tgatatgcca aaaggatgga actccaaagc attttaatgg
    21481 gaaatgggat gcagggagtg tagatgagct taatagtgct cattatgagc attgtgtggc
    21541 tattattaat gggcgcgcag aaattttatc t
//
LOCUS       DAQUWA010000026        21385 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.026, whole genome shotgun sequence.
ACCESSION   DAQUWA010000026 DAQUWA010000000
VERSION     DAQUWA010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21385
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.026"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(33..239)
                     /locus_tag="R8X70_000846"
     CDS             complement(33..239)
                     /locus_tag="R8X70_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928640.1"
                     /translation="MPNNHDDIINIKYKKSTKYPLMPLEKRAAQFAPFSVLKGFDEAI
                     EKKKKEMERKLEKSIYNKRVIMFL"
     gene            complement(232..1688)
                     /locus_tag="R8X70_000847"
                     /pseudo
     CDS             complement(232..1688)
                     /locus_tag="R8X70_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807506.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase"
     gene            2292..2942
                     /locus_tag="R8X70_000848"
     CDS             2292..2942
                     /locus_tag="R8X70_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HEF2928641.1"
                     /translation="MKKLIILPLLATLALADYTQYKPSEDFAKYFTKQSCSQVLDKFY
                     YLNCYDYNLKGTKAVAYRLEAENLKGEQIKKRPRFEDDTNIPKKYRTTWSDYRNSGYD
                     RGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
                     NLVNYDNNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVENENIRSYQVKCQN"
     gene            complement(3582..3995)
                     /locus_tag="R8X70_000849"
     CDS             complement(3582..3995)
                     /locus_tag="R8X70_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928642.1"
                     /translation="MRNYYISEGVKALFSVYFKDQTEENFIKALNEFAKESQINSQEI
                     KDKSFREFKEAISKLPTIDLLNTRFDKPEDSVCAKLDKLEYSIGAKLDKLENKLDSFK
                     REVRTYVIILAALMFILQPTIFDLILSIFKSFLRQ"
     gene            complement(4026..4640)
                     /locus_tag="R8X70_000850"
     CDS             complement(4026..4640)
                     /locus_tag="R8X70_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928643.1"
                     /translation="MKNNEIFTKAFRFTDEGDLVITLTPDFECFLAENQIKNSQDFAD
                     KFSDTLDENRYFDIPRILCYKEDLKSTPFEDFDNEYFVFVPNDTNIDLDSLSYAVSAL
                     NPSNQKDFLIEAMKTKIKKGEINKENLKENLENKIKYISEQIPIVFEGKVGEDTIEKL
                     LKEKETIVLPNVTKYAKNSINEYFENEKDEILEELNAICKKNMI"
     gene            complement(4660..5025)
                     /locus_tag="R8X70_000851"
     CDS             complement(4660..5025)
                     /locus_tag="R8X70_000851"
                     /inference="COORDINATES: protein motif:HMM:NF022151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2493 domain-containing protein"
                     /protein_id="HEF2928644.1"
                     /translation="MKLLVCGGRDYTDIEHFNKEMDNVFSLYQNQIDTIIEGGARGAD
                     NMAKNYALKNKINLVEVKADWQHFGKAAGPIRNQRMLSMLDSNDCVLAFWNGVSKGTK
                     NMIEIARNKNIKVIIINIK"
     gene            complement(5034..5177)
                     /locus_tag="R8X70_000852"
     CDS             complement(5034..5177)
                     /locus_tag="R8X70_000852"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928645.1"
                     /translation="MCIEELASRGIYAYEHDGLVVVSIDEIDQSFILHDGEVIARAKK
                     CED"
     gene            complement(5262..6428)
                     /locus_tag="R8X70_000853"
     CDS             complement(5262..6428)
                     /locus_tag="R8X70_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEF2928646.1"
                     /translation="MKYDLERLNNIPIMDVLESLGAISDRNKKIIHCFNITAHKNNDH
                     NASLGVYENTNTCHCFACGVGGNPVNVVKIMFNGNFKEACEYLHTQFNIPFLDGVQAT
                     YKKAFEKPKPKAKDYVFFDPNKEYVEVEKLLPYVQSYSKLTKAQRLKLIYTTIYRFSL
                     STEQKAKNLYYIKRGIREISLVKKIGFLSFDNIKDLENLLKKYFPMEDLIEFKIFSRE
                     KQVWKYAFNVAFVPNFDLYTDMIVGFSLRVIDSTYNGAKEVNISCGNIVFATPFGLEN
                     KPLKECEKVVITEGHIDCLSAKSYYKQDSKTLFISFAGTFSFREEILTVFKGKRIMLC
                     FDKDEAGLNGEKSLSEKLNLLNIENHSLTWDIVDGKDLNDLLLADKMGSIKLIA"
     gene            complement(7136..7609)
                     /locus_tag="R8X70_000854"
                     /pseudo
     CDS             complement(7136..7609)
                     /locus_tag="R8X70_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794641.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(8028..8267)
                     /locus_tag="R8X70_000855"
     CDS             complement(8028..8267)
                     /locus_tag="R8X70_000855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928647.1"
                     /translation="MPFLHVNYDVFWQIKAYEFIKIFNALSNCTFGVVRAYFRRKKVN
                     GILEEKENTMKKYKYTPKTKEELKALVETVRITNG"
     gene            complement(8317..8742)
                     /locus_tag="R8X70_000856"
     CDS             complement(8317..8742)
                     /locus_tag="R8X70_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928648.1"
                     /translation="MLTYTNELVVARLARALAYKEAKKDKSKVDFLINLFKKQIQNCI
                     KATEHFTDRVSQRFEEVENDTLSVAISRAIRNTSPLQHGADYHIATAQKYLDKDSNIV
                     VVLERQGEFGAVLVTTYKRGQENLLSDEELADLKKRGVL"
     gene            complement(8904..9275)
                     /locus_tag="R8X70_000857"
     CDS             complement(8904..9275)
                     /locus_tag="R8X70_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEF2928649.1"
                     /translation="MVSSKIVKYGELWIADFEPQVGEEITKKRPALILSNNLLNSNQK
                     LVFVVPLTTWQEEFKKRIWLIKVDKNNINNLNVDSAINCSQIKSFSKDRLIKKIGEVD
                     ERIMENTRNMINVFLSPQFNS"
     gene            complement(9262..9435)
                     /locus_tag="R8X70_000858"
     CDS             complement(9262..9435)
                     /locus_tag="R8X70_000858"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928650.1"
                     /translation="MSKTQILTDALKQMYEKQEIEKIKRLLIMGFKDAENDEEYQKEQ
                     LELAEAGVGDGII"
     gene            complement(9568..10059)
                     /locus_tag="R8X70_000859"
     CDS             complement(9568..10059)
                     /locus_tag="R8X70_000859"
                     /inference="COORDINATES: protein motif:HMM:NF012487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEF2928651.1"
                     /translation="MLKMILGTMKAGKSAKIIEEASNILFQDEVIIIRPSCDIREFFT
                     RKHKNSDLQNFTFGNENTSLDSYSFIFVDEIQFFKKDFLEKIINLSRKKEIFITVAGL
                     INDVEGNSWGNVETLKSYADEILHLKADCDCCGRKESAAFHVGDGGINNNYFVFCEEC
                     YKM"
     gene            complement(10072..10284)
                     /locus_tag="R8X70_000860"
     CDS             complement(10072..10284)
                     /locus_tag="R8X70_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928652.1"
                     /translation="MSGFKIIPSKHFAERLQERKVDLSLVASIYQEIAKNPFQKIYKL
                     MNSNSAIVFAVNRDNGVITIITGYPV"
     gene            complement(10281..10574)
                     /locus_tag="R8X70_000861"
     CDS             complement(10281..10574)
                     /locus_tag="R8X70_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928653.1"
                     /translation="MNFKCYIVEKYEIVYGKGHFQNETQKLEDLFEKLQIDYSEPSDF
                     IIEIPTEQLFSLKLSNYQLDSDELIFMTNLIKTAKTAKYCKDFGFIRIDWRGQ"
     gene            complement(10584..10883)
                     /locus_tag="R8X70_000862"
     CDS             complement(10584..10883)
                     /locus_tag="R8X70_000862"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928654.1"
                     /translation="MGYRCHIAKHYEVEYENGSYFNNSENKLLSLLEKVGLLEDAWMN
                     EGHEDLEVSRQDTLSLDLEEYVLDEEERGFLEDLIEVAKTAPYAKKSGFIRLSWF"
     gene            complement(10949..11326)
                     /locus_tag="R8X70_000863"
     CDS             complement(10949..11326)
                     /locus_tag="R8X70_000863"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928655.1"
                     /translation="MKKINILASSKNSKKLEEGFWFTKDKTIALGNDDSNLDEVYEHL
                     KECIDKSKDLSKFDGECIRVIISANGNYFDEGSESVRFRFNGCGSLGVFHNWECDKHK
                     AFSPLVWKLWSFLHEQIGAAKVA"
     gene            complement(11420..11833)
                     /locus_tag="R8X70_000864"
     CDS             complement(11420..11833)
                     /locus_tag="R8X70_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928656.1"
                     /translation="MKYKKKVFSAINTSFKIAYCYVVEAKCNDHLSEHLRLGIFTSFE
                     EALTFIAKNFYKTTKSKISYSRETNNTWIIDNCEIKNQSIRHRVTDCCIENIAVDARE
                     IRIRVDTNNFIILDNGKLIEISKPFFHDQVAYLNS"
     gene            complement(11849..12454)
                     /locus_tag="R8X70_000865"
     CDS             complement(11849..12454)
                     /locus_tag="R8X70_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928657.1"
                     /translation="MTLRELLNFLSDPKNEAFYLNRIKIPMYLVVNPLMLEDEFFVYD
                     DSFKKIWVGKIFKFLSNKSITPSYFIRKDNYDASIDIDLIESTQWQVLKKQISFEATF
                     EEKGKIIGSIDFDRFNDEAKFRIIEKYEDLKAKHKMLCIDFRAKLRSSGHPREVEKEF
                     LEEIHLTTACYDNILLEIEHAFQHYAEHKTLHMKTQTWTYR"
     gene            complement(12553..13512)
                     /locus_tag="R8X70_000866"
     CDS             complement(12553..13512)
                     /locus_tag="R8X70_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEF2928658.1"
                     /translation="MNKNKFDEFVAKNLPQALKKDTEQSLGDRSKYVGSSDIGGCLRK
                     AYLDKTTSYEHDLATLIRFQRGHVAEGIIEKMLDGLNPTLQKEVKLTIEGFDLKAHID
                     FCLESKNEIVVVEAKSVNTAVDKPYDSWVMQVNFQLALLATQTQKKLRAYVVAINLNT
                     GWFKSFEINHNQTFEKLAIENAQLLANSLLNKEEPAPSEQLYCSTCPHKKTCPLMMKK
                     SEGSELSGDLLEVGKKIIELNARKKELEKELEEKKALIEEYMRTCGAKKIKVDDSFFS
                     LSNDTTSTSFDTKALKDNEPELYESLFEKYQKTSQRKGYLAIK"
     gene            complement(13607..13855)
                     /locus_tag="R8X70_000867"
     CDS             complement(13607..13855)
                     /locus_tag="R8X70_000867"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928659.1"
                     /translation="MEKIIIIAKESDIRVYKNPNDAKEYLKKYFDEFSDKTYTDHDHA
                     SIDSFVDKLDTNENTIGFFVEDNYDLSPVVFTGKIHLL"
     gene            complement(13869..14495)
                     /locus_tag="R8X70_000868"
     CDS             complement(13869..14495)
                     /locus_tag="R8X70_000868"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928660.1"
                     /translation="MSSRSVTNIISVSIDENCNKNIRGSSFSSLYGQIGYNILIGIKT
                     LAEDDFWGKYPHYKDFVEEIFVNQSNLLNQVDYEGTADVVFYKKNNKIFACVRCRVED
                     NNSAFFSDQVVFDEKFIRETSFIHPISYFMDEYISREAIISIDKYIEYRYAEKPNETN
                     SLIKEIVDNFVDFYKVEPLKPNFDFSKFDETLNKIIMSKHFPKTKDEF"
     gene            complement(14510..15343)
                     /locus_tag="R8X70_000869"
     CDS             complement(14510..15343)
                     /locus_tag="R8X70_000869"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928661.1"
                     /translation="MGTRSWIAMETNSGFYVDRIYCHFDGYVKGVGYTLLQYYNDPKS
                     VKDLIKHGDIRALRQDLSQCEKLQINKSSKMLFTDFVKATEGNRTNDIEYFYLYTQNR
                     WHYCKACEGNILTQELQFNYNKEKLLEETKQYALEKFENNQAFSLDTNSAKFLNYVWE
                     LAYINKDEAYELFEKEMINLKLSSEEIEEALQSLDVEIDEDLSGEYLTRIITQEIFRL
                     YLEGERSSCLIGTFDKKIDNLVQKYFFSYTENLNFDEETTLDEFVKEKQIDLLEAYFE
                     K"
     gene            complement(15345..15560)
                     /locus_tag="R8X70_000870"
     CDS             complement(15345..15560)
                     /locus_tag="R8X70_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928662.1"
                     /translation="MNKNKEKLEKEFWDFVALITLFFICTIIFSFAKLAVLAALCWIM
                     FLLFAFIYPVKWIVQFFLSFFKKKEGR"
     gene            complement(15647..16540)
                     /locus_tag="R8X70_000871"
     CDS             complement(15647..16540)
                     /locus_tag="R8X70_000871"
                     /inference="COORDINATES: protein motif:HMM:NF015347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEF2928663.1"
                     /translation="MNLQVITKKDNKMKKYKYTPKTKEELQALVEDESIYLGDIDTSE
                     ITDMSYLFANSTRKDFSGIEKWNTSKVITMAHMFSLCRFFNQDISRWDVGEVENMSYM
                     FHGCHYFNQPLGDWDVSMVRYMNSMFSGCHAFNQDISGWNVNRVKNMEEMFYGCYNFN
                     QNISSWDVYEVESMSWMFYDCYNFNQDISKWNVFNVAYMENMFWGCKNFNQPLGRWNV
                     SNVESMAGMFWGCENFNQPLEKWNTSKVKNMSWMFKNTISFNQSLNDWNVSRVEDTDD
                     MFLNCPIDNSNKPEALQELSI"
     gene            complement(16518..17102)
                     /locus_tag="R8X70_000872"
     CDS             complement(16518..17102)
                     /locus_tag="R8X70_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928664.1"
                     /translation="MNLQRKIKTIEKEKTKLLKSHKSLLEASNEIDLYNLVIEKEFSK
                     FYKAVNSKYPCRSREWDERMDFAQDYSDILKKIANVERLQSLINKKSKENEDGYKVGD
                     FLYSSWGYEQTNIDFYQVIATTEKTIFLAEVKADVKVTGWERGLKSPCKNALKLDKAA
                     FKTLSNSPKDSRGGGYAKSLYKYKGKALEFTSDY"
     gene            complement(17239..18138)
                     /gene="bet"
                     /locus_tag="R8X70_000873"
     CDS             complement(17239..18138)
                     /gene="bet"
                     /locus_tag="R8X70_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004292518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HEF2928665.1"
                     /translation="MDTKTTKNTKITNTQNQAVSTSFTQEKIELIRKHFFPVNAKTVE
                     MEYCLNIANKYNLDPFLKQIFFVPRRSQVEVNGKKEWVDKIDPLVGRDGFLAIAHKTG
                     KFGGIRSYSEIKQFPRLNNKGKWEYIQDLVAVCEVYRTDSDKPFVVEVAYNEYVQKKA
                     SGEATSFWTTKPDTMLKKVAESQALRKAFNLSGLYSAEEMGVGMTESSDIVIDIEAEQ
                     NNTQENKKKVDFSQNFSQSNATTFSEDERQVLLSLGLEVKNEDGYYWIVGNTYGLNEK
                     IKQLGYRFHSEKKTWWKQIGNVA"
     gene            complement(18395..18535)
                     /locus_tag="R8X70_000874"
     CDS             complement(18395..18535)
                     /locus_tag="R8X70_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928666.1"
                     /translation="MESIGVGLFVNSLYGLQMGDSRAFIILIESLLILAIVALSSIFL
                     KD"
     gene            complement(18707..19165)
                     /gene="ssb"
                     /locus_tag="R8X70_000875"
     CDS             complement(18707..19165)
                     /gene="ssb"
                     /locus_tag="R8X70_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEF2928667.1"
                     /translation="MFNQITVIGNICQDIKLSYSQSGVAFLNNAIASSYKYVANDGTT
                     KEEVCYLNFSVFGRLAENMNQYLHKGSKIFLQGRMVQENYTDKEGKNRTNYKIAVETM
                     KFLDSKPTDNNQSGNPYGNVQEPAMPEANQKVQQQVPNNQPRAEGENFPF"
     gene            complement(19685..20134)
                     /locus_tag="R8X70_000876"
     CDS             complement(19685..20134)
                     /locus_tag="R8X70_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928668.1"
                     /translation="MAKNKNQNENTTQTNEKSNVTTQTNQNSERISRAEFLRRRIEGK
                     KRTIDLNSNAQVFVSDSIAGTEIFSDLRMLDAMDSTIRKLWGNGVDSKDAETWVKEIN
                     SIKESINELQNKGREILVKVGNVRHISNNVLRRTILREIQAQNVKAE"
BASE COUNT         6992 a         3597 c         2656 g         8140 t
ORIGIN      
        1 ttaattgatt tttatatcta aaatattttt tctcataaaa acatgattac tcgtttatta
       61 tagatagact tttcaagctt tctttccatt tcttttttct ttttttcaat tgcttcatca
      121 aatcctttaa gcactgaaaa tggagcaaac tgtgccgctc ttttttctaa tggcataaga
      181 ggatattttg tagatttttt gtatttaata ttaataatat catcgtggtt attaggcatt
      241 gtgtcctcct atttgcgaat taatttttaa gccattttca agactcgagg ctttaaaaat
      301 agattttttt ccatatttgt gaacaatcgt gagtctagct ttttgtaatt tctcttcttt
      361 tataaaattt ttattttcct tctgttctaa gtcagtaaaa agactgggtt ctttaatttt
      421 ttttatcgtg tcatttttta caacattatt aagagtaaga cttatttttc taattaaaaa
      481 atcagcatta actattaaat caaacaattc taaaccttta ttgcaaatag tttccaagga
      541 agagctgtgg taatccaaat tgattgttga atgtgcattt tttggaatag atcttccata
      601 agaatcttta ctcattggac ccttgtagct ttgtaccttt tctaagcttt ctttatcata
      661 ttgtacatct aaaacgattt gattgcatgt taaattttgc tcaattagct caagaaccat
      721 atgatcgata atttctttaa gtatatctct agctttttta aaactataag gcttaggcaa
      781 aaccttagcc attaccttag agatatgttt gcttttatat tctttaatag cttgcattgt
      841 acagctttca aacccccaag catgatcgat taataactta gcatttactc caaaaatttg
      901 ataaagttta tcctcgttat taagagagta tcttgctaaa tctcccatat tgttaatgcc
      961 tatgcttttt agttttgttg catatccttt gcctatacgc caaaaatcat ttatgggcgt
     1021 gtgttgcgat attttcttct ataaagcatt tcatccaaat accctatgca aagtccatct
     1081 ttattaatat tttgtttttt ggctaatata tccattgcaa tttttgctaa gtaaagattt
     1141 gttcctattc ccgcagttgc tgttatttga gttgttttta aaatttcaaa taatatgttt
     1201 tcaatgagtt tgtcagcaga tagcttataa tgtttgatat aaggaattaa atcaataaat
     1261 acttcatcaa tggagtaaat atgaatgtct tttggatcaa aatactttaa ataaatactg
     1321 tagattttag aactatagtc tatatatgtt gacatcctag gttttgcgac aatgtaatca
     1381 agctctaaat tgggattatt tattagttca agatgattgt atgattttgc actgaaatat
     1441 ttagcaattt ttaagcgctc gtaattgatt gtttttgctt tttgtattag ttcaaatagt
     1501 cttaatctgc ctgatatatt ataagatctt aatgcgggag atactgcaag acatattgtt
     1561 ttttcagttc tactttcatc cgcaactaca agattggtat ttagaggatc taattttctt
     1621 aaaatgcatt caacagaagc ataaaatgac ttaagatcta tagctgcata tttttgcgta
     1681 ttatccatat tttcacattt gtatataata attatttttt aattgtataa aaagaatttt
     1741 aatagactaa gattgttaat ttttagttct tgttttggaa ttaatcaata aaacaatcaa
     1801 gcttgtagat tttttcatct aaaaatttta tcaaaaacca tgccttgttt aaaattacat
     1861 agtattaaaa gaggctattt aatattgtgc ttatatatat ttaaatcaag cgagtaaagc
     1921 atacggaaaa gatttatatc gagtttaatt ttaaatgata aaatttaagc tgaaatgata
     1981 aagctttttt gaaaatgctg attgtaataa aaagttacat taatataggc aaatgaaatt
     2041 ttctgctatt ttttgtcaat aataattgtt gttgataaaa taaaaatctg ccttatttta
     2101 tatatggaaa aatctcaaaa tctttatcac tcatttcatt tttcgctatt taagaaaaaa
     2161 tggaactgtt ataataatga gcttgttttt tatataaatc ataaaccaaa ataccaataa
     2221 attaaaaaaa gaaagagaaa attagttgaa aaacaaatca agaattaatt tttaaaaaga
     2281 taggagaata aatgaaaaaa cttataatct taccactgct agcaactcta gccttagctg
     2341 attatacaca atacaagcca agcgaagatt ttgctaagta ttttactaag caaagttgtt
     2401 cacaagtttt agataaattc tattatctaa attgttatga ttataatcta aaaggtacaa
     2461 aagctgtagc ttatagattg gaagcggaaa atttaaaagg cgaacaaatc aaaaaacgcc
     2521 cacgctttga agatgataca aatattccta aaaaatatcg tactacatgg agtgattata
     2581 gaaacagtgg ttatgataga ggacacactc tttctaatgc ttctatgaga aaaacaactc
     2641 aagctcaaag aagcactttt ttaatgagta atattactcc acaaaatcca caaatcaatc
     2701 aaagggtttg gaacaagatt gaaaaaagag aaagacaagt agctttgaag cttggaagtt
     2761 tagaagtttt aaatttagtt aattatgaca ataatccaca aagaataaga aatcaaattg
     2821 ctattccaag ctcttatatt aaaatcttaa aaggtgagaa ttttaaagaa tgttatcaag
     2881 tgccaaacca tgaagtggaa aacgagaata taagatctta tcaggttaaa tgtcaaaatt
     2941 aaaccacctt cctcactaaa ggtggatttt aatattatat aaagtactgt caattaaaaa
     3001 ataatcctaa caatgtgtat tttaaaacac ttaaatttta tttagaaaac attattgcta
     3061 ttaaataata aagaataaaa ataaggatga tactttatat cggcttttgt aatatcagtt
     3121 gttatacttg tgaaatttta taattttgat aaaaataaaa attaatctgt tctggaggtt
     3181 ttaattctta gatatatgtt tttatccctt gacttttagt atttttttgt tataagataa
     3241 gaagaaaaaa gaaatatttt ttcaaaaaaa tagtaatatt tacaaaaata cccacaaaag
     3301 caatcttaag attcatggaa tctattggca taggattgtt tataaataca ggcgatagta
     3361 gagcttttat tattttaatt gaaagtttgc taattttaac ggtagttgca ttatcatcaa
     3421 tctttcttaa agattgaact ttttttgaaa aaaggagaaa aaatggatgg ttataatata
     3481 gctattttaa ttggtgctat cactcttatt tttggcacat tggttttagt agctcattat
     3541 atcaatgata aagacactaa cgaaagtaaa agttaaaaac cttattgtct tagaaatgat
     3601 ttaaagatag acaaaattaa atcaaaaatt gtaggctgta aaataaacat taaagcagca
     3661 agaataatta catatgttct aacttctctt ttaaagctat ctagtttgtt ttcaagctta
     3721 tcaagtttag cacctattga atattcaagc ttatcaagtt tagcacatac tgaatcttca
     3781 ggcttatcaa atctagtatt caaaagatct atagttggta atttagaaat ggcttcttta
     3841 aattctctaa aagatttgtc ttttatttct tgagaattta tttggctttc tttagcaaat
     3901 tcgttaagag ctttaatgaa attttcttca gtttgatctt taaaatagac agaaaataaa
     3961 gcttttacac cttctgaaat ataataattt ctcactatat tgccttgcat tgtatttctc
     4021 cttgattata tcatattttt tttgcatata gcatttaatt cttcaagtat ttcatctttt
     4081 tcattttcaa aatactcatt aatgctattt tttgcatatt ttgttacatt tggaagcacg
     4141 atagtttctt tctctttcaa aagtttttct attgtatctt cacctacctt cccttcaaaa
     4201 acaataggaa tttgttcact aatgtatttg attttattct ctaaattttc ttttagattc
     4261 tctttattga tttcaccttt tttaattttt gtcttcatgg cttcaattaa aaaatctttc
     4321 tgatttgaag gatttaaagc actaacagca taacttaagc tgtctaagtc aatatttgta
     4381 tcatttggaa cgaacacaaa atattcatta tcaaaatctt caaaaggcgt gctttttaag
     4441 tcttctttat aacaaagaat tcttggaata tcaaaatatc tattttcatc aagagtatca
     4501 ctaaatttat ctgcaaaatc ttgactattt ttgatttgat tttcggctaa aaagcattca
     4561 aaatcaggtg ttaaagtgat aactaaatca ccttcatcag taaatctaaa agcttttgta
     4621 aaaatttcat tgtttttcat tgttttctcc ttttttattc tattttatgt tgatgattat
     4681 tacttttatg tttttatttc tagctatctc gatcatattc tttgttcctt ttgaaactcc
     4741 attccaaaaa gccaaaacac aatcgttgct atctaacata gataacattc tttgatttct
     4801 aataggacct gcagcttttc caaaatgttg ccaatctgcc ttgacttcaa caagattaat
     4861 cttattcttt aaggcataat ttttagccat attgtcagca cctctagccc caccttcaat
     4921 gatagtatct atttgatttt gatatagaga aaatacatta tccatttctt tattgaaatg
     4981 ttctatatct gtataatctc ttccaccaca tactaatagt ttcatctaat ctcctagtct
     5041 tcgcattttt ttgctctagc aataacttcc ccatcgtgta aaatgaaaga ttgatcaatc
     5101 tcatcaatac tcacgacaac taaaccatca tgctcataag cataaatacc tctactcgcc
     5161 aactcttcaa tgcacaattt tctttgtttt tttgttgtca tctttttcct tttctaagtt
     5221 aattgcattt gcaattctgc agtaatttac gctctttatt gctacgcaat aagcttaata
     5281 ctgcccattt tatctgccaa aagtaagtca tttaaatctt ttccatctac tatatcccat
     5341 gtaagactat ggttttcaat atttaaaaga ttcaatttct cacttaaact tttttctcca
     5401 tttagccctg cttcatcctt atcaaaacaa agcataattc ttttaccttt gaacacggta
     5461 agtatttctt ctctaaaact gaaagttcct gcaaagctaa taaacaaggt ttttgaatct
     5521 tgtttgtaat agctttttgc tgatagacag tcaatatgcc cttcagtaat aacaactttt
     5581 tcgcactctt ttaatggttt attttctaaa ccaaaaggcg ttgcaaaaac aatattgccg
     5641 caggaaatat tcacttcttt agctccgtta tatgtactat caataacacg aagtgagaaa
     5701 cctacaatca tatctgtgta aagatcaaaa tttggaacaa aagcgacatt aaaagcatat
     5761 ttccaaactt gtttttctct actaaaaatt ttaaactcga ttaaatcttc cataggaaaa
     5821 tatttcttta aaagattctc aagatcctta atattgtcaa aacttaaaaa accaattttt
     5881 ttaaccaagc ttatttccct aattcctctt tttatataat aaaggttttt tgctttttgc
     5941 tcagtagata aagaaaagcg atagatagtt gtataaatta atttcaacct ttgcgctttt
     6001 gttaactttg aataactttg cacataagga agtagttttt caacttctac atattcttta
     6061 tttggatcaa aaaatacata atccttagct ttaggcttgg gcttttcaaa tgctttttta
     6121 taggttgctt gcactccatc taaaaaagga atgttgaatt gcgtatgcaa atattcgcaa
     6181 gcttccttga aattgccatt aaacataatt tttacaacat tgacaggatt tccacctact
     6241 ccacatgcaa aacaatggca agtatttgta ttttcataaa cgcctaaaga agcgttatga
     6301 tcattatttt tgtgtgcagt tatattaaag cagtgaataa tttttttatt tctatcgcta
     6361 attgcaccta aagactctag cacatccata ataggaatat tgttaagtct ttcaagatca
     6421 tatttcatta attctcctta catattagca ttagccttaa agactaatgc gaagtttagt
     6481 ttaaaagttg atttttaatt acattaagct cttcatatat tttcactgct aggattttgt
     6541 caataacttt gccttttatt tctgcaacag catattctaa aaaatcaaaa tccttatcaa
     6601 gaacttctgt aatatcctca tcatctaagt caccatcttt gtttttccaa ctttgtatgt
     6661 aaacattgac attgctatta tttagcataa ctttgcccga atacacagta ttattgtcgt
     6721 taaagaaaga atctataaaa cctatctctt tactatcgtt tgattgcctt aaactgctta
     6781 aattgagcaa aatctcattt aatagtaaat tagaagactt tttgttactt agctttttat
     6841 aagcctccat agcttcttcg aaaatcctaa actcattatc acttagtgac aataaatctt
     6901 ttaagaattc ttctctttca tcattgtttt gaagtgtttt aattgtctta atatcatcaa
     6961 aacaaatttt tgaaaaagca tcttcgtaaa aactataata ggcatccaaa tcagaacaaa
     7021 ttttaagagc taactcttta tcttgaactt cattacttgg agcgttttca atatgttttt
     7081 taacattaaa aatctcttca gtaataaaaa catcttccaa agactcaagc tcataaaaat
     7141 tatctgtatt tttaatgcaa aattttatgt atttgttaag ctctatccca agcataatac
     7201 aattcttcaa tcttttcaac aaagaatctg catcatcgca aagaaaagaa acttgatatc
     7261 tgccatcaat tcccatttcg actttattaa tgaaaagatc tctatctaca tcatcgacaa
     7321 tctcttcggg agctgagctt agcagcattg aataatggag gctataagct atatcctcta
     7381 cgctttgctc attattaggc tcattatcgc ctttaatatg atattcgaca atataacttt
     7441 taaaatcatc gatttgtttg tctgtaaagc ttagctcact tttttcattg tgcattgcac
     7501 aacaatcttg tagggcataa gctaaggcat taatctcagt ttcatttgct acattatcta
     7561 agccgtagtg tttaattaaa tcttttgata tttctataaa tttatccata ttttctcctt
     7621 taaaaatttc atcgatattg atttcatgat cttcgtaata atcatacgga aggaaatcga
     7681 ttaaaacttc taaagaggta gaatttaagc aatcgataac ctttaagtca ttaatcaaac
     7741 agtagccatt ttgaactttg aaatttaaac cactcttttt taactcacta gctaaataat
     7801 ttttttctat tgagtttgaa agatagtatt tttctctttg ttcatcccat aagaagtaga
     7861 ttgtattgtc atttaaatct tttgctttta gaacctgaaa atccatctca tgaaaaattt
     7921 caataattct ttcttcgaga gggttttttc ctatagcagg aacttcagag ttacttttaa
     7981 tgattgtaaa attacattct aattcttcta attcttcagg ggtaaattta gccattagta
     8041 atccttacag tttcaactag agccttaagc tcttctttgg ttttaggcgt gtatttgtat
     8101 tttttcattg tattttcctt ttcttccaat attccattta cttttttcct tctaaaataa
     8161 gctctaacca caccaaaggt gcagttagaa agagcattaa aaatcttaat aaactcatag
     8221 gctttaattt gccaaaacac atcataatta acatgcaaaa aaggcaaatt aaaacataaa
     8281 ccaaactaaa tatcccaaac atacatatta tgcccattac aaaactcctc tttttttaag
     8341 atcagctaat tcttcatcag aaagcaaatt ttcttgccct cttttatatg tggtaactaa
     8401 aaccgctcca aactcacctt gtctttcaag aacgacaaca atattgctat ctttatcaag
     8461 atatttttga gctgttgcaa tatgatagtc agcaccatgc tgtaaaggtg aggtgtttct
     8521 aatagctctt gaaatagcaa ctgataatgt atcattttcg acttcttcaa atctttgtga
     8581 tacacgatct gtaaaatgct ctgtcgcttt aatgcagttt tggatttgtt tcttgaaaag
     8641 atttattaaa aaatcaactt tgctcttgtc ttttttagct tctttataag ctaaagctct
     8701 tgcaagccta gctacaacaa gctcgtttgt ataagttaac atttttgcat ctcctaattg
     8761 attagccaat aagagatact aatgatccct ttagggaata aaagcatccc ctaaaggcga
     8821 gttttagtaa gcactacatt cttatatcaa catatttcaa taatgaacat tgtgttgtgt
     8881 agttgtagtg taaaaagtag aaattaagag ttgaattgtg gacttaaaaa aacattaatc
     8941 atatttcttg tgttttccat aatcctttca tcaacttcac ctattttttt aattaatcta
     9001 tcttttgaaa aagactttat ttgagagcaa tttatggctg aatctacatt taaattattg
     9061 atattatttt tatcaacttt tattagccaa attctctttt taaattcttc ttgccaagtt
     9121 gttaaaggca caacaaaaac aagtttttga ttagaattaa gaagattgtt gcttaaaatt
     9181 aatgcagggc gttttttggt gatttcctcg cctacttgtg gctcaaaatc agcaatccaa
     9241 agttcgccat atttaacaat tttagatgat accatcaccc actcctgctt ctgcaagttc
     9301 aagttgttct ttttggtact cttcatcatt ttctgcatct ttaaaaccca taattaacaa
     9361 tctttttatt ttttcaatct cttgcttttc gtacatttgc tttaatgcgt ccgttaaaat
     9421 ctgagtttta ctcattttta gatcctttac taatttatca agcattaagc ttgcctcact
     9481 gttgagagtt aaattaattc tttgcatgtg ttttccttgt gtgtaatttt atacacaaat
     9541 tataacacaa attatgtgca aaataaacta cattttatag cactcttcac aaaaaacaaa
     9601 gtagttatta ttaataccac catcgcccac atgaaaagcc gcactttctt ttctaccaca
     9661 acaatcgcag tccgctttta aatgcaaaat ttcatctgcg taagacttta gtgtttccac
     9721 attgccccaa gaatttcctt ctacatcatt gattaagcct gcaactgtta taaatatttc
     9781 tttttttctt gaaagattaa taattttttc caaaaaatct ttcttgaaaa attgtatttc
     9841 atctacaaag ataaagctat atgaatctaa acttgtgttt tcatttccaa aagtgaagtt
     9901 ttgcaaatcg ctattcttgt gttttctcgt aaagaattct cttatatcac aacttgggcg
     9961 aatgatgata acttcatctt gaaataatat attagaagcc tcttctatga ttttagcaga
    10021 ttttcctgcc ttcatagtac ctaaaatcat tttaagcata caagctccct tttaaacagg
    10081 atatcctgtt attattgtga taacaccatt gtctcgattc acagcaaaaa caatagcaga
    10141 attgctattc ataagcttgt aaattttctg aaatggattc ttcgcaattt cttgatagat
    10201 cgaagccaca aggctaagat caacttttct ttcttgtaat ctttccgcaa aatgtttgct
    10261 aggaataatt ttgaaaccac tcattgtcct ctccaatcta ttctaataaa gccaaaatct
    10321 ttgcaatatt tagctgtttt agctgttttt ataagatttg tcataaagat tagctcatcg
    10381 ctatccaatt gataattaga taatttcaag ctaaacaact gttctgtagg gatttctata
    10441 ataaaatcac ttggctcaga ataatcaatt tgtaattttt caaataaatc ttcaagcttt
    10501 tgtgtttcat tttgaaaatg ccctttacca taaactattt cgtatttctc aactatgtaa
    10561 catttaaagt tcatattaat ctcctaaaac catgatagtc taataaagcc gcttttttta
    10621 gcataaggtg ccgtttttgc aacttcaatt aagtcttcta aaaaacctct ttcttcttca
    10681 tctaaaacat attcttctaa atcaagagaa agtgtatctt gcctagaaac ttcaagatct
    10741 tcgtgtcctt cgttcatcca agcatcttca agaagaccaa ctttttccaa taagcttaat
    10801 aatttatttt cgctattatt gaaataacta ccattttcgt attcaacttc ataatgtttt
    10861 gctatatgac atctgtatcc cataattttt ccttttttga tatttaatta tttttgtata
    10921 ttgttagcaa tttaaataaa ttgcgccgtt aagcaacctt tgcagctcct atttgctcgt
    10981 gcaaaaaaga ccatagtttc caaacaagag gagaaaaagc tttgtgttta tcacactccc
    11041 aattgtgaaa tactcctaaa gaaccacaac cattaaagcg aaatctaaca ctctcgcttc
    11101 cttcatcaaa ataattacca ttagcactaa tgattactct aatacattca ccatcaaact
    11161 ttgataaatc tttggatttg tcaatacact cttttaaatg ttcataaact tcatccaaat
    11221 tactatcatc atttccaagt gcaatagttt tatctttggt aaaccaaaat ccttcttcta
    11281 attttttgga gtttttcgag ctagcaagta tatttatttt tttcattgta ttttcctttt
    11341 tattttattt tttaacaaca aaaaggatag aagtatccct agtgggataa gactatccca
    11401 acttagggct tgatttgtct tagctgttta gatatgcaac ttgatcatga aaaaaaggtt
    11461 tgctaatttc aattaatttt ccattatcta aaatgataaa gttattagtg tcaaccctaa
    11521 tgcgaatctc tcttgcatct acagctatat tttcaataca acaatctgtt actctatgtc
    11581 taatactttg gttttttatt tcgcaattat cgataatcca agtattattt gtttctcttg
    11641 agtaagagat tttagatttt gtagttttgt aaaaattttt agcaataaat gttaaagcct
    11701 cttcaaaact tgtaaaaata ccaagtctta aatgttccga aagatgatcg ttgcattttg
    11761 cctctactac atagcaatag gcaattttga agcttgtgtt tattgcgcta aatacctttt
    11821 ttttatattt catttttttc ctttgttttt atcggtaagt ccaagtttga gttttcatgt
    11881 gaagtgtttt atgttcggca taatgctgaa aggcatgctc tatttccaac aagatattgt
    11941 cgtaacaagc tgttgttaaa tgtatttctt caagaaattc cttttcaact tctcgtggat
    12001 gccctgagct tcttaattta gctctaaaat ctatacatag cattttatgc ttggctttca
    12061 aatcttcata tttttcaata atccgaaatt ttgcttcatc attaaatcta tcaaaatcaa
    12121 ttgagccaat aattttgcct ttttcctcaa aagtagcctc aaaacttatt tgttttttca
    12181 agacttgcca ttgtgtactt tcaatcaaat caatatcaat agaggcatcg taattatcct
    12241 tgcgtataaa ataagaaggc gtaatgcttt tatttgataa aaatttgaaa atttttccta
    12301 cccatatttt tttgaagcta tcatcataaa cgaaaaattc atcttcaagc atcaatggat
    12361 taaccactaa atacatagga atcttaattc tgtttaaata aaatgcttca ttttttggat
    12421 ctgataaaaa atttaataac tctctaagtg tcatctatat tcctttgctt ataatgttaa
    12481 agagcaaaaa tagctctttt tatcgagctt cttttgctag cttgtttgct aatgtcttgc
    12541 tcatgctttg ttctatttaa tagccaagta accttttctt tgagaagttt tttgatattt
    12601 ttcaaaaaga ctttcataaa gttcaggttc attatctttt aaagcctttg tgtcaaagct
    12661 cgtgcttgta gtatcatttg ataaagaaaa gaagctgtca tcgactttga ttttcttagc
    12721 accgcaagtt cgcatatact cttcaatcaa ggcttttttc tcttcaagtt ctttttcaag
    12781 ctcttttttt ctagcattta actcaattat ttttttacct acttcgagca aatcaccact
    12841 taattcacta ccttcacttt tcttcatcat taaaggacaa gtttttttat gagggcaagt
    12901 agaacaataa agttgttcgc taggagcagg ctcttctttg tttaaaagag aattggctaa
    12961 aagctgagca ttctcaattg ctaatttttc aaatgtttga ttatgattta tttcaaacga
    13021 tttaaaccaa cctgtattta agttaatagc aacaacataa gctcttaatt tcttttgtgt
    13081 ttgtgttgca agtaaggcaa gttgaaaatt aacctgcata acccaagagt cataaggttt
    13141 atcaacagct gtattaacgc ttttagcctc aacaacaaca atttcattct tgctctccaa
    13201 gcaaaaatct atatgagctt ttagatcaaa gccttctatt gttaacttaa cttctttttg
    13261 aagcgtaggg tttaatccat caagcatttt ttcgataatg ccttcagcaa catgccccct
    13321 ttgaaaacga ataagagtgg ctaaatcatg ctcgtagcta gttgttttat caaggtaagc
    13381 ctttctaaga caaccaccta tatcagatga tccaacatat ttggatctat ctcctaaact
    13441 ctgctcggta tcttttttta aagcctgtgg caagtttttc gctacaaatt catcaaattt
    13501 atttttattc attgtatttt cctttttatt ttatttttta acaacaaaaa ggatagaagt
    13561 atccctagtg ggataaaact atcccaactt agggctgtat agaaaatcag agtaagtgta
    13621 tttttcctgt aaatactaca ggagacaaat catagttatc ttcaacaaag aatccaatag
    13681 tattctcatt tgtgtcaagt ttatcaacaa aactatctat tgaagcatga tcatgatctg
    13741 tatatgtctt atctgaaaac tcatcaaaat attttttcaa atactctttt gcatcattag
    13801 gatttttata aaccctaata tctgattctt ttgcaattat gatgattttt tccatttttc
    13861 tctccttttt aaaattcatc tttagtttta ggaaaatgct tagacataat aatcttattt
    13921 agagtttcat caaatttact aaaatcgaaa tttggcttca gtggctctac tttataaaaa
    13981 tcaacaaaat tatctacaat ttcctttatt aaactattag tctcattagg tttctctgca
    14041 tatctatatt caatatattt gtctattgaa ataattgcct ccctagagat atactcatcc
    14101 ataaaataac tgataggatg aataaagctt gtttctctga taaatttttc atcaaaaaca
    14161 acttgatcag aaaaaaaagc agagttattg tcttcaactc tacatcttac acaagcaaat
    14221 atcttgttat tttttttgta aaaaacaaca tctgcagttc cttcataatc aacctgattt
    14281 agcaaattcg attgattaac aaaaatttct tcaacaaaat ctttataatg tggatacttt
    14341 ccccaaaaat catcttctgc taaagtctta atgccgatta aaatattgta accgatttgc
    14401 ccatataacg aagaaaaact gcttcctcta atatttttat tacaattttc atcaatagac
    14461 acactaataa tattagtaac tgatctgcta ctcatttttt atcctttttt tatttttcga
    14521 aataagcttc tagtaaatca atttgttttt ctttgacaaa ttcatctaaa gtagtttctt
    14581 catcaaagtt aagattttca gtgtagctaa agaagtattt ttgaacaaga ttatcgattt
    14641 ttttatcgaa agttcctatt aaacaactgc ttctttctcc ctctaagtat aatctaaaaa
    14701 tttcttgcgt aatgattctt gttaaatact caccactcaa atcttcatca atttctacat
    14761 caaggctttg taaagcttct tctatttctt cactgcttag cttcaaattg atcatttctt
    14821 tttcaaataa ttcataagct tcatccttat ttatataggc taactcccaa acatagttta
    14881 gaaatttagc cgaatttgta tccaaggaaa atgcctgatt attttcaaat ttctcaagtg
    14941 catattgctt tgtttcttct aaaagctttt ctttattgta attgaattga agctcttgtg
    15001 ttagaatatt tccctcgcaa gctttgcagt aatgccaacg attttgcgtg taaagataga
    15061 aatactctat atcatttgtc ctattaccct ctgtagcttt tacaaaatct gtaaaaagca
    15121 ttttactgct tttattgatt tgtagttttt cacattgact taaatcttgt cttaaagctc
    15181 taatatcacc atgttttatt aaatctttaa cagatttagg atcattataa tattgtaaaa
    15241 gagtataacc tacaccctta acatagccat caaaatgaca ataaatacga tccacataaa
    15301 agccactatt tgtttccatt gcaatccaag atcttgtacc cattttatct cccctccttt
    15361 tttttaaaaa aagacagaaa gaattgcact atccatttga caggataaat gaatgcaaaa
    15421 agtagaaaca ttatccaaca taaagctgct aacactgcta atttagcaaa agaaaatatg
    15481 atagtgcata taaaaaatag cgtaattaga gccacaaaat cccaaaattc cttttctaat
    15541 ttttctttat ttttattcat tatttttcct ttttattttt taacaataaa aaggatagaa
    15601 gtatccctag tgggataaaa ctatcccacc ttagggcttg atttgtttaa atagataatt
    15661 cttgtaaagc ttcaggcttg tttgaattgt ctataggaca atttaaaaac atatcatcag
    15721 tgtcctcaac cctactcaca ttccaatcat ttaatgattg gttgaaggat atggtatttt
    15781 taaacatcca tgacatattc ttaaccttag aagtattcca cttctctaag ggttgattga
    15841 agttctcaca accccaaaac attcctgcca tactctccac attgctgaca ttccacctgc
    15901 ctaaaggttg attgaagttc ttgcaacccc aaaacatgtt ttccatataa gctacattaa
    15961 aaacattcca tttagagata tcttggttga agttatagca atcataaaac atccatgaca
    16021 tactttcaac ttcataaaca tcccaacttg aaatgttttg gttgaagtta tagcagccat
    16081 agaacatttc ttccatattt tttaccctat tcacattcca acctgaaata tcttgattga
    16141 aagcatggca gcctgaaaac atagaattca tatacctaac catactcaca tcccaatcac
    16201 ctaaaggctg attgaagtaa tggcaaccat gaaacatgta agacatattt tcaacctcac
    16261 ccacatccca tcttgagata tcttgattaa agaatctaca taacgagaac atgtgagcca
    16321 tagttataac cttacttgta ttccactttt caatacctga aaagtcttta cgagtagagt
    16381 ttgcaaataa ataactcata tcagtgatct cacttgtatc aatatcacct aaataaatac
    16441 tttcatcttc aactagagct tgaagttctt cttttgtttt aggagtgtat ttgtattttt
    16501 tcattttatt atccttttta gtaatcactt gtaaattcaa gagccttgcc tttatattta
    16561 taaagacttt tagcataacc accacctctt gaatcttttg gagaatttga aagcgtctta
    16621 aaagctgcct tgtcaagctt taaagcattt ttgcatggac tttttagacc tctttcccaa
    16681 cctgttactt tcacatctgc ctttacttct gcaagaaaaa tggttttttc ggttgtggct
    16741 ataacttgat aaaaatcaat gtttgtttgt tcgtatcccc aacttgaata gagaaaatcc
    16801 cctactttat aaccatcctc gttctcttta ctttttttat tgataagaga ttgaagtctt
    16861 tcaacatttg cgattttttt taaaatatca ctgtagtctt gagcaaaatc cattctttca
    16921 tcccactctc tacttctgca aggatattta ctatttacag ctttgtaaaa ttttgaaaat
    16981 tccttttcga tcacgagatt gtaaagatca atttcattag aagcttcaag caaactttta
    17041 tgtgatttaa gaagtttagt tttttctttt tctattgttt ttatttttct ttgtaaattc
    17101 attgtatttt tccttttttt gatttgataa ttaaaaaaag gaatagaata ttccctaaaa
    17161 gcgggaatgt ctattcccac cataggaatc aatttaaatt aagttagcac tagataattc
    17221 tagcgcgaga ttaccgaatt aagctacatt tccaatttgc ttccaccatg tttttttctc
    17281 agagtgaaat ctataaccta attgcttgat tttttcattt aaaccatagg tatttcctac
    17341 aatccaataa taaccatctt catttttcac ttcgagtccc aaagataaca aaacttgtct
    17401 ttcatcttcg ctaaaagttg tagcgtttga ttgtgaaaag ttttgtgaga aatcaacttt
    17461 ctttttgttt tcctgagtat tgttttgttc ggcttcaata tcgataacaa tatcgctact
    17521 ttcagtcatt ccaacgccca tttcttcagc agaatataat ccactaagat tgaaagcttt
    17581 tctaagtgct tgcgactcgg ctactttttt caacatggta tcaggttttg tagtccaaaa
    17641 tgaagtagct tcgcctgatg ctttcttttg cacatattcg ttataagcaa cttctacgac
    17701 aaaaggtttg tcactatcag tgcgatagac ttcacaaaca gcaactaaat cttgaatgta
    17761 ttcccatttt cctttattat ttaatcgtgg aaattgttta atttcactat aagagcgaat
    17821 tccgccaaat tttcctgttt tatgggcaat agctaaaaaa ccatctcttc ccactaaagg
    17881 atcaatttta tccacccact cttttttacc attaacttca acctgcgatc ttcttggcac
    17941 aaaaaatatc tgtttcaaaa acggatctaa attatactta ttagcaatat ttagacaata
    18001 ttccatttca acagttttag cgttgacagg aaagaaatgt tttcgaatta attcaatttt
    18061 ttcttgtgtg aaagaagtac taacagcttg attttgagtg tttgtaattt ttgtattctt
    18121 tgtggttttt gtatccattg ttatttcctt ttttgtattt ttaaataaaa aaggaataga
    18181 aatttatatt gcccaagaag ggaataaaaa aatctattcc caacttatag ggcgtgttaa
    18241 gctaaaagct aaagattagc ttttactttc gttagtgtgt ttgtcgttaa aatagtgagc
    18301 tactaaagcc aatgtaccaa aaataagagt gatagcaccg attaaaatag ctatatcata
    18361 accatccatt ctctctcctt ttttcaaaaa aagatcagtc cttaagaaag atcgatgata
    18421 gcgcaactat cgccaaaatt agcaaacttt cgatgaggat aataaaagct ctactatcgc
    18481 ccatttgcaa accataaaga ctatttacaa ataatcctac gccaatagat tccatgaatc
    18541 ttaaaattgc ttttgtggat atttttgtaa atatcgatag ttttttgaaa aaatctttca
    18601 tatttcttct ccttatctta taacaaaaaa cgctaaaagt caaggggtat aatatcccgt
    18661 gttgggataa aaatacccca acagcgggct tgttaattat ttagaattag aaaggaaaat
    18721 tctcaccttc tgctctaggc tgattattag gtacttgttg ttgcaccttc tgattagctt
    18781 caggcatagc aggctcttga acattaccat aaggatttcc tgattgatta ttatcagtag
    18841 gtttgctatc taaaaacttc atagtttcaa cagcaatctt atagtttgtt ctattttttc
    18901 cttctttatc tgtataattt tcttgaacca ttcttccttg caaaaagatt tttgagcctt
    18961 tgtgcaagta ttgattcatg ttttcggcta atctgccaaa aacactgaag tttaagtagc
    19021 aaacttcttc ttttgttgtg ccatcattag caacatattt atagctacta gcaatagcat
    19081 tatttaaaaa agctacacca ctttgagaat agctcaactt aatatcttgg caaatattac
    19141 ctataactgt aatttgattg aacatgtgtt ctcctttaaa aaattttatt taagacattt
    19201 gtcttataaa aacaaaagag aacacgccct aaatagggat attctttttg cttttataaa
    19261 acaagaaaga aatccctaaa aaagggatta aattatgctc taaaagagcg atgtattcat
    19321 caagtaaatc tgtcatcata ataaatactt tgtgtataac ttcaagaata agaaattctt
    19381 aaataaaaac acaaagaata tgcttcacca aaagatgaga taaaatttgc gttcttattt
    19441 aagaacattt atccatctaa tggattccta ttcgtttaaa ttaataccca tgtataaact
    19501 tactttgcgt tctacgcaaa tcgcaacttt gcgtacgcca aaataaacat taaaaggacc
    19561 aaaatgctta tttggcagct ttagctcacg ctaaagaacg gactatatct tgactgtagt
    19621 aaaacagtcc cctccgtttg ggttatcttg tataaaaaaa tcctttttta ccccatttca
    19681 aaaactactc agctttaaca ttctgtgctt gaatttctct aagaattgtt cttcttaaaa
    19741 cattattgga gatatgtctt acattcccaa cttttactaa aatttctcta cctttatttt
    19801 gtaattcatt gatgctttct ttaattgaat tgatttcttt tacccatgtt tctgcatctt
    19861 tagaatcaac tccgtttccc cataattttc ttatggttga gtccattgca tctaacattc
    19921 tcaaatcaga aaaaatttca gtacctgcta tggaatcact aacaaatact tgagcgtttg
    19981 aatttaaatc gatagttctt tttttgcctt cgattcttct tcttaaaaac tctgccctag
    20041 atattctctc tgaattttga tttgtttgag ttgtaacatt tgatttttca tttgtttgag
    20101 ttgtattttc attttgattt ttattttttg ccatagaatt tccttgttta tttaaatact
    20161 ttgaaagttt aaaatgaatg aaatggggtt attaaaaaag atttgaatat atcgcttata
    20221 acctactcta cttggttctc tcatctaaaa aagatgatac cctttcgata gtctctgaac
    20281 tttattcata tttaaaacaa atttgaattt gcagaattta ctcgtgagtt tggtattgtt
    20341 ttaacttaaa aggatactaa aagtatcctt tgtttcaatt tttttaaaaa tttgggctag
    20401 taccctttaa agttaaaagc aatactttag caaactctac aaattcaaat tatattttaa
    20461 acttagaatc ttagctgctg actgactcat gaattgatat tttttaccta tccaattagg
    20521 aaacaatagt atttctacta aagcttggta tatcaaccct atctaagact atatcttagc
    20581 gtaattgcga gcagacttac gaatctgtct gatctccaca tcgtaatgtt cttgaccagc
    20641 tcttcccagc aattagaagg gaattaatcg gctaagagct aaccgaattt caatatcaca
    20701 acctgtttct atgtgactcg ctcatcacaa agctatataa ggcaggaggt gtggacctgt
    20761 cattccttat tgctattccg aacttaataa aaagttaatg agcaaattat attttgtttt
    20821 tttaaaaaag tcaatagttt ttattatttt tttaaaaaaa ccatataaat acctattttt
    20881 ccatattttt atcacaagtg gaactgttat aataatccaa aatctctatt tttccatact
    20941 attaaatttt agttaagttt tttagtttaa ttcacaccct tctaatgcct attttttcgt
    21001 aagtggaact gttataataa taattttacc cctattctcc ataatcttaa gttatttata
    21061 agcaaaaaaa ctctcttttt tgaaaaaatg cggaactgta ataataaaat gcggaactgt
    21121 aataataatt aaaaaagtta atttttaaag ctcaaatatc tattagttag tatttagaaa
    21181 tagttttgga aaaaaactat tattatttat caaaaaataa cctagactaa atcactttat
    21241 actagttatt ttaaaattat tttaattaaa aaaaacggaa ctgtaataat aaaaaacgga
    21301 actgtaataa taacctcctt taagaattta ttttaagaga ttagtttatt aaaaaaagag
    21361 aattaaattt atatattaga ttaat
//
LOCUS       DAQUWA010000027        21247 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.027, whole genome shotgun sequence.
ACCESSION   DAQUWA010000027 DAQUWA010000000
VERSION     DAQUWA010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21247
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.027"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            100..735
                     /locus_tag="R8X70_000877"
     CDS             100..735
                     /locus_tag="R8X70_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004288266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEF2928669.1"
                     /translation="MDHHKLIPLWDERYNINHQKIDTQHQRLFEPAAQVENAVFKFVK
                     RDELKEILTELFAYMKEHFHDEEEFMQEIQYPRLYEHKQIHKNIIHEMFQLIQNIKST
                     NDLKEKLYSIMSKWLSRHILSHDVMIIAWVNENLKKDENKALELNDLPPKQTLTQEEN
                     FEFIYSCPCKIDHRLSFKEHESITNEGKVMRCKKCQELLFFIRSQEKTYKG"
     gene            739..1334
                     /locus_tag="R8X70_000878"
                     /pseudo
     CDS             739..1334
                     /locus_tag="R8X70_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862264.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
     gene            1387..2145
                     /locus_tag="R8X70_000879"
     CDS             1387..2145
                     /locus_tag="R8X70_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928670.1"
                     /translation="MLAFFKGLGIGFLCLVLFVAGVIFNVEFLNKNKTTQTLNFSRSI
                     ETSMEAKPDIFHANINFWANENLSTQTFLSNEDKIQISNTFNQILERSKKENFCSGGS
                     FSLEPNFSYKDGVQTPKGQRLHANLECEFTADKLENFNKLLNDLNSIIAKSEFIGIST
                     PALEPKFSKQTLKDNKEKLYSELLKKAYSYEKIYSLDLNKTCILKNLNIESIPNFYPR
                     ALNSMKSADNMELSLPIVKDEEQSISGTALIICK"
     gene            2205..2279
                     /locus_tag="R8X70_000880"
     tRNA            2205..2279
                     /locus_tag="R8X70_000880"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2237..2239,aa:Gly,seq:gcc)
     gene            2289..2377
                     /locus_tag="R8X70_000881"
     tRNA            2289..2377
                     /locus_tag="R8X70_000881"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2323..2325,aa:Leu,seq:taa)
     gene            2398..2471
                     /locus_tag="R8X70_000882"
     tRNA            2398..2471
                     /locus_tag="R8X70_000882"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2430..2432,aa:Cys,seq:gca)
     gene            2503..2590
                     /locus_tag="R8X70_000883"
     tRNA            2503..2590
                     /locus_tag="R8X70_000883"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2537..2539,aa:Ser,seq:tga)
     gene            2666..2995
                     /locus_tag="R8X70_000884"
     CDS             2666..2995
                     /locus_tag="R8X70_000884"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928671.1"
                     /translation="MKKFILISSILSSFFIFAEANELPSDKIQPEVKVIKEHFKNKVE
                     KIKFEAWAKGMGLNFSTQKYLNNQNYKKYAKTMAKLIRKTRGVKGKVEICYEGTPQKR
                     VHKCNKF"
     gene            4473..4826
                     /locus_tag="R8X70_000885"
     CDS             4473..4826
                     /locus_tag="R8X70_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928672.1"
                     /translation="MDSTPESRWEFDQEIDAYKEGSVRSYSYDLPNHWSEADVEIYLE
                     KLYLHAKLAALTPPQGYPNTPRYYSPERLEFIYNKHKLDSKLDPRIPAIYRANFPEEL
                     RAKIRAFAKEYNIKE"
     gene            4828..5808
                     /gene="ribD"
                     /locus_tag="R8X70_000886"
     CDS             4828..5808
                     /gene="ribD"
                     /locus_tag="R8X70_000886"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEF2928673.1"
                     /translation="MKNFYMNLALNEAWKYQFLTYPNPAVGCVILDKNEKILAIKAHE
                     KAGCAHAELNAIAHAFTNLNPEISLPQEANAMHEFICKNHRGIFKDSIAFVTLEPCSH
                     QGKTPPCAKLFSELGFKKIFISVKDENKIASGGAEFLKKQGIEVEFDILKEEGKKLLK
                     PFLKWQKGQFKLFKLALSMNGSPFGKIVSNELSRTYAHKIRSVIDLLVLGGETIRKDR
                     PILDARLCKSKAPNLCILSHQNLENFDKSIPLFSVPHRQIYTQIPNKAKFLMYEGGEN
                     FLKKFKDEMDMFLIFQSSSLNDEKNVTMPLNFKPLYRNFLGSDTYGIYEL"
     gene            5789..6310
                     /locus_tag="R8X70_000887"
     CDS             5789..6310
                     /locus_tag="R8X70_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928674.1"
                     /translation="MAFMSFSGFFYARNDLRLFKIEKKSEIKSFFYKDYTLASFKDEL
                     NLNNEIFFYQSLKENLFKENDEILISNLGKKIILFRNFTQNSDNFAEAKLKQVLLLIF
                     LFLASVFFASLAAINEFGAVDLVFLMICLLLLVMGIINLGLLFKQIRILKSFSKEEMK
                     EFLTQRMKKYAKK"
     gene            complement(6370..7734)
                     /locus_tag="R8X70_000888"
     CDS             complement(6370..7734)
                     /locus_tag="R8X70_000888"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEF2928675.1"
                     /translation="MSNLNIFKIGVGPSSSHTLGPMLAGNLFCKKIAKKLEKIERIQI
                     ILYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLS
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGGLVDEETYYSVGGGFVLTAAQLEKKGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEIRAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKERVAMTTDPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKAIEFLLVAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGANAFKACNAAEMAMEHHLGLTCDPVGGLVQIPCI
                     ERNAFGAIKAISAARMAMTRKSIPIVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(7745..9067)
                     /locus_tag="R8X70_000889"
     CDS             complement(7745..9067)
                     /locus_tag="R8X70_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HEF2928676.1"
                     /translation="MNTPKWTRYDTRWVLSLFGTAVGAGILFLPIKAGVGGFWPVVVM
                     ALIIFPMVYLSHRALSRFVSQANGNDKDITHAAEEYFGRKVSIFISVLYFFAIFPICL
                     AYCVGITNTFESFIYHQFLPLLNSEGVFADIIRAMYEVSTDDKEKVVASLFPFYRLLL
                     AFILVSVFMLIMLFSEELITKVCEWLVYPLCAILFLFSLYLIPQWSFESFSAIPGTKE
                     FITIVWLTLPVLVFSFNHSPAISTFSLSVKREYPENSVQKANQILFRTSVMLLAFVMF
                     FVVSCVLSLTPAELAEARAQNIPVLSYFANKLDNPFISYGGPLIAFLAISSSFFGHYF
                     GAREGAYGIVRKCCKLAGNENPDLKKIAVYSTLVMYIVMLITAYINPSILGFIESLGG
                     PIIAAILFLMPIIAIYTVSKMKKFQNKALDAFVFITGVLTIITVIYTF"
     gene            complement(9337..9753)
                     /locus_tag="R8X70_000890"
     CDS             complement(9337..9753)
                     /locus_tag="R8X70_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002833266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HEF2928677.1"
                     /translation="MKLKLGLAALLGATVLFARDIIVPASELPRNAQDFISKNFKTAQ
                     IALVKKDIDSYDVTLNDGTEIDFIITGEWKDVDGKYKALPNSILPNIMPKISASSNAQ
                     IIEVSREINGYKFELSNQLKIYTDAQGNILGQKFDY"
     gene            complement(9822..10559)
                     /locus_tag="R8X70_000891"
     CDS             complement(9822..10559)
                     /locus_tag="R8X70_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HEF2928678.1"
                     /translation="MQENHNFISFVLLDEAKFDFLKLKKILEDDFDIWIADENFTQDG
                     VIFSFKNMIVTLNLIKNPIPNNEAEYYANFNFVWKDALEQTQKHKAHLLVSVLSQSES
                     KLDQAKLFTQISSACLQDEHTLGFYTGGVVLEPKFYIENAKMLKENRLPIYNWIYVSV
                     YPGDNGNNAYTYGLRNFDKLELEVCDANIEEKELFFTLYDIILHILTYDLSLKDGDTL
                     KFEDGRILSFKKSQGIGVENESLKIIF"
     gene            10726..11151
                     /gene="exbB"
                     /locus_tag="R8X70_000892"
     CDS             10726..11151
                     /gene="exbB"
                     /locus_tag="R8X70_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEF2928679.1"
                     /translation="MEFLKDYIDLIIFIILGVMAFIAFWCVIERVLFFRKIDFKNYEN
                     QEQFDDAISENLTTIYIIYSNAPYIGLLGTVVGIMITFYEMGIAGNIDVKSIVVGLSL
                     ALKATALGLLVAIPALMAYNALLRKVSLLSNAYKVSKNA"
     gene            11144..11533
                     /gene="exbD"
                     /locus_tag="R8X70_000893"
     CDS             11144..11533
                     /gene="exbD"
                     /locus_tag="R8X70_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HEF2928680.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIILSISTFIAHGKIEINLPV
                     SENALSLNNDEKKLSISIDENNIFYLDDKTTDLKGLSDAISSLHKKTIVELKSDKNAK
                     FESFVQIIDLLKAKEHENFQITTEKNR"
     gene            complement(11768..12658)
                     /locus_tag="R8X70_000894"
     CDS             complement(11768..12658)
                     /locus_tag="R8X70_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928681.1"
                     /translation="MDKLTINDFNVSLPSSQNVTNRKEILELKKEEKDKIPVQDLSSL
                     NSDGVKVVFENKQGELIALNLSDENYSSLQKNFGSYTNYVARNDGSIRLNGEANEFIA
                     NWFENIEDNFNSLSSNLSSNTQDKNIKLNFHTNTITQSMQNLGFKSNDEKIPNDASME
                     KKLNFFIDKDRDKNGKIDDNDVKEPSMGEILNDISKISGRANAMQTIDPQKIYKKDDS
                     GVTIKEKDEKDDKDLLEIAKEKGLSALSADEQAKLKASNPQIFEELQNKSLGNLEQNL
                     KKDLMVQISNNEAIFVNKRV"
     gene            complement(12712..12909)
                     /locus_tag="R8X70_000895"
     CDS             complement(12712..12909)
                     /locus_tag="R8X70_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928682.1"
                     /translation="MRKLLSVALVACFIGSFAYGKTENNKSPQVRSSCVDYEIRLKRC
                     NSLPTQYQRQMCRLGLFAACK"
     gene            13030..14013
                     /locus_tag="R8X70_000896"
     CDS             13030..14013
                     /locus_tag="R8X70_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnmA/TRMU family protein"
                     /protein_id="HEF2928683.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSDKSE
                     IMKKRAAMVGADFEMIDVRNSYLQEVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGISGRSRKRQLELASQFGLEDFESPGGGCLLTLDSFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENELLRNLKTPKYEVIELGDLIGAYSLLSAN
                     ADEKDLELALKIALTYTKHEANKSYELRFKDKSYKSIAFEDKKEINPFFIS"
     gene            complement(14016..15359)
                     /locus_tag="R8X70_000897"
     CDS             complement(14016..15359)
                     /locus_tag="R8X70_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEF2928684.1"
                     /translation="MIKELTNFIVANGYSTSSVTIDELDQERDILFLDLKYGFVGEVY
                     LNGDNNTTRLDFGMPLKKGDKFNIYDLDTGIENLNNGARDVKIAVKASENYGYSDIFI
                     NLKSKPPDLILDFDNSGYKAKGEYKASAYLSLSNILNLNDSIRFGFIKGLLKDMSQER
                     ENVYVANYTLPIQSYQLSYSMQYSDNINMIEGYDNSFIKNTDTSLRHKIMLKKILHRT
                     SKDKFSIYANLGIKDDVNEIDNFRLESSSGRYSSIASGVEYSTLAFGGFLFLNLEYEK
                     GIPFLGSKKDSKDSLYKIEFNKVNFNLSYQKSFYANDGLAFLYQNSLGASYSNEPLLY
                     ADKFLIGDEYTVRGFKESSAALDYGAYSNNTIYLQFLNAPKYLRALEPFVGLDMGYGR
                     DYLLPNKDFLAGVAFGFRYNLNHLSLNLTASKALHKSSNMPSETIPIYLRASVFF"
     gene            complement(15380..15667)
                     /locus_tag="R8X70_000898"
     CDS             complement(15380..15667)
                     /locus_tag="R8X70_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928685.1"
                     /translation="MKFLKIIFLLMSFICLLQADDSAKTLNLLDKRQQQLHIQKEFDE
                     LEKKQQQEKDVYLENQDSEDKIYIFKQIQFKKNDTLTMQANNILKNTLISL"
     gene            complement(15857..18574)
                     /locus_tag="R8X70_000899"
     CDS             complement(15857..18574)
                     /locus_tag="R8X70_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HEF2928686.1"
                     /translation="MYANALQSNTKLSEEEIKKLLENGAKYANENGLNLGQGLAKNQA
                     VDQDMILYVTIKQNGKNIMAPMLYLSKETIGNNEIKSNLTGKTGVDINTQSFNSLLGG
                     IASEGQININAGNEINLQSSNLNAQNINLSANNVNIDTVLGIDEKGSYNSIKKGEIKA
                     NNVVNIDSVNDLNIKNSDISTSANDSKIVLISQKGDVNIKNDYSKSSSFEQINTDSQK
                     SNTTTSIDGVLSTNIKGANVGIVSNQDVNIIASNINANNANIKDAHELSKTKTDGVYL
                     KPVEISYESANLETSKSISSTLNSKGDININTNGNIAITGSTLQADKSANLNGENKIS
                     SSSHSSTSSIAGYKQSSVNTDTSLVSSSQIQSDILNLNAQKNVSIKGSELNGGEIDIK
                     ADKVYFIAAQNKTHTESDSIAIGVFANANLELTGNGVAVNYSFVQDKANANTTNSSNS
                     ITQGGVRSDLLGTAEAGLEFSKTEKISDELSHVSNTIKGSNININANNALDIGGANFE
                     ANKDINLRAGEIVSTKYEDTKTQSSTGFGLYIKERIEATSPIASAINQSAQNAAAKNE
                     NLGVNYGIVASQALANTANIFSNNLINTTSNQTLGFKFNQDKSQSSSENISKINAGDN
                     LNLESTKGSIVLNGVEAKANSINIEAKDNVILNAAKSKNSSSSSSLEIAATNKQTAGY
                     HAVDGGTVGEGIEGFASASYSKSNETQFTNANLNANNININTGKDFTLNGANVKASND
                     AILNVGGNLEVNSLADSLNSQKYSALLNASGTGGLSSNHLVTGSVSGTLGIGYAKTDK
                     TTVTTQSGISAGNEINGHVNGNLNLQGGILNSDNQKGNLLVDGKVTNSEVSVYEKSDV
                     ATIRLSGGTNQSFGGVVDIDDHIDKTGSVNSAANININNNKNHGISTDT"
     gene            complement(18538..19140)
                     /locus_tag="R8X70_000900"
     CDS             complement(18538..19140)
                     /locus_tag="R8X70_000900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928687.1"
                     /translation="MLDALKYFSTTQAKNHQRESAWNALKDAAAKNSALNQYFSLLFG
                     SDYASKRFVPDQKEWNLDAKIVFKAKSEAVIASKGKLDLNAKEYNQDLVSSLDKNFAL
                     LDSDLKKATNSQDLILNSIPDLINSGLFTLENKTNDNITYEYTTNTSIIDESKYFGFL
                     SILNQFKNKNFNEFIVIGDPFLKISLLTQCMQTHYNPILN"
     gene            complement(19275..20693)
                     /locus_tag="R8X70_000901"
     CDS             complement(19275..20693)
                     /locus_tag="R8X70_000901"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928688.1"
                     /translation="MVDRDYFNVISRGIDLAGSIAHYQSGKNLSDINFIAGLNKVDLS
                     TPNAPKIIASKQKDEKIDYGIDGKYLGSMYANTVTLISTEEGVGVRHSGVIRGIEDVI
                     VKVKDKAEFQAIGVNTNGSVKIDAKDIKTSLINADTIDLKASGKVTNEGLYKGKQIQI
                     NANNFENAKQTNLSQETKDIFKINQENSSIFADSLTLNTLDKTSNFGFINALNDIKVG
                     TNSFDNQGEISANKDISLMLNDDAFINNGKILSQNDIQIQANKDLTLNHGNLYAQNLL
                     HIKSLNDLNINSKLENTSSIELDAKNIYVKNLVASGKELNLHADENLVNDAYLFSNGD
                     LRAQATTLTNNSTFNSLNNLYLNAHTIHNNALIFADKDINIEANILNNNANLTGMLET
                     STEYSQGFGQVGYGDTAFKRWNMEVGVTGIVKYNNLLDSKQASIQAGKDININTQSQD
                     NARQINNSGKILLKAISYLLEI"
     gene            complement(20693..21241)
                     /locus_tag="R8X70_000902"
     CDS             complement(20693..21241)
                     /locus_tag="R8X70_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEF2928689.1"
                     /translation="MEFSKKKIVRLSLNLTLLGALFPCVLFSADLRQRNGNVIVSRTT
                     DLTQSSNKTDVINIKNPNQNGVSHNQFDEFSVQDGVIFNNSLKDGNSQIGGWVGKNPN
                     LKQNANTIINEISSKQASNINGAVEVFGKSANLIFANENGFSVNGAAFLNTKGVTLST
                     GKFNGDFTEVTSNGRVAIGEKG"
BASE COUNT         7393 a         3441 c         3031 g         7382 t
ORIGIN      
        1 gaataaaata tttaaaatac atttttaatt ttcaaaatta tattctttgt tataattatt
       61 taaatcagta tttttaaacg catttaaagg gttaaatcaa tggatcatca taagctaatt
      121 cccctttggg atgaacgcta taatatcaac catcaaaaaa tcgataccca acaccaaaga
      181 ctcttcgaac ctgcagcaca agttgaaaat gcggttttta aatttgttaa gcgcgatgaa
      241 ttaaaagaaa ttttaaccga actctttgct tatatgaaag aacattttca tgatgaggaa
      301 gaatttatgc aagaaattca atatccacgc ctttacgagc acaaacaaat acataaaaat
      361 atcatacatg aaatgtttca attgatacaa aatataaaat ctacaaatga tttaaaagaa
      421 aaactatact ctatcatgtc aaaatggctt tctaggcata ttttaagcca tgatgttatg
      481 attattgctt gggtaaatga gaatttaaaa aaagatgaaa ataaagcact tgagttaaac
      541 gatttgccac caaaacaaac cctaacacag gaggaaaatt tcgaatttat ctattcttgt
      601 ccttgcaaga tagatcatag gttaagcttt aaagagcatg aaagtattac caatgaaggc
      661 aaggttatga gatgtaaaaa atgtcaagag cttttatttt ttattagaag ccaagaaaaa
      721 acttataagg gataaagctt gcttccaaaa tgggataaaa tctatagcgt tcataatggc
      781 agaatagaca accaacacaa aaagctgttt gaacttgcag ccaaagttga acatatattt
      841 gataaacccg ttcatagaga tgaaattaaa gctttgctta cagatttttt caactatatg
      901 aaataccatt ttgatgatga agaaaaatat atgcaattca ttcgttatcc agactttgaa
      961 aggcatcgcc aaattcataa agaaatcatc caatccatga taaaaatcat tcaaaacata
     1021 aaaaccacca acgacctaaa agaaaaactt tatatcatgg taaaaaatgg cttttagaac
     1081 acatacttta tgaagatatg agagtagaac aatggagatt aggttcttta agccctgaaa
     1141 atggagctga tatcactttt gaagaaatta aagatgatga agatgaggct gtaatttatt
     1201 tttacgcttg cgagtgcata gggcaaattc atgatgtacc ttctggaatt cataaaaaaa
     1261 tacaaaatga aggtgcaaaa tttaaatgta aaaaatgtaa atttccttta gaatttttca
     1321 aaaaagggta ttaattttta tatttatttt gttaaaatta tttaattttt attaaaggat
     1381 gaagaaatgt tagcattttt taaaggttta gggataggat ttttatgttt ggtacttttt
     1441 gtagctggag tgatttttaa tgtagagttt ttaaataaaa acaaaactac tcaaacttta
     1501 aatttctcaa gaagtataga aacaagtatg gaagctaaac ccgatatttt tcatgcaaat
     1561 atcaactttt gggcaaatga aaatttaagc actcaaacct ttttaagcaa tgaagataaa
     1621 attcaaattt ctaacacttt taatcaaatt ttagaacgct ctaaaaaaga aaatttttgc
     1681 agtggcggaa gtttttcact tgaacctaat ttttcttata aagatggagt tcaaacccct
     1741 aaaggacaaa gacttcatgc aaatttagaa tgtgagttta cagcagataa actagaaaat
     1801 tttaacaaac ttttaaatga tttaaactcc atcattgcaa aaagtgaatt tataggtatt
     1861 tctacacctg ccttagagcc taaattctcc aaacaaaccc taaaagacaa taaagaaaaa
     1921 ctttatagcg aacttctaaa aaaagcttat tcttatgaaa aaatttattc tttagatctt
     1981 aacaaaactt gtatattaaa aaatctaaat attgaatcaa ttccaaattt ttatccaagg
     2041 gctttaaata gtatgaaaag tgctgataat atggagcttt cattgcctat agtaaaggat
     2101 gaagaacaaa gcattagcgg tactgctttg attatttgca aataatcaaa gcaaaataaa
     2161 ctcattttaa gtttattttg ctagaatttc atctttagct ttacgcggga atagctcagg
     2221 ggtagagcac aaccttgcca aggttggggt cgcgagttcg aatctcgttt cccgctccat
     2281 tatcacccgc ccgggtggtg gaattggtag acacaaggga cttaaaatcc ctcggaattt
     2341 ttcttccgtg ccggttcaag tccggcctcg ggcaccactt tttctaaaaa ttatcagggc
     2401 gacatagcca agcggtaagg catgggcctg caaagccttg atctccggtt cgaatccgga
     2461 tgtcgcctcc aaaaaaggca attaattttt acaacttcaa ttcgggagat ggctgagtgg
     2521 tcgaaagcgg cggtcttgaa aaccgttgag ggttacacct ccaggggttc gaatcccttt
     2581 ctcccggcca ctttgaaatt ttcattagtt taacaaactc tgttatgata aattgatttg
     2641 atctaaaaaa taaggaaatc aatttatgaa aaaattcatc ttaatctcat ctatactttc
     2701 atcttttttt atatttgccg aggcaaatga actgccaagt gataaaatcc aacccgaagt
     2761 aaaagttatc aaagaacatt ttaaaaacaa agtagaaaag ataaaatttg aagcatgggc
     2821 aaaaggcatg ggtttaaatt tctcaactca aaaatatctt aacaatcaaa actataaaaa
     2881 atatgctaaa accatggcaa aactcattag aaaaacaaga ggagttaaag gcaaggttga
     2941 aatttgttat gaaggaacac ctcaaaaacg agttcacaaa tgcaataaat tttaattcct
     3001 gacttaaatt aatatcatat aaaattttta agtttttttc actataaaaa agctacaatt
     3061 tcttaattat atatcattaa ggaaaaggca tgtttaaaat tattttactc atatcaataa
     3121 tctttggctt aaatgcttgc aaaggagagg atatgaataa caatgaagat attaaaacag
     3181 tctatgcacc taatgctgta ggcatagatc ttaacacaaa aaccaatgaa tttttattta
     3241 atcaacgaga aaaacccact ggcaaataca ccaaagaata caccaaagcc cttttagaag
     3301 ctgtcaatat agtcgataat tccccttata aaaaatttta tgagcctaaa tatttagatc
     3361 cagagtttca cacaggagag aaatccactt tgcttgaatt taaagattgg caaaagatct
     3421 atttaaaaga tcctgttaaa ggaagcttag ctccttggac caaagcagaa aaagcttatt
     3481 ataattcttt agatggagaa ggaaggtata attatttagt aaaaagaagt ggcttagtat
     3541 gtactcccat agatttaaaa gatagtgctt taataagacc taaagaaaaa agatttattg
     3601 atgcttataa agaaggtatg aaagattata aagaagctaa gagactagat tataaaggat
     3661 atgatctttt tcaaaaagcc attaagaatt taagctatgc ttatgaagag ggtaaagatt
     3721 ataaagcagg acttgcttta gcagaacttg gatattcaaa agattatttt agagccatta
     3781 taggtaaatt agaccaagat gaaaacaatg aagctttgtt ggataaacta atcaatgaat
     3841 ttttaaatgc taattataga agcataagga tttatgaaga acttatagaa aagtatgact
     3901 taggggatgc ttattggggt ttatatgttt attctcgtaa aatagaagat acagtatttg
     3961 atgatagatt ttattttgct cagcttaaag atagcagtga agagctttat aaaaatgctt
     4021 ttgaacatgg atcttatgga gcttttggtg ctaaggcaaa tactatatat tctgatttaa
     4081 ttgcaggaga atatcaactt tgcttaggta tattgggcaa taaaaaggct ttttatgaag
     4141 cagctgtata tcttagtgat tctggtttaa aatcaagagc ctttcaagct ctttggcttg
     4201 gagtgcaatt aggagatgaa aaatgtttag aaggattgta tcgtccttta tatggaatac
     4261 atgaaaaccc tttaaaaaga caactcatga aagactttgc taaaaatcct ccttatgaca
     4321 aatacggaat gcttcctttt ttagatgagt taatctctac agaatggatt atagatccaa
     4381 atgaatatga tttcatttac gatattaata atagagtagt gacggcaatg ctaaatggaa
     4441 tcgataaggg taaatataaa gatccaagag atgtggattc tactcctgaa agtagatggg
     4501 aatttgacca agaaatagat gcttataaag aaggttctgt aagaagttat agttatgatt
     4561 tacccaatca ctggagtgaa gcagatgtag aaatttattt agaaaagctt tatttacatg
     4621 ccaaactcgc agctttaact cctcctcaag gctatcctaa tacaccaaga tactatagtc
     4681 ctgaaagatt agaatttatt tacaacaaac acaaacttga ttctaaactt gatcctagaa
     4741 tccctgctat ttatagagct aactttcctg aagagcttag agctaagata agagcttttg
     4801 ctaaagagta taatataaag gaatgaaatg aaaaattttt atatgaattt agccttaaat
     4861 gaggcttgga aatatcagtt tttaacctat ccaaatccgg ccgtaggctg tgtaatctta
     4921 gataaaaatg aaaaaatttt agccataaaa gctcatgaaa aagcaggatg tgctcatgca
     4981 gaattaaatg ctatagccca tgcttttaca aatttaaacc ctgaaatttc attacctcaa
     5041 gaagccaatg cgatgcatga atttatttgt aaaaaccata gaggtatttt taaagatagc
     5101 atagcctttg tcacacttga accttgctct catcaaggaa aaacacctcc ttgtgcaaaa
     5161 ctctttagcg aactaggttt taaaaaaatt ttcatcagcg ttaaagatga aaataaaatc
     5221 gcaagcggtg gggctgaatt tttaaaaaaa caaggtatag aggttgaatt tgacatactt
     5281 aaagaagaag gaaaaaaact tttaaaacct tttttaaaat ggcaaaaagg acaatttaaa
     5341 cttttcaaac tcgctctttc tatgaatggc tcgccttttg gcaaaatcgt aagcaatgag
     5401 ctaagtcgta cttatgcgca taaaattcgt tctgtgattg atttgcttgt gttaggagga
     5461 gaaacgataa gaaaagatcg tcccatactt gatgcaagac tttgtaaaag caaggcgcct
     5521 aatctttgta ttttaagtca tcaaaattta gaaaattttg acaaaagcat tcctttattt
     5581 agcgtgcctc atcgtcaaat ttatactcaa attcctaata aagctaaatt tttaatgtat
     5641 gagggtggag aaaatttcct aaaaaaattc aaagatgaga tggatatgtt tttgattttt
     5701 caaagttcaa gtttaaatga tgaaaaaaat gttacaatgc ctttgaattt caagccactt
     5761 tatagaaatt ttttagggag tgacacttat ggcatttatg agctttagcg gattttttta
     5821 tgcaagaaat gatttaagat tatttaaaat agaaaagaaa agcgaaatca aatctttttt
     5881 ttataaagat tatacgctag caagcttcaa agatgagcta aatttaaaca atgaaatctt
     5941 tttttatcaa agtttgaaag aaaatttgtt taaagaaaat gatgaaattt taatttcaaa
     6001 tttaggcaaa aaaatcatac tttttagaaa ttttactcaa aatagtgata attttgctga
     6061 agcaaaatta aaacaagtct tgcttttaat ttttttattt ttagcgagtg tattttttgc
     6121 aagcttggct gccatcaatg aatttggtgc tgttgatctt gtttttttga tgatttgttt
     6181 gttgcttttg gttatgggta tcatcaacct tggcttactt tttaaacaaa ttcgcatttt
     6241 aaaaagtttt agcaaagaag aaatgaaaga atttttaacc caaagaatga aaaaatacgc
     6301 aaaaaaataa acaaaaatac cttaaatttt ataaaaattt atttatttaa aagtgtgcaa
     6361 agtaaaatct tagcacactg tttttaaatt tgtagcaagt ccgcctaaag aagtttcttt
     6421 gtatttgtaa ttcatatcct taccagtttc atacatggtt tctatcacct catcaaggct
     6481 gactatagga atagatttgc gtgtcattgc cattctagct gcactgatag cttttatcgc
     6541 cccaaaagca tttctttcaa tgcatggaat ttgaaccaag ccccctacag gatcacaagt
     6601 aagtcctaga tgatgttcca ttgccatttc agcagcgttg caagccttaa aagcattggc
     6661 tcctaaaact gtggccatag ccgcagctgc catagagcta gcactaccaa tttctgcttg
     6721 acaacctgct tctgctccac taatacttgc atttttctta taaaaagaac ctataagcat
     6781 agctactaat aaaaattcaa ttgccttttc atcactaaaa cctatggtat ggtttttaag
     6841 ataaagcatg acagcaggga taacagcaca tgctccattt gttggtgcgg ttacgacttt
     6901 tgctccgcta gcattttctt cagcaatcgc aatagcatac aaagagataa aatcaataat
     6961 ccccatagga tcagtagtca tcgctactct ttctttaagt cctttagctc tacgctttaa
     7021 atgaagtttt ccaggcaaat aatcttcatt cgggtgcgta ccattataat acacttcttg
     7081 catcacttcc caaatttcaa gacaataagc acgaatttcc tctttagtgt gaaattgcaa
     7141 ttcataacga taagaaagct ctgccaaatc ccaatctctt ttatcgcaaa gctctaaagc
     7201 ttctttagcg ttattaagct ctatatctag ttttttcttt ttattttggt tggaattttt
     7261 accttttttt tctaattgtg cagctgttaa aacaaagcct ccacctacag aataataagt
     7321 ttcttcatcg actaacccac ctttacaatc ataagcttta attttcatac cattctcatg
     7381 taaaggtaaa aaatctttag aaaatatcaa atctttttca taattaaaac taagtttttt
     7441 ctcgccacaa aaatcaattt gagcattttc aatagcattt ttatttactt catcttgtat
     7501 tgccgcactt aaatttttag cttctaagcc atttaacccc caaatcacag ccttatcact
     7561 caagtgtcct ttgcctgtta aagacaaaga gccataaaga atgatttgaa ttctttcaat
     7621 tttttctaat tttttagcaa tttttttaca aaataaattt cctgcaagca taggtcctaa
     7681 agtatgtgat gatgaaggac ctacacctat tttaaaaata tttaaattac tcattcacca
     7741 caccttaaaa agtataaatt acagtgatga ttgttaaaac acctgtaata aaaacaaaag
     7801 catctaaagc tttattttgg aattttttca tttttgaaac cgtataaatt gcaataattg
     7861 gcattaaaaa taagattgct gcgataattg gaccgcccaa actttcaata aaacctaaaa
     7921 tactaggatt gatataagca gtaattaaca taacaatata cattactaaa gtagaataaa
     7981 ctgcgatttt tttcaaatca ggattttcat tacctgctaa tttgcagcat tttctaacta
     8041 taccataagc accttctcta gcgccaaaat aatgtccaaa gaatgaacta gaaattgcca
     8101 aaaatgcgat taatggacca ccataagaaa taaatggatt atcaagctta ttagcaaaat
     8161 aagaaagcac cggtatgttt tgtgctcttg cttcagcaag ttcagctgga gttaaagaaa
     8221 gcacgcaaga taccacaaaa aacataacaa aagcaagcaa catgacagag gttctaaaca
     8281 aaatttgatt tgctttttgt actgaatttt caggatattc tctttttacg cttagagaaa
     8341 aagttgaaat tgctggtgag tgattaaatg aaaacactaa aaccggtaaa gttagccata
     8401 ctatagtaat aaattctttt gttccaggaa tagcactaaa actttcaaat gaccattgtg
     8461 ggataagata taaagaaaat aaaaataaaa tagcacataa aggatataca agccattcac
     8521 acactttagt aatcaattct tcactaaaaa gcatgataag cataaaaaca cttaccaaaa
     8581 taaaagctaa aagcaaacga taaaaaggaa ataaactcgc tacaactttt tctttatcat
     8641 ctgtgcttac ctcatacatg gcacgaataa tatctgcaaa tacaccctct gaatttaaaa
     8701 ggggtaaaaa ttgatggtag ataaaacttt caaaagtatt ggttataccc acacaatacg
     8761 ctaaacaaat tggaaaaatt gcaaagaagt aaagcacaga aataaaaata cttacttttc
     8821 taccaaaata ctcttcagcc gcatgggtaa tgtctttatc attaccattt gcttggctta
     8881 caaaacggct taaagctcta tgacttagat aaaccattgg aaaaataatc aaagccatca
     8941 caacaactgg ccaaaaacca cccacacctg ccttaatggg taaaaataat atccccgcac
     9001 ccacagcggt tccaaaaaga gataaaaccc atctcgtgtc ataacgagtc cacttaggag
     9061 tattcataca ttttccttaa aatttgatat cgcaaaatta agcttatttt aacacactta
     9121 ctgggtaaaa aatctaaatt tctagcattt ttctttaatt tatgtaacat tttgtaaaat
     9181 attagtctta ttaaaattat attttaagat ttaatttaat taagttttgg agatggtttt
     9241 ttatataaaa aaccatattg gattaacaaa gagaaatttt taaactcatt taaaaatttg
     9301 gaaacataaa gtctccaaat ttacatgctt ttagaattaa taatcaaatt tttgtcctaa
     9361 gatattaccc tgtgcatcag tataaatttt taattgattg cttaattcaa atttatatcc
     9421 gttgatttct ctgcttactt ctatgatttg agcgtttgat gaagcactga tttttggcat
     9481 aatatttggc aaaatgctat ttggcagagc tttgtatttt ccatctacat ctttccactc
     9541 tccagtgata ataaagtcaa tttctgttcc atcatttaaa gtcacatcat aagaatctat
     9601 atcttttttt actaaagcaa tttgtgcagt tttaaaattc ttagatataa aatcttgtgc
     9661 atttcttgga agttcactcg caggaacaat tatatctcta gcaaaaagca ccgtagcacc
     9721 caataaagcc gctaaaccta attttaattt cattttttct cctttttgtt tgtgttttgg
     9781 ttgagagaag tttaacttat ctttgtgaag tgaatgtgaa actaaaaaat aatttttaaa
     9841 ctctcatttt caacacctat gccttgactt ttcttaaaag aaagtattct accatcttca
     9901 aattttaaag tatcaccatc ttttaaactt agatcataag ttaaaatatg caaaataatg
     9961 tcatacaaag tgaagaaaag ctctttttct tctatatttg catcacaaac ctcaagctct
    10021 aatttatcga aatttctaag accataggtg taggcattat tgccattatc acctggataa
    10081 acgcttacat aaatccaatt ataaataggc aagcgatttt cttttagcat ttttgcattt
    10141 tctatataaa acttaggctc taaaacaact cctcctgtat aaaatcccaa agtatgctca
    10201 tcttgcaaac acgcagatga tatttgagta aaaagtttag cttgatctag ctttgattca
    10261 ctctgactta aaacggatac aagaagatgt gctttatgtt tttgggtttg ctctaaagca
    10321 tctttccaca caaaattaaa attagcataa tattctgctt cgttgttggg tataggattt
    10381 ttaatcaaat ttaaagtaac gatcatattt ttaaaagaaa aaattactcc atcttgagta
    10441 aaattttcat cagcaatcca tatatcaaaa tcatcttcaa gtatcttttt caatttcaaa
    10501 aaatcaaact tggcttcatc aagaagaaca aaagaaataa aattatgatt ttcttgcatg
    10561 cttttcctta agagttaaag tatttaaaaa attataacct aaatttttaa gccaaaggct
    10621 tgtgaaatta tgattattta aaaaattatg ataattaata ttaattataa ttttattttt
    10681 attgtagtat aatcgccaaa atttaatcaa atcatggagt taaatatgga atttttaaaa
    10741 gattatattg atttaattat ctttataatt ttaggagtta tggcatttat agctttttgg
    10801 tgcgtaattg aaagagtatt attttttaga aaaatagatt ttaaaaatta tgaaaatcaa
    10861 gagcaatttg atgatgcaat tagcgagaat ttaactacca tttatattat ttattctaac
    10921 gctccctaca taggactctt aggaactgtt gtagggatta tgattacttt ttatgaaatg
    10981 ggaatagcgg gaaatatcga tgtcaaatcc atagtcgtag gactttcttt agctcttaaa
    11041 gctacagctt taggactttt agtcgccata cctgccttaa tggcttataa tgccttactt
    11101 cgcaaggttt cacttttaag taatgcttat aaggtgagta aaaatgctta aattgcctaa
    11161 aaatgaaggg ttaaatatag ttcctttcat agatataatg cttgttttac ttgctatcat
    11221 tcttagtatt tcaactttca ttgctcatgg caaaattgaa atcaatctac ccgttagcga
    11281 aaatgctcta agtcttaaca atgatgaaaa aaaattatcc attagcattg atgaaaacaa
    11341 tattttctat ctagacgata agactacaga tttaaaaggc ttaagcgatg ctatttcttc
    11401 gcttcataaa aaaactatag tagaattaaa aagtgataag aatgcaaaat ttgaaagctt
    11461 tgttcaaatc attgacttat taaaagctaa agagcatgag aatttccaaa ttacaacaga
    11521 gaaaaataga tgaaaaatac tttgtcaaat cacaaatcac aagcttttta tatatctttt
    11581 ttcttagctc tagtttttta attctgctaa tttttgaaaa atagaattaa atagctttgc
    11641 tttgactcta aaacaatcta taacttaaac taatcacaaa agctaaaaaa cctgatacaa
    11701 aactaataag agcgcttaat ctacacccaa agtaaatact ataaatattt catttatttt
    11761 taaattttta cactcttttg ttcacaaata tggcttcatt gttacttatt tgcaccatta
    11821 aatctttttt taaattttgc tctaaattcc ctaaagactt attttgaagt tcttcaaaaa
    11881 tttgtggatt acttgcttta agtttggctt gctcatctgc actcaaagca cttagtcctt
    11941 tttctttggc aatttcaagc aaatctttat cgtctttttc atctttctct ttaattgtga
    12001 ccccactatc atctttttta taaatctttt gtggatctat agtttgcatg gcattagctc
    12061 tacccgatat tttgcttata tcgtttaaaa tttctcccat gctaggctct ttaacatcat
    12121 tatcatcgat cttgccattt ttatccctat ccttatctat aaagaaattt aattttttct
    12181 ccatgcttgc atcattgggt attttttcat catttgattt aaagcccaaa ttttgcatac
    12241 tttgagtgat tgtatttgta tgaaaattta attttatatt tttatcttga gtattagagc
    12301 ttaaatttga acttaaagaa ttaaaattat cttctatatt ttcaaaccaa ttagcaataa
    12361 attcatttgc ttcgccatta agccttatac ttccatcatt tcgagcaaca taatttgtat
    12421 aagagccaaa attcttttgc aaactactat aattttcatc acttaaattt aaagctataa
    12481 gttcaccttg cttattttca aaaacaacct taacaccatc gctatttaaa ctcgaaagat
    12541 cttgcacggg aattttatct ttctcttctt tttttaattc taaaatttct ttacgatttg
    12601 taacattttg agaacttggt aaagaaacat taaaatcatt gattgttaat ttatccataa
    12661 taactcctta gaaattttaa agcccaagca tttaacttgg acttgtttat tttatttaca
    12721 agctgcaaat aagcccaaac gacacatttg tctttgatat tgagtaggca aagaattgca
    12781 tcgtttcaat cttatttcat aatcaacgca agaacttcta acttgtgggc ttttattatt
    12841 ctcagttttg ccataagcaa aagaaccaat aaagcaagca actagtgcaa cagagagtaa
    12901 ttttctcata gtaaacctcc aaaaataatt gtaatcttaa aattatttga tacaattaca
    12961 aatttgatat cggcaaaaaa atcaaattta tttatactaa caaaattatt ttttaaaaaa
    13021 ggaacataaa tgaaagcatt agctcttttt agcggcgggc ttgatagtat gcttgcaatg
    13081 aaactcatca ctgcacaagg catagaagtt aaagctctaa atatcaacat aggttttgga
    13141 agcacaagtg ataaaagtga aatcatgaaa aagcgtgctg caatggtagg tgcagatttt
    13201 gaaatgatag atgtaagaaa ttcctatctt caagaagtgc tttttaatcc acaatatggc
    13261 tatggcaaac attttaatcc ttgtatagat tgtcatgctt ttatgtttaa aaccgcactt
    13321 gcaatgttaa aagaagaaaa cgcaagtttt atcatcacag gagaagtttt aggacaacgc
    13381 cctatgagtc aaagaagtga tgcgatggct aaggttaaaa agctggcttt agatgaggag
    13441 gatttaatac ttcgccctat gtgtgcaaaa aatttgcctt taaccaagcc tgaaagagaa
    13501 ggttgggtgg atagagaaaa gcttgaaggc attagcggaa gaagtcgcaa aagacaactt
    13561 gaacttgctt ctcaatttgg cttagaagac tttgaaagtc ctggaggagg atgcttgctc
    13621 acgcttgata gttttgctaa aaaaattcgc gactttatag aatttgataa agatatgcaa
    13681 gtaaatgatg cgcaactttt aaaatacgga cgccatttaa gactgcctaa tggagctaaa
    13741 atgatcatag gtagaaatga attagaaaat gagctgctaa gaaatttaaa aacacccaaa
    13801 tatgaagtga tagaacttgg ggatttaatc ggtgcttatt ctttacttag tgcaaatgca
    13861 gatgaaaaag atttagaact cgccttaaaa atcgctctaa cttacaccaa gcatgaagca
    13921 aacaaaagct atgaacttcg atttaaagat aaaagctata aaagtatagc ttttgaggat
    13981 aaaaaagaaa tcaatccatt tttcatttct taaacttaaa aaaatacaga agccctgaga
    14041 taaataggaa tcgtttcgct tggcatattc gaagatttat gcagggcttt agaagctgtt
    14101 aaatttaaag aaagatgatt taagttgtat ctaaaaccaa aggcgacacc ggctaaaaaa
    14161 tctttattgg gtaaaagata atccctacca taacccatat ccaatccaac aaaaggctct
    14221 aatgctctta aatatttagg cgcatttaga aattgcaaat aaatcgtatt gttactatat
    14281 gctccataat caagagcagc agagctttct ttaaatcccc taactgtgta ttcatcaccg
    14341 attaaaaatt tatcagcata caataagggt tcattagaat aactcgcacc caagctgttt
    14401 tgatataaaa atgctaggcc atcatttgca taaaaacttt tttgatagct taaattaaaa
    14461 ttgactttgt taaattcgat tttatataaa gaatctttag aatctttttt agaacccaaa
    14521 aatggaattc ctttttcgta ttctaaattt aaaaacaaaa atccaccaaa tgccagcgtt
    14581 gaatactcaa ccccgctagc aatacttgaa tacctaccac ttgaactctc taaacgaaaa
    14641 ttatcaatct cattaacatc atctttaatg cctaaattag cataaattga aaatttatcc
    14701 ttgcttgtgc gatgtaaaat cttttttaac atgattttat gtcttaagct tgtatctgta
    14761 ttttttataa aagaattatc atatccctca atcatattta tattatcact atattgcata
    14821 gaataagaca attgataact ctgtatgggc aaggtataat ttgccacata aacattttct
    14881 cgctcttgac tcatatcttt taacaatcct ttgataaaac caaagcgtat ggagtcgtta
    14941 agatttaaaa tattacttaa agaaagatag gcactagctt tatattctcc tttagcttta
    15001 tagccactat tatcaaagtc caatatcaaa tcaggtggct ttgatttaag attgataaat
    15061 atatcagaat aaccataatt ttcactcgct ttaacagcga ttttaacatc tcttgcgcca
    15121 ttgtttaaat tttctatacc tgtatctaaa tcataaatat tgaatttatc accctttttc
    15181 aaaggcatac caaaatctaa tcttgttgta ttattatccc cattaagata cacctctcct
    15241 acaaaaccat attttaaatc aagaaaaagt atatcgcgtt cttgatcaag ctcatcaatg
    15301 gttacactag aagttgaata gccattcgca acgataaaat ttgtaagctc tttaatcata
    15361 ttataaatat cattaacact taaaggctga ttaatgtatt ttttaaaata ttatttgctt
    15421 gcatggtaag cgtatcgttt ttcttaaatt gaatttgttt gaaaatataa attttatctt
    15481 cagaatcttg attttctaaa tacacatcct tttcttgctg ttgctttttt tctaattcat
    15541 caaattcttt ttgtatatgt aattgttgtt gtcttttatc tagtaaattc agcgtttttg
    15601 cagagtcatc tgcttgcaat aagcagataa aactcataag caaaaaaata atttttaaaa
    15661 atttcaccta taaccttgta gtttgtgtgc tttcattgat ataaggtcca tctgatttag
    15721 aaggttggtt tgatggttga ttagaagtag aatcagatcc agtaaccttg cttatcccat
    15781 tttttatttt agagattgaa gaattaagat ttatagtacc tcctgcccaa gaatgatctt
    15841 gtgtatctgt ggtattttaa gtatctgtac ttataccatg atttttgtta ttgtttatat
    15901 tgatattggc tgcagaattt acactgcctg tcttgtcaat atgatcatct atatcaacca
    15961 ctcctccaaa gctttgattt gtcccgccac ttaatcttat cgtagccaca tcgctttttt
    16021 catagacact tacttcagaa tttgtaactt ttccatcaac aagtaaattt cctttttgat
    16081 tatcagaatt taaaattccc ccttgcaaat ttaaatttcc attaacatgg ccattgattt
    16141 catttcctgc actgatacca ctttgagttg taacagttgt tttatctgtt ttagcatatc
    16201 ctatacctaa agtgcctgaa acacttcctg taacaagatg attgcttgat aagcctccag
    16261 ttcctgatgc attcaataaa gcgctatatt tttgagaatt aagactatca gctaaagaat
    16321 ttacttccaa atttccgcct acatttaaaa tagcatcatt agaagcttta acattggctc
    16381 cattgagtgt aaaatcttta cctgtgttga tattgatatt attagcattt aaattcgcat
    16441 tggtaaattg cgtttcgttt gatttagaat acgacgcact tgcaaaacct tcaatgcctt
    16501 cacccacagt tccaccatca actgcatgat atcctgcggt ttgcttgtta gttgctgcaa
    16561 tttccaaaga agagctagaa gaagaatttt tagattttgc agcatttaaa ataacattat
    16621 cttttgcctc gatattaatg ctattagcct tagcttccac tccatttaaa acaatacttc
    16681 cttttgtgct ttctaaattt aaattatcgc ctgcattgat tttagaaata ttctcgctag
    16741 aactttggct tttatcttga ttgaatttaa aacctagagt ttgattagaa gtggtattta
    16801 tgagattgtt gctaaatata ttagcagtat tggctaaagc ttgagaagct actattccat
    16861 aatttacgcc taaattttca ttcttagcag ctgcattttg agccgattga ttgatagcag
    16921 aagcgatagg actagtagct tcaattcttt ctttaatata caaaccaaag cctgtactgc
    16981 tttgtgtttt agtatcttca tatttagtac taacaatctc tcctgctctt aaattaatat
    17041 ccttattagc ctcaaaatta gctccaccta tatctaaagc attatttgca ttgatattaa
    17101 tatttgaacc tttgatagta tttgaaacat gggaaagctc atcacttatt ttttccgttt
    17161 tagaaaattc caaaccagcc tctgcagttc ctaaaagatc agatcttacc ccaccttgtg
    17221 tgatactatt agaactattt gtggtattag catttgcttt atcttgcaca aaactataat
    17281 ttacagcaac cccatttccg gttaattcca aattagcatt agcaaaaacc ccaatagcaa
    17341 tcgaatcgct ttctgtatgg gttttatttt gcgcagctat aaaataaacc ttatcagcct
    17401 taatatcaat ctcgcctcca ttaagctcac ttcctttaat gcttacattt ttttgagcat
    17461 ttaaatttaa aatatcggat tgaatttgtg atgaagacac caaagaagta tcagtattta
    17521 cagaactttg cttatatcca gcaatagaac ttgttgaaga atgagaagaa cttgaaattt
    17581 tattttctcc atttaaatta gcagatttat ccgcttgtaa agttgagcct gtgattgcta
    17641 tattgccgtt ggtattaata ttaatatcac cttttgaatt taaagtactg cttattgatt
    17701 ttgaagtttc taaattagca ctttcataac tgatctctac gggttttaaa tacacaccat
    17761 cggttttagt cttgctaagc tcgtgtgcat ctttaatatt agcattgtta gcattgatat
    17821 tgctagctat aatatttaca tcttgattgg aaacaattcc tacatttgct cctttgatat
    17881 tggtgcttaa aaccccatct atactcgttg tagtattgga tttttgacta tctgtattaa
    17941 tttgctcaaa tgaagatgat ttagaataat cgtttttaat atttacatca cccttttgag
    18001 atataagaac aattttagaa tcattcgcac tagtagaaat atcactattt ttgatattta
    18061 aatcatttac cgaatcaata ttaacaacat tatttgcttt aatctctcct tttttaattg
    18121 aattataaga gcctttttca tctataccta aaacagtgtc tatattgaca ttattggcac
    18181 ttaaatttat attttgcgca tttaaattag aactttgcaa attaatctcg ttgccagcat
    18241 tgatattaat ctgaccctct gaagctatgc cgcctaacaa agaattaaat gattgcgtat
    18301 taatatctac gcctgttttt cctgtaagat ttgattttat ttcattattt ccaattgtct
    18361 ctttagaaag atacaacata ggagccatga tatttttacc gttttgtttg attgttacat
    18421 ataaaatcat atcttgatca acagcttgat ttttagccaa accttgaccc aaatttaagc
    18481 cattttcatt ggcatatttt gctccatttt caagtaattt tttgatttct tcttcgctca
    18541 atttagtatt ggattgtagt gcgtttgcat acattgcgtt aataagctga ttttcaaaaa
    18601 aggatctcct ataactataa attcgttgaa atttttattt ttaaattgat ttaaaatact
    18661 taaaaatcca aaatacttgc tttcatctat gatagaagta tttgtagtgt attcataagt
    18721 aatattatca tttgttttat tttcaagagt aaataagcct gaattgataa gatcaggtat
    18781 agaatttaaa attaaatctt gactatttgt cgcttttttt aaatccgaat caagtaaggc
    18841 aaaattttta tccaaagaac tgactaaatc ttgattgtat tccttagcat taagatctaa
    18901 tttacccttt gaagcaataa cagcctcgga ttttgcttta aaaacaatct ttgcatcaag
    18961 attccattct ttttgatcag gaacaaatct ttttgaagca taatcactac caaataataa
    19021 agaaaaatat tggtttaaag ctgaattttt agctgctgca tctttaagcg cattccacgc
    19081 tgattctctt tgatgatttt ttgcttgggt ggtagaaaaa tatttcaaag catcaagcaa
    19141 gctttcatga tctacaaaat aataagttga atttgtattc caagaaccaa gatattcttt
    19201 agcaaaaaat ccattaactc taatttgctc taaaatttca cctacagaaa tttctttact
    19261 taaagactta ttgtctatat ttccaaaaga tacgatattg ccttgagcaa gatttttccg
    19321 ctgttgttga tttgtctagc attatcttgt gattgggtat tgatatttat atctttacct
    19381 gcttggatag aagcttgctt gctgtctaat aaattgttat attttacaat acccgtaaca
    19441 cctacttcca tattccatcg tttaaaagca gtatcaccgt accctacttg accaaaacct
    19501 tgagaatact cggtcgaagt ctcaagcatg cctgttaaat ttgcattatt atttaaaata
    19561 tttgcctcga tattgatatc tttatctgca aaaattaaag cattattatg aatcgtatgg
    19621 gcgtttaaat acaaattatt taagctatta aaagtggaat tatttgtaag ggttgtagct
    19681 tgggctctaa gatcaccatt tgaaaataaa taagcatcat ttacaagatt ttcatctgca
    19741 tgaagattta attcttttcc actagcaaca aggtttttaa cataaatatt tttcgcatca
    19801 agctctattg aagaagtatt ttcgagtttt gaattgatat ttaaatcatt caagcttttt
    19861 atatgaagca aattttgtgc gtataaattt ccatgattta aagttaaatc tttattagct
    19921 tgtatttgaa tatcattttg gcttaaaatt ttgccattat taataaaagc atcatcatta
    19981 agcattaagc ttatatcttt atttgctgaa atttctcctt gattgtcaaa agaatttgta
    20041 cccactttaa tatcatttaa agcattgata aatccaaaat tgctagtttt atctagggta
    20101 tttaaagtta aactgtctgc aaaaatactt gaattttctt gatttatctt aaaaatatct
    20161 tttgtttctt ggctcaaatt tgtttgcttt gcattttcaa aattattggc attgatttga
    20221 atttgcttgc ctttataaag tccttcattt gtaacttttc cacttgcttt taaatcaatt
    20281 gtatctgcat tgattaaaga ggttttaata tctttagcgt ctatcttaac acttccattt
    20341 gtatttacac ctatagcttg aaattcagcc ttatctttta cttttactat aacatcttca
    20401 attccgcgta ttactccact atgtcttaca ccaacaccct cttctgtgct aataagagta
    20461 actgtatttg catacataga tcctaaatat ttcccatcaa taccataatc aattttttca
    20521 tctttttgtt ttgaagcaat aatttttgga gcatttggag tacttaaatc gaccttatta
    20581 agcccagcta taaaattaat atcggataaa tttttaccac tttgatagtg ggcaatacta
    20641 cctgcaaggt caatcccacg gctgattaca ttaaaataat ccctatcaac cattacccct
    20701 tttctccaat ggctacccta ccattgcttg ttacttctgt aaaatctcca ttgaatttgc
    20761 ctgtgctaag tgtaactcct ttagtattta aaaaagccgc tccatttaca ctaaaaccat
    20821 tttcattagc aaaaattaaa ttagcacttt ttccaaatac ctcaacagcg ccattgatat
    20881 tagaagcttg cttacttgaa atttcattta taatagtatt ggcattttgt tttaaatttg
    20941 gatttttccc tacccatcct ccaatttgag aatttccatc ttttaaacta ttattaaaaa
    21001 ttactccatc ttggacactg aattcatcaa attgattgtg tgatactcca ttttgatttg
    21061 ggtttttgat attaattaca tcagttttat tgcttgattg cgtaagatct gttgttcttg
    21121 aaacaataac attaccattt ctttgacgca agtctgctga gaacaatacg caaggaaata
    21181 aagcaccaag gagtgttaaa ttcaacgata aacgaacaat tttcttttta ctaaattcca
    21241 tcaatcc
//
LOCUS       DAQUWA010000028        21180 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.028, whole genome shotgun sequence.
ACCESSION   DAQUWA010000028 DAQUWA010000000
VERSION     DAQUWA010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21180
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.028"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            12..905
                     /gene="msrP"
                     /locus_tag="R8X70_000903"
     CDS             12..905
                     /gene="msrP"
                     /locus_tag="R8X70_000903"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEF2928690.1"
                     /translation="MIVTPEKLYKQRRDFFKLGAGALIGSSLIVSKLSALNFINDTNA
                     NKLEISNEELATNYINFYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPFTLSMEDI
                     LKFPLEERIYRFRCVETWSMVVPWVGFELRRLIDMAKPTSEAKFIKFTTLLDKNQFPD
                     QDALFPTVEYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIEFVKEQPIGTWEKYAPNEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYAGMDLKANY"
     gene            905..1453
                     /locus_tag="R8X70_000904"
     CDS             905..1453
                     /locus_tag="R8X70_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HEF2928691.1"
                     /translation="MRTKYFKFLAYFAFLASLIYGFYHILKAFDFVKEAYIYTGVFAL
                     FFLNLSLLFSLCKFKKTKSYPKLLGIFAAFWAFLHFLNYFIFDRNANFLRLFDDISHR
                     LLEASGFFAFIIIFFMFLSSFRFFKRIEKIRKLGYVCLVLASYHYFLSPKVPMFWEWS
                     ALMLSLVYFMIRYLKFFKFKKA"
     gene            complement(1450..3162)
                     /locus_tag="R8X70_000905"
     CDS             complement(1450..3162)
                     /locus_tag="R8X70_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2928692.1"
                     /translation="MVRLKEFLSLKNIEESQIYKELKCSKNEALILRELCKNYVISIS
                     SINAFTLLTGIFGSEKYSYLDTLEDLKRLIERGFVNQNSGFFKNIESNKSQNLILSLL
                     QSELSLSEYFLEFLEAKPRLNLDKKEAYGEYLEYLKDEFMRVELYERLSFIRSSTYSD
                     ELKAQIKLYEKHIKERLKKSKFYNILADIFKEYSLEYKEQIIFLALLKEEYTLSNENS
                     VSREMNSLLSLVSENDLEKHKNKSLLQENAPLLNLIEYDEYLNAFGDISKSFFITDEI
                     LQRIINFEPKQNKKIKIENVLKEQDIFELIEPSIDINDIIMPQNTKELLENILKQQDK
                     KVLERLNSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKTVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVESSSGSDKMHNQMQNIF
                     LEQIERFNGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKMWEKFLPRKASFE
                     KAFDVNLLANYELSGAQILMVVKNTALKVAVTEDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(3164..3985)
                     /locus_tag="R8X70_000906"
     CDS             complement(3164..3985)
                     /locus_tag="R8X70_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928693.1"
                     /translation="MKIGLLLCFFVSLVCAQIYKGEIYFYDLKDKQVFAIVYDNAPFV
                     PIFDRDVNQTSSSFLILSDLDTNIEIALFQTANSWEDGEKKYKISSSKELVFDNKKIQ
                     GNKLGTTTLELIKEQNNIRIKRSLDFLAHQDEIRQFRPMYNDIVSFEQIRQKPIVLKD
                     GKLSFEEWYYFYEEDNRAILELNNFVFDMDKKVFLSLNELYDVDNLKFKELLHQKLNL
                     VCDECFDDMEQVFFNNNFLITNLGLRLCYLPYENHYLNENICVDFNENEIKEFRK"
     gene            complement(3982..4464)
                     /locus_tag="R8X70_000907"
     CDS             complement(3982..4464)
                     /locus_tag="R8X70_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928694.1"
                     /translation="MRKIFIFFLILFFSACALKNQDYSSQKMKVVFSTPTIKINDFGF
                     LKKENKALNLEVYKLGQAFFKLKIREDICLNSVCYSKMVFNQKFFKNAYYEDILKDIL
                     EAKPLWNGKNMQKTQCGFNQNLNSANYEIFYEICDNKISFVDRISRIKIVLMNFKDKI
                     "
     gene            complement(4475..4966)
                     /locus_tag="R8X70_000908"
     CDS             complement(4475..4966)
                     /locus_tag="R8X70_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HEF2928695.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIEF
                     SEKDGVFKLHSSSEAKLDVLKDIVISKLIKRGINSSAIKELSRESGAMFRLNLKANDS
                     IDSENAKKINKAIKDSKLKVSSSIRGDEIRVVAKQIDDLQAVMKMVKELNLELNLSFK
                     NLK"
     gene            complement(4956..5891)
                     /locus_tag="R8X70_000909"
     CDS             complement(4956..5891)
                     /locus_tag="R8X70_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEF2928696.1"
                     /translation="MKIVCLDAATLGDYDLSIFKNFGEFQSYALTDRKETIERLKDAD
                     VVMTNKVVIDKEVMDACPNLKLILETATGVNNIDVEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFIFAFLNHIPYYDKWSKEGKWCDSPIFTDFGRILNSMEGKKHGIIGLGSIGKEV
                     AKISSAFGAKICYYSTSGLNQNAEFECLNLEELLRTCDIVSIHAPLNEKTKNLLTYEK
                     LKLLKDNAILVNVGRGGIINENDLAKIMDEKNIRVGLDVLESEPMIKNHPLLNIKNKE
                     NLIITPHVAWASKEAVEKLMSMVYDNLKEWIENGK"
     gene            complement(5894..7063)
                     /locus_tag="R8X70_000910"
     CDS             complement(5894..7063)
                     /locus_tag="R8X70_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HEF2928697.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISDKLVCVSENEAN
                     AYYEAVNELYDMFVAAAQNVIDNNRFDELGIPFNLVDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWAILKQNGMDESKQFNSIYESLMDNFKRLI
                     TLEEDTQGFEEYYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFETDFSFVDEVEFS
                     EEGIFKEGVNYEYWFKLVPWEDIAIEEGELAMLLTQIMRNQKAIILNPAYTLLFQSKG
                     ILKILWELFPNHPLLLETRDVPLEGKDYVKKPVFGREGANISIIKEGKILHENVGPYG
                     NNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(7073..7678)
                     /locus_tag="R8X70_000911"
     CDS             complement(7073..7678)
                     /locus_tag="R8X70_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HEF2928698.1"
                     /translation="MKKIKKIIQIGMISGLAAVAGGALVGCGSSNDNSDTLNQAANTQ
                     GAFVIIEEIAPGQYKIKDQFPSDETRVVLKDINGTERVLSKEEMDALIKEEAAKIDNG
                     TSNLTKEGGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTAGSASSASKSGFFGGGSKATSSSSSFGS"
     gene            complement(7879..8091)
                     /locus_tag="R8X70_000912"
     CDS             complement(7879..8091)
                     /locus_tag="R8X70_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEF2928699.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            8237..9613
                     /gene="ccoG"
                     /locus_tag="R8X70_000913"
     CDS             8237..9613
                     /gene="ccoG"
                     /locus_tag="R8X70_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEF2928700.1"
                     /translation="MENHITNYTKKRYFVYLIATIVIFCLPFITINGNHFFLLSFDHS
                     KLNLFFISFSTQELYLMPFLLIFLFLFIFFITTLGGRVWCAWSCPQTIFRVIYRDIIQ
                     TKLLKIRKNINNKQKEYEGYYFKKIIGVILFYFISLVAVSNLLWYFVPPEDFFAYIQN
                     PGEHLLLLGVLFCASLFLTLDITYLVEKFCIYVCPYARVQSVMFDRDTMQVIYDEKRG
                     GVIYDGHTKLYKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSVKAIETRKKVNYLRFRTIAYFIVLVIALIALMIMGSKKENMLLNIN
                     RSSELYQISHTNNGLEISNAYTFLFQNTDSKAHEYYFEASLEGIDNGIEIIRPSKAFT
                     LKAGEQAKKIVVIKATKKLADNDQKDVIFPLHIKAYAKDNDEIVIFRESIFVYPKSTI
                     LKGYNESK"
     gene            9600..10235
                     /gene="cmeR"
                     /locus_tag="R8X70_000914"
     CDS             9600..10235
                     /gene="cmeR"
                     /locus_tag="R8X70_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HEF2928701.1"
                     /translation="MNPNKTPSKKVLARREKIKNVAFDLFLTKGFQETSLSDIIKLSG
                     GSYSNIYDSFNSKEGLFFEILDDVCKKHFDLIASQTQTIKDKNLKEFLTSFGLTFVDI
                     FNQVQTVAFGKIIFSQVYDKHKHVENWIENNQKIFSYNILIELFKKQDSSYISNNAQK
                     LAMLFCAMLREPYHSLNVLADTPLMNKQEQKEHVEFIVNIFLKGIENKTSI"
     gene            10343..11446
                     /locus_tag="R8X70_000915"
     CDS             10343..11446
                     /locus_tag="R8X70_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEF2928702.1"
                     /translation="MNLFQKNTLLLLSALFLFSACSKEEAPQKQTPPQSVSTMSAKAE
                     NLPLNFTYPAKLVSDYDVIIKPQVSGVIVEKLFKAGDLIKKGQTLFIIEQDKFKASVN
                     SAYGKALMARANFDNASKDYNRSKTLYNKGAISQKEYDSALANFNNTKANLTSARADL
                     ENARIDLAYTEIKAPFDGIVGDALINIGDYVSSSSTELVRITNLNPIYADFYISDTDK
                     LNIVRNTQDGKWDLSNIYADLNLNGEVVKGKLYFIDSVIDANSGTVKAKAIFDNNDST
                     LLPGAFATITSNGFIQKNGFKIPQIAIKQDQNEVYVFLLKEGKVAKAPVHISYQDNEY
                     AIIDKGLQNGDKIILDNFKKIRLGSEVKEVGAQ"
     gene            11446..14568
                     /gene="cmeB"
                     /locus_tag="R8X70_000916"
     CDS             11446..14568
                     /gene="cmeB"
                     /locus_tag="R8X70_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HEF2928703.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGAIGLVNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIATTVANPIEDAINGADNMIYMDSTSSSSGTMNLTVYFNIGTDPD
                     QATIDVNNRISAATAKMPDEVKKLGVTVRKTSSTTLAAISMYSSNGSMNAVDVYNYIT
                     LNIIDELKRVPGVGDANAIGNRNYSLRIWLKPDQLNKFGITATDIIAAVNDQNNQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQSPSEFENIILRANNDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIIINLQSGANALNTAKLVEAKMQELSKSFPEGLEYKIPYDTTKF
                     VIESIKEVIKTFVEALILVIIVMYMFLKNFRSTLIPMIAVPVSLLGTFAGLYLLGFSI
                     NLLTLFALILAIGIVVDDAIIVVENIDRILHEDEKISVKDAAIQAMQEVSSPVISIVL
                     VLCAVFIPVSFISGFVGEIQKQFALTLAISVTISGFVALTLTPSLCALFLRRNETEPF
                     KFVKKFNDFFDWSTSVFSSGVAYMLKRTIRFVIVFCIMLGAIFYLYKQVPGSLVPEED
                     QGLMIGIVNLPSASALHRTISEVDSMSQEILKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLKDWKDRNVSADEIIMELNKKFAPDRNAASVFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDQIQEDVNKLVAAANQREELYGVRTTLDTSFPQYKLIIDRDKLKHFNLNMQDV
                     FSTMNATIGTYYVNDFTMLGKNFQVNIRAKGDFINTQNALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNIFPAAQIQGQPAPGYTSGQAIEAISQVAQETLSDDYSIAWSG
                     SAYQEVSSKGTGSYAFALGMVFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKKIFDAAIEAAKLRFRPIVM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKRGKVHE"
     gene            14561..16039
                     /gene="cmeC"
                     /locus_tag="R8X70_000917"
     CDS             14561..16039
                     /gene="cmeC"
                     /locus_tag="R8X70_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HEF2928704.1"
                     /translation="MNKIISINVIASLSLFISACSLSPNLNIPEANYSLDNKLGALSW
                     EKENNHTLSKEWWKEFDDEKLNHVVDLALQNNNDLKLAFIHMEQAAAQLGIDFSDLLP
                     KLDGSASANRAKTPTNAPSNRTGGVSYGNDFKMGLDLSYEIDLWGRYRDTYRASRSGF
                     KASQYDYEAARLSIVSSVVQTYFNFVNANENEKALKDAYESAQEIYQINYEKFQVGAV
                     GEYEIAQSRANLESTALQYNEAKLNKENYLKALKILTSNDLNDILYQDQAYQVFKLKD
                     FDIPSGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPNLSLTGLLGFESGDLNT
                     LVEAGSRTWSIGGNFVMPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLVAAFGEIRYAL
                     IARKTIRLQYNNAQANELSYKRIYEISKERYDVGEMSLQDYLQARQDWLNATVAFNNT
                     KYSYANSIVNVIKAFGGGFEQGENISKNIEEESKTLDMSFRE"
     gene            complement(16068..16319)
                     /locus_tag="R8X70_000918"
     CDS             complement(16068..16319)
                     /locus_tag="R8X70_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928705.1"
                     /translation="MDKTKVVENLNALFKQRAEFYSYFDKNISKVGNTEVFDFSNAKD
                     LNAEEVYKQFYHLDYAMRKLLPAIYKAYEVSDSDLNRDF"
     gene            16443..17753
                     /locus_tag="R8X70_000919"
     CDS             16443..17753
                     /locus_tag="R8X70_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HEF2928706.1"
                     /translation="MNLFQNLALKYSHAMMEKSLHKSFNVELLKNPQEKQAKKDKTYM
                     LYAHIPFCHTFCPYCSFHKYYYDEELAKIYFENLRKELMLIKDKGFDFSSMYVGGGTT
                     LINENELLKTLELCKKLFNIKEISCESDPNHIIPEKLSMFKGIIDRLSCGIQSFDDEI
                     LKKIARYNKFGSSKQLQEKISKALGILPIFSLDLIFNFPSQTEEQLLNDLKIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVETKDNEFKYYQMIRNFFKDYQQNNGWSFSLEKNQ
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFDLNDYAKMIQEKQNANIAKASFTRKE
                     IIKYIFLTEMFAGKIQIDKFNQTLNCDLEKELFKELLGLKISNAIKKENGALITSEFG
                     QYLFVVLMKDFYTGMDLVRAVFRDSKRLKNKDFINIMKENISSI"
     gene            complement(17787..18239)
                     /gene="hemJ"
                     /locus_tag="R8X70_000920"
     CDS             complement(17787..18239)
                     /gene="hemJ"
                     /locus_tag="R8X70_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HEF2928707.1"
                     /translation="MTEWINEYYSWIKWVHYLAFVSWMAGLFYLPRLFVYHAENKNNK
                     GFVDVVKIQERRLYFGIQNPAMIATVISGSLMLHAHKEVLMVGSGFMHAKLTCATLLI
                     IFHIHNYFCLKALANDTSTKSGRYFRIYNEFPTLMFIIIALMMVIRPF"
     gene            complement(18223..18693)
                     /locus_tag="R8X70_000921"
     CDS             complement(18223..18693)
                     /locus_tag="R8X70_000921"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEF2928708.1"
                     /translation="MVKRYKTILIFILVFIAVFAFDQWVKSLTLLGLRWQSEYLDLTY
                     ALNTGVAFSMFSFLEHYLKYLHLALILALVIYLLWQKQFLREHLVAFGMMLGAGCSNL
                     LDRFIHGGVVDMFFWHKWFHFAIFNVADVMINISVALILIKEIFIKKEKNDRMD"
     gene            complement(18686..20023)
                     /locus_tag="R8X70_000922"
     CDS             complement(18686..20023)
                     /locus_tag="R8X70_000922"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEF2928709.1"
                     /translation="MKLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSVTNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYYDDKLIQSSKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALYPSNLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALFLKEQGK
                     LKSSVVATIMSNGALKEFLNGHGIELDTCNVGDKYVLEKLKVRGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLCKKKSASTILGQIKPYPQLLTNLKISEKKDLDKIKGLK
                     ELKQDLENKNINVLFRYSGTENLIRLLLEAKDAKILEKEMKNVVEFFKKALNG"
     gene            complement(20119..21144)
                     /locus_tag="R8X70_000923"
     CDS             complement(20119..21144)
                     /locus_tag="R8X70_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEF2928710.1"
                     /translation="MKVKSLLIASLVAFSSLNAQSLIEEAKNSGLVALPKDQKGVDEI
                     LKANGVKATEFTLDKVELGKKLYFEPRLSKSGIISCNTCHNLGLGGADGISAAVGHKW
                     TANPHHLNSPTVYNAVLNTTQFWDGRAGTLADQAKGPIESEAEMATPAKLAVEKIASL
                     PEYVKEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDNFLNGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDENGMVKTPTLRNVVETAP
                     YFHNGAIWKLTDAIKEMGSVQLGIQISDKEAKSIETFLKSLTGTKPAVVYPQLPVSTE
                     KTPKPEL"
BASE COUNT         7219 a         3621 c         2995 g         7345 t
ORIGIN      
        1 aaggaaaaat tatgattgta acgcctgaga aactttataa acaaagaaga gattttttta
       61 aacttggagc aggagcttta atcggctctt ctttaattgt ttccaaactt tctgctttaa
      121 attttataaa tgatacaaat gcaaataaac ttgaaattag caatgaagaa cttgcaacaa
      181 actatatcaa tttttatgaa ttttcaacgg ataaaagaaa ggcagtatct ttagcgcaaa
      241 attttaatac tcaaaattgg aaaatcgata taagcgggga aatagaaaag cctttcactc
      301 ttagcatgga ggatatttta aaatttcctt tagaagaaag aatttatcgt tttcgctgtg
      361 ttgaaacttg gtctatggta gtgccttggg taggttttga actacgccgt ttaatcgata
      421 tggcaaaacc aactagcgag gcaaaattca ttaaatttac cactcttttg gataaaaacc
      481 aattccccga tcaagatgct ttgtttccaa ctgttgagta tccttatgtg gaaggcttac
      541 gtatggatga ggctatgcat ccactcactc tacttgcagt gggtatgtat aaaaaggctt
      601 taaaaccaca aaatggagca ccaatccgcc ttgttgtacc ttggaaatat ggatttaaaa
      661 gtattaaatc catagttaaa atcgaatttg taaaagagca gcctattggc acttgggaaa
      721 aatatgctcc aaatgaatat ggcttttatg ccaatgtcaa ccctaatgta tcccatccta
      781 gatggtcgca agctaacgaa agggctttag gagacttttt taccaaacct actttaatgt
      841 ttaatggcta tgaaaaagaa gtagcaagtc tttatgcggg catggattta aaggcaaatt
      901 attaatgcgc actaaatact ttaaatttct tgcctatttt gcttttttag caagcttgat
      961 ttatggcttt tatcatatat taaaagcctt tgattttgtc aaagaggctt atatttatac
     1021 aggagttttt gctttatttt ttttaaattt aagccttttg ttttctttat gcaaatttaa
     1081 aaaaaccaaa agctatccta agctactagg aatatttgct gcattttggg catttttaca
     1141 ttttttaaat tattttatct ttgatagaaa tgcaaatttt ttaagacttt ttgatgatat
     1201 ctctcatcgt ttattggaag cgagtggttt ttttgctttt atcatcatct tttttatgtt
     1261 tttaagctct tttagatttt ttaaaagaat tgaaaagata agaaagttag gttatgtatg
     1321 cttggtttta gcaagttatc attatttttt aagccctaaa gttcctatgt tttgggaatg
     1381 gagtgctttg atgcttagcc ttgtttattt tatgatacgc tatttaaaat ttttcaaatt
     1441 taaaaaagct taaaaaccga caattttgct tttatcaaaa ctagaattta attctttttg
     1501 tatactctct ataaaatctt gcattttaaa tactccatct tcagtcacag ctaccttcaa
     1561 agcagtattt ttaacaacca ttaaaatttg cgctccactt aattcgtaat ttgctaaaag
     1621 attaacatca aatgcttttt caaaggatgc ttttctaggt aaaaatttct cccacatttt
     1681 aagcctatct ttaaaatcag gctttttaaa ttcaatctta taatcaaatc ttctcgaaaa
     1741 agcactgtct aaactttcta aaaagttagt tgtagcaatg ataacaccat taaaacgctc
     1801 aatttgctct aaaaaaatat tttgcatttg attatgcatc ttatcacttc cgctactgct
     1861 ttcaaccctt gtgcttaaaa actgatcagc ttcatttaaa agcaatatag gactttgttt
     1921 gcaagtttga actatgtttt tgtaagtatc aaaaattttc cttacatttt gttcgctctc
     1981 acccacccat ttacttaaaa ttttagaaca atcaaagcta agcactgttt ttttcatcga
     2041 ttttgccata gctagggctg acatcgtttt ccccgttcca gcaggtccat aaaaaataat
     2101 ctttgcttct atatttttat tgctctttat cccccaagaa tttagccttt caagtacttt
     2161 tttatcttgt tgttttaaga tattttccaa aagctcttta gtattttgag gcatgataat
     2221 atcatttata tctatacttg gctctataag ctcaaaaata tcttgctctt ttaaaacatt
     2281 ttcgatttta atttttttat tttgttttgg ctcgaaattt ataattcttt gtaaaatttc
     2341 atctgtaata aaaaaactct tagaaatatc accaaaggca tttaagtatt catcatattc
     2401 tattaaatta agaagaggag cattttcttg caataaactt ttatttttat gcttttctaa
     2461 atcattttca ctgactaaag aaagtaaaga attcatctct ctagatactg agttttcatt
     2521 gcttagtgta tattcttctt taagaagagc tagaaaaata atctgctctt tatactcaag
     2581 actatactct ttaaaaatat ctgctaaaat attataaaat ttacttttct taagtctttc
     2641 tttaatatgt ttttcataaa gcttgatttg tgctttaagt tcgtcactat atgtgcttga
     2701 acgtataaaa ctcaatctct catacagttc aactcgcata aattcatctt ttaaatattc
     2761 taaatactct ccataagctt cttttttatc caaatttaaa cgaggcttgg cttctaaaaa
     2821 ttctaaaaaa tactcactta aactcaactc gctttgcaat aaactaagaa ttaaattttg
     2881 gcttttattg ctttctatat ttttaaaaaa gccagaattt tgatttacaa aacctctttc
     2941 aataagcctt tttaaatcct ctaaagtatc taaatacgaa tatttttcac taccaaaaat
     3001 tcctgtcaat aaagtaaaag cattgataga agatatggaa atgacataat ttttacaaag
     3061 ttctctcaaa atcaaagctt cattctttga acactttaat tctttataaa tttgactttc
     3121 ttctatattt ttaagactta aaaattcctt tagcctgacc attttatttt ctaaattcct
     3181 ttatctcatt ctcgttaaaa tcaacacaaa tattttcatt caaataatga ttttcataag
     3241 gaagatagca caatcttaaa cccaaatttg taattaaaaa gttattatta aaaaaaactt
     3301 gctccatatc atcaaaacat tcatcgcaaa caagattcag tttttgatgc aagagttctt
     3361 taaatttcaa attatccaca tcataaagct catttaaact taaaaaaact tttttatcca
     3421 tatcgaaaac aaaattatta agctctaaaa ttgcgcgatt atcctcttca taaaaataat
     3481 accattcttc aaaactaagc tttccatctt ttagtacgat aggcttttgg cgaatttgtt
     3541 caaaactaac aatgtcgtta tacataggac gaaattgtct gatctcatct tgatgggcta
     3601 aaaaatcaag actgcgtttg attcttatat tgttttgctc tttgataagt tcaagagttg
     3661 ttgttcctag tttatttcct tgaatttttt tattatcaaa taccagttct ttagaagaag
     3721 aaattttata ttttttttct ccatcctccc atgaatttgc tgtttgaaac aaagctatct
     3781 cgatatttgt atcaagatcg ctcagtatta aaaaactaga actagtttga ttaacatccc
     3841 tatcaaaaat gggtacaaaa ggagcattat cataaactat agcaaaaacc tgcttatctt
     3901 ttaagtcata aaaataaatt tcacccttat aaatttgcgc acaaaccaaa ctcacaaaaa
     3961 agcataacaa cagccctatt ttcaaatttt atccttaaaa ttcattaaaa caatttttat
     4021 acgcgaaatt ctatcaacaa aactgatttt attatcacaa atttcataga aaatttcata
     4081 atttgcgctg tttaaattct gattgaatcc gcattgagtt ttttgcatat tcttaccatt
     4141 ccacaaaggc tttgcttcca aaatatcttt taatatatct tcataatagg catttttaaa
     4201 aaatttttga ttaaatacca ttttgctata gcacaccgaa tttaaacaaa tatcctctct
     4261 gattttaagt ttaaaaaaag cttgtccaag tttataaact tctaaattta aagccttatt
     4321 ttcttttttt aaaaagccaa aatcgttgat tttaatagtt ggtgtgctaa atacaacctt
     4381 cattttttgg ctagaataat cttgattttt taaagcacaa gcactaaaaa acaaaattaa
     4441 aaaaaagata aaaatttttc tcaacactct taacctattt taaattttta aaactaagat
     4501 ttaattctaa attaagctct ttaaccattt tcatcacagc ttgcaaatca tcaatttgct
     4561 ttgcaactac acgaatttca tctcctcgta tagaagagct tacttttagc ttactatctt
     4621 taatagcctt attgattttc ttagcatttt cactatcaat gctatcattg gcttttaaat
     4681 ttaaacgaaa catcgctcca ctttcgcgcg aaagctcttt aatagcactt gaattaatac
     4741 ctcttttgat aagttttgaa atcacaatat cttttagaac atcaagcttt gcctcacttg
     4801 aagaatgaag tttaaaaaca ccatctttct cgctaaattc aatttcacac ttaatacctt
     4861 ttaaatcata gcgagaatca agctcttttt ttgcttgctc aaaagcattt ttaagctctt
     4921 gtttatccaa agccgctgaa atatcaaaac tatgttcact tgccattttc tatccattct
     4981 tttaaattat cataaaccat agacatcaat ttttccaccg cttctttgct tgcccaagcc
     5041 acatgtggag taatgatgag attttcttta tttttgatat ttaagagagg atgatttttt
     5101 atcataggtt cactctctaa aacatcaagt cctacgcgta tatttttttc atccattatt
     5161 tttgccaaat cattctcatt aatgattccg cccctgccta cattgaccaa aatcgcatta
     5221 tcttttaaaa gttttaactt ctcataagta agcaaatttt tcgttttttc atttaaagga
     5281 gcgtgaatgc taacaatatc gcaagttctt aaaagctctt ccaaatttaa gcattcaaat
     5341 tcggcatttt gattgagtcc gcttgttgaa taataacaaa ttttagcccc aaaagcacta
     5401 gaaattttag ccacttcttt acctatactg cccagtccta taataccgtg cttttttcct
     5461 tccattgaat ttaaaattct accaaaatct gtaaagatag ggctatcgca ccatttgccc
     5521 tctttgctcc atttatcata gtaaggaata tgatttaaaa aagcaaaaat aaatgcaaaa
     5581 gtatgctgaa ctacgctcat agtagaatat ccagcagcat ttttaacgat aatgcccttt
     5641 tctttagcat attcaacatc gatattattt acacccgtag ctgtttctaa aataagcttt
     5701 aaattagggc aagcatccat aacttcttta tcaataacaa ctttatttgt cataaccaca
     5761 tccgcatctt ttaaacgctc tatggtttct tttctatctg ttaaagcata actttgaaat
     5821 tctccaaaat tcttaaaaat acttaaatca taatccccta aagttgccgc atctaaacaa
     5881 acaattttca tttctaatcc tttataatat gtcctacaaa tttagaataa ttatcaagca
     5941 caagtcctcc ttttctaaat cctaagccac acccttcata agcaaagaaa acacctgctt
     6001 gatagtattc gttttcacat gaattaaact ctacatattc ttgataaata gccttattat
     6061 tcccataagg acctacattc tcatgtaaaa ttttaccttc tttgattata ctaatatttg
     6121 ccccttctct accaaaaaca ggttttttca cataatcttt tccctctaaa ggaacatctc
     6181 gtgtttctaa aagtaatgga tgatttggga aaagttccca taaaattttt aaaattccct
     6241 tagattgaaa taaaagcgta taagcaggat ttaaaataat agctttttga tttctcatga
     6301 tttgcgttaa aagcatggct agttcgccct cttctatggc tatatcttcc caaggaacga
     6361 gcttaaacca atattcataa tttacaccct ctttaaaaat tccctcttcg ctaaattcta
     6421 cctcatctac aaaagaaaaa tctgtttcaa atcctgcttc atttgcaata tgagcaagta
     6481 attttgtagt gatttcttcc tctttacttc ctgccacact tgaaaaaaga attttccatc
     6541 cttgataata ctcttcaaag ccttgagtat cctcttcaag ggtaatcaat cttttaaaat
     6601 tatccatcaa gctttcataa atgctattaa attgcttact ttcatccatg ccattttgct
     6661 ttaaaatcgc ccattgtaaa atcgcacttt caaaaagagc agtgggggta tctgcattaa
     6721 attctataag ctttataggc ttgccatcaa gtccacccgc taaatcaaaa cggccatata
     6781 aatgccaatg aacctcattt tcccaactca ttttaatagc atcaacaaga ttaaaaggga
     6841 ttccaagctc atcaaaacga ttattatcta taacattttg tgctgcagct acaaacatat
     6901 cataaagctc attgactgcc tcataataag cattggcttc attttcactt acacatacta
     6961 atttatcact tatataatca cttccatctt catctgtatg ccaagaaaaa cctatatttt
     7021 ctaaataatc tttttgaagt ttgtctactt gtagtaattg cattatttat ccttaagagc
     7081 caaaagaaga actagaactt gtggctttag agcctccacc aaaaaaacct gattttgaag
     7141 cacttgaggc agagcctgct gtgcctgcct tgttaaaact attaacactc ctttgataag
     7201 cactttgatt tgaaaaagca ccgcgttgtt gattagcaaa attttgatta ttaaagagct
     7261 tagagcctat ccagctaccc aaaattgcac ccgcagcact tgcaagcaag gtctctccta
     7321 agcttaatcc tccactgctg atttgaccac cctctttagt caaatttgaa gttccattat
     7381 caatcttagc tgcttcttct ttgatgagcg catccatttc ctctttgctt agcactcttt
     7441 ctgtgccatt gatatctttt aaaacaactc tagtttcatc acttggaaat tgatctttga
     7501 ttttatattg acctggggcg atttcttcaa tgataacaaa ggctccttga gtgtttgctg
     7561 cttgatttaa agtatcacta ttatcattgc tacttccaca tcctaccaaa gctccacctg
     7621 caacagctgc aaggccgctt atcataccga tttgaataat ttttttaatt tttttcatag
     7681 tcttgatcct caaatgagat ttagaattta ttttttgata aaattctaac aaaaaataat
     7741 caattaaatc ttacaaaaat gaaaatattt taaagaaata aaatgcaatc ttaatatata
     7801 aaataaaact aggattttaa aaaaggtaat tttgcaaaga aatcttaaat taagaaaaaa
     7861 gccctttcgg gctttgggtt aaagtcttga ctcgtagcgt ctaagcatat aaagtctttt
     7921 aagcattttt ttgcgagctg aaattttttg ttttttacga atttcagtca taggctcaaa
     7981 aaatcttctc gctcttactt cagtaacaac tagatttcta tctacttgtt ttttgaactt
     8041 acgatacgct tcgtcaaaag actcgttagg atgtacctta attcctggca ctatcctcac
     8101 cacctttctg tgtaaatttt tgttgtgaat tatgattata gaatatttct tattaatcca
     8161 aacttagaaa gcatttaaaa attgttttag ttttttgggc tataatcgta attactaatt
     8221 ttttacgagg tttttcatgg aaaatcacat caccaactat actaaaaagc gttattttgt
     8281 atatctaatt gcaacaattg taatattttg tttacctttt attacaatta atggcaacca
     8341 tttcttttta ttgagctttg atcattctaa gttgaatcta ttttttattt cattttcaac
     8401 tcaagaatta tatcttatgc cttttttgct tatttttctt tttttattta tattttttat
     8461 aaccacttta ggaggaagag tttggtgtgc ttggagctgt cctcaaacta tttttagagt
     8521 gatttataga gatattatcc agactaaact tttaaaaatt cgtaaaaata ttaacaataa
     8581 acaaaaagaa tatgaaggat attattttaa aaaaatcata ggggtgattt tattttattt
     8641 catatcttta gtcgctgtaa gtaatttgct ttggtatttt gttccgcctg aagatttttt
     8701 tgcttatata caaaatccag gagaacactt acttttattg ggtgttttat tttgcgcaag
     8761 tttgttttta actttagata ttacctattt agtagaaaaa ttttgtattt atgtatgtcc
     8821 ttacgcaaga gttcaatctg taatgtttga ccgcgatacc atgcaagtta tttatgatga
     8881 aaaacgcggg ggagtgattt atgatggaca taccaaactt tacaaaaaac cgcctgaggg
     8941 tgaatgtata ggttgtgaag cctgtgtaag catttgtcct actcatatag atatacgcaa
     9001 gggtatgcaa cttgaatgta tcaattgttt agaatgtgct gatgcctgtt ctaaagtgca
     9061 aagcaaattt aatagaccaa gtttgattaa ttggaccagt gtaaaggcca tagaaacacg
     9121 caaaaaagta aattatctcc gctttagaac cattgcttat tttattgttc ttgtgattgc
     9181 tttaattgct ttaatgatta tgggtagtaa aaaagaaaat atgcttttaa atatcaatcg
     9241 tagcagtgaa ctttatcaaa tttcgcatac taataatggt ttagaaattt caaatgctta
     9301 tacttttttg tttcaaaata ctgattctaa agctcatgaa tattattttg aagctagcct
     9361 agaaggcatt gataatggca tagaaatcat tcgtccaagt aaagctttta cattaaaagc
     9421 aggagagcaa gctaagaaaa ttgttgtaat aaaagctact aaaaagctag cagataatga
     9481 tcaaaaagat gtgatttttc cacttcacat caaggcctat gccaaagata atgatgagat
     9541 tgtcattttt agagaaagta tttttgttta tcccaaaagc acaattttaa aggggtataa
     9601 tgaatccaaa taaaacacct tctaaaaaag ttttagcaag aagagaaaag attaaaaatg
     9661 ttgcttttga tctattttta accaagggct ttcaagaaac cagtttaagc gatattatca
     9721 aactatcggg cggttcgtat tctaatattt atgatagttt taatagtaaa gaaggtttat
     9781 tttttgaaat tttagatgat gtttgcaaaa aacattttga cctaatagcc tctcaaactc
     9841 aaactattaa agataaaaat ttaaaagaat ttttaacctc ttttggactt acttttgttg
     9901 atattttcaa tcaagtccaa accgtcgcct ttggcaaaat tattttctct caagtttatg
     9961 ataaacataa gcatgttgaa aattggattg aaaacaatca gaaaattttc tcctataaca
    10021 tacttataga actttttaaa aagcaagata gcagctatat ttcaaataat gcccaaaaac
    10081 ttgccatgct tttttgcgcc atgttaagag aaccttatca tagtttaaat gttttagccg
    10141 atactccttt aatgaacaaa caagaacaaa aagaacatgt ggaatttatt gtcaatatat
    10201 ttttaaaagg aattgaaaat aaaacctcaa tttaattaag taaatataaa aattattaac
    10261 caaatttgag ctataatatg tcttaaaaat tgtgtaataa atattacaat atatttaaat
    10321 taaaaatttt aaggcaaaaa tcatgaattt gtttcaaaaa aatacccttt tactcttaag
    10381 tgctttattt ttattttctg cttgtagcaa agaagaagca cctcaaaaac aaacaccccc
    10441 tcaatccgtt agtacaatga gcgctaaagc cgaaaattta ccgcttaact ttacttatcc
    10501 tgcaaaactt gttagtgatt atgatgttat catcaaacct caagtaagcg gtgttatcgt
    10561 ggagaaactt ttcaaagcgg gtgatttaat taaaaaagga caaacacttt tcattatcga
    10621 acaagataaa tttaaagcaa gtgtaaattc agcttatgga aaagctttaa tggctagagc
    10681 aaattttgac aatgccagca aagattataa ccgttcaaaa actctttata ataaaggagc
    10741 aatctctcaa aaagaatatg atagcgcctt agcaaatttt aacaacacaa aagcaaatct
    10801 caccagtgct agagcagact tagaaaatgc acgcattgat ttagcttata ctgaaattaa
    10861 agctcctttt gatggtattg taggagatgc tttgattaat ataggagatt atgttagctc
    10921 ctcttcaact gaactcgtaa gaattacaaa cctcaatcca atctatgctg atttttacat
    10981 ttcagatacg gataaactca atatcgttcg caatactcaa gatggaaaat gggatttaag
    11041 caatatctat gcagatttaa atcttaatgg agaagtagtt aaaggcaagc tttattttat
    11101 agattcagtc attgatgcaa atagcgggac agtaaaagct aaagcaattt ttgacaataa
    11161 tgactctact cttttaccag gtgcttttgc aacgattact tcaaatggtt ttattcaaaa
    11221 gaatggattt aaaattcctc aaattgcaat caagcaagac caaaatgagg tttatgtttt
    11281 tctcttaaaa gaaggcaagg ttgctaaagc tcctgtgcat ataagctatc aagataatga
    11341 atatgctatt attgataaag gactacaaaa tggagataaa atcattttgg ataactttaa
    11401 aaaaattaga ctaggtagcg aagttaaaga agttggagca caataatgtt ttctaaattt
    11461 tttatcgaaa gacctgtttt tgcttccgtt gtagccatta tcatctcttt ggctggagct
    11521 atcggacttg taaatttacc tatagagcag tatccatctt taacccctcc tacggttaaa
    11581 gtaagtgcaa cctacacggg tgcagatgct caaaccattg ccacaacagt tgcaaaccct
    11641 attgaagatg ccatcaatgg tgctgataat atgatatata tggattcaac ctcaagttcc
    11701 tcaggaacca tgaatttaac cgtgtatttt aatatcggca cagatcctga tcaagcaact
    11761 atagatgtta ataatagaat ttcagccgca accgcaaaaa tgcctgatga agtaaaaaaa
    11821 ctaggagtta cagttagaaa aacttcttct acaacacttg ctgctatttc tatgtattca
    11881 agcaatggct ctatgaacgc tgtagatgtt tataattaca taacacttaa tatcattgat
    11941 gaactaaaaa gagttcctgg tgttggagac gctaatgcta taggaaaccg taattattcc
    12001 ctaaggattt ggttaaaacc tgatcaatta aataaatttg gcataacagc tacggatatc
    12061 attgcagctg taaatgatca aaataaccaa tatgcaacag gtaaaatcgg tgaagagcct
    12121 gtaacacaaa aatcgcctta tgtttattct atcactatgc aaggaagatt acaaagcccg
    12181 agtgaatttg aaaatatcat tttaagagca aacaacgatg gatctttttt aagacttaaa
    12241 gatgtagcag atgttgaaat aggatctcaa cagtacagtt cgcaaggacg cttaaacggt
    12301 aatgatgcag ttcctataat aatcaacctc caatcaggag caaatgcact caatacagca
    12361 aaacttgtag aagctaaaat gcaagaactt tcaaagagct ttcctgaggg tttagaatat
    12421 aagattcctt atgatacgac taaatttgtt atcgagtcta ttaaagaagt tataaaaacc
    12481 tttgttgaag cgttgatttt ggttattatt gttatgtata tgttcttaaa gaacttccgc
    12541 tcgacactca tacctatgat cgctgttcct gtttcattgc taggaacttt tgcaggactt
    12601 tatttgttag gatttagtat aaatcttttg acattatttg ccctaatact agccataggt
    12661 atagtcgtag atgatgctat tattgtggtt gaaaatatag ataggatttt acacgaagat
    12721 gaaaagatca gcgttaaaga tgctgccatc caagcaatgc aagaagtaag ttcacctgta
    12781 atttcaattg ttcttgtgct ttgtgctgtt tttatacctg tgtcttttat ttcaggcttt
    12841 gtgggagaaa ttcaaaaaca atttgcgctc actttggcta tatctgtaac catatcaggt
    12901 tttgtagctc ttactttaac accttcttta tgtgcactct ttttaagacg gaatgaaaca
    12961 gaacctttta aatttgttaa aaaatttaat gatttttttg attggagtac ttctgtgttt
    13021 agttctggag tagcttacat gctaaaaaga actattcgtt ttgttattgt tttttgcatt
    13081 atgcttggtg caatttttta tctttataaa caagttcctg gctctttggt tcctgaagaa
    13141 gatcaaggtt taatgatagg tattgtaaac cttccttcgg cttcagctct acatagaacg
    13201 atctcggaag ttgactctat gagtcaagaa attctaaaaa ccaatggcgt aaaagatgct
    13261 atggctatga taggttttga tttatttaca agctcactta aagaaaatgc cgctgcaatg
    13321 tttataggct tgaaagattg gaaagataga aatgtaagcg ctgatgaaat catcatggag
    13381 cttaataaaa aatttgcccc tgatcgcaat gctgcaagtg tatttatagg attgcctcct
    13441 atacctgggc taagtatcac gggtggtttt gaaatgtatg tgcaaaataa aagcggaaaa
    13501 agctacgatc aaattcaaga agatgtaaat aaacttgtag cagcagccaa tcaaagagag
    13561 gaattatatg gggttcgaac tactcttgat acgagctttc ctcaatataa actcatcatt
    13621 gatagagata aactaaagca ttttaattta aatatgcaag atgttttcag tacaatgaat
    13681 gcaaccattg gaacatatta tgttaatgat tttactatgc ttggtaaaaa ttttcaagtc
    13741 aatattcgcg caaaaggaga ttttataaat acccaaaatg cattgaaaaa tatttttgtg
    13801 cgctcaaatg atggaaaaat gataccgctt gactctttct taactctaca aagaagttca
    13861 ggaccagatg atgtaaaacg ttttaatatt ttcccagcag cacaaataca aggacaacct
    13921 gctccaggat acacttcagg acaagccata gaagcgattt cccaagtagc acaagaaact
    13981 ttaagtgatg attactctat agcttggagt ggttcagcct atcaagaagt ttcaagcaag
    14041 ggaacaggga gctatgcctt tgctttgggt atggtgtttg tattcttaat cctagcagca
    14101 caatatgaaa gatggcttat acctttagct gttgttacag ctgtaccttt tgccgttttt
    14161 ggttcgtttt tacttgtata cttaagagga tttactaatg atatatattt tcaaaccgga
    14221 ctcttacttt taattggact ttcagctaag aatgctattt tgatcgttga atttgctatg
    14281 gaagaacgct ttaagaaagg taagaaaata tttgatgcag ctatcgaagc tgcaaaactt
    14341 cgctttaggc cgatagttat gacttcttta gcttttactt ttggggtttt accaatgatt
    14401 tttgcaactg gagcaggaag tgcttcaaga cattctttag ggacagggct tattggtgga
    14461 atgatagctg cttctacttt agctatattc tttgtacctt tatttttcta tcttttagaa
    14521 aatttcaacg aatggctaga taagaaaagg ggtaaagttc atgaataaaa taatttcaat
    14581 aaatgttata gcaagcttaa gcctttttat ttcagcttgt tctttaagtc caaatttaaa
    14641 tatcccagaa gcaaattata gtcttgataa taaactgggc gccctatctt gggaaaaaga
    14701 aaacaatcat actctttcta aagaatggtg gaaagaattt gatgatgaga aattaaatca
    14761 cgtagttgat ttagctcttc agaacaataa tgatttaaaa cttgctttta ttcatatgga
    14821 acaagctgct gcccaattag gcatagattt tagtgattta ttaccaaaat tagatggtag
    14881 cgctagtgca aatcgtgcaa aaacacctac aaatgctcca agcaaccgca ctgggggagt
    14941 aagctatggc aatgatttta aaatgggact ggatttaagc tatgaaattg atctttgggg
    15001 aagataccgc gatacttatc gcgcttcaag atcaggcttt aaagccagtc agtatgatta
    15061 tgaagctgcg agactttcta tagtttcaag cgtggttcag acttatttta attttgtaaa
    15121 tgcaaatgaa aatgaaaaag ctttaaaaga tgcttatgaa tctgcacaag aaatttatca
    15181 aattaattat gaaaaatttc aagtaggagc agtaggagaa tacgaaatcg cgcaatcaag
    15241 agcaaattta gaaagtactg ctttacaata caatgaagca aaattaaata aagaaaacta
    15301 tcttaaagct ttaaaaattc taacttcaaa tgatttaaac gatattcttt atcaagatca
    15361 agcttatcag gtttttaaac tcaaagattt tgatataccg agcggaattt caagcactat
    15421 actcttgcag cgtcctgata ttggatcttc tttagaaaaa cttactcaac aaaattatct
    15481 agtaggagta gctcgcacag ctttcttgcc taatctttct ttaacaggct tattaggatt
    15541 tgaaagcggg gatttaaata cacttgtgga agcgggctct aggacttgga gtataggtgg
    15601 gaatttcgta atgccaattt tccactgggg agaaatttat caaaatgtga atttagcaaa
    15661 actcaacaaa gatgaagctt ttgtaaatta tcaaaatacc ttagttgcag cttttggaga
    15721 aattcgctat gctttaattg caagaaagac tattcgcttg caatacaata acgcacaagc
    15781 aaacgaatta tcctacaaaa gaatttatga aataagtaaa gagcgttatg atgtgggcga
    15841 aatgtctttg caagactatc tacaagcgcg tcaagactgg ttaaatgcta cagttgcttt
    15901 taataatacc aaatattctt atgctaattc tatagtcaat gttatcaaag cttttggtgg
    15961 cggatttgaa caaggtgaaa atatcagcaa aaatatagaa gaagaatcaa aaactttaga
    16021 tatgtccttt agagagtaaa acttactctc taaattagag cttattttta aaaatctcta
    16081 tttaaatcag aatcactaac ctcatatgct ttataaatag ctggtaataa ttttctcatc
    16141 gcataatcta aatgataaaa ttgcttataa acttcctctg catttaagtc cttagcattg
    16201 ctaaagtcaa atacttcagt attgccaact tttgaaatat tcttatcaaa ataagaataa
    16261 aattccgccc tttgtttaaa caatgcgttt aaattttcta ctacttttgt tttatccata
    16321 agccatcctt tctaattatt ttgaaagtta tagcattttt ttgctaaaaa taaaaaaatt
    16381 tacacttgat ttaataaaaa attgataaag ttatattata ttttctactt taaggtgggt
    16441 taatgaattt atttcaaaat ttggctttaa aatattctca tgctatgatg gaaaaatctc
    16501 tacataaaag tttcaatgtc gaacttttga aaaatcctca agaaaaacaa gccaaaaaag
    16561 ataaaactta tatgctttat gctcacatac ccttttgtca taccttttgt ccttattgta
    16621 gttttcataa atactattat gatgaggaat tggctaaaat ttattttgaa aatttaagaa
    16681 aagagcttat gcttataaaa gataaaggtt ttgattttag ctcaatgtat gtaggaggcg
    16741 gaacaacatt gattaatgaa aatgaattac taaaaactct agaactttgt aaaaaacttt
    16801 tcaatatcaa agaaatttct tgcgaaagcg atcctaatca tataattcct gaaaaactct
    16861 ctatgtttaa aggtataatc gatcgtttaa gctgtggaat tcaaagtttt gatgatgaaa
    16921 ttttaaaaaa aatagcaaga tataataaat ttggttcttc taaacaatta caagaaaaaa
    16981 tttcaaaagc tttgggaatt ttgccaattt ttagccttga tttaattttt aatttcccct
    17041 cacaaacaga agaacagctt ttaaatgatt taaaaatcgc taaaaattta gctcctcaac
    17101 aaatcacaac ctatccttta atgaaatcca atctaaccaa agacaatata gccaaaagtc
    17161 ttggtgttga aactaaagat aatgaattta aatactatca aatgatacga aattttttca
    17221 aggattatca gcaaaataat ggctggagtt tttctttaga aaaaaatcaa ctcaatgatg
    17281 aatatgtaag ctctcaccat gaatatttag gcgttggaag tggagctttt agctttttag
    17341 atggggagtt gcttatcaat gcttttgatt taaatgatta tgcaaagatg atacaagaaa
    17401 aacaaaatgc caatatagca aaagcgagtt ttacacgaaa agagattatc aaatacatat
    17461 ttttaactga aatgtttgca gggaaaatac aaattgataa attcaatcaa acccttaatt
    17521 gtgatcttga aaaagaactc ttcaaagaac ttttaggact taaaataagc aatgctatca
    17581 aaaaagaaaa tggcgcctta atcacaagtg aatttggaca gtatctcttt gtggtcttaa
    17641 tgaaggattt ttacacagga atggatcttg tgcgcgcggt atttagagat agtaagcgct
    17701 taaaaaataa agattttatc aatataatga aagaaaatat aagttctatt taatttcttt
    17761 tttttgaaat taaatagaaa tgaaaattaa aacggacgaa tcaccatcat taaagcaatg
    17821 ataataaaca ttaaagtagg aaattcatta taaattctaa aatatcttcc gctttttgta
    17881 gaagtatcat tcgccaaagc ttttaagcaa aaataattat gtatatgaaa aatgattaaa
    17941 agcgtagcac aggtaagttt tgcatgcata aagccagaac ccaccatcaa aacttcttta
    18001 tgagcatgta acattaaact cccactaata accgttgcta tcatcgctgg attttgtata
    18061 ccaaaataaa gtcttctttc ttgtatcttt acaacatcaa caaaaccttt attgttttta
    18121 ttttctgcat gatatacaaa caaacgaggc aaataaaaaa gtcctgccat ccaagaaaca
    18181 aatgctaaat aatgcaccca tttaatccaa gaataatact cattaatcca ttctgtcatt
    18241 tttttccttt tttataaaaa tttcttttat taagattaag gcaacgctta tgtttatcat
    18301 cacatctgct acattaaaaa tagcaaaatg aaaccattta tgccaaaaaa acatatccac
    18361 tactcccccg tgtataaaac ggtcaagcaa attcgaacac cccgccccta gcatcatacc
    18421 aaaagccact aaatgttctc ttaagaattg tttttgccac aaaaggtata taacaagcgc
    18481 caatatcaag gctaaatgta aatattttaa ataatgctct aaaaaactaa acatagaaaa
    18541 agcaactcct gtgtttagag cataagttaa atccaaatac tcactttgcc aacgcaaacc
    18601 caataaagtt aaagatttta cccactgatc aaaagcaaaa actgcaataa aaactaaaat
    18661 gaagatcaag atagttttat atcttttaac catttaatgc tttcttgaaa aattcaacta
    18721 catttttcat ttctttttct aaaattttag catctttagc ttctagtaaa agtctgatca
    18781 aattttctgt tccagaatag cgaaataaca cattaatatt tttattttcc aaatcttgtt
    18841 ttaattcctt caaaccttta attttatcca aatctttttt ttctgaaatt ttaagattgg
    18901 ttaaaagttg aggataaggt ttgatttgtc ctaaaatagt acttgcggac tttttcttgc
    18961 aaagcatcaa agcactaaat tgcaaagctg ctataagacc atcgcctgtt tttgcataat
    19021 cgctaaaaat aatatgccca ctttgctctc cgccaaagtt tccaccccta acttttaatt
    19081 tctcaagtac atatttatcg cctacattac aagtatcgag ctctatacca tgtccattta
    19141 aaaattcttt caaagcccca ttgctcatga tagtagctac cacactggat tttaatttgc
    19201 cctgttcttt taagaaaaga gctaaaactc caagcaggct atctccattt gctacttcac
    19261 ccttttcatc taccactacc aaacgatccg catctccatc aaaagcaaaa ccaacatctg
    19321 cacgcaaacg ctttacttca gcggctaaat ttgaaggata caaggctcca caattttcat
    19381 tgatattaag cccattaggt ttatcactca tcactataac ttcagctccc agttctttaa
    19441 aaacagtcgg agctacctta taagccgctc catgagctac atctaaaact acacgcaatg
    19501 attttagagt taaatcctta gggaaggaat tcttaataga aacaatatat cttcctataa
    19561 catcatcaat tcttttagcc tggccaattt tctccatatc aactttagag ctttggataa
    19621 gcttatcatc ataataaatt tcttcaatct ttttttctat atcttcgcta agcttattcc
    19681 catgtgcatc aaaaaattta atcccgttat cataataagg attgtgtgaa gctgaaatca
    19741 taatacccgc atcacaacgc atatcttcag ttaaaaatgc aattgcaggt gttggcatag
    19801 ggcctatttg tatcacatta tatcctatag aagtaagacc tgaaacaata gcattttcta
    19861 tcatataacc acttcttctt gtatctttac ctactaaaat attatttgta acactcttat
    19921 ctttaaaata aattccagcg gccatagcaa gacgcatagc taaaaaacta tctaaaaatt
    19981 cgcccgcttt tccacgaacg ccatctgtcc caaaaagttt catcattaaa cctttctcaa
    20041 tgaaattcta gaaattatag caaagctagg ataaagaaat ttaaacaaac cctaaaaaga
    20101 tttagggttt gataagcctt atagttcagg ctttggagtt ttttctgtag aaacagggag
    20161 ttgaggataa accactgctg gtttagttcc agttaaagat tttaagaaag tttctatact
    20221 ttttgcctct ttatcagaaa tttgaatgcc aagttgcaca ctacccattt ctttaattgc
    20281 atcggttaat ttccatatcg caccattgtg gaaatatgga gctgtctcaa ctacatttct
    20341 taaagttgga gttttaacca tgccattttc atctccttta aaatcaccca aatttgcaaa
    20401 tttatactta cctgcaacct caaatgcttg catatttcca cctaaattca caccattatg
    20461 acaagctaca caacctttgt caatgaaaag ttttaaacct ttttgctcct ctttagttaa
    20521 agctttttca tctccattta agaaattatc aaagcgagat ggagtgatta aagttctttc
    20581 aaaatttgct atcgcatcag caatattgtc aaaattcaca ccgcttttgc cataaatttt
    20641 cttaaattct ttaacatatt caggtaaaga agcgattttt tctacagcta attttgctgg
    20701 agttgccatt tcagcttcag attcaatagg tcctttggcc tgatccgcta aagttcctgc
    20761 acgcccatcc caaaattgag tcgtgtttaa aacagcatta tatacagttg gggaatttaa
    20821 atgatgaggg tttgcagtcc atttatgtcc cactgccgca ctaataccat cagctccacc
    20881 aagtcctaga ttgtgacagg tattacatga aataattcca ctttttgaaa ggcgaggctc
    20941 aaaataaagt tttttaccaa gctcaacttt atcaagagta aattcagtag cctttactcc
    21001 atttgctttc aaaatctcat ccacgccttt ttgatctttt ggtaaggcaa ctaaacctga
    21061 atttttagcc tcttctataa gactttgagc atttaaactt gaaaaagcaa ctaatgatgc
    21121 aatcaataac gatttgactt tcatttacaa actcctttac ttttagatat aaacttaaac
//
LOCUS       DAQUWA010000029        21144 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.029, whole genome shotgun sequence.
ACCESSION   DAQUWA010000029 DAQUWA010000000
VERSION     DAQUWA010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21144
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.029"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(43..1812)
                     /gene="pglF"
                     /locus_tag="R8X70_000924"
     CDS             complement(43..1812)
                     /gene="pglF"
                     /locus_tag="R8X70_000924"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_075460812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HEF2928711.1"
                     /translation="MDFYKSKRLIFFLCFDAFLFILSIFLAFSLRFSGEIPSIFYEGM
                     IKAGLILLVLKIAFLFIFRIYKVAWRFFSLSEARKIFFALVLAEICFLLIFYFYDDFF
                     NPFPRSVIGIDLILSYMFVGTLRISKRMLIDFKPSRAKEETPCIVVGATSKALHLLKG
                     AKEGSLGLFPVGVVDARRELIGTYCDKFIVEDKSKIKDYVNEGVKTAIIALKLDQAEL
                     KALFEELIAYGISDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVASFLKDKVVLVS
                     GAGGTIGSELCKQCIKFGAKHLIMLDHSEFNLYKINEDLSLYKEKITPVLLSILDEQS
                     LDEIIKEYKPELILHAAAYKHVPLCEQNPHSAVLNNIVGTKTLCDVAKKNKVKKFVMI
                     STDKAVRPTNIMGCTKRVCELYTLNSSDENFEVSCVRFGNVLGSSGSVIPKFKAQIAN
                     NEPLTLTHPDIVRYFMLVSEAVQLVLQAGAIAKGGELFVLDMGEPVKIMDLAKKMLIL
                     SNREDLEIKITGLRRGEKLFEELLIDENDAKTEYESIFVAKNEKMDIQILNDYIKKLQ
                     DCQNIAEILKEIVPEFNHNKDGN"
     gene            complement(1815..2975)
                     /gene="pglE"
                     /locus_tag="R8X70_000925"
     CDS             complement(1815..2975)
                     /gene="pglE"
                     /locus_tag="R8X70_000925"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HEF2928712.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEESVKDY
                     AQCENALALNSATAALHLALRVAGVEQDDIVLASSFTFIASVAPICYLKAKPVFIDCD
                     ETFNIDIDLLKLAIKESEKKPKALILTHLYGNAAKMDEIVQICEKENIILIEDAAEAL
                     GSFYKGRALGTFGEFGAYSYNGNKIITTSGGGMLIGKDKQKIERARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGDSFVFLDELENS
                     RSNRWLSTALIDFDKNEMNAYQKCIEISQKDLILHPKISKLITDLQKEQIETRPLWKA
                     MHTQEVFKGAKAYVNGNSEFFFKKGICLPSGTAMSKDNVREISELIIKSVKA"
     gene            complement(3130..3717)
                     /gene="pglD"
                     /locus_tag="R8X70_000926"
     CDS             complement(3130..3717)
                     /gene="pglD"
                     /locus_tag="R8X70_000926"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HEF2928713.1"
                     /translation="MARTEKIYIYGASGHGLVCADVATNLGYKECIFLDDFKGKKFES
                     SLPKYDIFIAIGNNEIRKKLFNQISDSGFKIVNLIHKSAIISQSADIAEDAGILIMPY
                     VVVNAKAKIKKGVILNTSSVIEHECEVGEFSHISVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGATLVKSQSEKGVFVGVPAKRM"
     gene            complement(3704..4306)
                     /gene="pglC"
                     /locus_tag="R8X70_000927"
     CDS             complement(3704..4306)
                     /gene="pglC"
                     /locus_tag="R8X70_000927"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HEF2928714.1"
                     /translation="MYEKWIKRIFDFVLALFLLVLFSPLILITALLLKITQGSVIFTQ
                     NRPGLNEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLK
                     GDMSFVGPRPLLVEYLPLYNEEQKLRHKVRPGITGWAQVNGRNTISWQKKFELDVYYV
                     KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN"
     gene            complement(4299..5429)
                     /gene="pglA"
                     /locus_tag="R8X70_000928"
     CDS             complement(4299..5429)
                     /gene="pglA"
                     /locus_tag="R8X70_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HEF2928715.1"
                     /translation="MRIGFLTHAGASIYHFRLPIIKALIARGDEVFVIVPQDEYTEKL
                     KALNLNIVVYELSRASLNPLIVFKNFLHLKNVLKNLNLDLLQSGAHKSNTFGLIAAKY
                     AKIPYKIGLVEGLGSFYIDKGFKANLVRFVINTLYKLSFKIADSFIFVNQANADFMRN
                     LGLKENKICVIKSVGINLKKFFPMRVEQEAKKAFWQNLKIDEKPIVLMIARALWHKGV
                     KEFYESAEYLKDRANFVLVGGRDDNPSCASLEFLNSGKVFYLGARSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKVIVVSDCEGCVEAISNAYDGLWAKTKDSKDLIEKIQV
                     LLEDKSLRINLGKNAAKDALQYDENVIAQRYLELYDRVIKNV"
     gene            complement(5441..7585)
                     /locus_tag="R8X70_000929"
     CDS             complement(5441..7585)
                     /locus_tag="R8X70_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
                     /protein_id="HEF2928716.1"
                     /translation="MLKKEYFKNPTFILLAFIILAYVFSVLCRFYWIFWASEFNEYFF
                     NNELMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSTLTYWFYKITPFSLESIFI
                     YISTFLSSLVVIPLILIANEYKCPLMGFVAALLASIANSYYNRTMSGYYDTDMLVIVL
                     AMMIVFFMIRLILKKDLLSLIALPLFVGIYLWWYPSSYTLNVALLGLFFIYTLVFHIK
                     EKTLYMAIILASITLSNIAWFYQSAIIVILFSLFVLQNKRFSFALLGILGLATLVFLI
                     LSGGIDPILYQLKFYIFRSDESANLAQGFMYFNVNQTIQEVESIDLSIFMQRISGSEL
                     VFFVSLIGFIFLVRKHKSMILALPMLALGFLALKSGLRFTIYAVPVLALGFGFLMSLL
                     QERKQKNNNTYWWANIGVFIFTFLSLIPMFYHINNYKAPTVFSQNEATKLDELKKIAQ
                     REDYVVTWWDYGYPIRYYSDVKTLADGGKHLGKDNFFPSFVLSKDQVAAANMARLSVE
                     YTEKSFYAPLNDILKNDLLQAMMKDYNQNNVDLFLASLSKPDFKINTPKTRDVYIYMP
                     ARMSLIFSTVASFSFVDLETGEINKPFTFSAAYPLDVKNGEIYLSNGIALSDDFRSFK
                     INNSTISVNSIIEINSIKQGEYKITPIDDTAQFYIFYLKDSTIPYAQFILMDKTMFNS
                     AYVQMFFLGNYDKNLYDLVINARDAKVFKLKI"
     gene            complement(7589..8686)
                     /locus_tag="R8X70_000930"
     CDS             complement(7589..8686)
                     /locus_tag="R8X70_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEF2928717.1"
                     /translation="MQKLAIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EISECKIHFLERSKPSENPILKFLKLPFLALKYKKLCQKLNIDTEFVFLNRPNYIALM
                     AKIFGNKTRLVINECTTPSVMYAKNNFNSLANKLLITLLYPRADLILPNSKGNLEDLL
                     CNFKIDKAKCEILYNAIDLEKIEQKALEDISLKDKFILSVGRLDEGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLALIKDLNLEDKVLLLGFDNNPYKYMSKCEFFAFASVFE
                     GFSNVLIESLACGCAVVCTDHRSGARELFGDDEFGLLVEVNNENSMFMGLKTMLEDEN
                     LRKAYKKKAKDRALDFDKAKIAHNALKYLLG"
     gene            complement(8674..9603)
                     /locus_tag="R8X70_000931"
     CDS             complement(8674..9603)
                     /locus_tag="R8X70_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEF2928718.1"
                     /translation="MPKLSVIVPTFNRSSLLQKAVQSILNQDFKDLEIIISDDNSSDD
                     TKSVVENLQKSDKRIKYFLNQNYKQGPNGNKNNGLDKASGEFITFLDDDDELLPYALG
                     VLMQKVDEGYSHVFGNCLIEKEGILSDEFSGRGLQKEDEISKKDFLMQRFSGEFFSVF
                     KASLLKNKRFNEEFYGNEATLWVNLYEEKSFYIHKAFRIYRVFRKDSVTLGASKNAHR
                     VHLGYLELAKILENELKASGDDDYRKTCASYYKMAAYYAKLSANYKALYHCLFKSLSI
                     KINAPALILLTLSIIPSKMIEKLSKIRVALCKN"
     gene            complement(9596..10672)
                     /locus_tag="R8X70_000932"
     CDS             complement(9596..10672)
                     /locus_tag="R8X70_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004291478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEF2928719.1"
                     /translation="MKITFIIATLNSGGAERVLATLANALCTQHEVSIIKFHVGDSFY
                     KLEENIKLITLEQFRFDTLYHKIASRFKKYLALRKALKENESDVFISFLDTTNIACIF
                     AKIGLKTPLIISEHSNEAYLKSKIWRFLRRLSYPFCDALTVLGSSDKIYYEKFVKRVK
                     LLPNPCHFSTEISLNEYFEKENLVLFIGRLDQNKNPQMFLKAIAHLDKKLQEDYEFVV
                     AGDGELRQELEYKAKSLGIRVKFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESLY
                     FEVCRISTSYYNGAKDLINDNKDGFLVGCDDEIALARKLELVLKDEQLRKNIVINAKK
                     RCEDFEISHIKKQWLELIDEVKNA"
     gene            complement(10669..12369)
                     /locus_tag="R8X70_000933"
     CDS             complement(10669..12369)
                     /locus_tag="R8X70_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEF2928720.1"
                     /translation="MLKKIFFILSKEDKKFLFSLLLFSVFISFIESFAISLVMPFITL
                     ASDFSYFDRNKYLIQLKDYLALPVFEIIVYFGVVLIVFYVLRALLNSYYFHLLARFSK
                     GRYHAIAYKVFAKFLNTDYENFTQKNQSEILKSITGEVYNLSTMISSFLLMMSEIFVV
                     LLLYTLMLLVNYKITLFLSLFMIINAFILIKVLSPIVKKAGLKREEAMKNFFEILNTN
                     LNNFKLIKLKTKEDGVLNLFKTQSEIFAKANITNESVSAMPRIYLEGVGFCVLVFIVV
                     FLVFKNQSDISGILATISIFVLALYRLMPSANRIITSYHDLLYYRSSLDIIYQILKQK
                     EESLGEEKIDFDKELRLENLSFGYKDKKNLFTCLNLSIKKGEKIAFIGESGCGKSTLV
                     DIIIGLLSPREGRVLVDKNELNMKNVKNYRQKIGYIPQNIYLFNDSIAKNISFGDEVD
                     EEKLQRVIKQANLEHFVKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLDPEILVL
                     DEATSALDTESEARIMDEIYKISKDKTMIIIAHRLSTITRCDSIYRLEHGKLFKEDKK
                     "
     gene            complement(12363..13349)
                     /gene="galE"
                     /locus_tag="R8X70_000934"
     CDS             complement(12363..13349)
                     /gene="galE"
                     /locus_tag="R8X70_000934"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEF2928721.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTNHEICVLDNLSKGSKIAIEDL
                     QNIREFKFFEQDLSDFEGVKALFEREKFDAVVHFAASIEVFESMQNPLKYYMNNTINT
                     TNLIQTCIQTGVGKFIFSSTAATYGEPTTPVVSENSPLAPINPYGRSKLMSEEVLRDA
                     NMAHPEFKYCILRYFNVAGACMDYKLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLAALDYLENNESNIFNVGYGHGFSVKEVIDAMKRVSG
                     VDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKFDDLDLICKSAFDWEKQC"
     gene            complement(13406..14197)
                     /locus_tag="R8X70_000935"
     CDS             complement(13406..14197)
                     /locus_tag="R8X70_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEF2928722.1"
                     /translation="MMKNEGYICIFDCESIPDTDLIRKTLAFEGEDLEVSLKALEWQK
                     EQSGSEFLPLPYHKIVSICAVISDHYGKFIKVNKIDGENEKEMIHNFFAFIEKYEPKL
                     VSFNGKNYDMPLLVLRALKYNIKAANYLDTQSDKWNNYKTRFSELKHCDLFESFGSTR
                     GLKLDTICAMADLPGKYDVHGDEVMKLYYEDKIEKIHEYCESDVLNTYMLFLKYELIK
                     GNVSDEDYAYFLNSMSEFLKAKKANRAYVEIFCKACENEISKMKI"
     gene            14262..15290
                     /gene="waaC"
                     /locus_tag="R8X70_000936"
     CDS             14262..15290
                     /gene="waaC"
                     /locus_tag="R8X70_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEF2928723.1"
                     /translation="MKIAIIRLSALGDIIQSAVVLQFIKKFKKDIEIHWFVDEKFEGI
                     LKNHPLIDKLYALPLKDKKIIQSLKILLEARKNNYNAVMDLQGLVKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLNIDYNENVFVRYLGLTSFMLNKYFDPKDLAFKEDVFS
                     VDEKLKQLLSEKMQLTKNKKNILIHVGSSEENKIYPKTKLALLCKLIIKEFPEIKIFL
                     GWGNLKEYEFAKEVIELGAISQDNIEIAPKFSLEELIVFTKSMDLIIGNDSGPTHLAF
                     ALNRPSITIFGATPSYRNAFKTNINKIIDTGKKITNAKHLDKSDFCISTIEEEDILKL
                     VKELFGDE"
     gene            15283..16170
                     /locus_tag="R8X70_000937"
     CDS             15283..16170
                     /locus_tag="R8X70_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl acyltransferase"
                     /protein_id="HEF2928724.1"
                     /translation="MNKDYLYLSAYYILKFLVYTMPHFILNFLAFCVSKIVFKLDKKH
                     RKIIDINLKLCFPYKDENERKELAFKIYNNFAKFGLDCIKNQNTSKEKILAKVVFDNE
                     EILTQALKEQKGVIFATAHYGNWELLSLAYAAKFGAISIVGKQLKSQRMTELLAKNRT
                     QFDIELIDKKGGLRKMLSAIKNKRALGILTDQNCTDNEGVRLDFFGKRVNYQAGASIL
                     AKKTGALIIPAYIYQGEDEKFHIKFFKTLDPLNSSLEELTKYQAKTCEEMIQFKPDEY
                     FFFHRRFVSYDEKLYKGIK"
     gene            16167..17714
                     /locus_tag="R8X70_000938"
     CDS             16167..17714
                     /locus_tag="R8X70_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEF2928725.1"
                     /translation="MNLEKISVIIIVKNAQNTLCECLNSLKEFGEIILLNNESTDDTL
                     KIAKEFQKEFAHLYIYESKFIGFGALKNLALSHAKNEWILNIDADEILENEAKEELKK
                     LEFREQNILALPRKNLYKGEWIKACGWWPDHVLRVFNKKHTKFNENLVHESLILHTNT
                     QKVYLKNGLKHFAFESIDDLLDKLQKYSKLWALQNLHKESGICKALVRGFWTFFRNYV
                     LKKGIFYGYEGFIISVCNGLGAFFKYMKLYELKKQKPKTCALIITTYNQPKRLALVLD
                     SVKNLDPLPNEVLIADDGSKEDTAKLIQEYQKNFPCVLKHIWQEDKGFRAAASRNKAI
                     NASNSEYIILIDGDMILEKSFIADHLNFARLKTILQGSRTILNENESKEILKNNDFKL
                     AFNKKKLKNKKNDFLACLIYNFSKTNKNFFKKSYLVKGSKTCNMSFYKSDFEAIEGFN
                     EKFVGWGREDSEFVARFLFNNGLFRRLKFNALAYHIYHEENSKNMLESNHQIYLDTIK
                     NKKATWR"
     gene            17716..18873
                     /locus_tag="R8X70_000939"
     CDS             17716..18873
                     /locus_tag="R8X70_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEF2928726.1"
                     /translation="MKTVGIVIPIYNVEKYLRECLESVINQTYVNLEIILVNDGSTDE
                     NSLNIAKEYALKDKRITLFDKENGGLSSARNTGIEFFYKEYETHFSNEIDGFYTFTVA
                     NENPQNVYKIYKNKNTFIEKNLEAPDIDYLIFLDSDNSWELNCIEECVKRMQDIDILW
                     FDHLCVYEKGIEDKGQKTRMQIFSYKEECIINPKDYAKRALEVGSRDISFSWGGMIDF
                     NFLKKIKLKFVNYIINEDIHFGMILFASANKIYVLPKRLYKCLLRSNSISNHDKKVTK
                     ANISHYFKNIYEAFDEDAKSAKEYLRLASRVITVLKLIDFFQGKKENENSKAIKEIFL
                     PFYAKKALKFKKVNKDPLNLKNELDKIKPFVKNILPYDAWKILQKIKNIFS"
     gene            complement(18866..19846)
                     /locus_tag="R8X70_000940"
     CDS             complement(18866..19846)
                     /locus_tag="R8X70_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide synthesis protein"
                     /protein_id="HEF2928727.1"
                     /translation="MNLYNNTTYKLSNLIPIKSLRRKLRAHIAYKIEHPKVSKYLNEN
                     YIQPFLKGEIAPFIFKKKQDFKDDKIIWQLWFQGEENASDMIRQCFKSVQRQMGDEYK
                     IIILNEENIKDYLDFPDFVLEKIKQKTFGEKTIVFFSDLLRVSLLATYGGIWCDASIF
                     LSDKIPLNLRAREFFAFERARNRPSREKLKRIIKSPYFSYGYFNWNEDFMVKMLSSFI
                     IAKSNSHFISALRDILINYWQKEKNIINHYYFVLHVIFELLKKYGYSNNTYKNMSDIE
                     CHLLQFYAKNKFDSKLWQEIQQQSFLHKLTHFRTIKKDSMIDKIIIQGIN"
     gene            complement(19866..20396)
                     /locus_tag="R8X70_000941"
     CDS             complement(19866..20396)
                     /locus_tag="R8X70_000941"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928728.1"
                     /translation="MIKIYVEGKSDKIFLDLLCKNLKIDEFETIPIGGNNLSSSDLKS
                     IKEDISDMRIEKICIIFDADDDYQKTKENLQQQLKNLQNEKIKIFLFPNNKDNKEIEI
                     LLTKIAKYPHFITCFKEYSKCLKDKGTILNEKELNKNLIYAYNQACGSGTKEICLDHY
                     DLDHEYIKPLIDFLKA"
     gene            complement(20402..21133)
                     /locus_tag="R8X70_000942"
     CDS             complement(20402..21133)
                     /locus_tag="R8X70_000942"
                     /inference="COORDINATES: protein motif:HMM:NF024700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEF2928729.1"
                     /translation="MQSSIVSISDNLNENKDITIHFNHKCQKNEQENILTIREIKNIE
                     EKTGVVERQYQAKEYVNKSNAIYFPVNIFSFESIYFLRNIRMANKEEKLVKYLQIFDE
                     NIKDVEEINGEILIKSLDFNQKVPLKIFGYGFIKFFNYICALVSNEANYILIDEIENG
                     LHYKTTKKLIESLIELSRKNNIQMFISTHSLEFLSSVEKVANEKEFKDLGVFNIYRYK
                     ENVYCKHYQSEQLKDLLNNGIELRR"
BASE COUNT         7579 a         3687 c         2656 g         7222 t
ORIGIN      
        1 aagaatttca gtaaaatcga actttaatat attaaaataa tattaattac catctttatt
       61 atgattaaat tcaggaacta tttcttttaa aatttcagct atattttggc aatcttgcaa
      121 ttttttaata taatcattta aaatttgaat atccatcttt tcatttttag caacaaaaat
      181 actctcatat tctgtctttg catcattctc atcgattagc aattcttcaa aaagcttttc
      241 tccacgtctt aaacctgtga tttttatctc taagtcttct cggttggata gaataagcat
      301 ttttttagcc aagtccataa tcttaaccgg ctcgcccata tccagcacaa aaagctcacc
      361 tccttttgcg atagctccag cttgcaaaac aagctgcact gcttcactta ctagcataaa
      421 ataacgcact atatcagggt gagttaaggt taatggctca ttatttgcaa tttgagcttt
      481 aaatttaggt atcacacttc cacttgatcc taaaacattt ccaaagcgca cacaagaaac
      541 ttcaaaattt tcatcactcg aatttaaggt ataaagctca catactcttt tagtgcatcc
      601 catgatattt gttggacgta ccgccttatc tgtgcttatc ataacaaatt tttttacttt
      661 atttttttta gctacatcgc atagagtttt agtacctacg atattattaa gcacagcaga
      721 atgcggattt tgctcacaaa gaggcacatg cttataagca gctgcatgca agatcaattc
      781 aggcttatac tccttaataa tctcatctaa actttgctcg tctaaaatac taagcaaaac
      841 aggggtaatt ttttctttat ataagcttaa atcttcatta atcttataaa gattaaattc
      901 gctatgatca agcattataa gatgttttgc accaaattta atacactgct tacaaagctc
      961 acttcctata gttccgcctg cgccacttac caaaactact ttatctttta aaaatgaagc
     1021 cacagcacta tcatctaaat ctttaggttt tctagcaagc aaatcttcta tgctgatatc
     1081 tcttgcttca tttcttgtaa aagaaaaaat cttaacatca ctgattccat aagcaataag
     1141 ctcttcaaac aaagctttaa gctcagcttg atctagtttt aaagctataa tagcagtttt
     1201 aacaccttca ttgacataat ctttaatttt acttttatct tcaacgataa atttatcgca
     1261 atatgttcct ataagctctc ttctagcatc tacaacaccc acaggaaaaa gacccaaaga
     1321 gccttccttt gctcccttta gcaaatgcaa agcctttgaa gtagcaccca ccactataca
     1381 aggagtttct tcttttgcgc gggaaggctt aaagtctata agcattcttt tagaaattct
     1441 taaagtgcct acaaacatat aagaaagaat aagatcaata cctataaccg aacgcgggaa
     1501 aggattgaaa aaatcatcgt aaaaataaaa aatcaacaaa aaacaaattt cagccaaaac
     1561 caaagcaaaa aatatctttc ttgcttcact taaggaaaaa aaccgccatg ccaccttata
     1621 aattctaaaa ataaataaaa aagctatttt taaaaccagt aaaataagtc ccgctttaat
     1681 cataccctca taaaaaatac taggaatttc cccgctaaaa cgcaaagaaa aagctaaaaa
     1741 tatagagagt ataaacaaaa atgcatcaaa acataagaaa aaaatcagcc ttttgctttt
     1801 ataaaaatcc atcatcaagc ctttacgctc ttgataataa gttctgaaat ttcacgcaca
     1861 ttgtctttac tcatcgctgt gccacttggc aagcatatcc cttttttaaa gaagaactca
     1921 ctattgccat ttacataagc cttggcacct ttgaaaacct cttgagtatg catagctttc
     1981 caaagtgggc gtgtttcaat ttgctctttt tgcaaatctg ttataagttt tgaaattttt
     2041 ggatgcaaaa tcaagtcttt ttgcgaaatt tctatacatt tttgataagc attcatttcg
     2101 tttttatcaa aatcaatcaa agccgtgctt aaccagcgat tgcttcttga attttcaagc
     2161 tcatctaaaa agacaaaact atcacctaaa aattctttat accactcata aatttctctt
     2221 ttttttagca ctctttgttc taaaacttcc atttgcgcca cgccaatagc gcctaaaaca
     2281 ttactcaagc ggtaattata accataatct aaatgttcat aatgcaaaca attttccctt
     2341 gcctgagtgc tgtaaaatct cgctctttcg attttttgct tatctttacc tataagcata
     2401 ccaccgcctg aagtggtgat gattttattt ccattataag aataagctcc aaattctcca
     2461 aaagttccta aagccctacc cttgtaaaaa cttcccaaag cctcggcggc atcttcgatt
     2521 aaaataatat tttctttttc gcaaatttgg acgatctcat ccattttggc cgcattgcca
     2581 taaagatgag ttaaaatcaa ggcttttggt tttttttcgc tctctttaat agcaagcttt
     2641 aacagatcaa tatctatatt aaaagtctca tcacaatcaa taaaaacagg ttttgcctta
     2701 agatagcaaa taggagccac tgaagcaata aaagtaaaag atgaagctaa aacaatatca
     2761 tcttgctcca ctcctgctac tcttaaagcc aagtgcaaag cggccgtagc tgaatttagc
     2821 gccaaagcat tttcgcattg agcgtaatct ttaacacttt cttcaaaacg atttacaaat
     2881 tcgcccaaag gagctatata attgctttta aatacttctt ctatatattt taactcattg
     2941 ccacccatgt gcggaggaga aagaaaaaac ctcatttttt atcctttatt ataaacagtg
     3001 attttactaa gatgatgtat tttatctaaa ataatttact aagtatcaaa cattaaaaat
     3061 tcttttgcaa tcaaagctta tttttattat atcttaagat taaaagtaat tttttaagga
     3121 ttaaaatatc tacattcttt ttgcaggcac tcccacaaaa acaccctttt cgctttgact
     3181 tttcactaaa gtcgccccac cccctaaaat gctatcatct gccaaactta aatttggcaa
     3241 aacacaagaa ttaatcccta aaaaacaatt tttgccaatt ttgacatttc ctgcacactt
     3301 agccccaacg cttatatggg aaaactcacc cacctcacat tcatgctcta tcacgcttga
     3361 agtatttaaa atcacgcctt ttttgatttt tgcttttgca tttactacca cataaggcat
     3421 tattaaaatt ccagcatctt ctgctatatc cgcactttgg ctaataatcg cacttttgtg
     3481 gataagattt acgatcttaa agccactgtc tgaaatttgg ttaaaaagct tttttcttat
     3541 ttcattattt ccaatagcta tgaaaatatc atattttggc aaagagcttt caaatttttt
     3601 acccttaaaa tcatctaaaa aaatacattc tttatagccc aaattcgtag cgacatcagc
     3661 acaaacaagc ccatgtccgc tcgcaccata aatgtaaatt ttttcagttc ttgccattaa
     3721 atttctccgt tgtaacatga ccttctttgc ttactccgct tctttttaaa acctttaagg
     3781 ctgttaagaa catgattttt aaatctagta gaaaagaaat attttttaca taatacacat
     3841 caagttcaaa ttttttttgc caagaaatcg tatttctacc atttacctgt gcccatcctg
     3901 tgataccagg acgcacttta tggcggagtt tttgctcttc attgtaaagg ggtaagtatt
     3961 ctactaaaag aggtcttgga cccacaaaac tcatatcacc ctttaataca ttaaaaagct
     4021 gtaaaagctc atctaagctt aaacttctaa caatcttccc aaaagccttc aaacgcaact
     4081 catcacttaa gagctcgccc ttttcatctc tttcatcact catggtttta aatttataaa
     4141 ttttaaaaat tttttcattt aaacctggac gattttgagt aaaaatcaca ctaccttgag
     4201 ttatttttaa aagcaaagca gtgattaaaa taagaggcga aaaaagcacc aaaagaaaca
     4261 aagccaaaac aaaatcaaaa attcttttta tccatttctc atacattttt aatcacccta
     4321 tcataaagtt ctaaataacg ctgcgcgata acattttcat cgtattgtaa agcatcctta
     4381 gctgcatttt tacctagatt gattcttaaa cttttatctt ctaataaaac ttgtattttt
     4441 tctattaaat ctttactatc tttggtctta gcccaaagcc catcataagc atttgaaatt
     4501 gcctcaacac aaccctcaca atcacttact acaataactt tgccacaagc tttcgcctct
     4561 aaaacactta ctggaaatcc ttctttatag cttggcaaaa caaagatatc gcaattttgc
     4621 aaaagttcta ctatatcact tctagcaccc aaataaaaaa ccttgcctga atttaaaaat
     4681 tccaaactcg cacaagaagg attatcatct cttccgccca ctaaaacaaa atttgcccta
     4741 tcttttaaat actctgcact ttcataaaat tcttttacac ctttatgcca caaagcccta
     4801 gctatcatca aaacaatagg cttttcatca atttttaaat tttgccaaaa agctttttta
     4861 gcttcttgct ccactctcat aggaaagaat tttttaagat tgatacccac ggatttaatc
     4921 acgcaaattt tattttcctt aagtcctaaa tttcgcataa aatccgcatt agcttgattt
     4981 acaaagatga aagaatcagc gattttaaaa ctaagtttat aaagagtatt gataacaaaa
     5041 cgcactaaat ttgctttaaa acccttgtct atataaaaag atccaagtcc ctcaacaaga
     5101 ccgattttat aaggaatttt ggcatatttt gcagctatta aaccaaaggt attgctctta
     5161 tgagctccac tttgcaaaag atccaaattt aagtttttta aaacattttt aagatgtaaa
     5221 aaatttttaa aaacaattaa aggatttaaa ctcgctcttg aaagctcata aacaacgata
     5281 tttaaattta aagcctttaa tttttcggta tattcatctt gtggcactat gacaaaaacc
     5341 tcatctcctc ttgcaatcaa agctttaatt ataggcaatc taaaatgata tatacttgct
     5401 cctgcgtgag ttaaaaagcc tattctcatt gtaaaaacct ttaaattttg agtttaaaaa
     5461 cttttgcatc tctagcatta atcactaaat catacaaatt tttatcataa tttccaagga
     5521 aaaacatttg cacataagca ctattaaaca tagttttatc cattaaaata aactgagcat
     5581 aaggtatggt gctatcttta agataaaaaa tataaaattg agccgtatca tcaataggag
     5641 tgattttata ttcaccttgt ttgatagaat taatctctat gatactattt acggatatag
     5701 tactattatt tattttaaaa cttctaaaat catcacttaa tgcaatacca ttgctaagat
     5761 aaatttctcc atttttaaca tcaagtggat aagctgcact aaaagtaaaa ggtttattta
     5821 tctcacctgt ctccaaatcc acaaaagaaa aactagccac agttgaaaaa atcaaagaca
     5881 ttctagctgg catatagata tacacatcgc gtgtttttgg cgtattgatt ttaaaatcag
     5941 gcttggaaag cgaagctaaa aacaaatcca cattattttg attataatct ttcatcatgg
     6001 cttgtaaaag atcatttttt aaaatatcat ttaaaggggc gtaaaaactt ttttctgtgt
     6061 attctacact aagtcttgcc atatttgcag cagccacttg atctttactt agaacaaaag
     6121 atgggaaaaa attatccttg cctaaatgct tacccccatc agccaaagtt ttaacatcgc
     6181 tgtaatacct aataggatat ccataatccc accaagttac tacataatct tctctttgtg
     6241 caattttttt aagctcatct aatttcgtag cctcattttg agaaaaaaca gttggtgctt
     6301 tataattgtt gatatgatag aacataggaa ttaaacttaa aaaagtaaaa ataaaaacgc
     6361 ctatattggc ccaccaatag gtattattgt ttttttgttt tctttcttgc aaaagactca
     6421 ttaaaaaacc aaatccaagt gctaaaacag gtactgcata aatagtaaaa cgaagtccac
     6481 tcttaagtgc taaaaatcct aaagctaaca tcggcaaagc caaaatcata cttttatgtt
     6541 ttctaacaag gaaaataaag ccgattaaag atacaaaaaa tacaagctcg cttccgctaa
     6601 tcctttgcat aaaaatactt aaatctatac tttctacctc ttgtatggtt tgatttacat
     6661 taaaatacat aaaaccttga gccaaatttg cactctcatc acttctaaaa atataaaatt
     6721 taagttgata gagtatagga tcaattccac cgcttagtat caaaaatacc aaagttgcca
     6781 aacctaaaat tccaagcaaa gcaaagctaa aacgcttatt ttgcaaaaca aaaagactaa
     6841 aaagtatgac aatgatggcg ctttgataaa accaagctat atttgaaagt gtgatagaag
     6901 ctaggataat agccatataa agtgtttttt cttttatatg aaaaaccaag gtataaataa
     6961 agaaaagtcc tagtaaagca acatttaaag tatagcttga tggataccac caaagataaa
     7021 ttcctacaaa caaaggcagt gctattaaag ataataaatc ttttttcaaa atcagcctta
     7081 tcataaagaa aactatcatc attgcaagaa ctataacaag catatcagta tcataatatc
     7141 cgctcatcgt gcgattataa tagctattag ctatactggc tagcaatgct gcaacaaacc
     7201 ccattaaagg gcatttgtat tcattagcaa tcaaaatcaa aggtataacc accaaagaag
     7261 ataaaaaagt actgatatat ataaaaatgc tttctaaaga aaaaggagtt attttataaa
     7321 accaatatgt gagcgttgaa agcgaagaac cataataact caaatcatta ggttgatgaa
     7381 aacccgctat catatctctt gcaccctctg caaaagcata tccatcattt gagataatca
     7441 taagctcgtt attgaaaaaa tattcattaa actcacttgc ccaaaaaatc caataaaacc
     7501 tacataaaac actaaagaca tacgctaaaa ttataaaagc caataaaata aaagttgggt
     7561 ttttaaagta ttcttttttt aacatatctt atcctaataa atattttaaa gcattgtgtg
     7621 cgatttttgc tttatcaaaa tcaagagccc tatccttggc ctttttctta taagcttttc
     7681 ttaaattttc atcctcgagc attgttttta agcccataaa catagaattt tcattattta
     7741 cttctactaa aagtccaaat tcatcatctc caaaaagctc tcttgcacca cttctatgat
     7801 cagtgcaaac caccgcacag ccacaagcta gactttcgat taaaacattt gaaaaaccct
     7861 caaacacaga agcaaaagca aaaaattcac acttagacat atatttgtaa ggattattat
     7921 caaagcccaa aagcaaaact ttatcttcta aattcaagtc tttaatcaaa gccaaaagct
     7981 catcttttag cactccctcg cctaaaatca caagctttaa atctgttttt aatctcgcat
     8041 aagcacggat aagcaaggca tgatttttac cctcatcaag ccttcccacg cttaaaataa
     8101 atttatcctt taagcttata tcttcaagtg ctttttgttc tattttttcc aaatctatag
     8161 cattgtataa aatttcacat tttgctttgt caattttaaa attacacaat aaatcttcta
     8221 aatttccctt agaattaggc aaaatcaaat cagcccttgg gtaaagcaaa gtaatcaaaa
     8281 gtttattggc taaagaattg aaattgtttt tagcatacat cacgcttgga gtggtacatt
     8341 cgttgattac aaggcgagtt ttgttgccaa atatttttgc catcaatgca atataattag
     8401 gcctatttaa aaaaacaaat tctgtatcga tatttaattt ttggcaaagt tttttatatt
     8461 ttaaagctaa aaaaggaagt tttaaaaatt ttaaaatagg attttcacta ggttttgaac
     8521 gctctaaaaa atggattttg cattcagaaa tttcataaga aattttatca ttcattaaaa
     8581 tcaaatgcac ttcaaatttc aaacttaaaa tcggaagtaa agttgccact actctttcag
     8641 cacccccact tcctaaagaa taaataaaaa tcgctaattt ttgcataaag ccacccgaat
     8701 ttttgatagt ttttcaatca ttttacttgg aattatactt aaagtaagta atatcaaagc
     8761 aggagcattg attttaatgc tcaaactttt aaacaaacaa tgataaagtg ctttataatt
     8821 tgcacttaat tttgcataat acgctgccat tttataataa ctcgcacaag tttttctata
     8881 atcatcatcc ccagaagctt ttaactcatt ttctaaaatt ttcgcaagct ctaaataccc
     8941 caaatgcacc ctatgagcat ttttactcgc tcctagcgtg acactatctt ttctaaaaac
     9001 acgataaatt ctaaaagctt tatggatata aaaacttttt tcttcgtata aattcaccca
     9061 aagcgtggct tcgttgccat aaaattcctc gttaaaacgc ttatttttaa gcaaagaagc
     9121 cttaaaaaca gaaaaaaatt ccccactaaa acgctgcatt aaaaaatctt tcttagaaat
     9181 ttcatcctct ttttgcaaac ctctaccgct aaactcatca cttaaaattc cttctttttc
     9241 tataaggcaa tttccaaaaa catgagaata accctcatct actttttgca ttaaaacacc
     9301 caaagcatag ggtaaaagct catcatcatc atctaaaaag gttataaatt caccacttgc
     9361 tttatccaag ccattgtttt tattgccatt agggccttgt ttgtagtttt gatttaaaaa
     9421 atacttaatg cgtttatcac ttttttgcaa attctctaca acgcttttag tatcatcact
     9481 agaattatca tcgcttataa tgatttctaa gtctttaaag tcttgattta agatactctg
     9541 aactgccttt tgaagtaatg aagaacgatt aaaagtagga actataacag aaagtttagg
     9601 catttttaac ctcatcaata agctcaagcc attgcttttt aatatgagaa atttcaaaat
     9661 cttcacatct ttttttagca tttataacga tattttttct tagttgctca tcttttaata
     9721 caagctcaag ctttctagcc aaagctattt catcatcaca acccactaaa aatccatcct
     9781 tattatcgtt aattaagtcc ttagctccat tataataaga agttgaaatt ctacacactt
     9841 caaaatacaa actctcgatc aaaaccgttg gcaaaccctc aacaaaagaa caaagacaaa
     9901 gtactttagc cttttcatag agcgctttta cattttcaac acgccctaaa aacttcactc
     9961 ttatgcctaa agattttgcc ttatattcaa gctcttgtct taattcccca tcaccagcca
    10021 caacaaattc ataatcctct tgcaattttt tatctaaatg cgctatggct tttaaaaaca
    10081 tttgagggtt tttattttga tctaaacgac ctataaaaag caccaaattt tctttttcaa
    10141 aatactcatt taaagaaatt tctgtgctaa aatgacaagg attaggcaaa agttttaccc
    10201 tttttacaaa tttttcataa taaattttat cactacttcc aagcacggtc aaagcatcgc
    10261 aaaaaggata actcaagcgt cttaaaaaac gccaaatttt agattttaaa taagcttcat
    10321 tactatgttc gcttatgatt aatggggttt ttaatcctat cttagcaaaa atacaagcaa
    10381 tatttgtcgt atctaaaaaa gagataaaaa catcgctttc attttctttt aaagcttttc
    10441 ttaatgccag atatttttta aaacggcttg cgattttatg atataaagtg tcaaatctaa
    10501 attgctctaa agttataagt ttgatatttt cttcaagttt ataaaaagaa tcgcccacat
    10561 gaaatttgat gatacttacc tcatgctgag tgcaaagcgc atttgctaaa gtcgctaaaa
    10621 cacgctcagc acctcctgaa tttaaagtgg ctatgataaa agttattttc actttttatc
    10681 ctccttaaaa agtttgccat gttctaaacg atagatgcta tcacaacgcg tgatggttga
    10741 aagacggtgc gcaataataa tcatggtttt gtctttagaa atcttataaa tttcatccat
    10801 aatccttgct tcgctttcag tatcaagcgc agaagtagcc tcatcaagaa ctagaatttc
    10861 aggatctagg tacaaagctc ttgcgatggc tatgcgttgc ttttgtccac cgcttaaatt
    10921 actcccacca tcgcctactt ttgtttgcac tccttggggt aaatttttca caaaatgttc
    10981 taaattagct tgcttaatca ccctttgaag tttttcttca tctacttcat ctccaaagct
    11041 gatattttta gcaatgctgt cattaaaaag atagatattt tgcgggatat aacctatttt
    11101 ttggcgataa ttcttaacat ttttcatatt taattcattt ttatctacaa gcaccctacc
    11161 ctctctaggg cttaaaagtc ctatgattat atccactaaa gtgctttttc cacaaccact
    11221 ttctcctata aatgcgatct tttcgccttt ttttatactt aaatttaaac aagtaaataa
    11281 attctttttg tctttatatc caaaacttaa attttctagt cttaattctt tatcaaaatc
    11341 aattttttct tcacccaaac tctcttcttt ttgctttaaa atttgataaa taatatctaa
    11401 agaagagcga taataaagta aatcatgata gcttgtaatg atacgatttg cacttggcat
    11461 caagcgataa agcgctaaaa caaaaatgga aatagtcgct aaaattccgg atatatcgct
    11521 ttgattttta aatactaaaa aaaccactat aaaaacaagt acacaaaagc caaccccttc
    11581 aagataaatt cttggcatgg cacttacgct ttcattggtg atatttgcct tagcaaaaat
    11641 ctcgctttga gttttaaaaa gatttaaaac gccatcttct ttggttttga gctttattaa
    11701 tttaaaatta tttaaatttg tattaagaat ttcaaaaaaa ttcttcatcg cttcttcgcg
    11761 tttaagacct gcttttttaa cgataggact aagaactttg atcaagataa aagcatttat
    11821 aatcataaaa agacttaaaa ataaagtgat tttataattt actaaaagca tgagagtgta
    11881 aagtaaaagc acgacaaaaa tttcactcat catcagcaaa aatgatgaaa tcatagtgct
    11941 tagattgtaa acttctccgg taatagactt tagaatttcg gattgatttt tttgagtaaa
    12001 attttcataa tctgtattta aaaattttgc aaaaacttta taagcgatag catgatacct
    12061 accctttgaa aagcgggcta agaggtgaaa ataataacta tttaacaaag cgcgcaaaac
    12121 ataaaagaca ataagcacaa caccaaaata aactataatc tcaaaaacag gtaaagcaag
    12181 atagtcttta agctggatta aatacttatt tctatcaaaa taagaaaaat cactagccaa
    12241 agtaataaaa ggcatcacta aagaaatagc aaaactttct ataaaagaaa taaaaaccga
    12301 aaaaagcagt aaagagaata aaaatttttt atcctcttta ctcaaaataa aaaatatttt
    12361 ttttagcact gcttttccca atcaaatgca gatttgcaaa taagatccaa atcatcaaat
    12421 ttaggctgcc aagaagtaag atttctaatc ttgcttgcat cagaaatcaa aactgaagga
    12481 tcacctgcac ggcgtggggc aagctcgact ttaaaatcca ccccacttac tcttttcatc
    12541 gcatcaataa cctcttttac actaaaacca tgaccatagc ccacattaaa aatattgctt
    12601 tcattatttt ctagataatc caatgccgcc aaatgagcac ttgaaatatc atctacatgg
    12661 ataaaatctc ttatacaagt gccatctttt gtatcataat catcaccaaa tataaaaagc
    12721 ttatcgcgtt ttcctgctgc gcattctgct gctactttga taagcaaagt cgctttagga
    12781 tagcgctgtc ctaatttata atccatacaa gcacctgcaa cattaaaata tcttaaaata
    12841 cagtatttaa attcaggatg agccatattt gcatcacgca aaacctcttc actcataagc
    12901 ttgctgcgtc cataaggatt gataggtgct aaaggactat tctcgcttac aacaggggtt
    12961 gtaggttcgc cataagtagc tgctgtagaa gaaaagataa atttacccac ccctgtttgg
    13021 atacaagttt ggattaaatt ggttgtatta atcgtgttat tcatatagta ttttaaagga
    13081 ttttgcatgc tttcaaacac ttcaatactc gctgcaaaat gcaccactgc atcaaatttt
    13141 tccctttcaa aaagtgcttt tacgccttca aaatcactta aatcttgctc aaaaaattta
    13201 aattctctta tattttgcaa atcttctatt gcgattttag aacccttaga aagattatct
    13261 aaaacgcaaa tttcatgatt tgtttttaaa aactgcctta aagtatgaga gccgatgtaa
    13321 cctgcaccac cactaataag aattttcatt ttttacctcg atgatttaaa attaaaaatc
    13381 aattttaata tatttatttt aacgattaaa ttttcatctt agaaatttca ttttcacaag
    13441 ctttacaaaa aatttccaca taggcacgat ttgctttttt tgcctttaaa aattcactca
    13501 tagaatttaa aaaataagca taatcctcat cgcttacatt acccttgatc aattcgtatt
    13561 ttaaaaaaag catataggtg tttaaaacat cactttcgca atactcgtga attttttcaa
    13621 tcttatcttc ataataaagc ttcatcacct catcgccatg cacatcgtat ttacctggta
    13681 aatctgccat agcacaaatc gtatcaagct ttaaacccct tgtcgaacca aaactttcaa
    13741 acaaatcaca atgttttaat tctgaaaatc tagttttata attattccac ttatcacttt
    13801 gtgtatcaag ataattagcc gctttgatat tgtattttaa agcccttaaa acaagtaaag
    13861 gcatatcata atttttacca ttaaaactga ctaattttgg ctcgtatttt tcaatgaaag
    13921 caaaaaaatt atggatcatt tctttttcat tttctccatc gattttattt acttttataa
    13981 attttccata atgatcgcta ataactgcgc aaatgcttac gatcttatga taaggcaagg
    14041 gtaaaaactc acttccgctt tgctcttttt gccactctag cgcttttaag cttacttcta
    14101 aatcttctcc ttcaaaagcc aaagttttgc gaattaaatc cgtatctggg atgctttcac
    14161 aatcaaaaat gcaaatataa ccttcatttt tcatcatttt taaccttttt tcaaataatt
    14221 ttgctaaaat catagcaaaa atttaaaaat tttaggtttt aatgaaaata gcaatcattc
    14281 gtttatcagc ccttggggat attatccaaa gtgctgtggt tttacaattt atcaaaaaat
    14341 ttaaaaaaga tatagaaatt cattggtttg tggatgaaaa atttgaaggc atactcaaaa
    14401 atcatcccct aatcgataaa ctttatgctt tgcctctaaa ggacaaaaaa atcattcaaa
    14461 gtttaaaaat acttttagag gctagaaaaa ataattataa tgcggttatg gatcttcaag
    14521 ggcttgtaaa atcggctatt gtgagtagaa ttttaagtag aaataatttt ggttttgata
    14581 aaaacagcct taaagaaagc tttgcgcata atttttacaa ccaaaaatta aacatagatt
    14641 ataatgaaaa tgtttttgta agatatctgg gtctaacttc tttcatgctg aataagtatt
    14701 ttgatcctaa agatctagct tttaaagaag atgtttttag cgtggatgaa aaattaaaac
    14761 aactcttaag cgaaaaaatg caacttacaa aaaataaaaa aaacatactc atccatgtgg
    14821 gatcaagtga agaaaataaa atctatccta aaaccaagct tgcactactt tgcaaactca
    14881 tcatcaaaga atttcctgaa ataaaaattt tcttaggctg gggcaatctt aaagaatatg
    14941 aatttgctaa agaagtcata gagctaggcg ctataagtca agacaatata gaaatagctc
    15001 ctaaatttag tcttgaagaa ttgatagttt ttacaaaatc catggattta atcataggaa
    15061 atgatagcgg cccaacgcat ctagcttttg ctttaaatag gccttctata accatctttg
    15121 gtgcaacgcc aagctaccgc aatgctttta aaaccaatat taataaaatt atcgatacag
    15181 gtaaaaaaat cacaaatgca aaacatcttg ataaaagcga cttttgtata agtactatcg
    15241 aagaagagga tatcttaaaa cttgtcaagg aacttttcgg agatgaataa agattatctt
    15301 taccttagtg cttattatat acttaaattt ttagtctata ctatgcctca ttttatttta
    15361 aatttccttg ctttttgtgt ttcaaagatc gtttttaaac tcgataaaaa acataggaaa
    15421 atcatagata taaatttaaa actttgcttt ccctataaag atgaaaatga aagaaaagaa
    15481 cttgctttta aaatttataa taattttgcc aaatttggat tagattgcat taaaaaccaa
    15541 aacacaagta aagaaaaaat tttagctaaa gtcgtctttg acaatgaaga aattttaacc
    15601 caagccttaa aggagcaaaa aggggtgatt ttcgctactg ctcattatgg aaattgggag
    15661 cttttaagtc ttgcttatgc tgctaaattt ggagcgattt ccatagtggg taaacaactc
    15721 aaaagtcaaa gaatgaccga acttttagct aaaaatcgca ctcaatttga catagaactt
    15781 atcgataaaa aaggtggact tagaaaaatg ttaagtgcta ttaaaaacaa gcgtgcactt
    15841 ggcatactta cagatcaaaa ttgcaccgat aatgaagggg ttaggcttga tttttttggt
    15901 aaaagagtaa attatcaagc aggagctagc atcttagcca aaaaaacagg ggctttgatc
    15961 atacctgctt atatttatca aggagaggat gaaaaatttc acattaaatt tttcaaaacc
    16021 cttgatcctt taaactctag cctagaagaa cttacaaaat accaagcaaa aacttgtgaa
    16081 gaaatgatcc aatttaagcc tgatgagtat tttttctttc atcgtcgttt tgtaagctat
    16141 gatgaaaaac tttacaaagg tatcaaatga atcttgaaaa aataagcgtt atcatcatag
    16201 ttaaaaatgc tcaaaatacc ctgtgtgaat gtttaaactc tttaaaagaa tttggagaaa
    16261 tcatactttt aaacaatgaa agcactgacg ataccttaaa aatcgctaaa gaatttcaaa
    16321 aagaatttgc gcatttatac atttacgaaa gcaaatttat aggctttgga gctcttaaaa
    16381 atcttgcttt aagtcatgct aaaaatgagt ggattttaaa tatagacgcg gatgaaattt
    16441 tagaaaacga agccaaagaa gaattaaaaa aacttgaatt tagagaacaa aacatcctag
    16501 ctctaccacg caagaacctt tataaaggag agtggataaa agcttgtggc tggtggcctg
    16561 atcatgtttt aagagtgttt aataaaaaac atacaaaatt taatgaaaac ttagtccatg
    16621 agagtttgat cttacataca aatactcaaa aggtttatct taaaaatgga ctaaagcatt
    16681 ttgcttttga aagtattgat gacttgcttg acaaacttca aaaatactcc aagctttggg
    16741 ctttgcaaaa tttacacaaa gaaagtggaa tttgcaaggc tttggtgcgt gggttttgga
    16801 ctttttttag aaattatgtt ttaaaaaaag gaatttttta cggatatgaa ggctttatca
    16861 taagtgtatg taatggtttg ggagcttttt ttaaatatat gaaactatat gagctaaaaa
    16921 agcaaaaacc aaaaacttgt gccctaatca tcacaactta taatcaaccc aaacgccttg
    16981 ctttagtact cgatagtgta aaaaatttag atcctttgcc taatgaggtt ttaatagcag
    17041 atgatggaag taaagaagat acagcaaaac ttatacaaga atatcaaaaa aattttcctt
    17101 gtgtattaaa acatatttgg caagaagata agggctttcg tgctgcagca agtcgcaata
    17161 aagccatcaa tgcttcaaat agcgagtata ttattttaat cgatggggat atgattttgg
    17221 aaaaaagctt tatcgccgat catttaaatt ttgctagatt aaaaactatc ttacaaggtt
    17281 ctagaaccat tttaaatgaa aatgaaagca aagagatctt aaaaaataat gattttaaac
    17341 tagccttcaa caaaaaaaaa ttaaaaaata aaaagaatga ttttttagct tgcctgatct
    17401 ataatttttc aaaaactaat aagaattttt ttaaaaaatc atatcttgta aaaggtagca
    17461 aaacttgcaa tatgagcttt tataaaagtg attttgaagc cattgaggga tttaatgaaa
    17521 aatttgttgg ttggggtaga gaagatagtg agtttgtagc tagattttta tttaataatg
    17581 gcttatttag acgccttaaa tttaatgctt tagcttatca tatatatcat gaagaaaata
    17641 gcaaaaatat gctagaaagc aatcatcaaa tttatctaga tactataaaa aataaaaaag
    17701 cgacttggag ataatatgaa aactgtaggc atagtaatcc ctatctataa tgtagaaaaa
    17761 tacttaagag aatgcttaga aagcgtcatc aatcaaactt atgttaattt agaaattata
    17821 cttgtaaatg atggtagcac cgatgagaat tcattgaata tagctaagga atatgcctta
    17881 aaagacaaaa gaattacttt atttgataaa gaaaatgggg gactaagttc agctagaaac
    17941 acagggatag aattctttta caaagagtat gaaactcatt tttcaaatga aattgatggt
    18001 ttttacacct ttaccgttgc aaatgaaaat ccgcaaaatg tttataaaat ttacaaaaat
    18061 aaaaatactt ttatagaaaa aaatctagaa gctcctgata ttgattattt aattttctta
    18121 gattctgata attcttggga attaaactgc attgaagaat gtgtcaaacg aatgcaagat
    18181 attgatatat tatggtttga tcatctgtgt gtttatgaaa aaggtattga agataaagga
    18241 caaaaaacaa gaatgcaaat tttctcctat aaagaagaat gcattataaa cccaaaagat
    18301 tatgctaaaa gagctttaga ggttgggtca agagatattt cttttagttg gggtgggatg
    18361 attgatttta attttttaaa gaaaattaaa cttaaatttg taaattatat catcaatgaa
    18421 gatatacatt ttggtatgat tctttttgca agcgccaata agatttatgt tctaccaaaa
    18481 agactttata aatgcttact tagatcaaat agtatttcaa accatgataa aaaagtaaca
    18541 aaggctaaca tttctcatta ttttaaaaat atttatgaag cttttgatga agatgcgaag
    18601 tcagctaaag aatatttaag actagcaagt agggtaatta ctgttttaaa acttatagac
    18661 ttttttcaag gtaaaaaaga aaatgaaaac agcaaggcta taaaagaaat ctttctaccg
    18721 ttttatgcca aaaaagcatt aaaatttaaa aaagttaata aagatccttt aaatcttaaa
    18781 aatgaactgg ataaaatcaa gccctttgta aaaaatattt taccctacga tgcttggaaa
    18841 atccttcaga aaataaaaaa tatctttagt taattccttg tataataatt ttatctatca
    18901 tggaatcttt tttaatagtc ctaaaatgcg taagcttgtg taaaaaactt tgttgttgaa
    18961 tctcttgcca aagcttacta tcaaatttat ttttggcata aaattgcaat aaatggcatt
    19021 ctatatcact catattttta taagtattgt ttgaataacc atactttttt aaaagctcga
    19081 atataacatg caatacaaaa taataatgat tgattatatt tttttctttt tgccaataat
    19141 ttattaaaat atctcgcaat gctgaaataa aatgggaatt gctcttagca attataaaac
    19201 tactaagcat tttaaccata aaatcttcat tccaattaaa ataaccataa gaaaaatatg
    19261 gactttttat aattcttttt aatttttccc tactaggtct atttcttgcc ctttcaaaag
    19321 caaaaaattc ccttgctctt aaatttagtg gaattttatc acttaaaaat atgctcgcat
    19381 cacaccaaat tccaccgtaa gttgctagca aagacactct taaaagatca gaaaaaaata
    19441 ctatagtttt ttctccaaaa gttttttgtt tgattttttc taatacaaaa tctgggaaat
    19501 ctaaataatc ttttatattt tcttcgttta aaataataat cttatattca tctcccattt
    19561 gtctttgcac tgatttaaaa cattgtctta tcatatcact tgcattttct tcaccttgaa
    19621 accatagttg ccatatgatt ttatcatctt taaaatcttg ctttttttta aaaataaatg
    19681 gagcaatttc accttttaaa aagggttgta tataattttc atttaaatat ttacttactt
    19741 ttggatgctc tattttgtaa gctatatgag ctcttaattt tcttcttaaa gattttatag
    19801 ggattagatt gctcaactta tatgttgtat tgttatataa attcatagtt ttaaaccttt
    19861 ttttgttatg ctttcaaaaa atcaatcaaa ggttttatgt attcatgatc taaatcataa
    19921 tgatctaaac atatctcttt tgttccactt ccgcaagctt gattgtaagc atatatgaga
    19981 tttttattca attctttttc attcaagatt gtccctttat ccttaagaca cttactatat
    20041 tctttaaaac aagtgataaa atgaggatat tttgctattt ttgttaataa aatttcaatt
    20101 tctttattgt ctttattgtt tggaaataaa aatattttta ttttttcatt ttgtaaattt
    20161 tttaattgtt gttgcaaatt ttctttagtt ttttgataat catcatccgc atcaaaaatt
    20221 atacaaatct tttcgattct catatcactt atatcttctt taattgattt taaatcagaa
    20281 gaagagagat tattgcctcc tattgggatg gtttcaaatt catctatttt aagattttta
    20341 cataataaat ccaaaaaaat tttatcactt tttccttcta cataaatttt aatcacttgt
    20401 tttaccttct aagctctatg ccattattta gcaaatcttt taattgttcc gattgatagt
    20461 gcttgcaata aacattttct ttatatctat atatattaaa tacacctaaa tctttaaatt
    20521 ctttttcatt tgccactttt tcaacactgg ataaaaactc taaactatga gtagatataa
    20581 acatttgaat attattcttt ctactaagtt ctatcaaaga ttctataagt ttcttggtcg
    20641 ttttataatg caaaccattt tctatttcat ctataagaat ataatttgct tcattagaaa
    20701 ctaaagcaca tatgtaatta aaaaatttta taaaaccata accaaatatt ttaagtggaa
    20761 ctttttgatt aaaatctaaa ctttttatga gaatttctcc attgatttct tctacatctt
    20821 ttatattttc atcaaaaatc tgtaaatatt taactaattt ttcttcttta ttagccatac
    20881 ggatatttct taaaaaataa atagactcaa aagaaaatat attaactgga aaataaatag
    20941 cgttgctttt attgacatat tctttagctt gatattgtct ttcaacaact cctgtttttt
    21001 cctctatatt tttaatttct cttattgtta aaatattttc ttgctcgttt ttttgacatt
    21061 tatgattaaa atgtattgtt atatctttat tttcatttaa attatctgat attgaaacaa
    21121 tagatgattg catcaaggat attt
//
LOCUS       DAQUWA010000030        21125 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.030, whole genome shotgun sequence.
ACCESSION   DAQUWA010000030 DAQUWA010000000
VERSION     DAQUWA010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21125
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.030"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..797)
                     /locus_tag="R8X70_000943"
     CDS             complement(<1..797)
                     /locus_tag="R8X70_000943"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEF2928730.1"
                     /translation="MQIVQTLETINVNTDDINVFQYFKDLITKNFTKVVGRKNKIFSF
                     FEENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLIFEQNNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFITYIRNYFQDHNIEYNEMTNILILEYKNENTLELFEAFADE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYK"
     gene            complement(799..1518)
                     /locus_tag="R8X70_000944"
     CDS             complement(799..1518)
                     /locus_tag="R8X70_000944"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEF2928731.1"
                     /translation="MLEIGFCTLEDECPYLKDRRSRIEYKYIENCSKEINSELIRRGW
                     RRFGRYFSRPICKDCKECLSLRILVDEYQFSRSERRVINKNTNTKIILRKPLLSNEHL
                     FLYDKYHRFMEEKKTWKRYDLNFRQYYNLYVDGFMNFGYELAFYVEDKLVCVDLIDWL
                     EDGISSIYCFYDPDFSHLSLGKFSLLSEIKIAKKEKLKYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTKELFENEILWER"
     gene            complement(1518..1754)
                     /locus_tag="R8X70_000945"
     CDS             complement(1518..1754)
                     /locus_tag="R8X70_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928732.1"
                     /translation="MDFFDSLKSIKKEMQTHSKEQKNLKNSNKKDMKHFNKEIKTQPP
                     EMNLDKEMQEVFLKQEKLQDEFLEFIKNADIKKI"
     gene            complement(1754..3196)
                     /locus_tag="R8X70_000946"
     CDS             complement(1754..3196)
                     /locus_tag="R8X70_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HEF2928733.1"
                     /translation="MVQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVGRIIEIAKACGADAIHPGYGFLSENYDFAKACEEAGII
                     FIGPKSEVIHKMGNKNIARKLMAQNGIPIVPGTEKLNAYSMDEIKVFAEKIGYPVILK
                     ASGGGGGRGIRVVHKEEELENAFDSCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPVTEEITGVDLIVRQIRIAGGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFTIDIRTTIPFLIAITKTREFRRGYFDTSFIETHMQELL
                     ENTEDRHQDNKEEVIAAIAATLKKIRESRE"
     gene            3331..4494
                     /gene="ftsW"
                     /locus_tag="R8X70_000947"
     CDS             3331..4494
                     /gene="ftsW"
                     /locus_tag="R8X70_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HEF2928734.1"
                     /translation="MIADKKLFYLSCILISIGIVFSYSLTVFTVLFFDYNEFHFFIRQ
                     LFFGLSGILIMFFISRLDPDKILAKRIILAILIGSFICIIILPFLPSALATASGGAKR
                     WIRLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIKHEALILLPYCILASIVIGY
                     IYITQNDLGQSVISFFLILALAFFAGASKRLFAFGILIIMMIGIMVIFSNQRRIQRIA
                     SWWGNIQDAFLPMLPDWMADALRVSGNSEPYQISHSLNAIAHGGLFGEGLGLGTFKLG
                     FLSEVHTDFVLSGITEEIGLFGLGLICFIYLWMILRIFRIAGRCEEKQDFIFCSGIAL
                     LLLFSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
     gene            4491..5507
                     /gene="murG"
                     /locus_tag="R8X70_000948"
     CDS             4491..5507
                     /gene="murG"
                     /locus_tag="R8X70_000948"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEF2928735.1"
                     /translation="MTIVLTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDRAW
                     FESETRFKAKFFLSSRGVVNQNKLGKINSLLHTFKLSKECKQIFKDYDIKAVFSVGGY
                     SAAPASFAALFSHLPLFIHEQNSKSGSLNKLLKPFAKQFYSAFEKEIVPYPVADKFFE
                     KARIRKELKNIIFLGGSQGAKFINDLALNLAPELQKKGINIIHQCGKNELEKYQQAYK
                     DLNIQADVFDFSPHLEEKMQNADLAISRAGASTLFELCANTLPSIFIPYPHAAKNHQY
                     FNAKFLQDKALCQIFMQNNTYPDEILKAIFKLNLEDISTRLKDMAQKNGADILLEKAL
                     KLIK"
     gene            complement(5500..6660)
                     /locus_tag="R8X70_000949"
     CDS             complement(5500..6660)
                     /locus_tag="R8X70_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HEF2928736.1"
                     /translation="MLSFRKIFWLNVAIVIIVAFNLRAPITAIGPMIDIIQDEYNLNS
                     TLAGVLTSLPLIAFGSISFIVGYFSPIRAIIVGIFLIFIAELIRSYLGVYGLFLGMLG
                     IGCGIAIANVLLPSFIKEKFPKKMASMMGIYSLVLSISSIAGIALSMPLLNIFDLAGA
                     MVFWSVFSFIALMIYYPQAKNGRFFRTKKKESKKINLLKNPTTWKITLFMGFQSFLAY
                     SLFFWYVQIIVEKGYDKDFATNMVLFSQLVAAPISLFGPLLLGKLKKSLHAPYIAILC
                     AMYAVSFGILLAFDTRFMIMLAAFIVGFPWGGVFGIALLFIAQKSSNAKIAARLSAFA
                     QGFGYLIAAQGQWIIGFFHDMFGNFTSSICILFIVGILVNIFGYLAYKSKVI"
     gene            complement(6668..7522)
                     /locus_tag="R8X70_000950"
     CDS             complement(6668..7522)
                     /locus_tag="R8X70_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2928737.1"
                     /translation="MKKYVLSLALVGASLLGASELKYQEFDGFKSPESIFVDKNSVYV
                     SNVGEKLEPLAKDNDGFISKLDKNGKVLEHKFISNLNAPKGMMEVANTLYVVDIDVVR
                     GFDLKSKKEVFNLPIKGAIFLNAIEKLNDDTLLVSDTGTGLVLKVDLKAKKYDELLKL
                     DIAKFGGPNGLYLDRKNDKLFIAGYHPDGASGGVVMSYDLNDKKLSVIKNEKEAYDGI
                     VPYENALLVSSWGENLNGVIYRLEDDKALKLDLPSIKGPADIFIEGDTLWIPKMVEGK
                     ILKVELKN"
     gene            complement(7585..8460)
                     /locus_tag="R8X70_000951"
                     /pseudo
     CDS             complement(7585..8460)
                     /locus_tag="R8X70_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            complement(8475..9080)
                     /locus_tag="R8X70_000952"
     CDS             complement(8475..9080)
                     /locus_tag="R8X70_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEF2928738.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQVEKLAKSGIDAFVLREKDLSEF
                     EYYDLAKEVLAICAKHKTTCFLHFFDRECLKLGHRYFHMPLALLRQEPKMSKYFHMIG
                     TSVHSKEELLEAMNYGVNYAFVGHIFESSCKKDLEPRGLEFLNSLLSFSQIPLYAIGG
                     INVQNIASFKDINVAGVCMREVLMREKDVKKYLVECKRNLL"
     gene            complement(9070..10215)
                     /gene="thiH"
                     /locus_tag="R8X70_000953"
     CDS             complement(9070..10215)
                     /gene="thiH"
                     /locus_tag="R8X70_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HEF2928739.1"
                     /translation="MQDYMQYLPHMQEIKSEILNKVLSQVQSYDESQFSAKDVKNALN
                     QTHLSIEHLKALLSSAAEDFIEELAFKSAKTKQKYFGNSISLFTPLYLSNYCNSKCVY
                     CGFQKGNKIARAKLSEDEIHEEMQAIAKTGLQEILMLTGEGREFASVEYIAKACKIAR
                     EYFKVAGVEIYPMNEDEYKILHENGCDYVTIFQETYNPLKYSKIHLGGEKRIFPYRFN
                     GQERALRAGMRGVAFAALLGIDDFRKDALATALHAYFLQKAYPHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERVGFRDEVVKLGATKMSAGVS
                     VGIGEHKGEKKGDGQFEISDERGVDEILAMLKNSNLQAVMSDSIYVG"
     gene            complement(10218..10994)
                     /locus_tag="R8X70_000954"
     CDS             complement(10218..10994)
                     /locus_tag="R8X70_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEF2928740.1"
                     /translation="MQENLKNDSLKIGKYEFKSRFILGSGKYSLELIKSAIEEAKAQI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIE
                     VIGDSKYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGTPAQACEAMQMGVSAVMANTAIAEAKDI
                     ALMAKAFSLAIQAGRAGYLAGLASVSEAKASSPLTGFLRD"
     gene            complement(10998..11801)
                     /gene="thiF"
                     /locus_tag="R8X70_000955"
     CDS             complement(10998..11801)
                     /gene="thiF"
                     /locus_tag="R8X70_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HEF2928741.1"
                     /translation="MMRIKFNGKELDTKLSTSLDFFKSVSKNENDVWIINGFATKENI
                     KIHENDELFCIERNALPPKDALDAMMRARHTPKLHDKLKISSVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVVEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYIKTEICTL
                     KIDEENLPDLFKGIDIVCEAFDGALAKAMIAQNFHRFYKDTTLICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKVGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            complement(11798..11989)
                     /gene="thiS"
                     /locus_tag="R8X70_000956"
     CDS             complement(11798..11989)
                     /gene="thiS"
                     /locus_tag="R8X70_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEF2928742.1"
                     /translation="MIINGEKFELKELKFMDFIKEKGFKIELIALELNGEIIPKSEFE
                     NLILKENDKAEIVSFVGGG"
     gene            complement(11979..15065)
                     /locus_tag="R8X70_000957"
     CDS             complement(11979..15065)
                     /locus_tag="R8X70_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEF2928743.1"
                     /translation="MDIFKKYTSEIQAIFEGKNYNEHSFRTCFENLLNELKPKEVKII
                     HEPKSEKGQGSIRPDFKTYKLIDKEKELSYNHLVGFIECKNLDVDLNLHLKGKQLSKY
                     LQISPNIIFTNYKRFILFSFEKVVFDIDLLDDKLDLKEENISIFRNLLKAYFDDNSTT
                     IKSKQELVKVLSTQSFYLSNALKISFDESDANSSFKRFFRKTKDTFKNIEKIDLKDEE
                     FCDILAQAIVYGIFVSYIENDDYDLEKIPIENFISFLPSTFRTLSEFVYFAIPSFSLP
                     QDIKYTLENIKKTLSLIDKIALCKILNQDLESVSIYLYEDFLKAYDDLRATQKRKEGG
                     VFYTPKSIVDMIVSSLDELLKTKLNKNKGFNDQGVKVLDFATGTGSFLASVFEKIISK
                     ESEVFKNEAIKNKFLKDIYGFELSFVPYIVARLKLGQILRKNGFVNFSDADFQIFLNN
                     TLDLEKIANFDMFMPLENLDTEWKKARDVKHSQDLLVILGNPPYNAKSKNKGEDILEL
                     LKIYKQGLNDKNIQPLNDDYIKFMRFAQWKLLEQNKKDLFEEKKGLLGFITNNSFING
                     KTHRKMRESLYKSFDEIYILNLHGSDKDAKNDENVFDIKVGVCISLFVKYKDEPSNGA
                     KVFYYSTGDNNIFSRKEKFALLDDVRQKGLDAIKWEELSLDEPYFWFIKREFKNKEYE
                     NFWALASDKAEDKKSIFLNYSSGIQTEKDNIAIQLNKQSMENVLKDFKNLTKEENVKK
                     YNLDNSIILNTLTQYENNTGFISKIHYRPFDIQWTFYSEKQGFLGRPRYKTMQHFLDK
                     ENLGLCFIESSIHDYFSHSIVCSNITDGNFFGFRSFTAPLYLYVNNEKIPNFTSEFLA
                     YKENHKILKDKSPEEILYFIYANLYNPRYREKYLEYLKTGFARINFEVEQKTFDDFAT
                     LGKKLVELHLFKRDLKDEIDFIFLKEDKKANFKIEKYQEKDRFIDNKIILNEDLAISP
                     ISAEIWQFTIGGYQVIKQWLKYRNDYECSKEELEHLLKMCKVIKETINLQKELNDY"
     gene            complement(15074..16174)
                     /gene="dapE"
                     /locus_tag="R8X70_000958"
     CDS             complement(15074..16174)
                     /gene="dapE"
                     /locus_tag="R8X70_000958"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEF2928744.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKKGI
                     KNLLLTKKFKDEGEHLAFGGHVDVVPAGEGWKNDPFEPLEEEGFIYARGAQDMKSGVA
                     AFVDAVKNADFKGARLSLILTSDEEGEAIYGTKAVLEWMQERDMLPDYAVVAEPTCVK
                     KIGDSIKIGRRGSINGKLLIRGKQGHAAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLRLMFNVRNSPDTNLEDVRAYVEKICHGLNYELE
                     LTQSSEPFLTSIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSIEEFEKLCLVFKDLVENFN"
     gene            complement(16179..16781)
                     /locus_tag="R8X70_000959"
     CDS             complement(16179..16781)
                     /locus_tag="R8X70_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HEF2928745.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPINILILIYALKAFKNSIAVGLGA
                     FSVDLLYLLLLQFGLLNFLDNVIFMRALAIFGFCFLSYMAYLMLKKKNEDLHLDQHKD
                     FKESLLKSYIKGIILNGSNPYVIGFWLSATGIVLSNQHAYSTILGLVVAILFWIGALA
                     FVVAKYSYLFSAKVIRIINIVSALIIEYFALSLLYKTFIG"
     gene            complement(16774..17475)
                     /locus_tag="R8X70_000960"
     CDS             complement(16774..17475)
                     /locus_tag="R8X70_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HEF2928746.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRK
                     NPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDV
                     VHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEEQAPAYATLYS
                     LLHQTSLFISVGTSGAVLPVGRYASMCEKSILNIYEKDANLERYFDKIYTEDIISAID
                     KIVLDIENFMKDGNV"
     gene            complement(17518..>21125)
                     /locus_tag="R8X70_000961"
     CDS             complement(17518..>21125)
                     /locus_tag="R8X70_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEF2928747.1"
                     /translation="LEYKNYIIQAYDNEEYLKEKELQNSYKKSNNNIELFKTWKESYE
                     LQYFKQGIFEANVNAYKILEITPTFDNLKELKEEGKYHEFAKILRKHNISGKENAFDK
                     LVNIFLCKIYDETFNKNNLKFGYFGVMADTYANMQDRLMWLYKEAMKEFLGEKITFVS
                     NEDIEKDFKQLKIKTLKEVMQNYIKELKFYSNNDFAFLEVHNKELFLKNALVLKEIVE
                     LFANYKLTQNSTNQFLGNLFELFLQKGMKQDEGQFFTPIQICEFIMYSLPLQEMLNKN
                     SKALRVIDYACGAGHFLNTYANELKRYLTEDELKEHYKNIYGIEKEYRLSKVSKVSSA
                     MYGQNEINILYADALASFELANTNNLEGEKAKPQIESNSFDLLIANPPYSVKGFLETL
                     SDKSKNTYKLFNDDINMETNNSIECFFCERANQILNDNAKAAIILPSSILNKDSIYKN
                     TREILFQNFDFIAIVELGNQTFGATGTNTIILFLRKKETFKQENHLISQDYSLIKERI
                     EAENLKDNESFYQNYLSAYCDFRKFDKELYSNFLNGNLDSKLAELEAFKDYRNAFRQT
                     SDYKKLKESKIYKESKDKQDLEDKAFLAYAQAIEKDKLLYFSLSLNQEVLIIKSPSDI
                     KEQKKFLGYEWSNRKGDEGLKELHEPYLSPLFERGNPQNETKLNTLIYKSFLNTLDVI
                     PQELQIYATKARLVDMMDFEKVEFNKAISLNPSNSTQSEMSNPFINSKFELVRLKDFV
                     LDIQTAKRPSGGVGKYENGALSLGGEHIDNKSGYIKLDNPKYVPIEFYESFALQDKGI
                     VKQFDILICKDGALTGKIAMVRNEFIRKSAMINEHIFLLRCDNIAKQKYLFYILHSYS
                     GQQALKSKITGSAQGGINKTNLESILIPNADFEIQKQIVAECEKVEEQYNTIRMSVEE
                     YQNLIKAILQKCGIIDDGGGYELNSILENLQKLEFKLDFNLLLSLIEEQISHSEVLVE
                     ETQSKERKQDFNAFKNFSKTIQELLQTLSTPPKDGWKRISLKNEQYMELNPSKKEISK
                     LDENMLVSFIEMASVSDKGYIQSKIDRSLNEVRKGYTYFIENDILIAKITPCMENGKC
                     AIAKNLTNNIGFGSTEFHIFRAKTGLDSSFLFYNLNQQNIREKAALAMTGASGHKRVP
                     ISFYENLTIPLPPLEIQEKIVQNIELVEQQIDFLNLKLELLEKEKEKILQKYLFS"
BASE COUNT         6880 a         3859 c         2724 g         7662 t
ORIGIN      
        1 ttcttataaa gtgcttttaa gttatcatag gcgatttgta ttttttcaaa ctgttctctt
       61 gcgtaagctt tttctattgc actttttcct tgatgaaaat caggatgata aagttttacc
      121 aaaatcaaat atttttgtct gatttcacta agatcatttt gcggagtgca ttctaaagta
      181 ttaaaataat tactaaaaag cttagctaaa gcattaaatt tccatttcat attttcttta
      241 ttgtgaatat tttggcgaaa ttttttatac tcttcgcggt caacttcaaa attcacgcaa
      301 tattttaaat gctcgctctc atctgcaaaa gcttcaaaaa gttcaagggt attctcgttt
      361 ttatattcta aaattagaat atttgtcatt tcattatatt ctatattatg atcttgaaaa
      421 taatttctta tataagtaat aaataatttt tcattagagc ttaacttcat caaaattcta
      481 cccgcaacaa aatcaatctt gataaacaac ataggcttaa gcatattatt ttgctcaaaa
      541 attaatctaa aagttttaaa atgagcatct tgtaaattct ctataccttc atttgtgctt
      601 ttacgatatt tttgatctaa aacttttaag aaataacggc gctgtggaat ttcattttct
      661 tcaaaaaaag aaaaaatttt atttttacgc cctactacct ttgtgaaatt tttggtaatt
      721 aagtctttaa aatactgaaa aacattaata tcatcggtat taacattgat agtttctaaa
      781 gtttgcacga tctgcatctc atctctccca taaaatctca ttctcaaaaa gctcttttgt
      841 gccttttaaa atttcattgg gtgtataatc ggctttatac gataaagatt gacacttttt
      901 tacaaaatat cccaaataaa tatattttaa tttttctttt ttggctatct ttatttcgct
      961 aagtaaagaa aatttaccca aagaaagatg agaaaaatct ggatcataaa agcaataaat
     1021 actagaaatt ccatcttcaa gccaatcgat taaatccaca caaacaagct tatcctccac
     1081 ataaaaagca agctcatagc caaaattcat aaatccatca acataaagat tgtaatattg
     1141 tctgaaattt aaatcatatc ttttccaagt ttttttctct tccataaagc ggtgatattt
     1201 atcatacaaa aacaaatgtt cattacttag taaaggtttt cttaatatga ttttggtatt
     1261 tgtgttttta ttgatcactc ttctttcgct gcgcgaaaat tgatattcat ctactaaaat
     1321 tctaaggctt aaacattctt tgcaatcctt gcaaatagga cgagaaaaat acctaccaaa
     1381 acgacgccag ccacgcctga taagctcgct attaatttcc ttagagcaat tttctatata
     1441 tttgtactct atcctagaac gcctatcttt tagataagga cattcgtctt caagagtaca
     1501 aaaaccaatt tctagcatta aattttctta atatctgcat ttttaataaa ttccaaaaac
     1561 tcatcctgta atttttcttg ttttaagaaa acctcttgca tttctttatc taagttcatt
     1621 tctggtggct gtgtttttat ctctttatta aaatgcttca tatccttttt atttgagttt
     1681 ttaaggtttt tttgttcctt agaatgagtt tgcatttctt tttttatgct cttaagacta
     1741 tcaaaaaaat ccattattct ctactttcgc gtattttctt taaagtagct gcgattgcag
     1801 cgataacttc ttctttatta tcttgatggc gatcttcggt attttctaat aattcttgca
     1861 tatgagtttc tatgaaagaa gtgtcaaaat accctcttct aaattctctt gttttagtaa
     1921 tcgcgatcaa aaatggtata gttgttctaa tatctatggt aaattctttc aaagctcttt
     1981 caagtttatt aaccgctaaa tcataacttg tagcttttat gattaatttt gcaagcatag
     2041 aatcataata aggaggcacg gtataatctt tataaatatg actgtccacc cttacagatg
     2101 gtccaagtgc tggataatac tcccctatct tacctggact tggaatgaaa tttttccata
     2161 cattttcagc cgtaatcctt gcttctatag caaaacctct tggcttgata tcactttgtt
     2221 ctagatctaa aatttccccg cctgcgatac gaatttgacg cacgatcaaa tccacacccg
     2281 taatttcttc agttacagga tgttctactt gaattcttgt attcatttcc ataaaataaa
     2341 agcggttata atcatcaagt aaaaattcta tagtccccgc atttgtatag ccaacagcct
     2401 tagcagcagc cacagcagta acacccatag tttttcttag attgtctgaa attccaggac
     2461 aaggtgcgat ttcgatcact ttttgatgtc ttctttgaat agaacaatcc ctttcgcaaa
     2521 gatggataat atttccataa ttatccccta aaatttgaaa ttctatatgg cgaggattga
     2581 ctacatattt ttccataaat acttcatcat tgttaaaata agtcaatgct tctcttttac
     2641 acgaatcaaa agcattttct aattcttctt ctttatgaac gacgcgaatt cctcgtccgc
     2701 caccacctcc tgaagccttt aaaatcacag gatagcctat tttttctgca aatactttga
     2761 tttcatccat actataagca tttaattttt ctgttcctgg aacgatagga atcccatttt
     2821 gagccattaa tttacgagct atgtttttat ttcccatttt gtggataact tcagattttg
     2881 gacctataaa aataattcct gcttcctcac aagctttagc aaaatcataa ttttcactta
     2941 aaaatccata accaggatgt atagcatcag ccccacaagc tttagcaatt tctataattc
     3001 ttcctacatc caaataaccc cttatagcat ctgtgcctat gcgataagct tcatcggcaa
     3061 tttttacatg caaacactca cgatcaggtt ctgtaaaaac cgcaacactt ttaatatgta
     3121 aatccctaca agcacggatt acacggacag ctatttcagc acgatttgct ataagaatct
     3181 tatgaatttg taccataatt tgcctttata aattttattt acatactcat attctagcaa
     3241 aatatcctta caaaaactta gcaaaaaatt taatttattt tagttataat aaacttttaa
     3301 attattccga aagaaaaatt acaattttac atgattgccg ataaaaaatt attttattta
     3361 agttgcattt taataagcat aggtatagta ttttcatatt ctcttactgt ttttactgtg
     3421 cttttttttg attataatga atttcacttt tttatacgcc aactcttttt tgggcttagc
     3481 ggtatattaa tcatgttttt tatttctcgt cttgatcctg ataaaatact tgctaaaaga
     3541 attatcctag ccatacttat aggctctttt atatgtatta ttatcctgcc ttttttaccc
     3601 tctgctttgg cgactgctag tgggggcgca aagcgttgga ttcgcttagg acctctttct
     3661 atttcacctg tggaattttt taaaatagga ctgatttatt ttttagcttg gagttataca
     3721 agacgcattg atgatagcaa aaaagcgatt aagcatgaag ctttaattct cttgccttat
     3781 tgtattttag cttctatcgt gataggctat atttacatca cacaaaatga tttagggcaa
     3841 agcgttattt ctttcttttt aattttagct ctagcttttt ttgcaggtgc tagcaaaaga
     3901 ctttttgcct ttggaatttt aatcattatg atgataggaa tcatggtaat ttttagcaat
     3961 caaaggcgta tccaaaggat agcttcttgg tggggaaata tacaagatgc tttcttgcct
     4021 atgcttcctg attggatggc agatgcttta agggtaagtg gcaatagcga gccttatcaa
     4081 atttcacact ccttaaatgc catagctcat ggagggttat ttggtgaagg acttgggcta
     4141 ggtactttta aacttggttt tttaagtgag gtgcatactg acttcgttct ttcaggtatc
     4201 acagaagaga taggactttt tggcttgggg cttatttgtt ttatttatct ttggatgatt
     4261 ttaagaattt ttagaattgc aggaagatgt gaagaaaaac aagattttat attttgttca
     4321 ggcattgctt tgcttttact cttttcattc tttatgaatg cctttggtat catttctctt
     4381 acgcctttaa aaggggttgc agtacctctt ttaagctatg ggggaagttc aatgtgggca
     4441 atttgtatag gaattggata tgttttaatg atttcaaaaa aggttaaatt atgacaatag
     4501 ttctaacagg tggcggaacg ggtggacacc tagccattgt gcgatgttta ctagaaagtg
     4561 cgattaaaaa aaacatagag tgtgtttata taggaagtca aaatggtcaa gatagagctt
     4621 ggtttgaaag cgaaactcgt tttaaagcga aattcttttt aagttctcgt ggggttgtca
     4681 atcaaaacaa acttggaaaa atcaattcct tactccacac attcaagctt agtaaagaat
     4741 gtaagcaaat ctttaaagat tatgatatca aagcggtttt tagcgtagga ggatacagtg
     4801 ctgctcctgc ttcttttgct gctttgtttt cacacttgcc tttatttatt cacgagcaaa
     4861 attcaaaaag cggttcttta aataaacttt taaagccttt tgctaagcaa ttttatagcg
     4921 cttttgaaaa agaaatcgta ccctaccctg tggcagataa attttttgaa aaagcaagaa
     4981 ttcgcaaaga attaaaaaat atcatttttc taggcggatc ccaaggagct aaatttataa
     5041 acgacttagc cttaaaccta gctccagaac ttcaaaaaaa aggcattaat atcattcatc
     5101 aatgcggaaa aaacgagctt gaaaagtatc aacaagctta taaagactta aatatacaag
     5161 ctgatgtatt tgactttagc cctcatttag aagaaaaaat gcaaaatgca gatttggcta
     5221 tttcgcgagc gggtgcaagc acactttttg aactttgtgc caatactcta ccaagtattt
     5281 tcatacccta ccctcacgct gctaaaaatc atcagtattt taatgctaaa tttttacaag
     5341 ataaagcttt atgtcaaatt tttatgcaaa ataacaccta tcctgatgaa attttaaaag
     5401 ctatattcaa gctaaattta gaagatattt ctacaaggct taaagatatg gcacaaaaaa
     5461 atggtgcaga tattttgctt gaaaaggcat taaagcttat caaataactt tgcttttata
     5521 ggctaaatat ccaaaaatat taacaagtat gcccacgata aaaagtatac aaatagagct
     5581 tgtaaaattt ccaaacatat catggaaaaa tcctatgatc cattgccctt gcgctgcgat
     5641 taaatatcca aacccttgag caaaagccga aagtcttgca gctatttttg cattagaact
     5701 tttttgagcg ataaaaagca aagcgatgcc aaaaacacca ccccaaggaa accccacaat
     5761 aaatgcagca agcataatca taaaccgagt atcaaatgca agtaaaattc caaaagatac
     5821 cgcatacatc gcgcacaata tagctatata aggcgcatgt aaactctttt taagttttcc
     5881 taaaagcaag ggaccaaaaa gagagattgg agcggctaca agttgagaaa aaagtaccat
     5941 attggttgca aaatctttat catagccttt ttctacgatt atttgcacat accaaaaaaa
     6001 caaagaataa gccaaaaaac tttgaaaacc cataaaaaga gtgattttcc aagtggttgg
     6061 attttttaaa agattgattt ttttactctc ttttttcttg gtacgaaaaa agcggccatt
     6121 tttagcttgg ggataataaa tcattaaggc aataaaagaa aaaaccgacc aaaaaaccat
     6181 agcacccgct aaatcaaata tatttaacaa aggcatagat aaagcaattc ctgctataga
     6241 agaaatgctt aaaacaagac tataaattcc catcatactt gccatttttt taggaaattt
     6301 ttccttaata aaacttggca ataacacatt ggcaatagct ataccacaac ctataccaag
     6361 cattcctaaa aataaaccat aaacacctaa ataagaacga ataagttctg cgataaaaat
     6421 aagaaaaatt ccaacaataa tcgcacgaat aggagaaaaa taacccacta taaaagaaat
     6481 gctaccaaaa gctatcaaag gaaggctagt aagcacacct gcaagagtgg aattaagatt
     6541 atactcatct tggataatat cgatcatggg tcctatcgca gtaataggag ccctaaggtt
     6601 aaatgctaca attatgacaa tagcaacatt taaccaaaaa atttttctaa aagaaagcat
     6661 taaatcctta atttttaagt tctactttaa gtattttacc ttctaccatc ttaggaatcc
     6721 ataaagtatc accctctata aagatatctg caggaccttt gatagaaggc aaatcaagct
     6781 ttaatgcttt atcatcttct aaacgataaa tcaccccgtt taaattttca ccccaagaac
     6841 ttacaagcaa ggcattttca taaggaacga ttccatcata agcttctttt tcatttttaa
     6901 tcacgcttag ttttttgtca tttaaatcat aactcatcac aacaccgcca ctagcaccat
     6961 ctggatgata tcctgctata aaaagcttat cattttttct atctaagtaa agtccattag
     7021 gaccgccaaa tttagcgata tcaagtttta ataactcatc atattttttc gcttttaaat
     7081 ccacttttaa aacaagtcct gtgcctgtat cgcttaccaa aagtgtatcg tcatttagtt
     7141 tttcgatagc atttagaaaa attgcaccct ttataggcaa attaaacact tcttttttgc
     7201 ttttcaaatc aaaaccacgc accacatcaa tatccaccac ataaagtgta tttgcaactt
     7261 ccatcatacc ttttggggca tttagattgc ttataaattt atgctcaagc actttgccat
     7321 ttttatcaag cttagagata aaaccatcat tgtcttttgc caaaggctca agtttttcac
     7381 ctacattaga tacatataca gaatttttat ctacaaaaat actttcaggg cttttaaagc
     7441 catcaaattc ttgatatttc aactcgcttg ctccaagcaa acttgctcca acaagcgcta
     7501 aacttaaaac atattttttc atacttttct ccttttgtta aaaatattta tgctgattat
     7561 attgatttag atagaaaaag tgtgctagtt ttttgataaa aaatacaagt tttttgattt
     7621 ttgatattgc ttaggggttt gattgtattt ttctttaaat ctctcgataa accaagccac
     7681 tgaagaaaaa gcacattcat tagctatttc atttacattt tttttagaaa attcaagcaa
     7741 aactttagct ttttgcaatc ttttttcatc tagccatttt ttaggacttt gcccgaagca
     7801 ttttttaaat tctctagaaa aagtagcaaa atcaagcttt gcaaaatcag ccatttcgct
     7861 cacgcttaca aattctctcc cacaatactc aaaaagctgc gaaagatcta aacgaaattc
     7921 ttttaaaatt ccagctaaaa agcctatgaa ataagtattt ttatttaaaa gtaaatgcaa
     7981 aaaaaatctc ttcaaattta agactgacta tgggatctaa aatttgtgta ttctcatcaa
     8041 aatgcggggt aaaactttct aaaattcctt gtaaaatttt atcatttttt acccaaaaaa
     8101 tttcactctc ctcgcttgct tgttctagtt taaaaagatc tttatactta taaataagct
     8161 cgattaaaaa agcattatca aagaaaaaca aataagcttc ataaacaccg ctactaagtc
     8221 ctacattgct taaagtataa tttcccgctt ttaaaagtcg attttatagt cttttgatac
     8281 cgtatgtaaa attttatatc cttttcttac aaaggttaaa agatggctgc ctacattgac
     8341 aaaagaagag tgtgaggtgc ttacttgggt atattttgca aaagtacagg atttaaaatt
     8401 tttataatcc acacctttta attgttttaa atcttgtggc aaggaaagaa tttgctccat
     8461 tgtttcactc ttcatcaaag caagtttctt ttacattcaa caagatattt tttcacatct
     8521 ttttcgcgca ttaaaacctc acgcatacaa acaccagcta cattgatatc tttaaagctt
     8581 gcaatatttt gcacattaat cccacctata gcataaagtg gaatttggct aaaagaaagt
     8641 aaagaattta aaaactcgag cccccttggc tctaaatctt tcttacaaga actctcaaaa
     8701 atatgaccta caaaagcata atttacccca taattcatcg cctctaaaag ctcttcttta
     8761 ctatgcactg aagtgcctat catatgaaaa tacttactca tctttggctc ttgccttaac
     8821 aaagcaagtg gcatatgaaa atagcgatgt cctaacttta aacactctct atcaaaaaaa
     8881 tgcaaaaaac aagttgtttt atgtttagca caaatagcta aaacctcttt agccaaatca
     8941 taatactcaa attcactcaa atccttctct ctaagtacaa aagcgtctat gcctgattta
     9001 gcaagctttt ctacttgttt tagaaagtct atctcgacac attttctatc gcttatagca
     9061 atgatttttt tatcccacat agatactatc gctcatcaca gcttgcaaat ttgagttttt
     9121 aagcatagct aaaatttcat ccacgcctcg ttcatctgaa atttcaaatt gtccatcacc
     9181 ttttttctcg cccttatgct ctcctatacc cacgcttact cctgcgctca tttttgtcgc
     9241 tccaagtttt acaacctcat ctctaaatcc tactctttca cgacttgata tagtaatacc
     9301 tgcaaaaggt aaaaaaagtc tataagcaca aagtacttgc aagaggcgtt tttcgcttac
     9361 atctttaggg tgaattttag cattattgat aataggtctt aaacgaggta ctgaaataga
     9421 aatttcagca tgcggataag ccttttgtaa aaaatacgca tgaagagctg ttgcaagtgc
     9481 atcttttcta aaatcatcaa tccccaaaag tgctgcaaaa gctacccctc gcatacccgc
     9541 tcttaaggct ctttcttgcc cattaaaacg ataaggaaaa atacgctttt caccccctaa
     9601 atgaatttta gaatacttta aaggattgta agtttcttga aaaatggtta cataatcaca
     9661 gccattttca tgcaaaattt tatactcatc ctcattcata ggataaattt caacacctgc
     9721 aaccttaaaa tactccctag ctatcttgca agcctttgcg atgtattcta cgcttgcaaa
     9781 ctcccttcct tcacctgtta gcattagaat ttcttgtaaa cctgttttag caatagcttg
     9841 catttcttca tgaatttcat cttcgctaag cttggctctt gcgattttat ttcctttttg
     9901 aaaaccgcaa taaacacatt tagaattaca ataatttgac aaataaagtg gagtaaaaag
     9961 cgagatagaa ttcccaaaat atttttgctt ggttttagcc gacttaaaag ctaattcttc
    10021 tataaaatct tcagccgcac ttgaaagcaa ggcttttaaa tgctctatgc ttaaatgtgt
    10081 ttgatttaaa gcatttttaa catctttagc gctaaattga ctctcatcat agctttgaac
    10141 ttgacttaaa accttattta aaatttcgct ttttatttcc tgcatgtgag gtaaatactg
    10201 catataatcc tgcataatca atcccttaaa aagcctgtta atggagaact agccttagcc
    10261 tcactcacgc ttgctaaacc cgctagataa cccgctcttc cagcctgtat agctaaagaa
    10321 aatgcttttg ccatcaaagc gatatccttt gcttcagcta tagctgtatt tgccatcact
    10381 gcacttactc ccatttgcat agcctcgcac gcttgtgcag gagttccaat acctgcatct
    10441 acaatgatag gcaaatcgat ctcattaagt aaaatttgta taaattcctt agcacacaag
    10501 cctttattgc tcccaatagg tgctgctaaa ggcatgatag ctgcagcccc tgcatcacgc
    10561 atagctctag ctgcataaag atcagcatgc atataaggta agggtgtaaa accctctttt
    10621 gctaaaagtt cacaagcctt aatggtttca taattatcgg gcaacaaata cttactatcg
    10681 cctataacct ctatctttat aagctctcca cagccaagct ctctagaaag tcttgcgata
    10741 cgcaaagctt catcagcatt tctagctcct gaagtattag gcaagagggt tatattttta
    10801 gggatataat caagtatatt agcaatctct cctgtatttg cacggcgtaa ggctagagtg
    10861 atgatctgtg ctttagcttc ttctatggct gattttataa gctctaaaga atactttcct
    10921 gatcctaaaa taaatcttga tttaaattca tattttccta tttttaagct atcatttttt
    10981 aaattttctt gcatttttta ctccttattt gccaaaagct ctaagacaag attgctttga
    11041 tgtccagcgc aaatatttac acgcggtgcc ataagcccat ttcctacttt agcaccattt
    11101 accaaatccc cacacacata gaaattttta gcaatttttc ttgtttgtat actattgcta
    11161 tcgccatatc ctgcaagccc tgaagcacag attaaagtag tgtctttata aaatctatga
    11221 aaattttgtg ctatcatagc ctttgcaagc gcgccatcaa aagcctcaca gactatatct
    11281 atacctttaa ataaatcagg caaattctct tcatcgattt ttaaagtgca aatttcagtt
    11341 ttgatataag gatttatttc actgatttgc tcttttaaag cttcggtttt aaatttcccc
    11401 aaatcactta cgcggtaagc ttggcggtta agattgctag gttcaaccac atcaaaatca
    11461 atcagcttta aataccccac accgcttctt gctaaattta tcgctatatg tgagccaagc
    11521 ccacctaaac cacaaaccgc tacgctcgaa attttaagct tatcgtgaag ttttggcgta
    11581 tgtcttgctc tcatcatcgc atctaaggca tcttttggag gtagggcatt tctttctata
    11641 caaaaaagct catcgttttc gtgaattttt atattttctt tcgttgcaaa accattgata
    11701 atccacacat cattttcatt tttacttaca cttttgaaaa aatccaaact ggtgctcaat
    11761 tttgtatcta gttccttgcc attaaattta attctcatca gccacctcct acaaaactta
    11821 caatttcagc tttatcgttt tcttttaaga tcaaattttc aaattcgctc ttaggtataa
    11881 tctctccatt taattctaag gcgataagtt cgattttaaa acccttttct ttgataaaat
    11941 ccataaattt aagctcttta agctcaaatt tttctccgtt aataatcatt taattccttt
    12001 tgtaaattta tagtttcttt tataacttta cacattttta gcaaatgctc tagttcttct
    12061 ttggagcatt cataatcatt gcgatatttt aaccattgtt ttatgacttg ataaccgcct
    12121 atagtaaatt gccaaatttc agcacttata ggacttatgg ccaaatcttc atttaagata
    12181 attttattat ctatgaagcg atctttttct tgatattttt ctatcttaaa atttgccttt
    12241 ttatcttctt ttaaaaagat aaaatcaatc tcatctttca aatctctttt aaacaagtga
    12301 agttctacaa gttttttacc taaagtagca aaatcatcaa aagtcttttg ttctacttcg
    12361 aaattaatcc tagcaaagcc tgtttttaaa tactctaggt atttttctct atatcttgga
    12421 ttgtataaat ttgcatagat aaaatacaaa atttcctcag gacttttgtc ttttaagatc
    12481 ttgtgatttt ctttgtaggc tagaaattcg cttgtgaaat ttggaatttt ttcattatta
    12541 acataaagat agagtggggc tgtaaaactt ctaaatccaa aaaaatttcc atccgttata
    12601 ttgctacaaa caattgaatg agaaaaataa tcatgaattg atgattctat aaaacaaagt
    12661 cctaaatttt ccttatctaa aaaatgttgc atggttttat atctagggcg tcctaaaaat
    12721 ccttgtttct ctgaataaaa agtccattga atgtcaaaag gtctataatg tattttacta
    12781 ataaaacctg tattattttc atattgagtt aaagtattca aaattataga attatctaaa
    12841 ttatattttt ttacattttc ttcttttgtt aaatttttaa aatcctttaa aacattttcc
    12901 atactttgct tatttagctg tatggctata ttatcttttt cagtttgaat tccactacta
    12961 taatttaaaa atatagactt tttatcctct gccttatcgc ttgctaacgc ccaaaaattt
    13021 tcatattctt tatttttaaa ttctcttttg ataaaccaaa aataaggctc atctaagctc
    13081 aattcttccc atttgatagc atctaaaccc ttttgtctta catcatccaa aagagcaaat
    13141 ttttcctttc ttgaaaaaat attattatca cctgtagagt agtaaaatac cttagcacca
    13201 ttacttggtt catctttata ctttacaaac aaacttatac aaacacctac ttttatatca
    13261 aaaacatttt catcattctt agcgtcttta tcacttccat gtaaattcag tatataaatt
    13321 tcatcaaaac ttttatacaa gctttctctc atttttctat gagtttttcc atttataaaa
    13381 gagttatttg tgataaaacc taaaagtcct tttttttctt caaataaatc ttttttgttt
    13441 tgctctagca atttccactg tgcaaaacgc ataaatttaa tataatcatc atttaaaggt
    13501 tgtatatttt tgtcatttaa gccttgtttg taaattttta aaagctctag tatatcttcg
    13561 cctttgtttt tgctttttgc gttataagga ggatttccta aaataacaag caaatcttga
    13621 ctgtgtttaa catctcttgc ttttttccac tctgtatcta aattttccaa aggcataaac
    13681 atatcaaaat ttgcaatttt ttctaaatcc aaagtattgt taagaaaaat ttgaaaatca
    13741 gcgtcactaa aatttacaaa gccatttttt cttaaaattt gtcctagttt taaccttgct
    13801 acaatataag gcacaaaaga aagctcaaaa ccataaatat cttttaaaaa tttatttttt
    13861 atggcttcat ttttaaaaac ttcactttct ttggaaataa ttttttcaaa aacactagct
    13921 aagaagcttc ctgtgcctgt agcaaaatca agtactttta cgccttggtc attaaaacct
    13981 ttatttttat tcaatttagt ttttaaaagt tcatcaagag aagaaactat catatccaca
    14041 atactttttg gagtgtaaaa aacaccccct tctttgcgtt tttgcgtagc tctcaaatca
    14101 tcataagcct ttaaaaaatc ttcatacaaa tatatactta cactttctaa atcttgattt
    14161 aaaattttac aaagtgcaat tttatctatc aatgataaag tttttttgat attttctaaa
    14221 gtatatttga tatcttgcgg aagagaaaaa gaaggtatag caaaatacac aaattcactt
    14281 aaagttctaa aagtgcttgg taaaaatgaa atgaaatttt ctatggggat tttttctaag
    14341 tcataatcat cattttctat gtaagaaaca aaaattccat atactatagc ttgagctaaa
    14401 atatcgcaaa attcttcatc ttttaaatct atcttttcta tatttttaaa ggtatctttt
    14461 gtttttcgaa aaaatctttt aaaagaagaa tttgcatcac tttcatcaaa agaaattttt
    14521 aaagcattgc ttaaataaaa actttgcgta cttaaaactt ttactaattc ttgttttgat
    14581 tttatggtgg tgctattatc gtcaaaataa gctttaagaa gatttctaaa tatgcttatg
    14641 ttttcttctt ttaaatcaag cttatcatct agcaaatcaa tatcaaaaac aactttttca
    14701 aaagaaaaaa gtataaagcg tttatagttt gtaaagatga tattgggtga aatttgcaag
    14761 tatttgctaa gttgttttcc ttttaaatgt aaatttaaat ctacatctaa atttttacac
    14821 tctataaagc ctacaagatg attatagctt aactcttttt ctttatctat aagtttataa
    14881 gttttaaaat caggtcttat agagccttgc cctttttcac tttttggctc atgaataatt
    14941 ttaacttctt taggttttaa ttcgttgagt aaattttcaa aacaagttct aaagctatgc
    15001 tcattataat tttttccttc aaaaatcgct tgaatttcgc ttgtatattt tttaaatata
    15061 tccataactt ttcctagtta aaattctcca ccaaatcttt aaaaacaaga caaagttttt
    15121 caaattcttc tatacttacc ctttcatcaa tagcgtgaat tctatcatta caaaccccaa
    15181 attctactac ctttacaccg tattttgcaa aataccttgc atcacttgta ccgcctttgg
    15241 tattaagctc tggcacttca tgagtgattt tttgcacgct ttcattcatc ttttgtacga
    15301 ttttattgtc aatgcttgtt aaaaaaggtt cgcttgattg cgttaattct agctcataat
    15361 ttaagccgtg gcaaattttt tccacataag ctcttacatc ttctaaattt gtatcaggag
    15421 aattgcgaac attaaacata agtcttaaat catttggagt aacattacac acccccatac
    15481 ctccgcgaat atcagttata acgatttttg aagggctaaa ttcagcacta cctggatcaa
    15541 gatcaaaacc cgctaaaagt tttaaaaccg gtgcgaaatc atgcacagga ttgatacatt
    15601 tttcagggta agccgcatgt ccttgttttc cgcgtatcaa aagcttacca ttgatagaac
    15661 cacgacgccc tattttaata ctatcgccga ttttttttac gcaagtaggt tcagcaacca
    15721 cagcataatc aggtagcata tctctttctt gcatccattc taaaacagcc ttagttccat
    15781 atatagcttc gccttcttca tcacttgtta aaataagact cagtcttgct cctttaaaat
    15841 ccgcattctt taccgcatcc acaaaggctg ctactccgct tttcatatct tgagcacccc
    15901 ttgcatagat aaagccttct tcctccaaag gctcaaaagg atcatttttc caaccctcac
    15961 ccgcaggaac gacatctaca tgcccaccaa aagctaaatg ctcgccttca tctttaaatt
    16021 ttttagtgag taaaaggttt ttaatgcctt ttttttctat aaaaaaagct tcaaaatcac
    16081 tcagttccat agcgatgaaa tttaaagctc catcatcatt tggcgtaaca gatttaaatt
    16141 ttaaaagttc gattaaaaat tcttttgcat tcattttttt atcctataaa agttttgtat
    16201 aataaactca gagcgaaata ctctataatc aaagctgaaa ctatattgat gatacgaatc
    16261 acctttgcac taaaaagata gctgtatttt gcgacaacaa aagctaaagc acctatccaa
    16321 aaaagaatag caacaacaag ccccagtatc gtagaataag cgtgttgatt gcttaaaact
    16381 atgcctgtag cactaagcca aaaacctatc acataaggat tagagccatt taaaatgata
    16441 cctttaatat aacttttcaa aagactttct ttaaaatctt tatgctgatc caaatgcaaa
    16501 tcttcatttt tcttttttaa catcaaataa gccatatagc ttaaaaaaca aaagccaaaa
    16561 atagccaaag cacgcataaa aatgacattg tctaagaaat ttaaaagccc aaattgcaac
    16621 aaaagcaaat agagcaaatc cacactaaat gcacccaaac ccacggctat ggaattttta
    16681 aaagccttta aagcatagat taaaatcaaa atatttatag gtccaaaagg cacactcact
    16741 ccaaaaccca aaaaaactcc acttaaaaaa gaatcaaaca ttaccatctt tcataaaatt
    16801 ttctatatca agtacaattt tatcaatagc gcttataata tcttcagtgt agattttatc
    16861 aaaatatcgc tctaaattcg catctttttc gtagatattt aaaatacttt tttcgcacat
    16921 tgaagcataa cgccctacag gcaaaaccgc cccacttgtg cctacgctga taaaaagcga
    16981 agtttgatga agtaaagaat aaagcgtagc ataagcagga gcttgctctt caaacatgac
    17041 tatattgtgt cttaaatcct tacttttgca ttttgggcat tgtttatctg tgaatttttc
    17101 atagcctata ttaaaaattc cttcacattt taggcaacga agttcgggca aaaagccatg
    17161 caaatgtact acatctttac accctgcacg ctctagcaaa tcatctacat tttgcgtgat
    17221 gacaaaaagg tttttacccc atttttcttt taactgtgcg attttttcat gggcgtgatt
    17281 tggctttaca ttttgaagtt gtgcccttct tgcatcgtaa aaatcaagta cttttttagg
    17341 attttttcta aaacctgttg cagagcaaac ctccatcaca tcgtattctt cccaaagtcc
    17401 atcattatct ctaaaagttt taagcccact tggagcagac aaacccgctc cgcttaatat
    17461 cataatgttt ttcatcgcta aaccttataa aatttacaaa gtttagcgaa aaatgcttta
    17521 agaaaataaa tatttttgta agattttttc tttttctttt tctaacaatt ctaatttaag
    17581 attaagaaaa tcaatttgtt gttccactaa ttcaatgttt tgaacaattt tttcttgaat
    17641 ttctagcggt gggagtggga ttgtaagatt ttcataaaaa cttataggaa ctcttttgtg
    17701 tccacttgct ccagtcatag caagagctgc tttttctctt atattttgtt gatttagatt
    17761 atagaataag aaactgctat caagccctgt ttttgctcta aaaatatgaa attctgtgct
    17821 accaaaacct atgttatttg ttagattttt tgcgatagca catttaccat tttccatgca
    17881 aggagtaatt tttgcaatca aaatatcatt ttctataaaa tatgtgtagc cttttcttac
    17941 ttcgtttaat gacctatcta tcttactttg aatataaccc ttatctgaaa cactagccat
    18001 ttctataaat gagacaagca tattttcatc aagttttgat atttcttttt tgctaggatt
    18061 aagttccata tattgttcat tctttaaaga aattctcttc cagccatctt ttggtggagt
    18121 tgagagagtt tgtaaaagct cttgtatagt tttagaaaag tttttaaaag cattaaaatc
    18181 ttgctttctt tccttgcttt gagtttcttc aactaatact tcagaatgac tgatttgttc
    18241 ttcaattagc gaaagcaaaa gattaaaatc aagcttaaat tctaattttt gcaaattttc
    18301 taaaatagaa tttagctcat accccccccc atcatctata ataccgcatt tttgaagtat
    18361 tgccttgatt aaattttgat actcttctac actcattctt attgtgttat actgctcttc
    18421 taccttttca cattctgcca cgatttgctt ttgaatctca aagtctgcat ttggtattaa
    18481 aatagattct aaatttgttt tattgattcc gccttgagcc gaacctgtaa ttttagattt
    18541 taaagcttgt tgtccactat aagaatgtaa tatataaaat aaatattttt gttttgctat
    18601 attatcacaa cgcaataaaa aaatatgctc attaatcatt gcagatttcc taataaattc
    18661 attacgcacc attgcaattt ttccagttaa tgcaccatct ttacatatta aaatatcaaa
    18721 ttgttttaca attcctttat cttgcaacgc aaaactttca taaaattcta ttggtacata
    18781 cttaggatta tctaatttga tatacccact tttattgtct atatgttctc caccaagact
    18841 cagtgcaccg ttttcatatt tgccgacacc accactagga cgctttgcgg tttgaatatc
    18901 taatacaaaa tctttaagtc ttactaactc aaatttagaa tttataaaag gattagacat
    18961 ctcactttgc gttgaattgc taggatttaa acttatagct ttattaaatt ccactttttc
    19021 aaaatccatc atatcaacaa gccttgcttt tgtagcataa atctgcaatt cttgcgggat
    19081 aacatcaagc gtatttaaaa aagatttgta gattaaagta ttaagcttgg tctcattttg
    19141 tggattgcct ctttcaaaaa gtgggctcaa ataaggctcg tgcaattctt ttaaaccttc
    19201 atcacctttt ctattactcc actcataacc taaaaatttc ttttgttctt ttatatcact
    19261 tggggatttt atgattaaaa cttcttgatt aagacttaga ctaaaataaa gcaatttatc
    19321 cttttcgatc gcctgagcat aagctaaaaa ggctttatct tctaaatctt gcttatcttt
    19381 actttcttta taaattttag attctttaag ttttttataa tcacttgttt gcctaaatgc
    19441 attgcgataa tctttaaagg cttctagttc tgcaagttta gaatctaaat ttccatttaa
    19501 aaaattgcta taaagctctt tatcaaattt tctaaaatca caatacgcac ttagataatt
    19561 ttgataaaag ctttcattgt cttttaaatt ttcagcttct atgcgttctt taatcaaact
    19621 ataatcttga gaaataagat gattttcttg tttaaaagtt tcttttttgc gtaaaaataa
    19681 aataatcgta tttgtccctg ttgctccaaa tgtttgatta cctagctcta caatggcaat
    19741 aaaatcaaaa ttttgaaata atatttctct tgtattttta taaatagaat ctttatttaa
    19801 aatagaactt ggtaagataa tagcagcttt agcattatca tttaaaattt gatttgctcg
    19861 ctcacaaaaa aagcattcga tagaattatt tgtttccatg tttatatcat cgttgaaaag
    19921 tttataagta tttttagatt tatcacttaa agtttctaaa aatcctttta cagaataagg
    19981 cggatttgct ataagcaaat caaaactatt tgattctatt tgtggttttg ctttttctcc
    20041 ttctaaatta tttgtatttg ctaattcaaa agaagcaagt gcatcagcgt ataaaatatt
    20101 gatttcattt tgcccataca ttgcacttga taccttagaa accttactta agcgatactc
    20161 tttttcaata ccataaatat ttttataatg ctctttaagc tcatcttctg ttagataacg
    20221 cttaagctca ttggcatagg tgtttaaaaa atgtccagca ccacaagcat aatcaatcac
    20281 ccttaaagct ttagagtttt tgtttaacat ttcttgaagc ggtaaagaat acataataaa
    20341 ttcacaaatt tgaatagggg taaaaaactg cccttcatct tgcttcatac ctttttgcaa
    20401 aaaaagttca aaaagattgc ctaaaaattg atttgtagag ttttgggtaa gcttgtaatt
    20461 tgcaaaaagc tctactattt cttttaatac aagtgcattt tttaagaata attctttatt
    20521 atgcacttct aaaaatgcaa aatcattatt tgaataaaat tttaattctt tgatgtaatt
    20581 ttgcattact tcttttaaag tttttatctt taattgctta aagtcttttt ctatatcttc
    20641 attagataca aaggtaattt tctctcctaa gaattctttc atagcttctt tataaagcca
    20701 cattaatcta tcttgcatat ttgcataagt atctgccatt acaccaaaat atccaaattt
    20761 gagattgttt ttattaaaag tttcatcata gattttacaa agaaaaatat ttacaagttt
    20821 atcaaaggca ttttccttgc ctgatatatt atgcttgcgt aaaatttttg caaattcgtg
    20881 atatttacct tcttctttaa gttccttaag attatcaaaa gttggagtaa tttctaaaat
    20941 tttataagca ttgacatttg cttcaaaaat accttgttta aaatattgca gttcataact
    21001 ttctttccaa gttttaaaaa gttctatatt gttattagat tttttataag aattttgtaa
    21061 ttccttttct tttagatatt cttcgttatc ataagcttgt atgatgtaat ttttatattc
    21121 taact
//
LOCUS       DAQUWA010000031        20468 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.031, whole genome shotgun sequence.
ACCESSION   DAQUWA010000031 DAQUWA010000000
VERSION     DAQUWA010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20468
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.031"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..167
                     /locus_tag="R8X70_000962"
     CDS             <1..167
                     /locus_tag="R8X70_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HEF2928748.1"
                     /translation="NFFADHIAMIELLEKQGFNEMDMKSFILENGDFIQERQNDLFIE
                     LGAKILGHEG"
     gene            167..697
                     /locus_tag="R8X70_000963"
     CDS             167..697
                     /locus_tag="R8X70_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HEF2928749.1"
                     /translation="MSIRLLVFFTLMANCIVLNAAPVFDYTYKFTLKKDERASVEIKE
                     LGYDNGVQNFDFYWTLFDNTNIVVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYKNPH
                     IDRARLILEFSEYKKGEAIFTVYIEDKDSRLEVKFLDPRKMQLTNPPQNNQVVPMIDF
                     NEPQVEPLIQRENTTN"
     gene            714..1607
                     /locus_tag="R8X70_000964"
     CDS             714..1607
                     /locus_tag="R8X70_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEF2928750.1"
                     /translation="MQPIDDLIKQYLQELDYEPILTMLANTKSGKKLRSKLLLAIAGE
                     NANSYKICAAIELIHLASLLHDDIIDESKLRRGAKSVNAEFGTKNALMLGDILYSKAF
                     YELSQLDACFASIISDAVVKLAVGELMDVELSKSFNADKDKYLKMIYNKTAVLIEASA
                     RCGAILANLDEKAFGEYGKNLGLAFQMIDDILDIKGDEKTLGKPAMNDFKEGKTTLPY
                     IYLYENLNNEDRAQLKNLFQKDLNNDEKIWIQTKFEETKALNKAILEAKEYAHQAALA
                     IKDFSNEKLQDIIQAMIDRDF"
     gene            1607..2902
                     /locus_tag="R8X70_000965"
     CDS             1607..2902
                     /locus_tag="R8X70_000965"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEF2928751.1"
                     /translation="MYYCISFTHKNTDLSLRERLSFSDEAKKNEFLRLLSIHENIEEC
                     LVISTCNRVEIVAYVKEACAEYIIKSLALLCNVDKESLVQKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFALKNNFCAVHLSRAIHSAFKCAAKVRNETQISKNP
                     ISVASVAVAKAKELLPLDGKSAIVIGAGEMGELAAKHLITAGARVIVLNRDMEKARIL
                     CERLGVLSECDSLNNLKKYLDEYELFFSATNAPNAIITNSLIDEVSHKRYFFDIAVPR
                     DIYISENEKISVFAVDDLEVVVRKNLALREQEARMAYGIIGRETAEFFRYLNDLALTP
                     IIKAIRLQAKECANKQLQIALDKGYLKHSDEEEARKLIHQVFKAFLHTPTMNLKHLQG
                     KMQSDTVINAMRYIFDLENNLEGLNQYTCEFNMENNDEI"
     gene            2889..4598
                     /locus_tag="R8X70_000966"
     CDS             2889..4598
                     /locus_tag="R8X70_000966"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEF2928752.1"
                     /translation="MMKFSKLYAPSLKEAPKDATLPSHIFLTRAGFVEQIGSGLYNFL
                     PLGKRVLDKIRTIVKEEMDKAGAQEVNLSFVTPATLWQESGRYNVFGKELLRFKDRKE
                     NDFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLTREFDLMYNTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAKRAKKTCQDERPEANYASKFHTPDIKTIEALAQFFKINA
                     FYTIKAVVKKAIYENENKLVVFFIRGCDDLQETKAQNACNALELVDASEEELEKAGLV
                     AGFIGFVGLKNVDFYLDKELEGEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLAEVKE
                     NDCCAKCGGKLKLSKGIEVGHIFKLGQKYSKAMNANFLDENGKSKPFYMGCYGIGVSR
                     LLAVAIEANHDEKGCIWNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLL
                     DDRNERFGVKMNDFELIGFPYALVVGKGLEKDELEFIDRKTLEKKIISSKEAFDFIKK
                     SIE"
     gene            4595..4981
                     /locus_tag="R8X70_000967"
     CDS             4595..4981
                     /locus_tag="R8X70_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integral memnbrane protein"
                     /protein_id="HEF2928753.1"
                     /translation="MNYKLSLSPLFLLELVASILFIVFFGLGNFLIFILASMIFGVIL
                     LGIFWKNMLEFRISGFKDMLTQFAFVMAAFLLIFPGIVTSIFGFFVLCFGLIFNFAKP
                     RYKRNYRQNNTSDEEIIDVEIIEERK"
     gene            4978..5904
                     /gene="hemC"
                     /locus_tag="R8X70_000968"
     CDS             4978..5904
                     /gene="hemC"
                     /locus_tag="R8X70_000968"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEF2928754.1"
                     /translation="MKELVIATRKSQLALWQSEFVADFLNKTHGIAVRLEGFKTKGDV
                     LLDSPLAKIGGKGLFTKELEESMLRNEAHLAVHSLKDVPSFFPQGLILAAVSKREQSN
                     DAMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGD
                     FDAIILAMAGIKRLDLDKQVNFVYAFSKDELIPAASQGALGIESTDDEKILEFLKCLN
                     DDNALIETTIEREFIATLEGGCQVPIGINAELLNDEICVRAILGLPDGSEILKEKRMI
                     KKSDFKGFGESLAKEFIAKGAKEILKKAESMI"
     gene            5901..7706
                     /locus_tag="R8X70_000969"
     CDS             5901..7706
                     /locus_tag="R8X70_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HEF2928755.1"
                     /translation="MKDFIKILKDNDLLKVYEEPVDVDLEIAHLAYIEAKKGENGKAL
                     LFKNPIDKQNNKQYKFPVLMNAFCNEKALNLAFGRDYKEVADEISKLTKLHIPTSFKA
                     KIDFFMNLLSLKNVPPKRLKADKALYDYELLNSLEELPILKTWEEDAGRFITMGQVYT
                     QNLDKTQNNLGMYRLQVSDKNELLMHWQIHKDGANFYHEYKNAGFKKMPVSIAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKTPAKLTPCENGIFVPYNSDIVIEGYVDLEEFKV
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKEAIYQATVVGKPPLEDKIMGLGTERIFLP
                     LLQTSVPDLIDYKMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKKAPNLDDYDALISYILNRFNTNKILISEGICDQLDHASPNSCFGGKAGLDACEEAM
                     VEELEILEDEKLLELFTTKIEPVNLKQFYKESKSPIVCILLDKKEKIEQSFEKLLEFK
                     KHFRILVFLDSNNKLENPYMLVWRVVNNIDAKRDIFIKADRVGVDASAKGLVEGYERV
                     WPKQTDCTKSVIEDLILRNILENNSELFSKFEILG"
     gene            7868..8236
                     /gene="flaG"
                     /locus_tag="R8X70_000970"
     CDS             7868..8236
                     /gene="flaG"
                     /locus_tag="R8X70_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella length regulator FlaG"
                     /protein_id="HEF2928756.1"
                     /translation="MEISKANGQLDAAFANLGQRASGVHQTYSDIQAGENKSQGGDDG
                     QQRGVSEKLADITKKLNEQMDSLDTNVRFGYSDKIGSMYISVTEKSTGREIRQIPSEE
                     AIRLAEYFRDVIGMIFDKES"
     gene            8239..10167
                     /gene="fliD"
                     /locus_tag="R8X70_000971"
     CDS             8239..10167
                     /gene="fliD"
                     /locus_tag="R8X70_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HEF2928757.1"
                     /translation="MAFGSLSSLGFGSGVLKQDTIDKLKEAEQKARIDPYAKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGSITENPPASLTANSGVSLQSMK
                     VNVTQIAQKDVYQSKGLTNDSGYVNANLTKATDLTFFSNGKEYTVSVDKNTTYKDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDAQGQYQSDLEA
                     EKIFSNLGWELDKTSSIDPAKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTVT
                     DLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGTK
                     GTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAGT
                     LSFDSSKFEQKVKEDPDSTESFFSNITKYEDINHTGEVIKTGSLSKYLNSNGGNTNGL
                     EFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQNLANHINSKGIEGLKVKVE
                     SYNQNNVTGFRLNFSGDGSSDFSIKGDANILKELGLSDVNITSKPIEGKGIFSKLKAT
                     LQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLN
                     QQLNTVTNMINAANNSNN"
     gene            10179..10562
                     /gene="fliS"
                     /locus_tag="R8X70_000972"
     CDS             10179..10562
                     /gene="fliS"
                     /locus_tag="R8X70_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HEF2928758.1"
                     /translation="MQNNLAYNAYSQNQVGIESPQKLIEMLYEGILRFCARAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLDYEKGGEVAHYLSGLYTREIQLLSLANLENNEAR
                     IDEVINVTKGLLEAWREVHNNEAMA"
     gene            10546..10818
                     /locus_tag="R8X70_000973"
     CDS             10546..10818
                     /locus_tag="R8X70_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928759.1"
                     /translation="MKQWLSDFKLALIQEDVNKLESLLNALDLKKMLEDLARDFQNDE
                     LKDKLNDNLGQIKALLQEAVVLISAKKNSKACEIQKIQKALKYFKA"
     gene            complement(10806..11130)
                     /gene="rnpB"
                     /locus_tag="R8X70_000974"
     ncRNA           complement(10806..11130)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="R8X70_000974"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            11237..11806
                     /gene="efp"
                     /locus_tag="R8X70_000975"
     CDS             11237..11806
                     /gene="efp"
                     /locus_tag="R8X70_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEF2928760.1"
                     /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEEKTMQYLYDDGENCQFMDTESYEQVAISDEDVGE
                     AKKWMLDGMMVDVLFHNSKAIGVEVPQVVELKIVETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            complement(11968..13049)
                     /locus_tag="R8X70_000976"
                     /pseudo
     CDS             complement(11968..13049)
                     /locus_tag="R8X70_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788234.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
     gene            complement(13046..14278)
                     /locus_tag="R8X70_000977"
     CDS             complement(13046..14278)
                     /locus_tag="R8X70_000977"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEF2928761.1"
                     /translation="MRNLLENIKKNSQKLLNLTPKDKENIILKLACALRENFKIILEA
                     NEKDMTNFTKSGAMRDRLLLDEKRIFSLCDALEKIAYLEDPIGKISKGWVNYAGLKIE
                     KISIPIGLISVIYEARPSLSAEIIALMIKSSNACVLKGGSEAKFTNSAIFDLVYKVLE
                     EFNLQDCFVMFYERNEIMQILAFDDLVDVIIPRGSSNMIQEIASHTKIPLIKQDKGLC
                     HAFVDESANLNMALEIILNAKCQRVSVCNALETLLIHEKIAKDFIKLLIPEFEKFKVK
                     IHAHENILEHFKNSKLEISKADESTFDTEWLDYAISIKSVKDCDEAIEHINQHSSLHS
                     ETIISNNALNIGKFQRLLRSSCIYVNASTRFSDGGEFGFGGEVGISTSKLHARGPMGV
                     EDICTYKYLISGEGQIRK"
     gene            14349..15284
                     /locus_tag="R8X70_000978"
     CDS             14349..15284
                     /locus_tag="R8X70_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEF2928762.1"
                     /translation="MKKVDLIVVGAGPTGIGCAVEAKLKNKEVLVLEKSNNICQTLMQ
                     FYKDGKRVDMAYKGCEGTNHGHVPFQDGTKESTIETFQNALNEHKIEVEFGSEVESVK
                     NENGVFLVSTGKGVYECKNIIVAIGRMGKPNKPDYKLPITLTKIINFNANSVLGDEKI
                     LVVGGGNSAAEYAVDLANSNKVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGID
                     IEELEDDNGKAKVKFNDGSNETYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILAVI"
     gene            15510..16841
                     /locus_tag="R8X70_000979"
     CDS             15510..16841
                     /locus_tag="R8X70_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEF2928763.1"
                     /translation="MSNIFSTLSPFRLFVKCAVPNVISMAFISFYYIVDGIFVGKYLG
                     NDALAALALIIPFIMISFALADMIAIGSAVQISMHLGLGKKHLARKIFSSSMLIIFLI
                     SCLVGILEYLLSPVLIDFLDVNEDIKSMAKECMLVFALFAPFTMCSFALDNYLRICGK
                     TTYSMTMNVIIALSNIVLDYIFIVVLGWGLFSAALATCLGLMLGGIFGIFPFLFQNLE
                     LKFSSLYMNMKIFKNIVYNGSSEFFGNISGSLYGIFANLVLLKISGTQAVAAFSIVSY
                     IDNFIIMLIIAMGDAMQPALSYNYAKKDFSRIKDILKVMFFAGAILSLLSVAMIFVLG
                     KDLVGLFTQENDQEFIIFAYMALMLFSFNYLFAWFNVLSGSFLTASNKASFSLILSLS
                     QNLFIPLCFLLILSSIMGLKGVWLSPFFAEFCVLVLACIFVRKVFKKLSFL"
     gene            complement(16864..17793)
                     /locus_tag="R8X70_000980"
     CDS             complement(16864..17793)
                     /locus_tag="R8X70_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HEF2928764.1"
                     /translation="MKKTLFSFALASLFVSQASSIEFQSGLSGNLSLGVGVRDVKSNI
                     SPLANSDYLSGYNADNSDTAAIPFIGLELYYGNLIDNDRVFLKNYNGRDLSGIALGYE
                     RAYLERFSTSFSFISSLREKAYANPYFIGNREETDVSKYGFRISQLYESDFGKFNASY
                     VFAKNKLDKESIEFASLKREGNYHELELSYNYSLLNLGLNYDYNDADGKAQSYSRYGF
                     KIGTHLVFARNYILTPSLSLNQYKADGTDPIFNQKQDGSITKFNLKLVKNQFLGYNSL
                     YGFTNYGLEKRNSDIDFYDETYHILLTGVGYKF"
     gene            17935..19308
                     /locus_tag="R8X70_000981"
     CDS             17935..19308
                     /locus_tag="R8X70_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEF2928765.1"
                     /translation="MQQEHFDLDLERAILSSCIMSEDAYSSIAGDIEPKDFSLKAHQD
                     VFKAIIACVNAGEPISISFLKKHKKIDEQILTEIIATPSIIDLPAYVNELREKSIKRQ
                     LLSFAHLLPTRINDNRAVSEISDEIGKEIFNITNRVNTNDIKDIEIVLSELLEEFKKQ
                     KSLENKSVIGLDTGFEDLNTMTKGFKGGELIIIAARPGMGKTTLCLNFIEKVLRQDKG
                     VVMFSLEMPAAQIMQRMLSAKTSIPLQKILTADLNDNEWERIGDACNYYSKKKLFIYD
                     SGYATITDVRAILRRLKAQEESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRSLEQRANKRPMMSDLRESGAIEQDADTILFVYRDEVYREQDEK
                     ERENKAKAEGKPYQRNFIPNPMQENAEILVGKNRNGPVGVVEVLFLKEKSCFVDKPRF
                     ESVEFQE"
     gene            complement(19376..19582)
                     /locus_tag="R8X70_000982"
     CDS             complement(19376..19582)
                     /locus_tag="R8X70_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928766.1"
                     /translation="MKITTKTLLNGNKLAIIFLIFLAPNLAFGVESAEGVLSIIHNGL
                     LSWTPLIKTACLWVFWTLVIIDLV"
     gene            complement(19545..19823)
                     /locus_tag="R8X70_000983"
     CDS             complement(19545..19823)
                     /locus_tag="R8X70_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HEF2928767.1"
                     /translation="MKHFIFSGLIGLGALAFLAGCGDEAKTSDYYKAHLDEAKARVAE
                     CKKMEKMNETQQRDCSNAKWAVEMQTDNRVPYGIGKNENYNKDALKWK"
BASE COUNT         7144 a         2735 c         3772 g         6817 t
ORIGIN      
        1 aaaacttttt tgctgatcat attgctatga tcgagctttt agaaaaacaa ggttttaatg
       61 aaatggatat gaaaagcttt atacttgaaa atggagattt tattcaagaa aggcaaaacg
      121 atctttttat agaattaggt gctaaaattt taggacatga gggttaatga gcattaggct
      181 tttggttttt tttactttga tggcaaattg cattgtttta aatgctgctc ctgtttttga
      241 ttatacatat aaatttacac ttaaaaaaga cgagagagct agcgtggaga ttaaagagct
      301 tggttatgat aatggggttc aaaattttga tttttattgg actttgtttg ataataccaa
      361 tatagtcgtt cattctaaat ttcgtaaata tccgcgtcaa tttgtgatga gtttaagaag
      421 aaatttggac tgggtaaccc aaactttaat tcctgattat aaaaatccac atattgatag
      481 agcaaggctt attttagaat ttagcgaata caaaaaaggt gaggcaattt ttactgtgta
      541 tatagaagat aaggattcta gacttgaagt gaaatttctt gatccaagaa aaatgcaatt
      601 aacaaatcca cctcaaaata atcaagtagt gcctatgata gattttaatg agcctcaagt
      661 agaaccattg atacaacgag aaaataccac aaactaaatt tgaaggatat agggtgcagc
      721 caatagatga tttgataaaa caatatttgc aagagcttga ttatgaacct attttaacta
      781 tgcttgctaa taccaaatca ggcaaaaaat tgcgttcaaa gctactttta gcaatcgcag
      841 gagaaaatgc aaattcttat aaaatttgtg ccgcaataga acttatacat ttagcaagtt
      901 tgttgcatga tgatatcata gatgaaagca aattaagacg tggtgcaaag tctgttaatg
      961 ccgaatttgg tacaaaaaac gcccttatgc ttggagatat tttatattca aaagcttttt
     1021 atgaattgag ccaactagat gcttgttttg caagtattat ttcagatgcg gttgttaagc
     1081 ttgctgtagg cgagcttatg gatgttgagc ttagcaaaag ttttaatgcg gataaagata
     1141 aatatctaaa gatgatttat aataaaaccg cagttttaat cgaagcaagt gcaaggtgtg
     1201 gggctatttt ggcaaattta gatgaaaaag cttttggaga atatggcaaa aatttaggtc
     1261 ttgcatttca aatgattgat gatattttag acattaaggg cgatgaaaaa acccttggaa
     1321 aacctgctat gaatgatttt aaagagggta aaaccacttt gccttatatt tatctttatg
     1381 aaaatttaaa taatgaggat agggctcaat taaagaattt atttcaaaaa gatttaaaca
     1441 atgatgaaaa aatttggata caaaccaaat ttgaagaaac aaaagcttta aataaagcta
     1501 tattggaggc taaagaatat gcccaccaag cagcactagc tataaaagat ttttccaatg
     1561 aaaaacttca agatataatt caagctatga tagataggga tttttaatgt attattgcat
     1621 atcttttact cataaaaata cagatctttc tttaagggag agattgagtt tttcagatga
     1681 agcaaaaaaa aacgagtttt tgagattgct aagcattcat gaaaatattg aagaatgttt
     1741 ggttataagc acttgtaatc gtgtagaaat agtagcttat gtaaaagaag cttgtgcaga
     1801 atatattatt aaatccttag ctttattatg caatgtagat aaagaaagct tagttcaaaa
     1861 agctgatatt tttgaagata gcggagctat tcatcatctt ttttcggttg caagctcact
     1921 tgatagtttg gttgttggag aaacacaaat cgcagggcaa ttaaaagatg cttttgcttt
     1981 tgctttaaaa aataattttt gcgcggtaca tctttcaagg gcaattcaca gtgcatttaa
     2041 atgcgcagct aaggttcgta atgaaaccca aatttcaaaa aatcctattt cagtcgctag
     2101 tgtagcagta gctaaggcta aagaactttt gcctttagat ggaaaaagtg ctatagttat
     2161 aggtgcgggt gagatgggag agcttgcagc caagcattta atcactgctg gagctagagt
     2221 tatagtgtta aacagggata tggaaaaggc tcgtatcctt tgtgagagat tgggtgtttt
     2281 aagcgagtgc gatagcttaa ataatttaaa aaaatatctt gatgagtatg aacttttttt
     2341 ctcagctacc aatgccccaa atgctattat tacaaattct ttaatcgatg aggtctctca
     2401 taagagatat ttttttgata ttgctgtgcc acgagatatt tatattagtg aaaatgaaaa
     2461 aatatcagtt tttgcggtcg atgatcttga agttgttgtg cgaaaaaatt tagccttaag
     2521 agaacaagaa gcgcgtatgg cgtatggtat catcgggcgt gagacagcag aattttttag
     2581 atatttaaat gatttagctt taactcctat tataaaagcg attcgcttgc aagcaaaaga
     2641 atgtgccaac aaacagcttc aaatcgcttt agataaagga tatttaaaac attctgatga
     2701 agaagaggca agaaaattaa tccatcaagt ttttaaagct ttcttgcata ctccaactat
     2761 gaatttgaaa catttgcaag gtaaaatgca aagtgataca gtgattaatg ccatgcgtta
     2821 tatttttgat ttggaaaata atcttgaagg tttaaatcaa tacacatgcg aatttaatat
     2881 ggagaataat gatgaaattt agtaaattat atgcaccaag tcttaaagag gctccaaaag
     2941 atgcgacttt accgagccat atttttttaa cacgcgctgg ctttgttgag caaattggta
     3001 gtgggcttta taatttttta cctttgggaa aaagagtatt ggataaaatt cgcactattg
     3061 ttaaggaaga aatggataaa gcaggagcac aagaggtaaa tttaagcttt gtgactccag
     3121 cgactttatg gcaagaaagc gggcgttata atgtttttgg taaagagctt ttgcgtttta
     3181 aagatagaaa agaaaatgat tttgttttag gcccaacgca tgaagaggct atgctttctt
     3241 tggtaaaaaa taaaatcaca tcttataaac aacttccttt gcatttatat caaatagggc
     3301 ttaaatttcg tgatgaagca agaccaagat ttgggctttt aagatgtcgt gaatttttaa
     3361 tgaaagatgg ttatagtttt catgcaaatg aagaagattt aacgcgtgaa tttgatttga
     3421 tgtataacac ttattcccaa atcttgcaaa gaatggggct tgattttaga gcagttgaag
     3481 ctgatagtgg ggctattggt ggaagtggtt ctaaggaatt tatggttttg gcaaaaaatg
     3541 gtgaggatga tattttaatt tgtgaaaatt gtgattatgc tgcaaatgtt gaagctgcaa
     3601 aaagagctaa aaaaacttgt caagatgagc gtcctgaggc aaattacgca agtaaatttc
     3661 acactccaga tattaaaacc atagaagctt tagcgcaatt tttcaaaatc aatgcttttt
     3721 atactatcaa ggctgtggtg aaaaaagcta tttatgaaaa tgaaaataaa ttagttgtgt
     3781 tttttatacg cggttgcgat gatttacaag aaaccaaagc gcaaaacgct tgcaatgctc
     3841 ttgagcttgt ggatgcgagc gaagaagaat tagaaaaagc gggattggtt gcaggtttta
     3901 taggctttgt gggtttgaaa aatgttgatt tttatttgga taaagagctt gaaggcgaaa
     3961 aacaaatgat aatgggagca aatgaaaaag attatcattt aataggcatt gatgtagtta
     4021 atttaaacaa agatcgcttc aaggatttag cagaggttaa agaaaatgat tgctgtgcta
     4081 aatgtggtgg aaaattaaaa ttaagcaagg gtatagaagt aggacatatt ttcaaattag
     4141 gacaaaaata ttctaaggct atgaatgcaa atttcttaga tgaaaatggc aaaagcaagc
     4201 ctttttacat gggatgttat ggtataggag tttcgcgttt acttgcagta gcaattgagg
     4261 caaatcatga tgaaaagggt tgtatttgga ataaaacctt agctcctttt acgcttgaaa
     4321 ttataatttc aaatatcaaa gatgagaagt ctttggaatt tgctaccaag ctttatgagg
     4381 atttaagcaa tgcaggtatt gaagttttac ttgatgatag aaatgagcgt tttggtgtta
     4441 agatgaatga ttttgagctt ataggctttc cttatgcttt agttgtaggc aagggcttag
     4501 aaaaggatga attagaattt atagatagaa aaacactaga gaaaaaaatc atatcaagta
     4561 aagaagcttt tgattttatt aaaaagagta tagaatgaat tataaactta gccttagtcc
     4621 gcttttttta ctagaacttg ttgcaagtat tttatttatt gtattttttg gtttgggaaa
     4681 ttttttaata tttattttag ctagtatgat ttttggagta attttgctcg gaattttttg
     4741 gaaaaatatg cttgaatttc gtataagcgg ttttaaagat atgttgactc aatttgcttt
     4801 tgtaatggcg gcttttttgc ttatctttcc aggaatagta acgagtattt ttggattttt
     4861 tgttttgtgt tttggtttga tttttaattt tgctaagcct agatataaaa gaaactacag
     4921 acaaaataac acttctgatg aagaaattat cgatgttgaa attatagagg agagaaaatg
     4981 aaagagcttg ttatagctac aagaaagagt caattagctc tttggcaaag tgaatttgta
     5041 gcagattttt taaataaaac tcatggcata gcagttcgct tagaaggctt taaaaccaaa
     5101 ggagatgttt tgttagatag cccactagca aaaataggtg gtaaaggact ttttactaaa
     5161 gaactagaag aaagtatgct aagaaatgaa gcgcatttag ctgtacatag tttaaaagat
     5221 gtaccgagct tttttccaca aggtttgatt ttggctgcag ttagcaaaag agaacaaagt
     5281 aatgatgcga tgttgagtca aaattataaa gattttcttt ctttgccaaa aggcgcaaag
     5341 ataggcacta caagccttag acgcaaaatg caacttttat tattaagacc tgatttggaa
     5401 atcatttcct tacgtggcaa tgtgaattct cgtatagaaa aattaaaaaa tggggatttt
     5461 gatgcgatta tcttagctat ggcaggcatt aagcgtttgg atttagacaa acaagtgaat
     5521 tttgtttatg catttagcaa agatgagctg atcccagcag catctcaagg ggctttgggt
     5581 atagagagta cagatgatga aaaaatttta gaatttttaa agtgtttaaa tgatgataat
     5641 gctttgatag aaactaccat agaaagagaa tttatcgcta ctttagaagg aggatgtcaa
     5701 gtgcctattg gtattaatgc agaacttcta aatgatgaga tttgtgtgcg tgccatactt
     5761 ggtttgcctg atggtagtga aattttaaaa gaaaaaagaa tgatcaaaaa aagtgatttt
     5821 aaaggctttg gcgaaagttt agcgaaagaa tttatcgcca agggggctaa agaaattttg
     5881 aaaaaagctg aaagtatgat atgaaagatt ttattaaaat tctaaaagac aatgatttac
     5941 taaaagtgta tgaagaacct gtagatgtag atcttgaaat cgcccattta gcttatatag
     6001 aagctaaaaa aggtgaaaat ggcaaggcct tgctttttaa aaatcccata gataaacaaa
     6061 acaataaaca atataaattt cctgttttaa tgaatgcttt ttgtaatgaa aaagcattaa
     6121 atttggcttt tggacgagat tataaagagg tagctgatga aatttcaaag ctaaccaaac
     6181 ttcatattcc tactagtttt aaagcaaaaa tagatttttt tatgaattta ttaagtctta
     6241 aaaatgtccc acctaaaaga ttaaaagcag ataaagcttt gtatgattat gagcttttaa
     6301 attctcttga agaacttcct atacttaaga cttgggaaga agatgcgggt agatttatta
     6361 ctatggggca agtttataca caaaatttag acaaaaccca aaacaatctt ggcatgtatc
     6421 gtttacaagt tagcgataaa aatgagcttt taatgcattg gcaaattcat aaagatgggg
     6481 caaattttta tcatgagtat aaaaatgctg gctttaaaaa aatgcctgta agtatagcta
     6541 taggcggaga tcctctttat atttggtgct ctcaagcacc tttacctaag ggaatttttg
     6601 aacttttgct ttatggtttt attaaaaaaa ctccagctaa gctgacacct tgtgaaaatg
     6661 gtattttcgt gccttataat agcgatatag tgatcgaagg ctacgtggat ttagaagagt
     6721 ttaaagtcga aggacctttt ggcgatcata cgggttttta tacccctgca gagctttttc
     6781 ctgtgatgaa ggtagaaaaa atttatgcta aaaaagaagc catctatcaa gcaactgttg
     6841 tgggaaaacc gcctttagaa gataagatta tgggacttgg gactgaaaga atatttttac
     6901 ctcttttgca aacttcagtt cctgatttaa tcgattataa aatgcccgaa aatggggttt
     6961 ttcataatct tatcttggca aaaattgatg caaaatatcc cgctcatgca cagcaaatta
     7021 tgcatgcttt ttggggagtg gggcaaatga gctttgttaa acatgctatt tttgtagata
     7081 aaaaagctcc aaatttggat gattatgatg cattaatatc ttatatttta aatcgtttta
     7141 atacaaataa aattttaatt tctgaaggaa tttgtgatca attagatcat gcttcgccta
     7201 attcttgctt tggaggaaaa gcaggacttg atgcttgtga agaagccatg gtagaagagc
     7261 ttgaaatttt agaagatgaa aaattattag aactttttac aaccaaaata gagcctgtta
     7321 atttaaaaca attttacaaa gaaagcaaaa gccctatagt ttgtattttg ctagataaaa
     7381 aagaaaaaat agagcaaagc tttgaaaaac ttttggaatt taaaaaacat tttagaattt
     7441 tagtattttt agattccaat aacaaacttg aaaatcctta tatgcttgta tggcgtgtgg
     7501 taaacaatat agacgctaaa agagatattt ttatcaaagc tgatagagta ggtgtcgatg
     7561 ctagtgccaa gggcttagta gagggttatg aaagagtttg gcctaagcaa actgattgta
     7621 ctaaaagcgt gattgaggat ttgattttaa gaaatatttt ggaaaataac tcagaacttt
     7681 tttcaaaatt tgaaattcta ggttagttct atcttaaatt cagcttttta ataactcttg
     7741 gtacactttt tgcttgttat ttttttataa tgaaaaataa atttttcttt ataaagtatt
     7801 cataaattta taattttgtc gatatagcct ttaaatagca atattaaatt ttaaaaagga
     7861 ttttaaaatg gaaatatcaa aggcaaatgg acagttagat gcagcttttg cgaatttagg
     7921 tcaaagagca agtggagtgc atcaaactta ttcagatatt caagctggag aaaataaaag
     7981 ccaaggaggc gatgatggac agcaacgagg tgtgagtgaa aaattagctg atattacaaa
     8041 aaaactaaat gagcaaatgg attctctaga taccaatgtt cgttttggtt atagtgataa
     8101 aatcggttct atgtatatta gcgttacgga aaaaagtact ggaagggaaa tccgtcaaat
     8161 tcctagcgaa gaagctataa gattagctga gtattttagg gatgtgatag gaatgatatt
     8221 tgataaggag agttaaaaat ggcatttggt agtctatcta gtttaggatt tggttctggg
     8281 gttttaaagc aagatactat agataaatta aaagaagcag agcaaaaagc tcgcattgat
     8341 ccttatgcta aaaaaattga agaaaataca accaaacaaa aagatttaac agaaatcaaa
     8401 actaaattac taagttttca gacggctgtt tcatcattag ccgatgctac ggtttttgcg
     8461 aaaagaaaag ttgtaggtag tattaccgaa aacccacctg cgagtttgac tgcgaacagc
     8521 ggggtgtcct tgcaaagtat gaaggtcaat gtaactcaaa tcgctcaaaa agatgtgtat
     8581 caaagcaagg gacttacaaa cgattctggt tatgtcaatg caaatttaac aaaggctacg
     8641 gatttgacct ttttttctaa tggcaaagaa tataccgtaa gtgtagataa aaacacgact
     8701 tataaggatt tagctgataa gattaatgaa gctagtggag gagagattgt tgctaagatt
     8761 gtaaacacag gagagaaagg cactccttac cgcttaactt taaccagtaa agaaacaggc
     8821 gaagatagtg cgataagttt ctatgctgga aaaaaagatg cgcagggtca gtatcaaagt
     8881 gatctagagg cagaaaaaat attttcaaat cttggatggg aattagataa aacgagttct
     8941 attgatccag ctaaggataa aaaaggttat ggcatcaagg atgcttcttt gcatatccaa
     9001 actgcgcaaa atgcagaatt tacacttgat ggtattaaga tgtttagatc aagtaatact
     9061 gttaccgatc ttggtgtagg aatgacttta actttaaata aaacaggtga aattaatttt
     9121 gatgtacagc aagattttga aggtgtgaca aaagccatgc aagatttggt ggatgcttat
     9181 aatgatttag taaccaatct taatgctgca actgactata atagtgaaac tggaacaaaa
     9241 ggaactttac aaggcatcag tgaagtaaat tcaatacgct caagcattct tgctgatttg
     9301 tttgattctc aagttgttga tggaactact gaagatgcaa atggtaataa agtaaacact
     9361 aaggttatgc tttctatgca ggattttggc ttaagtttaa atgatgcagg cactttgagt
     9421 tttgattctt ctaaatttga acaaaaagtt aaagaagatc cagactctac tgaaagtttt
     9481 ttttcaaata ttactaaata cgaagacatt aatcacacag gagaggtaat taagacagga
     9541 agtttaagta aatatcttaa ttccaatgga ggtaatacta atggtttaga atttaaacca
     9601 ggagatttta ctatagtttt taataatcaa acatatgatt tatctaaaaa ttctgatggt
     9661 actaatttta aattaacagg gaaaacagag gaagaattgc ttcaaaattt agctaatcat
     9721 ataaacagta aaggtattga aggcttaaaa gttaaggttg aatcctataa tcaaaacaat
     9781 gttacagggt ttaggttgaa ttttagtgga gatggtagct cggatttttc aatcaaagga
     9841 gatgctaaca ttctcaagga attaggtttg tctgacgtaa atataacctc taagcctata
     9901 gaaggtaaag gtattttttc aaaattaaaa gccacgttgc aagagatgac tggaaaagat
     9961 ggttcaatta caaaatatga tgagagtttg acaaatgata ttaaatcatt aaatacctct
    10021 aaagactcga ctcaggctat gattgataca agatatgata caatggcgaa tcaatggttg
    10081 caatatgaga gtattttaaa taaactcaat caacagctaa atactgtgac taatatgatt
    10141 aatgcggcaa acaattctaa taattaagga taaaagagat gcaaaataat ttagcctata
    10201 atgcttattc tcaaaatcaa gtggggatag agtctccgca aaaacttatt gaaatgcttt
    10261 atgagggaat tttgcgtttt tgtgcaagag ctaaagtagc cataagaaat gaagatatag
    10321 aacaaagagt gtattttgta aaaagaacca cggctatttt tatagagctc attaatactt
    10381 tagattatga aaaaggcgga gaagtggcac attatcttag tggtctttac acaagagaaa
    10441 ttcagctttt atctttggca aatttggaaa ataatgaagc aaggattgat gaggttatta
    10501 atgtaactaa aggcttgtta gaagcttgga gagaagtgca taacaatgaa gcaatggctt
    10561 agtgatttta aacttgcgct catacaagag gatgttaata agcttgaaag tttgctaaat
    10621 gcgcttgatt taaaaaaaat gcttgaagat cttgcaagag attttcaaaa tgatgagcta
    10681 aaagataaat taaatgacaa tttaggacaa attaaagcgc ttttacaaga agcagttgtt
    10741 ttaataagtg caaaaaagaa ttctaaggct tgtgaaattc aaaaaattca aaaagcttta
    10801 aaatatttta aagcatagtg ataagccgag ttctgtctag aatgctcatt tatctagttt
    10861 tgttttcgca aacaaaatca agcgaagggt taaaacaaag accttaacca tcccttcttg
    10921 ctgcacattg ggtttacata gccgaaattg ttgccaaaat cgctggtaag cttttacctc
    10981 accgtttcac cttttccact tttgtggtag ttttctttct gttgcactgt cccttaggtc
    11041 gccctagcca tccgttagat ggaatgtttg tcttttgcag ctcggacttt cctcttcttt
    11101 ttttaaagaa gcgagcattt actatgcttt aaaactaaat tctaacaaaa aaatgcttat
    11161 tttattatca attatattgt gatatcaaat aatttttgtt agaattataa tttattttta
    11221 atataaaagg aaaattatgg catcttattc aatgggtgat ttaaaaaaag ggcttaaaat
    11281 cgaaatcgat ggaattcctt ttaaaatagt tgaatatcaa catgtaaaac caggaaaagg
    11341 tcctgctttt gtgcgtataa aaatcaaatc ttttattgat ggtaaggttt tagaaaaaac
    11401 ttttcacgca ggagataaat gcgaagctcc aaatttggaa gaaaaaacta tgcagtatct
    11461 ttatgatgat ggagaaaatt gtcaatttat ggatacagaa tcttatgagc aagttgcaat
    11521 cagtgatgaa gatgtaggcg aagcaaaaaa atggatgctt gatggtatga tggtggatgt
    11581 actttttcac aacagcaagg ctattggcgt ggaagttcca caagtggtag aacttaagat
    11641 tgtagaaaca gcaccaaatt ttaaaggtga tactcaagga tcaaataaaa aaccagctac
    11701 attagaaaca ggtgcagtag tgcaaattcc ttttcatgtt ttagagggtg aagttatacg
    11761 cgttgatacg gtgcgtggag aatatatcga aagagctaat aaataaaatt tttacgcgta
    11821 cagatttttt taagcgcgtt tgattttatc gcaaaaaata aatatcaaat tcagcaagtt
    11881 tgtataaatt aagatattta tgtaagattt taaaatatat tatttcagct tttaatgcat
    11941 gcaagcttaa aagctgaatt taaagaatta tttacttgtc aattttactc taaaaatgta
    12001 ttttgcaatg tattcaaaat attttcttaa ataagcccta tgaataacaa aacctcctaa
    12061 aagtcctaaa agactgccta tgataatatc ttgtaagcga gcgtgtatta acatatcaac
    12121 acttaagttt ccaaaagaag ccgcctctgc caaataggtc acataaggtg taagaaaaat
    12181 gacagctaag gcatagtttc taactactaa aaattcaatt ataaaggcta aaaacatcat
    12241 taaaaagata aattctaaag gagtgaattt aattcttaaa agccactatg caaataaaat
    12301 tccaactgtt gttccaagaa tgcgttgaag ttgttttatc caaactgaat ttaaattagt
    12361 cccttgtaag ataaccgttg tgctaactgc aacccaataa cttcgatcaa attctaaaaa
    12421 tgttcctaaa aacacagcaa agccaacaaa aaaagcaata attatagaat ccacaaagat
    12481 aacatcaaaa cctaaatttc cattttttaa aacgggtttg ggtggagaat ttttaaaaat
    12541 ataaatgaca gatacagagt ataaaaaagc agttatatta gcaatgatac cgcctataca
    12601 gtcccactag aaaaatataa tcttttggcg gaaaaggaaa aaatgaagct agtaaacagg
    12661 aaaaaacgaa gaaaaaatat cctggcgcgc ctatattata atagcgtatc aaaatagagc
    12721 tagccatagc tactaagcca actacaagcg gagagaatgc aggaaaaaaa atgcgtgcaa
    12781 agtcctatta aaaaagacaa acacaaacca aaagagcagc acattgtaac agtcattcta
    12841 tgatacatag gtgtattggt tgtataaaca aaagccataa ttcctattat agcaattaat
    12901 cctaagtcca tacgatcata atatgcagca atactaagcg caaatccaac tgctaaggca
    12961 aagaaaaaag gcatttgcca aactctttcg gttggattaa gttgtatgat ttctttacat
    13021 tgttgtttta aaatttttct tttactcatt ttcttatctg tccttctcca ctgattaagt
    13081 atttataggt gcaaatatct tcaactccca taggacctct tgcatgaagt ttgcttgtgg
    13141 aaattcctac ctctccacca aagccaaatt cacccccatc actaaaacga gtcgaggcat
    13201 tgacataaat acaagatgag cgtagaaggc gttgaaattt gcctatgttt aaagcattgt
    13261 ttgagattat ggtttcagag tgtaaagagc tgtgttggtt gatatgctct atagcctcat
    13321 cacaatcttt taccgatttt atactgatag cataatcaag ccattctgta tcaaaagtgc
    13381 tttcatcagc ctttgaaatt tctaattttg agtttttaaa atgttctaag atattttcat
    13441 gtgcgtgaat ttttacctta aatttttcaa attcagggat taaaagcttt ataaaatctt
    13501 tagcaatttt ttcatggatt aaaagggttt ctagagcatt acaaacgctt actctttggc
    13561 attttgcatt aaggatgatt tctaaagcca tatttaaatt tgcactctca tccacaaaag
    13621 catgacataa gcctttatct tgtttaatga gtggaatttt tgtatgacta gcaatttctt
    13681 gtatcatgtt tgaacttcca cgagggatga tcacatcaac caaatcatca aaagctaaaa
    13741 tttgcatgat ttcatttctt tcataaaaca taacaaaaca atcttgcaaa ttaaactctt
    13801 ctaacacttt ataaacaaga tcaaatatgg ccgaatttgt aaattttgcc tcactgcctc
    13861 ctttaagtac gcaagcattg gagcttttta tcattaaagc gatgatttca gcacttaggc
    13921 ttggtcttgc ttcataaatc acactgatta atcctatagg aatgctgatt ttttctatct
    13981 ttaagcccgc ataattaacc cagcctttag aaattttacc tataggatct tctaaataag
    14041 caatcttttc caaagcatca caaagagaaa aaatgcgttt ttcatctagt aaaagtctat
    14101 ctcgcattgc tccgcttttg gtaaaatttg tcatgtcttt ttcattggct tctaatatga
    14161 ttttaaaatt ctctcttaaa gcacaagcta atttcaatat aatattttct ttatccttgg
    14221 gagttaaatt gagcagtttt tgagaatttt tcttaatatt ttcaagtaaa tttcgcattt
    14281 ttaatccttt atttacaaaa aacttgataa attatacaaa aaaatttaga attgaaaggt
    14341 aaatttgaat gaaaaaagta gatttaattg tagtaggtgc agggccgaca ggaattggtt
    14401 gtgcagttga agctaagctt aaaaataaag aagttttggt attagaaaaa tcaaacaata
    14461 tttgtcaaac tttgatgcag ttttataaag atggcaaaag ggttgatatg gcttataagg
    14521 gttgtgaagg cacaaatcac ggacatgttc cttttcaaga tggaaccaaa gaaagcacta
    14581 tagagacttt tcaaaatgct ttaaatgagc ataaaataga agttgagttt ggctctgagg
    14641 tagagagtgt gaaaaatgaa aatggagtat ttttagtaag tacaggcaag ggtgtttatg
    14701 agtgtaaaaa tatcatcgta gctataggta gaatgggtaa gcctaataag cctgattata
    14761 aacttcctat aactttaaca aagattatta atttcaatgc taattctgtt ttaggtgatg
    14821 aaaaaatcct tgttgtagga ggcggaaatt cagctgcaga gtacgcagta gatttagcta
    14881 attctaataa agtaagcctt tgttatcgca agaaagaatt tacaagatta aacgatatca
    14941 atcttaaaga tattcacgaa gctggaaatt caggcaaagt agaattaaaa ctcggtatag
    15001 atatagaaga acttgaggat gataatggta aagctaaggt gaaatttaac gatggcagca
    15061 acgagactta tgatagaatc atttatgcta tcggtggttc tactcctctt gattttttac
    15121 aaaaatgcgg aatcaatgtc gatgataaag gagttccttt aatggatgaa aataaacaaa
    15181 gcaatgtaaa aggtattttc gtagcagggg atatcgcaac taaaaatggc gcaagcatag
    15241 taacaggctt aaatgacgct gtaaagatac ttgccgtaat ttaatcaaat ttggcccttg
    15301 ggctgaattt gacttattaa actttcaata ttataatttc tttattatat tttaattttt
    15361 aaatattatc atgcaaacac aagataaaaa caataaaaaa atcataccga tagaaaccta
    15421 tcgcttagct ttctacatac taggacttca aacactctat tagctccttt taagatattt
    15481 gtgttgttaa atattttaaa ggatttttta tgtcaaatat ttttagcacc ttaagccctt
    15541 ttaggctttt tgttaaatgt gctgtgccta atgtaataag catggcattt atttcttttt
    15601 attatattgt tgatggaatt tttgttggaa aatatctagg aaatgacgct ttagcagctt
    15661 tggccttgat tattcctttt attatgatat cttttgcttt ggctgatatg atagccattg
    15721 gttcagctgt gcaaatttct atgcatttag gacttgggaa gaaacattta gctagaaaaa
    15781 tctttagttc tagtatgtta attatcttcc ttatttcatg tttagtaggt attttagaat
    15841 atcttttgag tcctgttttg atcgattttt tagatgtaaa tgaagatatc aaatcaatgg
    15901 caaaagagtg tatgcttgta tttgctttgt tcgccccctt tactatgtgt tcttttgctt
    15961 tggataatta tcttagaatt tgcggaaaaa caacttatag tatgacaatg aatgtgatta
    16021 tagcattgag taatatagtg cttgattata ttttcatcgt tgtgttaggt tggggcttgt
    16081 tttcagcagc tcttgcgact tgcttggggc ttatgctagg cggtattttt ggaatttttc
    16141 cttttttatt tcaaaattta gagcttaaat tctcaagttt gtatatgaat atgaagattt
    16201 ttaaaaacat agtttataat ggaagcagtg aattttttgg caatatctcg ggttctttat
    16261 atggtatatt tgctaattta gttttgttaa aaatttcagg cactcaagca gttgccgctt
    16321 tttctatcgt ttcgtatatt gataatttta tcattatgct tattatcgct atgggtgatg
    16381 cgatgcaacc tgcattaagt tataattatg ctaaaaaaga tttttcaagg attaaagata
    16441 ttttaaaggt aatgtttttt gcaggtgcga ttttatcttt attgtctgtt gcaatgatat
    16501 ttgttttggg taaggattta gtaggattat ttactcaaga aaatgatcaa gaatttatca
    16561 tttttgctta tatggctttg atgttgtttt cttttaatta tctttttgcg tggtttaatg
    16621 ttttaagtgg ttctttttta acagcgagca ataaagcgag tttttctttg attttaagct
    16681 tgagtcaaaa tctttttatt cctttatgtt ttcttttgat tttatcttct atcatgggct
    16741 taaaaggagt gtggcttagt ccattttttg ctgaattttg tgttttggtt ttagcttgta
    16801 tttttgttag aaaagtcttt aagaaactat cgtttttata aggatagttt ctttggattg
    16861 attttagaat ttatatccta cacctgtaag taagatgtga tatgtttcat cgtaaaaatc
    16921 tatatcgcta tttctttttt ctaagccata atttgtaaaa ccataaagtg agttatagcc
    16981 taagaattga ttttttacga gcttgagatt gaattttgta atgctaccat cttgtttttg
    17041 gttaaaaata ggatcggtgc catctgcttt gtattgattt aagcttaggc ttggagttag
    17101 gatataattt cttgcaaaaa ccagatgtgt tcctatttta aagccatatc ttgagtagct
    17161 ttgagccttt ccatcagcat cattataatc atagtttaag cctaaattta ataaagaata
    17221 attatagctt aattctaact catgataatt tccctctcgt ttaagagaag caaattctat
    17281 actttcttta tctaatttat tttttgcaaa aacataagaa gcgttgaatt ttccaaaatc
    17341 actttcataa agttgtgaaa ttctaaagcc gtatttactt acatcggttt cttcacgatt
    17401 gcctataaaa taaggattag cataagcttt ttctcttaaa gatgaaatga aagaaaaaga
    17461 agtgctaaag cgttctaaat aagctctttc ataacccaaa gcaataccgc ttaaatccct
    17521 tccgttgtag tttttaagaa atactctatc attatcgatt aaattgccat aataaagctc
    17581 aagacctata aaagggatag cagctgtatc agaattatcg gcattgtatc cgcttagata
    17641 gtcactattt gctagaggtg agatattgct cttaacatct cttacaccta ctcctaggct
    17701 taaatttccg ctaagaccac tttgaaattc tatggatgaa gcttgactta caaataaaga
    17761 ggccaaagca aaagaaaata aggttttttt caagataaac tccttgatag tttttataat
    17821 tagaaatttt attgtaacta atattacttt aattttttat aaaaagctta tgtgaatttt
    17881 tagattcttt tagataaaat ctttcaataa attttactca aaaaaggaaa ataggtgcag
    17941 caagagcatt ttgatttgga tttagaacgt gcaatcttaa gtagttgtat tatgagtgag
    18001 gatgcttatt ctagtatagc aggagatata gaacctaagg attttagtct taaagctcat
    18061 caggatgttt ttaaagctat tattgcttgc gtgaatgctg gagagcctat atcgattagc
    18121 tttttaaaaa agcataaaaa aatagacgag caaattttaa ccgagattat cgcaactcct
    18181 tcgataatag atcttcccgc ttatgtcaat gaacttcgcg aaaagtcgat taaaagacag
    18241 cttttaagct ttgcccatct tttgccaaca aggatcaatg ataatcgcgc agtcagtgaa
    18301 atttctgatg aaatcggcaa ggaaattttt aacatcacca atcgtgtaaa caccaacgat
    18361 atcaaagata tagaaatagt cttaagcgag cttttggaag aatttaaaaa acaaaaaagc
    18421 cttgaaaaca aatccgtgat aggacttgat acaggatttg aagatctaaa tactatgact
    18481 aagggtttta aaggtgggga gcttatcatc atcgcagcgc gcccaggtat gggaaaaaca
    18541 actttgtgct taaattttat agaaaaggtt ttaagacagg ataaaggagt ggtgatgttt
    18601 tcgcttgaaa tgcctgctgc tcaaatcatg caaagaatgc tttcggcaaa aacttccatt
    18661 cctttgcaaa aaatcttgac tgcggattta aatgataacg aatgggaacg cattggcgat
    18721 gcttgcaatt attattctaa aaagaaatta tttatctatg atagtggtta tgcgactatt
    18781 acagatgtaa gagcgatttt aaggcgctta aaggctcaag aagaaagtat agggctttgc
    18841 gtgatcgact atatagggct tatgatgagt aattctaatt ttaatgatag acatttgcaa
    18901 gtcagcgaaa tttcaagagg gcttaagctt ttagcaaggg agcttgatat gcctatcatc
    18961 gcgctttcac agctcaatcg ttctttagaa cagcgtgcaa acaagcgtcc tatgatgagt
    19021 gatttacgtg aaagtggggc tatagagcag gatgcggata cgattttgtt tgtatatcgt
    19081 gatgaggttt atagggaaca agatgaaaaa gagcgtgaaa ataaagcgaa agccgaaggc
    19141 aagccttatc aaagaaattt cattcctaat cctatgcaag aaaatgctga aattttagtc
    19201 ggcaaaaata gaaatggtcc tgtaggggtt gtcgaggttt tatttttaaa agaaaaatct
    19261 tgttttgtgg ataagccacg atttgagagt gttgaatttc aggagtaggg attaactcta
    19321 taggtcgagc ttaatttgcc ataaagaaat ttagaaagag aacaaagtca aaagtctaaa
    19381 ctaaatcaat aataactaaa gtccaaaata cccataaaca agcggtttta ataagaggcg
    19441 tccaagataa aagcccattg tgtattatgc ttaaaacgcc ttctgcactt tcaaccccaa
    19501 aagctaaatt tggagcaaga aaaattaaaa aaataatcgc tagtttattt ccatttaaga
    19561 gcgtctttgt tgtaattttc attttttcca attccgtaag gaacacgatt gtcggtttgc
    19621 atttcaactg cccattttgc attagaacaa tccctttgtt gagtttcatt cattttctcc
    19681 atttttttac attctgcaac tctagcttta gcctcatcta agtgtgcttt ataataatca
    19741 cttgtttttg cttcatctcc acaacctgct aaaaaagcca aagcgcctaa accaattaac
    19801 ccactaaaaa taaaatgttt cattgttctt ctccttgatt tgatatagaa ataaaatatt
    19861 ttagcattat tttatttcta tttaagagcg tctgagtttg atttacttca agttttttta
    19921 atgcaacctg catcttttat aaatttatcc atttttacct gttgcattat tctttgattg
    19981 ctaagtaatg agcagatata ttattttaat ctataataag tgattttgat tttttgagtg
    20041 gtttttacag tctgcaattt ttcatcaggg ttttgtttaa gttttgcaat gagtgtggct
    20101 ttgttttaga aaactttata ttgaagtttt aattgttgtt atgtatcatt aaatttttat
    20161 cataaagaat ttttaaaaaa agagattaaa ttttacttta gatttggagt gttaaataag
    20221 taaagtattt gtttaaaata ttatttgtta attgaataag tttgatttgt ttttggatta
    20281 tatatgaaat aattaaagta atggtggatt tagcaggact ataatttata gttaaaacac
    20341 ctaaaaactt tattctaaag tatatatctt aaaaaaacat atactttaac atatactttt
    20401 taaaaagtaa aaatttatta ttttttacat aaaaaattta actattttac tgaatgacac
    20461 actccaca
//
LOCUS       DAQUWA010000032        20463 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.032, whole genome shotgun sequence.
ACCESSION   DAQUWA010000032 DAQUWA010000000
VERSION     DAQUWA010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20463
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.032"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(149..1471)
                     /locus_tag="R8X70_000984"
     CDS             complement(149..1471)
                     /locus_tag="R8X70_000984"
                     /inference="COORDINATES: protein
                     motif:HMM:NF015763.1,HMM:NF017985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HEF2928768.1"
                     /translation="MRAIFVLIFLALSNLYSCALCATYTPNVDVNLDFNMSNEKIKQV
                     DISWEFSEEFFNILLENYDFNYNDKFDPDELEIVKYTLLDYIKPKHFLTQFSFNGLEE
                     NINIKQFKNPKLQIKSPRLFFSYQVVLDMPIKDYNTFSIKIHDDGGFFNFNIKNQNSI
                     SLNSQNYIISSIDSSTASFEVYQGQLPQDVYIDNAPSPSPSKNFLEKLIEFNNTLFAH
                     IKDILRKEFDFKSFLILLVISFAYGVFHASAPGHAKMLTSSYFLTHKSTPLKILYFVS
                     RIGVIHILSAFLLVSVGVVLLEHLLKDVNNEAGFVLTKITSLFIIFIALFMISKKILS
                     DKKQCCCAHHKSNEWGIILSAALVPCPGVVLLIVFAYEFSFWYALSSAIFITLGMCLV
                     LFAFALGANQFYKSISHTKIRIFLEYFGLIVMFLFGLFLFINIKTNAL"
     gene            complement(1468..2337)
                     /locus_tag="R8X70_000985"
     CDS             complement(1468..2337)
                     /locus_tag="R8X70_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEF2928769.1"
                     /translation="MLRILLLSVLCVFAFGKPIISVSIPPQAFFVEKIAKDSVEINIL
                     IPPNSDEHTMEFKPQALKKLEQSEIYFLADLELEKILEKKFKSVLKNVKIVNINEGIH
                     LLEGGHDHEHEHDHDHDRHHAEEYDEHNDPHVWLDPILVKKLAQNITQALVQSFPNNK
                     EFYEANLANFLKELDQMDAQIAEKLKNIKRNEFIVYHPSWAYLAKRYNLVQIPVEIDG
                     KEPKSKDLQNLIKLAKEKDIRVIFVQPGFPENSAKVLAKELNAQIVSINHLARNWDEE
                     LLKSIQALSSALQ"
     gene            2470..2814
                     /locus_tag="R8X70_000986"
     CDS             2470..2814
                     /locus_tag="R8X70_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEF2928770.1"
                     /translation="MEALELLKKHDIAITDLRVELLQILSLAKTPLSYDHFDIKANKT
                     SFYRNMELFEKKGIVSKSELNRKSFYELADHAKAHFVCDKCHKISDIQMPKVKGMIKS
                     VLIKGICSDCEK"
     gene            complement(2869..3717)
                     /gene="lepB"
                     /locus_tag="R8X70_000987"
     CDS             complement(2869..3717)
                     /gene="lepB"
                     /locus_tag="R8X70_000987"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEF2928771.1"
                     /translation="MNFLKKLYKFSQSWTGTVIIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFDKDGHLIKGQSPQRGDIVVFRNPKNEKE
                     HFVKRCVGVGGDRIVYANKTLYVRMHEGDEFMKEHYPDDLATLGGQIYVKEPYRQKGI
                     HYDLNKDIESDILRFLSVGKFAMSPTYFKELGNNIGFSGGNAYVFDVAEEEYFMVGDN
                     RDYSYDSRFWGSVPYRLIVGKPWFVYFSWDQDKNVRWERIGRFVDTLENEEEYIHDHD
                     DEDKLS"
     gene            complement(3718..4575)
                     /gene="folD"
                     /locus_tag="R8X70_000988"
     CDS             complement(3718..4575)
                     /gene="folD"
                     /locus_tag="R8X70_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEF2928772.1"
                     /translation="MTLLDGKALSAKIKQELKEKNKMLKENGVETCLAVILVGNDPAS
                     QTYVNSKAKACEECDIKSLVYRLDENTTQNELLALINTLNHDDSVHGILVQLPLPKHI
                     SKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYDINLEGLDS
                     VVIGASNIVGRPMATMLLNAGCTVSICHIKTKDLSAYTQKADLIIVAAGCVNLLRADM
                     VKEGAIIIDVGINRLENGKIVGDVDFEEVSKKASFITPVPGGVGPMTIAMLLENTVKS
                     AKNSLKSGI"
     gene            4653..5000
                     /locus_tag="R8X70_000989"
     CDS             4653..5000
                     /locus_tag="R8X70_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928773.1"
                     /translation="MKAVLIFLGAILNLFASDFITLKEYSKMLYENPRGISCKKCHGN
                     DGSEQTLGFYMKNGVKTAYKVPSIQNLSFEEFQNSLNQDKDAKSIMPNYSLTNDEIIT
                     LYNYIKQSKKEQK"
     gene            4997..6271
                     /gene="hemL"
                     /locus_tag="R8X70_000990"
     CDS             4997..6271
                     /gene="hemL"
                     /locus_tag="R8X70_000990"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEF2928774.1"
                     /translation="MTNKKAFKIACSLIAGGVNSPVRAFANVQSEPRFISHGKGAHIF
                     DIEGNSYIDYVQSWGPLLFGHCDKDILKACNEALKKGSSFGAPTLLETQLAELVLEDF
                     PHLDKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSTGSGAATFN
                     SPSSLGVLADVAKHTLVATYNDIESVKELFEKNKDIACVIIEPIAGNMGLVPGKQDFL
                     EELVKICKENDTLLIFDEVMSGYRASYLGSYGINHIQADIVTFGKVIGGGLPAAAFAA
                     RAEIMDILSPLGGVYQAGTLSGNPLAMAAGIASLSKAKKKKDLYTKLGKLAKRLTKGM
                     KELANERGVALQTCYVGSMFGYFFTQDPVYNYKNALKSDLKLFSKFHQNMLKNGIYLA
                     PSQFETGFICAKMNKEHIDKTLQSTHESFKKL"
     gene            6268..6573
                     /locus_tag="R8X70_000991"
     CDS             6268..6573
                     /locus_tag="R8X70_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEF2928775.1"
                     /translation="MSENSNKRQKIIRKTIEAADGLSLGISMVVAILIGIGVGYLLKK
                     FTPYPWLFWLGVFWGVAAAILNVYKTYKSQVKSYGEFQQRDEFIKEKIRQKEQDNGK"
     gene            6563..7066
                     /locus_tag="R8X70_000992"
     CDS             6563..7066
                     /locus_tag="R8X70_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928776.1"
                     /translation="MENKKAFFIILCLIHVLFYCILVIFKWINLNIILSYEFAFFSIL
                     LIVFTSYSNYKKFILAQAKNHQKDFIYPSLFYIKKIEKLPRIVKFISIKDDLSLNFKD
                     RLRFFTLFFALFKLIAYGVLVAGFLFLHRQDKLDILSYICGISSLLVCVFIFMLYIRR
                     YESKKNH"
     gene            7044..8231
                     /locus_tag="R8X70_000993"
     CDS             7044..8231
                     /locus_tag="R8X70_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2928777.1"
                     /translation="MSPKKIIRSMTALFASMTFLFAGNALIVSSIGVILKENKESSLA
                     VGVLSSCFFIGALIGTIGAHKIISRIGHIRSFGLFGAVFGISAMLHTLSENLVFWAIL
                     RFFIGICYYGLLMVIESWLNEKSKNAVRSRILGFYEIVFYLAFGIGILIIALDLNKHN
                     IFILSAALILLSSLPLNLIKIKEPVLPAPSPISIPKIFDIAPLAIVTSFIAGMLINGF
                     FSMASLFILLQGFGAQEVSYFMFCGVLGGFLAQIVVGSISDKMGRKFAIITCSSIGFF
                     TMLIFAFFKLHLYMQYFLGILLGIGVFCLYALALARANDMLTSKNQGVELGRGVLFCY
                     SLGSLFGPLILGFLIQYFNTDGFVWFYIASLGFLILFAVNKPNILNKKFKKKPGNMVM
                     LDD"
     gene            8224..10533
                     /locus_tag="R8X70_000994"
     CDS             8224..10533
                     /locus_tag="R8X70_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEF2928778.1"
                     /translation="MINTQLTSQIANAQKNDIKTDSGISKDKLNSKDNPKEALSQALK
                     QNLGLSKNASNEEVLTRFVQNETSAKLKELVNKLLDQINAQKNPDSPMLKQGKNLNLA
                     PNFANELKVLSTELAKSDTFTQVLDKLNQILKPASEIKNSNLAPLLKNSGIFFEAKLK
                     DALNEELLPKSFHSLISMIKSLSSEKIGAQIAQLANANLSPKDTLKELRNIIYSNKNE
                     NKQILNQSSFKALLNLSSKLENFKNYIAKNPSHTQEKILPIASKIAKELNAIKNDFFK
                     ALNRPENLMIKDTELLKQSAKAFEKLENTLKNILGDHFPKTPQKESILESLLNHKENI
                     KNENIKNELIKNENIKEDIKAQNEDINKNDEYTKDESPDSSIKQEESEEKSPQVPKKE
                     NSLDDNDADIKQDIKKEENLESQEDFHPKEDQNLDSKTENRKDNTQDSKNKTEENQAE
                     NNTKNSTSNQDKIKDEKQEKIKENITKENPKFYETKTENKTSANTHNPNNTQNTQQLN
                     NQTAQNIIKNQEFIKQNIVKNLAFSVENLDLEQVQDLSKSLSNLSRKVNESLKELEPH
                     TQNAKLNQAELKTLEHKLNLSIKDLAQIKPKTEQDIAESLHHDVKSTLLQISNLAKNE
                     GNEAVYNQANRLLAQIELNQLMSLANDSINTYLPFSWEDLDDSKIMFRRGKKDKFFAQ
                     IKLEFAKLGDLEILISLNNDKYIDINIMAENVEFRKTIYENAHELKRNINKAGLLSAN
                     FFVGDIIRSKFDTRNAKNLDLEMGMDKKV"
     gene            10530..10811
                     /locus_tag="R8X70_000995"
     CDS             10530..10811
                     /locus_tag="R8X70_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HEF2928779.1"
                     /translation="MSKIKKSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(10808..11608)
                     /locus_tag="R8X70_000996"
     CDS             complement(10808..11608)
                     /locus_tag="R8X70_000996"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEF2928780.1"
                     /translation="MSFSNESSRIFGLIAGVEFPSFIQKIINEKYVNYFKIDMSEFKA
                     PCEYESLNALFTRSLQIPREINEGFISPSDGKILECGSAFLADNALFAFSIKGHTYSI
                     EELLKDSFKKEELENGLDYVNIYLSPRDYHRYHSPCNMQILSATYTSGALYSVNEKHL
                     ERISNLYVKNERVSLKCQNEKGIFWLVFIGAQNVGKMRFKFDTSIQTNAKFSHNFTRK
                     YENLELKKGEELGNFELGSTIVLIAQKGLLDIKLKAGQNVKFGEKIAD"
     gene            complement(11605..12729)
                     /locus_tag="R8X70_000997"
     CDS             complement(11605..12729)
                     /locus_tag="R8X70_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEF2928781.1"
                     /translation="MIFFIFSFVTLLIFGLANIYIYKRLIKKIFIFKYLYKIFTFVFT
                     LLFLAQAIFLIFRRNEYLSDTWYEFLAALYAPTYCLFFITLGLDFIRLILMLMGKMHK
                     KYSLALRSVFDLTIISLAVVLIYTSINNAIRVPEIQSTDIYLAKLDRDLKIAMLTDIH
                     LGKNLHKDFLDRLIVEVNLQKPDMVVIVGDLVDTNPKELQNYISRLNDLKSTYGTFYA
                     LGNHEYYHGVDEVLNLLKEYTNMKILLNQNLDLGFINIAGLGDLAGLSKGLYAPDLAR
                     VKVDLNTSKASILLAHQPKTALLYNLSDFDLILSGHTHGGQIFPFMFLVKLHQGFIRG
                     LYDLGENTKLFVSSGAGFWGPSLRVFAPNEIVILNLKGEK"
     gene            12814..14109
                     /locus_tag="R8X70_000998"
     CDS             12814..14109
                     /locus_tag="R8X70_000998"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEF2928782.1"
                     /translation="MYRFAPSPTGDMHIGNLRAALFNYICARQKNMDFILRIEDTDKA
                     RNITGKEEEIKEILHLFGISWQHYYVQSENLKFHRQMALKLVSEKKAFACFCTEEELE
                     AKKELAKKQGKAYRYDGTCQNLADIDVLKCEKPFVIRLKKPTHTMKFTDFIKGELSFE
                     PENIDSFVIMRTDKTPTYNFACAVDDMLENVSCIIRGEDHVSNTPKQEHIRASLGYDK
                     AMTYAHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTL
                     EEAIEWFDISKISKAPARFDLKKLLQINREHIKMMADNELNTALNLNKDLAQLAKFYT
                     QEASTIKEIKEKLEAIFGAKDFNEFEPECKILKDLLSQIEPFESYEEFKSYLLEKSQL
                     KGKKFFMPLRIILTGNTHGPELSDLYPYIKNYINELARI"
     gene            14113..14394
                     /locus_tag="R8X70_000999"
     CDS             14113..14394
                     /locus_tag="R8X70_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEF2928783.1"
                     /translation="MVVDSLIISIFQVIQIIINIYTWIIIITALLSWVNPDPYNPIVQ
                     ILYKLSYPAYALVRKIPTRIGSIDLAPLIIVLALQFLSIFLGNILRSLL"
     gene            14388..16019
                     /locus_tag="R8X70_001000"
     CDS             14388..16019
                     /locus_tag="R8X70_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEF2928784.1"
                     /translation="MVRKILILLSLSLVFLNASPYNLERLKQEENSIAKDYYIYRLLE
                     KKTISKKEAEGLNSHIFRYVGKIKSELEKIIPVKIFIDPKYAPCYNYTKVNILDANQT
                     CQSIRLNSIAFIASLDNASRSALAQKLSHQRGDLANLLLAFNTPEPIAYIIQKEDVNG
                     FFRLRNYSKKYDFDLNASFANKLPTHVGFKNFAQNIIIKKENPKFRASMLKIDPTFVN
                     EDSAFYLGINALAYNKEELAYNFFAKAAQTFKMQSNKDNAIFWMWMIKKDDKDLQTLA
                     KSSSLNIYSLYAKELTNSEFLKIEVIDSTNKKKNNFNMQDPFAWQKLNKQIREADASE
                     LDRLAKEFDSKETLPIYAYILERKSKFKNHYFIMPYYEYIKDYSAPRQALILAIARQE
                     SRFIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFEPKNAYYFGNHHLNY
                     LEKHLKSPLFIAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMEFVPYQESRIYGKKV
                     LANYIVYRRLLNDSIKISDIFENLTQNKAGDLNKS"
     gene            complement(15916..16401)
                     /locus_tag="R8X70_001001"
     CDS             complement(15916..16401)
                     /locus_tag="R8X70_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928785.1"
                     /translation="MKIYTLALAMLVFSACSLKEEAVVDANLKTQTLMFAQKYKITQD
                     KMNAIITLSYLNPILDKASEEDIFALTITPDTLKIENLEIFINERKANIEELDEEFFK
                     YLIQNRYTRYLKITLPSVKKEDKITAKICLNHLPCFELNFQKYPKSLYYRSEDVDTQY
                     N"
     gene            16494..16988
                     /gene="mobB"
                     /locus_tag="R8X70_001002"
     CDS             16494..16988
                     /gene="mobB"
                     /locus_tag="R8X70_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEF2928786.1"
                     /translation="MKKSIIAFSGPSNSGKTTLITKIANEFIKQNLKVLIIKHDPADK
                     AQFDVNGKDSFKFFQSGAEVMVLSPTRTTFFSHEKRDILSALKIAPDFDLCLVEGLKT
                     LDLPRISVFYKEIDESYFAFSNAIASYEKIDSYPNLTWLDLNDVQGICNYILKNAKNL
                     QGEL"
     gene            16990..17832
                     /locus_tag="R8X70_001003"
     CDS             16990..17832
                     /locus_tag="R8X70_001003"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEF2928787.1"
                     /translation="MQELISYIQKAVIEISNALKFPDTSYSQNQNSTGDTQLKFDVLS
                     DEIITNTLSQCPNIKAIISEEKDEILNINENAKFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKASAKNLKAALYSMYGARLELVICEDKPKLYRLDKNNEFVFVKDLQMQEKGKIN
                     ATGGTQKFWEEKHAKFIKKLFDEGYRLRYSGAMVSDINQILLKGGGLFSYPATSDAPK
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNHSLLELDFDEIHATTPCFFGSKYEISELLK
                     AYNE"
     gene            17825..18022
                     /locus_tag="R8X70_001004"
     CDS             17825..18022
                     /locus_tag="R8X70_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928788.1"
                     /translation="MSEIRDEFEQDLDKKKEILSSCQSSKGLKSCYNCDEIFNCSTRK
                     DYVDAVYNSMSKGKTEGGFDF"
     gene            18032..19918
                     /gene="metG"
                     /locus_tag="R8X70_001005"
     CDS             18032..19918
                     /gene="metG"
                     /locus_tag="R8X70_001005"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEF2928789.1"
                     /translation="MRYLTTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRLLT
                     GTDEHGQKIEQAAKIRNSTPKEYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVK
                     AMFLKMWQKGDIYKDEYEGHYCISCESFFAKSQLINECGCPDCGKDTSLLKEESYFFK
                     LSKYQDKILQWYDKEDPILPKNKKNELINFVQSGLKDLSITRTSFDWGIEIPEEIKDD
                     KHIIYVWLDALFIYISSLDYQSQGENAKFWPAHIHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDAYGLEAFRYFLLREVPFGNDGDFS
                     ESVLINRINTELGNEFGNLLNRIIGMSIKYNQGNISQEGVLEFYKNELDTAKEHLDNA
                     INFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKANKIKEANALIGLCANILAKT
                     SLLLSPTLPKSCQKVGLALNFEISPTNYQKLILQNELLDFKASACEALFPKIEKPLLS
                     QEEKQEVKKEEKPKIKIDDFAKIEIKVAKVIDCQNIEGSEKLLKFKLELDNKEIRQVL
                     SGIAKYYKASDLIGKQVCVISNLKKAKIFGHESDGMILSAKSGDKLVLISPEQLVENG
                     SLVG"
     gene            19920..>20463
                     /locus_tag="R8X70_001006"
     CDS             19920..>20463
                     /locus_tag="R8X70_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928790.1"
                     /translation="MNISNLSELIHANMLNEGSVLSVTGFALSLHELKNGFAFFSNNK
                     KEIIQAVQKGAFAIISEHELCIDDKEIYYLQVDNLESALIKLLRFLCEEKECEFIALQ
                     AYELGICKAFSLNILKGNIFVDFNSLIKAKKGEIFCFSDENYLLQLCASLTILKEANF
                     TLLSRSSFFFTTLVCDNLYFK"
BASE COUNT         7471 a         3229 c         3092 g         6671 t
ORIGIN      
        1 tataaaataa tttttatatg aattgatttt gaacactaag cattttttca tagtttataa
       61 actacatgct tgcttgttaa ttatgtatga tttgaaaaat ctagatttag ataaaaaata
      121 ttttacccat tttatctaga aatttctttt atagtgcatt tgtttttata ttgataaaca
      181 aaaacaaacc aaataaaaac ataacaataa gtccaaaata ttctaaaaag attcttattt
      241 ttgtatgtga aatgctttta taaaattgat ttgctcctaa tgcaaaagca aacaatacta
      301 aacacattcc caaagtgata aaaatagcag agcttaacgc ataccaaaaa ctaaactcat
      361 aggcaaatac tataagtaaa acaaccccgg gacaaggcac taaagcagcg ctaagtataa
      421 taccccattc attgctttta tgatgagcac agcaacattg ctttttatcg cttaatatct
      481 ttttactaat cataaataaa gcaataaaaa taataaacaa actcgtaatc ttagtcaata
      541 caaagccagc ttcattattg acatctttta ataaatgctc aagtaaaacc actccaacac
      601 ttaccaataa aaacgcactc aatatgtgaa taactcctat cctagataca aagtacaata
      661 tctttaaggg tgtactttta tgggttaaaa aatacgaact tgtcagcatt ttagcatgac
      721 ctggagcact agcatgaaaa acaccatacg caaaagaaat cactaataaa atcaaaaagg
      781 atttaaaatc aaattctttt cttaatatat ctttaatatg ggcaaaaagt gtattattaa
      841 attcaatcaa tttttctaaa aaattttttg aaggagaagg acttggagca ttatctatat
      901 atacatcttg aggtaattgc ccttgatata cttcaaaaga tgcagtgctt gaatcaatac
      961 tagaaatgat ataattttgc gaatttaggc ttatagaatt ttgatttttt atattaaaat
     1021 taaaaaatcc tccatcatcg tgaattttta tgctaaaggt gttataatct ttaatgggca
     1081 tatctaaaac aacttgataa ctaaagaaca aacgaggaga ctttatctgc aatttaggat
     1141 ttttaaattg cttgatattt atattttctt ccaagccatt aaagctaaat tgagttaaaa
     1201 aatgcttagg ttttatgtag tctaaaagtg tgtattttac aatttcaagt tcatcaggat
     1261 caaatttatc attataatta aagtcataat tttcaagcaa aatattaaaa aattcttctg
     1321 aaaattccca gcttatatct acttgtttga ttttttcatt gctcatatta aaatctaaat
     1381 ttacatctac atttggggtg taagttgcgc acaaggcgca agaatataag ttgcttaaag
     1441 ctagaaatat taaaacaaaa atcgctctca ttgtaaggcc gaacttaaag cttggatact
     1501 ttttagaagc tcctcatccc aatttctagc caaatgatta atagaaacaa tttgagcatt
     1561 taattcttta gctaacactt ttgcagaatt ttctggaaag ccaggctgaa caaagataac
     1621 gcgtatatct ttttcttttg caagcttgat aagattttgc aaatctttac ttttaggctc
     1681 tttaccatca atttctacag gaatttgcac aagattgtat cttttagcca aataagccca
     1741 acttggatga taaactataa attcatttct tttaatattt ttaagtttct ctgcgatttg
     1801 agcatccatt tgatcaagct cttttaaaaa gttagccaaa tttgcttcat aaaattcttt
     1861 attgtttgga aaactttgca ctaaagcttg ggtaatattt tgtgccaatt ttttaaccaa
     1921 aataggatca agccaaacat gagggtcatt atgctcatca tactcttctg cgtgatgtct
     1981 atcgtgatca tgatcgtgtt catgctcatg atcatgccct ccttcaagaa gatgaatacc
     2041 ttcattaata ttaacaattt ttacattttt taatacactt ttaaattttt tttccaaaat
     2101 tttttcaagc tctaaatctg ctaagaaata aatttcactt tgctctaatt ttttcaatgc
     2161 ttgaggctta aactccatag tatgctcatc tgaatttggt ggtatgagta tatttatttc
     2221 aacactgtct ttagctattt tttccacaaa aaaagcttga ggtggaatgc tgacactaat
     2281 tatgggcttt ccaaaagcaa aaacacataa tacacttaat aataaaattc tcaacataga
     2341 ttttccttat aataaaatat tttgaaatta tacaaaatgc aacttagttg caacttaaac
     2401 ataaagttgc aaacataaag cttttttatg ctacaataaa atataattta tattttaaag
     2461 gtaaatctta tggaagctct tgaattatta aaaaaacacg atatagctat aacagaccta
     2521 cgcgtagaat tactacaaat tttatccctt gcaaagactc cattaagtta cgatcatttt
     2581 gatatcaaag ccaataaaac cagtttttat cgtaatatgg aactttttga aaaaaagggt
     2641 attgttagta aaagtgagtt aaaccgcaaa agtttttatg aattagcaga tcacgctaag
     2701 gcacattttg tttgtgataa atgccataaa attagcgata ttcaaatgcc aaaagtaaaa
     2761 ggtatgatta aaagtgtgct tataaaaggc atttgtagtg attgtgaaaa ataaaataag
     2821 ccaaatttaa gaaagtgatt ttatttactg cttatacaga aaacaaaatc aactcaattt
     2881 atcctcatca tcatgatcat gaatgtattc ttcttcattt tccaaagtat caacaaaacg
     2941 ccctatcctt tcccagcgaa catttttatc ttgatcccat gaaaaataaa caaaccaagg
     3001 ctttcctact atcaaacgat aaggaacaga gccccaaaaa cggctgtcat aagaataatc
     3061 tctattgtcc cctaccataa aatattcttc ttcggccaca tcaaaaacat aggcattacc
     3121 accactaaag cctatattat ttccaagttc tttaaaataa gttggcgaca tagcaaattt
     3181 gcccacacta agaaaacgca aaatatcact ttctatatct ttgtttaaat cataatgaat
     3241 ccctttttgc ctataaggct ctttaacata aatttgccct ccaagggttg ccaaatcatc
     3301 aggataatgt tctttcataa attcatcacc ctcatgcatt cttacataaa gtgttttatt
     3361 ggcataaacg attctatctc cacccactcc tacacagcgt tttacaaaat gctctttttc
     3421 atttttaggg tttctaaaaa ccactatatc gcctctttgg gggctttgcc ctttgattaa
     3481 atgtccatct ttatcaaaat ccggtaaaac tggaatttca agccacggaa tatgtggagt
     3541 tggaattcca tagctgaatt ttttaacaaa taaaaaatca cctacaagca aggtattttt
     3601 catcgaacct gaaggtataa caaaggcttg tataaagaaa aagattacta aaagaacgat
     3661 gataaccgtt cctgtccatg attgtgaaaa tttataaagt ttttttaaaa aattcattta
     3721 tattcctgat tttaaactat ttttagctga ttttactgtg ttttccaaaa gcatcgctat
     3781 agtcataggg cctacaccgc ctggaacagg ggtgataaaa ctggcttttt ttgaaacctc
     3841 ttcaaaatcc acatcgccta ctattttgcc attttcaagg cgattaattc ctacatcaat
     3901 tataatagca ccctctttaa ccatatctgc acgaagcaaa ttaacacatc ctgctgctac
     3961 tataatcaaa tctgcttttt gagtataagc gctcaaatct tttgttttta tatgacaaat
     4021 acttaccgta caacccgcat ttaaaagcat ggtagccata ggacgaccta ctatatttga
     4081 agcaccgatt acaacgctat ctagtccttc aagattgata tcataagctt ttaaaagctt
     4141 cataacgcca agtggagtgc aaggtaaaaa tccactttcc aaacctaaat ttaaataacc
     4201 cacattaata ggatgaaagc catccacatc cttactactg atgatacttt ctaaaattaa
     4261 atccttgctg atatgttttg gtaaaggaag ctgaactaaa attccgtgga cactatcatc
     4321 gtgatttaag gtattaataa gagctaaaag ctcattttga gttgtatttt catccaaacg
     4381 ataaaccaaa gattttatat cacattcttc gcaagcttta gctttagaat tgacataagt
     4441 ttgacttgct ggatcattac ctactaaaat taccgcaagg caagtttcta ctccattttc
     4501 ttttaacatt ttgttttttt ctttaagttc ttgtttaatc ttggcgctta aagctttacc
     4561 atcaagcaaa gtcattcttt tcctttataa atttatcact tttttaaagt aaaaattgta
     4621 tcatattaaa acttcattaa caaggtgaaa ttttgaaagc tgttttaata tttctaggag
     4681 ctattttaaa tctttttgct tctgatttca taacacttaa agagtattcg aaaatgctct
     4741 atgaaaaccc aaggggtatt agttgtaaaa aatgccatgg taacgatgga agcgaacaaa
     4801 ctctaggttt ttatatgaaa aatggagtta aaacagccta taaagtccca agtattcaaa
     4861 atcttagttt tgaagaattt caaaattctc ttaatcaaga caaagatgca aaatcgatca
     4921 tgccaaatta ctcattaacc aatgatgaaa tcataacctt atataattac atcaagcaat
     4981 ctaaaaagga gcaaaaatga caaacaaaaa agcttttaaa atagcttgca gtcttattgc
     5041 aggaggtgta aattctcctg ttcgtgcttt tgccaatgtg caaagtgagc ctagatttat
     5101 atcccatgga aagggagctc atatttttga tatagaaggc aatagctata ttgattatgt
     5161 gcaaagttgg ggacctttgc tttttgggca ttgcgataaa gatatattaa aagcttgcaa
     5221 tgaggcttta aaaaagggtt caagctttgg tgcgccgact ttgctagaaa cacaactggc
     5281 cgagcttgtt ttagaagact ttccgcattt agataaaatt cgctttgtaa gcagtggtac
     5341 agaagcaacc atgagtgcca tacgccttgc tcgcggtttt accaaaaaag ataaaattct
     5401 aaaatttgaa ggttgctatc acgggcattc agattcttta cttgtaagta ctggaagtgg
     5461 cgctgctact tttaattcac cgagctcttt aggggtttta gcagatgtag caaagcatac
     5521 tctagtagca acttataacg atatagaaag cgtaaaagag ctttttgaga aaaataaaga
     5581 cattgcttgt gttattatcg aacctattgc aggaaatatg ggattagttc ctggcaagca
     5641 agatttctta gaagagcttg tcaaaatttg caaagaaaac gataccttgc tcatctttga
     5701 tgaagtgatg agtggataca gagcttcata tcttggctct tatggtatca atcacataca
     5761 agcagatatc gttacttttg gcaaggttat aggtggaggc ttacctgcag cagcttttgc
     5821 agctagagca gaaatcatgg atattttaag tccattagga ggagtttatc aagcaggaac
     5881 actcagtgga aatcctttgg caatggctgc aggaattgct agtttatcta aagccaaaaa
     5941 gaaaaaagat ctttatacta aacttggaaa attagccaaa aggcttacta agggaatgaa
     6001 agaacttgca aatgaaagag gtgttgcttt acaaacttgc tatgtgggtt ctatgtttgg
     6061 atattttttc acgcaagatc cagtatataa ttataaaaat gctttaaaat ctgatcttaa
     6121 actcttttct aaatttcatc aaaacatgct taaaaatgga atttatctag ctccttctca
     6181 atttgaaaca ggatttatct gcgctaaaat gaataaagag catatcgata aaaccctaca
     6241 aagtacacat gaaagcttta agaaactatg agtgagaatt ctaataaaag acaaaaaatc
     6301 attcgcaaga ctatagaagc cgcagatggg cttagtcttg gaatttccat ggtcgttgct
     6361 attttaatcg ggattggcgt ggggtatttg ttaaaaaaat ttacacccta cccttggctt
     6421 ttttggctgg gtgtattttg gggtgttgca gcagcaatac ttaatgttta taaaacctat
     6481 aaatcacaag ttaaaagcta tggagaattt caacaaagag acgagtttat aaaagagaaa
     6541 attcgccaaa aagaacaaga taatggaaaa taaaaaagct ttttttatta tcttgtgctt
     6601 aattcacgtc ttgttttatt gcattcttgt tatttttaaa tggataaatt taaatataat
     6661 tttaagctat gaatttgctt tttttagcat tttattgatc gtttttactt cttattctaa
     6721 ttataagaaa tttatcctag ctcaagcaaa aaaccatcaa aaagatttca tttatccgag
     6781 tttattttat ataaaaaaga tagaaaagtt acctagaatt gttaaattta tttccattaa
     6841 agacgattta tctctaaatt ttaaagatag gttacgcttt tttactttgt tttttgcctt
     6901 atttaaattg atagcctatg gggttttagt tgcgggattt ttatttttac atcgtcaaga
     6961 taaattagat attttatcct atatatgtgg aatttcatcc ttgctagtat gtgtttttat
     7021 ttttatgctg tatataagaa gatatgagtc caaaaaaaat cattagatcc atgacagcac
     7081 tttttgccag catgacattt ttgtttgcag gcaatgcctt gatcgtaagc tccataggtg
     7141 ttattttaaa agaaaataaa gaaagctcct tggctgttgg agtgctaagc tcttgctttt
     7201 ttataggagc ccttataggc accatcggag cacataaaat catctctcgc ataggacata
     7261 taagatcttt tggtttattt ggtgcggtgt ttggaatttc tgctatgctt cataccctta
     7321 gtgaaaatct tgttttttgg gcgattttaa gattttttat aggaatttgc tattatgggc
     7381 ttttaatggt aatagaatca tggcttaatg aaaaaagcaa aaacgccgtt cgttctagaa
     7441 ttttaggttt ttatgaaatc gtattttatc ttgcgtttgg tattgggatt ttgattattg
     7501 ctttagattt aaacaagcat aatatattta ttttaagtgc agcacttatc ttgctttcat
     7561 cattgccttt aaatttaatc aagatcaaag aacccgtctt gcccgcacca agtcctattt
     7621 ctatacctaa aatttttgat atagctcctt tagctattgt tacaagtttt atagctggaa
     7681 tgcttattaa tgggtttttt tctatggcgt ctttgtttat acttttacaa ggctttggag
     7741 ctcaagaagt ttcttatttt atgttttgtg gggtgctggg tggattttta gcccaaattg
     7801 tagtaggaag tatttctgat aaaatgggac gaaaattcgc aatcatcact tgctcaagca
     7861 taggtttttt taccatgctt atctttgctt tttttaaact tcatttgtat atgcaatatt
     7921 ttttaggcat tttacttggt ataggagttt tttgtcttta tgctctagct cttgcaaggg
     7981 ctaatgatat gctaacaagc aaaaatcaag gcgttgaact gggtcgtggg gttttatttt
     8041 gttattcttt aggctctttg tttggtcctt taattttagg atttttaata caatatttta
     8101 atacagatgg ttttgtttgg ttttatatag cttctcttgg atttcttatc ctttttgcag
     8161 ttaataaacc caatatttta aataaaaaat ttaagaaaaa accaggaaat atggtgatgc
     8221 ttgatgatta atactcaact tacaagccaa attgcaaatg cacaaaaaaa tgacataaaa
     8281 accgatagtg ggataagtaa agataaatta aattctaaag ataatcctaa agaagcactt
     8341 tctcaagcct taaaacaaaa tttgggacta agtaaaaatg caagcaatga agaagtttta
     8401 actcgttttg ttcaaaatga aacaagcgca aaattaaaag aacttgtcaa taagctctta
     8461 gatcaaatca atgcacaaaa aaatcctgac tcacctatgc ttaaacaagg aaaaaatcta
     8521 aatttagccc ctaattttgc caatgaatta aaagtcttaa gcacagaact tgcaaaaagc
     8581 gataccttta ctcaagtttt ggataaatta aaccaaattt taaaacccgc aagtgaaata
     8641 aaaaatagta atttagcgcc attgttaaaa aattcgggta tcttttttga agcgaaatta
     8701 aaagacgctt taaacgagga attattaccc aaaagttttc attctcttat aagcatgatt
     8761 aaaagtctta gcagtgaaaa gattggtgcg caaattgcac agcttgcaaa tgcaaattta
     8821 agtcctaaag acaccttaaa agaattaaga aatattattt attctaataa aaatgaaaat
     8881 aagcaaattt taaatcaaag ctcttttaaa gctcttttaa atttaagctc aaaactagag
     8941 aattttaaaa actatatcgc taaaaatcca agccatactc aagaaaaaat tcttcctata
     9001 gctagtaaaa ttgcaaaaga attaaatgcg ataaaaaatg atttttttaa agctttaaac
     9061 agaccagaaa atttaatgat aaaagatacc gagcttttaa aacaaagtgc aaaagctttt
     9121 gaaaaattag aaaatacctt aaaaaatatc ctaggtgatc attttcctaa aacaccccaa
     9181 aaagaaagta ttttagaaag tcttttaaat cataaagaaa acattaaaaa tgaaaatatt
     9241 aaaaacgagc ttatcaaaaa cgaaaatatc aaagaagata taaaagctca aaacgaagac
     9301 attaacaaga atgatgaata taccaaagat gaaagccccg actctagcat caaacaagaa
     9361 gaaagtgaag aaaaatcccc tcaagtacca aaaaaagaaa attcattaga tgataatgat
     9421 gcggatataa aacaagatat caaaaaagaa gaaaatttag aatctcaaga agattttcat
     9481 ccaaaagagg atcaaaattt ggattctaaa acggaaaatc gtaaagacaa tactcaagat
     9541 tcaaaaaata aaacagaaga aaatcaagca gaaaacaata caaaaaattc cacctcaaac
     9601 caggataaaa tcaaagatga aaaacaagaa aaaattaaag aaaatataac caaagaaaat
     9661 cctaaatttt acgaaacaaa aacagaaaac aaaacttcag caaacactca taatccaaac
     9721 aatactcaaa atacacaaca attaaacaat caaaccgccc aaaatatcat aaaaaatcaa
     9781 gaatttataa aacaaaatat tgtaaagaat ttggccttta gcgtagaaaa tttggactta
     9841 gagcaagtgc aggatttaag caaaagctta agcaatcttt caagaaaagt caatgaaagc
     9901 ctaaaagaac tcgaacccca tactcaaaat gccaaactca atcaagcaga attaaaaacc
     9961 ttagaacata aattaaattt atccataaaa gatttagcac aaattaaacc aaaaaccgag
    10021 caggatatag ccgaatcttt acatcatgat gtaaaatcaa cccttttgca aatttcaaat
    10081 ttagccaaaa acgaaggtaa tgaagccgta tacaatcaag ccaatcgtct tttagcgcaa
    10141 attgaactca atcaactcat gtctttagct aatgattcta tcaataccta tctgcccttt
    10201 tcttgggagg atttagatga ttctaagatc atgtttaggc gtggaaaaaa ggataaattt
    10261 tttgctcaaa ttaaacttga atttgccaag cttggcgatt tggaaattct tatctcttta
    10321 aacaatgata aatacataga tattaatatc atggcagaaa atgttgaatt tagaaaaacc
    10381 atctatgaaa atgctcacga acttaaaaga aatatcaata aagcaggact tttaagtgca
    10441 aatttctttg taggagatat cataagaagc aaatttgata caagaaatgc caaaaattta
    10501 gatcttgaaa tgggtatgga taaaaaagta tgagcaagat aaaaaaatca atcaaaaaag
    10561 ctgtcgctct aggctatcaa aaagaaaaaa attcagcacc taaagttctt gctagcggca
    10621 aaggagaaag tgctgctaaa attatctctt tagctaaaga acacggagtt cctatcaaag
    10681 aagatgaaga tttgatagaa attttaagta aattagactt aggagatgaa attccgccca
    10741 atatgtataa agctgtggct gaagtttttg cttttattta tcaaatggca aataaaacac
    10801 ctaaaaatta atctgctatt ttttctccaa atttaacatt ctgccctgct ttaagcttga
    10861 tatctaaaag tcctttttga gcaattaaaa ctatggtaga acctaattca aaatttccca
    10921 attcttcacc ttttttaagc tctagatttt catattttct agtaaaatta tgagaaaatt
    10981 ttgcattagt ttgtatgctt gtatcaaatt taaaacgcat ttttcctaca ttttgagctc
    11041 ctataaacac aagccaaaaa ataccctttt cattttgaca ttttaaactc actctttcat
    11101 tttttacata taaattacta atacgctcta aatgcttttc atttacacta taaagggcgc
    11161 cacttgtgta agttgcactt aaaatttgca tattgcaagg actatgatag cggtgataat
    11221 ctcttggaga aagatagata ttaacataat caagcccatt ttccaattct tcttttttaa
    11281 aactatcctt taaaagctct tctatgctat aagtatgccc tttaatcgaa aaagcaaaga
    11341 gtgcattatc tgctaaaaaa gcacttccgc actctaaaat tttcccatca cttggactta
    11401 taaaaccctc atttatctct cttggaattt gcaaagatct tgtaaaaagt gcatttaagc
    11461 tttcatattc acaaggagct ttaaattcgc tcatatcgat cttaaaataa ttgacatatt
    11521 tttcattgat tattttttgt ataaaactag gaaattcaac ccctgctata agtccaaaaa
    11581 ttcttgaact ctcattagaa aaactcattt ttcacctttc aaatttaaaa ttacaatttc
    11641 attgggagca aaaactctta aactaggccc ccaaaaacct gccccactgc taacaaaaag
    11701 tttggtattt tctcctaaat cataaagccc acgtataaaa ccttgatgaa gctttactaa
    11761 aaacataaaa gggaaaattt gtcccccatg cgtatgacca cttaaaataa gatcaaaatc
    11821 acttaaatta tagagcaagg ctgttttagg ctgatgagca agcaaaatac tagctttact
    11881 tgtgtttaaa tctaccttaa cccttgctaa atcaggagcg tacaaaccct tactaagccc
    11941 tgctaaatct ccaagtcctg cgatatttat aaaacctagg tctaaatttt ggttaagtaa
    12001 aattttcata ttggtgtatt ctttaagtaa atttaaaact tcatctactc catgataata
    12061 ctcatgatta cccaaagcat aaaaagttcc ataggtggat tttaaatcat taagccttga
    12121 aatataattt tgcaattctt taggatttgt atctactaaa tcccccacta taaccaccat
    12181 atcaggcttt tgcaaattta cttcaacgat gagcctatcc aaaaaatcct tatgcaaatt
    12241 tttacccaaa tgtatatctg taagcatagc tatttttaag tcgcgatcaa gtttggcaag
    12301 atagatatcc gtactttgaa tttcaggcac tcttatagcg ttatttatac ttgtataaat
    12361 caatactact gctaagctta tgatagttaa atcaaaaacc gagcgcaggg caagactata
    12421 ttttttatgc atcttaccca ttaacattaa aataagcctt ataaaatcaa gccccaaagt
    12481 tataaaaaat aaacaataag tcggtgcata caatgcagcc aaaaattcgt accaagtatc
    12541 gcttaggtat tcatttctgc gaaagattaa aaatatcgct tgagctagaa aaagcagagt
    12601 aaaaacaaag gtaaaaattt tataaagata cttaaagata aaaattttct taatcaatct
    12661 tttataaata taaatatttg ccaaaccaaa aatcaataac gtaacgaaag aaaaaataaa
    12721 aaatatcata atcctaatta tagcaaagca aattaaatat ccatataaat ttttctgtta
    12781 taataagctt ttaataaaat caaaggttat caaatgtatc gttttgcacc ttctccaaca
    12841 ggcgatatgc atataggaaa tttacgcgcg gctttattta attatatatg tgctagacaa
    12901 aaaaatatgg atttcatttt gcgtatcgaa gacaccgata aggctagaaa tataacagga
    12961 aaagaagaag agattaaaga aattttgcat ctttttggca tttcatggca gcattattat
    13021 gtacaaagtg aaaatttaaa atttcatcgt caaatggctt taaagcttgt aagtgaaaaa
    13081 aaagcttttg cttgtttttg caccgaagaa gagcttgaag caaaaaaaga actcgccaaa
    13141 aagcaaggca aggcctatcg ctacgatggc acttgtcaga atttagcaga tattgatgtt
    13201 ttaaaatgtg aaaaaccctt tgtaattcgc cttaaaaaac ctactcacac tatgaaattt
    13261 acagatttta tcaaagggga gttaagtttt gagcctgaaa atatcgattc ttttgtgatt
    13321 atgcgaacag ataaaacccc tacttacaat tttgcttgtg cggtagatga tatgcttgaa
    13381 aatgtaagtt gcatcatacg cggtgaagat catgtttcaa ataccccaaa acaagaacat
    13441 attcgtgcaa gtttaggtta tgataaagct atgacttatg cacatttacc tattatctta
    13501 aatgaagagg gtgtaaaaat gagcaaaaga gaggctcatt cttcagtaaa atggttactt
    13561 gagagtggaa ttttacctag tgcgatcgca aattatctta tcatgctagg caataaaact
    13621 ccttgtgaaa tttttacctt agaagaagcg attgagtggt ttgatattag caaaatttct
    13681 aaagctccag cgagatttga tcttaaaaaa cttttgcaaa tcaatcgcga acatataaaa
    13741 atgatggcag ataatgaact caatactgct ttaaatttaa ataaagatct agcacaactt
    13801 gccaaatttt atacccaaga agcaagcacc atcaaagaaa tcaaagaaaa actagaagct
    13861 atctttggtg ctaaagattt taacgaattt gaaccagaat gtaaaatttt aaaagatctt
    13921 ttaagtcaaa tcgaaccttt tgagagttat gaagagttta aaagctatct cttagaaaaa
    13981 agtcaactaa agggtaaaaa attttttatg cctctaagaa ttatcctaac tggaaatact
    14041 catggccctg aattaagtga tctttaccct tatataaaaa attatattaa cgaattagca
    14101 aggatataaa taatggttgt agattctttg attatttcta tttttcaagt gattcaaatt
    14161 attatcaata tttacacttg gattatcatc atcacagcac ttttaagttg ggtaaatcct
    14221 gatccttaca atcctatcgt tcaaatttta tacaagctaa gctaccctgc ttatgcttta
    14281 gtgagaaaaa ttccaacacg cataggaagc atagatcttg cgcctttgat tatcgtttta
    14341 gccttacaat ttcttagtat ttttcttgga aatatcctaa ggagcttatt gtgagaaaaa
    14401 tacttatctt acttagctta agcttagtat ttttaaatgc tagcccctat aatttagaaa
    14461 gattaaaaca agaggaaaat tccatagcta aagattatta tatctatcgt cttttagaaa
    14521 aaaaaacaat aagtaaaaaa gaggctgaag gcttaaattc tcatatcttc cgctatgtag
    14581 gtaaaatcaa atccgaactt gaaaaaataa ttcctgtaaa aattttcatc gatcctaaat
    14641 acgctccatg ctacaactac acgaaggtta atatactcga tgcaaatcaa acttgccaaa
    14701 gtataagatt aaactcaata gcctttatag caagccttga taatgctagc cgaagtgcct
    14761 tagctcaaaa acttagtcat caaagaggcg atttggctaa tttactttta gcttttaaca
    14821 ctcccgaacc tatagcttat atcattcaaa aagaagatgt taatggtttt tttagacttc
    14881 gtaattattc taaaaaatat gattttgatt tgaatgctag ttttgctaat aagctgccaa
    14941 ctcatgtagg atttaagaat tttgcacaaa atattatcat aaaaaaagaa aatcccaaat
    15001 ttagggcttc aatgctaaaa atagatccaa catttgtaaa tgaggattct gctttttatt
    15061 taggcattaa tgccttagcc tacaacaaag aagaactggc ttacaatttc tttgccaaag
    15121 cagcgcaaac ttttaaaatg caaagcaaca aagacaatgc tatattttgg atgtggatga
    15181 ttaaaaaaga tgataaagat ttgcaaactt tagccaaaag ctcttcttta aatatctata
    15241 gtctttacgc taaagaatta acaaattctg aatttcttaa aatcgaagtc atagattcta
    15301 caaataagaa aaaaaacaat ttcaatatgc aagatccttt tgcatggcaa aaactcaaca
    15361 aacaaattcg cgaagctgat gcaagcgaac ttgatagatt ggctaaagaa tttgactcaa
    15421 aagaaactct gcctatctat gcttatatct tagaaaggaa atcaaaattt aaaaaccatt
    15481 attttataat gccttattat gaatacatta aagattatag cgccccaaga caagcgctta
    15541 tcttagccat tgctagacaa gaaagccgtt ttatccctac tgcgatatcg gtttcttatg
    15601 ctttaggtat gatgcaattt atgccatttt tagccaatca tatcggcgag aaagaattaa
    15661 aaattccaaa ttttgatcaa gattttatgt ttgagccaaa aaatgcctat tattttggaa
    15721 atcatcattt aaattattta gaaaaacatt taaaatctcc tctttttatt gcttatgctt
    15781 ataatggagg cataggcttt accaatcgta tgcttgcaag aaatgatatg tttaagacag
    15841 gcaaattcga acctttcttg tctatggaat ttgttcctta tcaagaaagt cgaatttatg
    15901 gaaaaaaagt attggctaat tatattgtgt atcgacgtct tctgaacgat agtataaaga
    15961 tttcggatat ttttgaaaat ttaactcaaa acaaggcagg tgatttaaac aaatcttagc
    16021 tgtaattttg tcttcttttt ttacgcttgg aagagttatt tttagataac gggtataacg
    16081 attttgtatc aagtatttaa aaaactcttc atcaagttct tctatattag cctttctttc
    16141 attgataaaa atttctaaat tttctatctt caaagtatca ggagtgatag tcaaagcaaa
    16201 aatatcctcc tcgctagctt tatctaaaat aggatttaaa taagacaggg taattatagc
    16261 attcatttta tcttgagtaa ttttatattt ttgagcaaac attaaagttt gagttttcaa
    16321 attcgcatcc acaaccgctt cttcctttaa agaacaagca ctaaaaacta acattgcaag
    16381 agctaaagta taaatcttca tatttttcct aatttttttc tatattttaa ccttttaact
    16441 ctattttttg gtttaaaata ctataattta cattttattt taggaaaatg gtaatgaaaa
    16501 aatcaatcat agcttttagc ggtccctcaa attcaggcaa aacaacactg atcacaaaaa
    16561 ttgcaaatga atttataaaa caaaacctaa aagttttgat tatcaaacac gatcctgcag
    16621 ataaagctca atttgatgtc aatggcaagg atagttttaa gttttttcaa agtggtgctg
    16681 aagtgatggt tttaagccct actcgcacga cttttttctc tcatgaaaaa agagatattt
    16741 taagcgcgtt aaaaatagcg cctgattttg atttatgttt ggttgaagga ttaaaaacct
    16801 tagatttacc acgcataagt gttttttata aagaaattga tgaaagttat tttgcttttt
    16861 ctaatgctat tgcaagctat gaaaaaattg attcttatcc gaatttaact tggcttgatt
    16921 taaatgacgt gcaaggaatt tgcaattata ttttaaaaaa tgcgaaaaat ttacaaggag
    16981 aattataaaa tgcaagaact tatttcctac atacaaaaag cagtaattga aatttcaaat
    17041 gctttaaaat ttcccgatac aagctatagt caaaaccaaa actccacagg cgatactcaa
    17101 cttaaatttg atgttttaag tgatgagatt atcacaaata ctttaagtca gtgccctaac
    17161 attaaagcta ttatcagcga agaaaaagat gagattttaa atatcaatga aaatgcgaaa
    17221 tttatcgtcg cttacgatcc gcttgatggc tcaagtttaa tggatgttaa ttttgctata
    17281 ggttctattt ttgctattta tgaagaaaaa gcaagtgcta aaaatttaaa agctgcgctt
    17341 tatagcatgt atggagctcg cttggaactt gttatttgcg aagataagcc aaaactctac
    17401 cgtcttgata aaaacaacga atttgttttt gtaaaagacc ttcaaatgca agaaaaaggt
    17461 aaaatcaatg ctacaggcgg tactcaaaaa ttttgggaag aaaagcatgc taagtttatc
    17521 aaaaaattat tcgatgaggg ttatcgccta agatattcag gagctatggt aagtgatatc
    17581 aatcaaattt tgctcaaagg tggtggactt tttagctatc cagcaactag tgatgcacct
    17641 aagggtaaat tgcgcgcttt ttttgaagta tttcctttag cttttattat agaaaaagca
    17701 ggaggtaaaa ccacaaatgg aaaaaatcat tccttgttag aacttgattt tgatgaaatt
    17761 cacgcaacca caccttgctt ttttggctca aaatatgaaa tttcagagct tttaaaggct
    17821 tataatgagt gaaataagag atgagtttga gcaagactta gataaaaaaa aagaaatttt
    17881 aagctcttgc caaagctcaa aaggcttaaa gtcttgctat aattgcgatg aaatttttaa
    17941 ttgctctaca agaaaagatt atgtagatgc agtttacaat agtatgtcta agggtaaaac
    18001 cgaaggcgga tttgattttt aaaggaataa aatgcgttat cttacaactc caatttatta
    18061 tgtaaatgat gtgcctcact taggacatgc ttataccact atcattgcgg acactttagc
    18121 tagattttat cgtttgcaag ggcatgagac tagattgtta acaggtactg atgaacacgg
    18181 acaaaaaata gaacaagcag caaaaataag aaactcaacc ccaaaagaat acgctgataa
    18241 aatcagttct gaatttaaaa aactttggga tgagtttgaa atcacttatg atatatatgc
    18301 aagaacaacc gatactaggc atgttgaatt tgttaaagct atgtttttaa aaatgtggca
    18361 aaaaggagat atttataagg atgaatatga gggacattat tgtatttcat gtgaaagttt
    18421 ttttgcaaaa agtcaactta taaacgaatg tggatgtcct gattgtggca aagatacttc
    18481 tttattaaaa gaagaaagtt atttttttaa gctttcaaaa tatcaagata agattcttca
    18541 atggtatgat aaagaagatc ctatcttgcc taaaaataaa aaaaatgaat tgattaattt
    18601 tgtccaaagt ggacttaaag atctttctat tactcgaaca agctttgatt ggggtattga
    18661 aatcccagaa gaaattaaag acgataaaca cattatttat gtatggcttg atgcgctttt
    18721 tatttatata agctcgcttg attatcaaag ccaaggagaa aatgctaaat tttggccagc
    18781 ccacatacac ttagtaggca aagacatctt gcgttttcat gcgatttatt ggccagcctt
    18841 tttaatgagt gtggatttac ctttgcctaa atttatcggc gcacacggtt ggtggactaa
    18901 agagggtgaa aaaatgagca agtctaaagg taatgtcgta aaacctaaag aagtggtaga
    18961 tgcttatggc ttagaggctt ttagatactt tctgctaaga gaagttcctt ttgggaatga
    19021 tggcgatttt agcgaaagtg ttttgattaa tagaatcaat acagaactag gcaatgaatt
    19081 tggcaattta ctcaaccgca tcataggaat gagtataaaa tataatcaag gtaatatttc
    19141 tcaagaaggc gttttagaat tttataaaaa cgaacttgat acggctaaag agcacttaga
    19201 taacgctata aactttttag aaaacctaca atgtaatcgc tatctagaag agctttttaa
    19261 agccttaagt gttgcaaatt tagccattag caaatacgaa ccttggaatt taatcaaagc
    19321 aaataaaatc aaagaagcca atgctcttat aggactttgt gcaaatatct tagctaaaac
    19381 aagtctttta ttaagcccta ctttgccaaa atcttgtcaa aaagtaggtt tggctttaaa
    19441 ttttgaaatt tctcctacaa actatcaaaa acttatctta caaaatgaac ttttagattt
    19501 taaggctagc gcctgtgaag ctttatttcc aaaaatagaa aaacctctct tatctcaaga
    19561 agaaaaacaa gaagtcaaaa aagaagaaaa gcctaaaatc aaaatcgatg attttgcaaa
    19621 aatagagatt aaggtagcca aggtgattga ttgtcaaaat atagaaggca gtgaaaaact
    19681 tttaaaattt aaactcgaac ttgacaataa agaaattcgt caagtgcttt caggtattgc
    19741 taagtattat aaagcaagcg atttgatagg aaagcaagtt tgtgttataa gcaatcttaa
    19801 aaaagctaag atttttggac atgaaagcga tggtatgata ctttctgcaa aaagcgggga
    19861 taaacttgtg ctcataagcc ctgaacaact tgtagaaaac ggctctttag taggctagga
    19921 tgaatattag caatctaagc gaactcattc atgcaaatat gcttaatgaa ggcagtgttt
    19981 taagcgttac aggctttgca ttaagtcttc atgagcttaa aaatggcttc gcttttttta
    20041 gcaataataa aaaagagata atccaagcag tgcaaaaagg cgcatttgct attatttcag
    20101 agcatgagct ttgtattgat gataaagaaa tttattatct tcaggtggat aatctagaat
    20161 cagccttaat taaactcttg cgttttttat gcgaagaaaa agagtgtgaa tttatagcac
    20221 ttcaagctta tgagctagga atttgcaaag cattttcttt aaacatttta aaaggaaata
    20281 tatttgtaga ttttaactca cttatcaagg ctaaaaaggg tgaaattttt tgttttagcg
    20341 atgagaatta cttacttcaa ctttgcgcat ctttaacaat cctaaaagaa gcaaatttta
    20401 ccctactttc tcgctctagc ttttttttta cgactctagt ttgtgataat ttgtatttta
    20461 aaa
//
LOCUS       DAQUWA010000033        19813 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.033, whole genome shotgun sequence.
ACCESSION   DAQUWA010000033 DAQUWA010000000
VERSION     DAQUWA010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19813
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.033"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            32..1213
                     /locus_tag="R8X70_001007"
     CDS             32..1213
                     /locus_tag="R8X70_001007"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HEF2928791.1"
                     /translation="MKVYLDNNATTMLDPSAYELMLPFLKDMYGNPNSLHQWGSATHP
                     ALREAMDKLYAGLGANDLDDIVITSCATESINWVLKGIYFDHILDKERNEVIISSVEH
                     PAVAAAAQFLKSLGVKLIELPVNEEGVSTPQDLQNVISDKTALVSVMWANNETGMIFD
                     IQKMAEIAHEFGALFHTDATQAVGKIKVNLNQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLEFEDSHIRRLRDKLEDS
                     ILALPDTSVVGKREYRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNY
                     K"
     gene            1223..2194
                     /locus_tag="R8X70_001008"
     CDS             1223..2194
                     /locus_tag="R8X70_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HEF2928792.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHTVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AEGAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(2217..4100)
                     /locus_tag="R8X70_001009"
     CDS             complement(2217..4100)
                     /locus_tag="R8X70_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEF2928793.1"
                     /translation="MKKIIILFLLGISCLWGDEFRLIDTNASAQDKSVYSLVQKYIDL
                     NHQIKEFKKNNDENSSSYDGILSEFEKDKKSILSKMPDMIVKQQINEKAVESFLKTRQ
                     NLLDLQKKSINKPYVYVDTTLNIMYLDVVKSFYSSLFELERLFKNAANSESIISTVDK
                     AMENLQNSTNIDLSIYKAKINNPSELEKISNKEEMIFNAVDAYVEILKYLRANADLLE
                     SNYIFSLLELQVWIDRINEMANIDFINTGKIVISILVLVFFMSLRRFFSNIVYFILVR
                     LVYHNKSDADDIKVIFIDNIKKPVGFLLICYAISLCLTIATYPAPLSINLSNLFHIVY
                     AVLIAWLILRILDGYGVVLVSKLAQKSGKKEVVNLVIKILYFVIFVIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVKMYLGVGYDATPEKLENCVK
                     DLKELLYTSPLVAHEDDGALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAK
                     AIK"
     gene            complement(4097..4732)
                     /locus_tag="R8X70_001010"
     CDS             complement(4097..4732)
                     /locus_tag="R8X70_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEF2928794.1"
                     /translation="MDNLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIVPPYRVGQDYLATTSAIEYALNSLRIKNIVVCGHSN
                     CGGCNALYYSDEELDKIPNVKKWLTMLDPIKRDVTIFARDDIAMRSWLTEKLNLVNSL
                     QNIFTYPGVQEALDEGRLEVHAWYYIIETGEIYEYDFKAKIFKLIQNRKTQ"
     gene            4891..5586
                     /locus_tag="R8X70_001011"
     CDS             4891..5586
                     /locus_tag="R8X70_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEF2928795.1"
                     /translation="MSLYDRDYSRSREFENTRSSELGIFIKQTYQLFAASLLAATVGA
                     YVGIYALAAFFIQSQVTFWILFAVEIGLLIALQFKKREAPLNLILLFGFTFCSGLTLT
                     PLLISVLALPAGGVIIAQAFALTTVAFAALSIFAMNTKKDFTLMGKALFIVLIVVVAA
                     SLLNIFFQSSLLNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLF
                     VSLLNILRSFNSR"
     gene            5693..6049
                     /gene="secG"
                     /locus_tag="R8X70_001012"
     CDS             5693..6049
                     /gene="secG"
                     /locus_tag="R8X70_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEF2928796.1"
                     /translation="MITLLTILQFVIVVIICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFIMGILLIANTIGLGYLYNSTSKDSLAEKIKIETNTSIPTAPNAINVP
                     AIPSAPQIPNESNTSK"
     gene            6066..6623
                     /gene="frr"
                     /locus_tag="R8X70_001013"
     CDS             6066..6623
                     /gene="frr"
                     /locus_tag="R8X70_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEF2928797.1"
                     /translation="MINEILNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHIQVDY
                     YGSLTPLNQVATVLASDASTISITPWEKPMLKTIESAIAAANIGVNPNNDGESVKLFF
                     PPMTREQREENVKQAKAMGEKAKVSVRNIRKDANDAVKKLEKDKAISEDEAKKAYDEV
                     QKLTDTYTAKIDESVKNKESELLKV"
     gene            6626..7234
                     /gene="pyrE"
                     /locus_tag="R8X70_001014"
     CDS             6626..7234
                     /gene="pyrE"
                     /locus_tag="R8X70_001014"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEF2928798.1"
                     /translation="MDLEQIYKDCGAYLQGHFLLSSGKHSEFYLQSAKVLENPKLAAR
                     LCDELAKIIAEFNIEFDSICSPALGGILAGYELARACDKRFIFTERVNGEMTLRRGFE
                     VKEGERFIICEDIITTGGSALESAKIIESLGGKVLGFAALANRGFCAVENLKNPRKPS
                     AKLPDNLPLFTLGNFDFQIYDENDCPFCKEGSKAIKPGSRGN"
     gene            7235..7645
                     /locus_tag="R8X70_001015"
     CDS             7235..7645
                     /locus_tag="R8X70_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEF2928799.1"
                     /translation="MKTKAKIASRWLRFRALLIDIFLIYVPILYLFYFLLGSKEAFLN
                     NSYITALCTFLFGFIQALFLASKAQSPGLKAYDLYLIDLKTGKKITFFRILLRYIIFI
                     ISFGLIFGLFISFLRKDKLNLHDILTQTCIVTKI"
     gene            7660..8682
                     /locus_tag="R8X70_001016"
     CDS             7660..8682
                     /locus_tag="R8X70_001016"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEF2928800.1"
                     /translation="MQRKRIYNPGSNETLTDRKVFSGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFTD
                     DIIEEYIHYLVDQRLVAINLDKIYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            8704..10092
                     /locus_tag="R8X70_001017"
     CDS             8704..10092
                     /locus_tag="R8X70_001017"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEF2928801.1"
                     /translation="MKKDSYTKPNNTLLCDFYELTMMQGYFLNGFENKTAYFDIFFRK
                     IPDHGSFAIFAGLEDILDFVSCLHFDEDDIAYLHSQGIFKEEFLRYLKNFKFKGEIYA
                     MQEGEIIFPNEPLMIIKANAIEAQILESFLLLSINHQSLIATKANRIVRAAKNLSVLE
                     FGTRRAHGSEAALKGARAAIIGGCKASSCTLAGKNYSIMTSGTMAHSWVQMFDDELSA
                     FCHYLELYPQNPTLLIDTYNYKQGLENAVKAFKKFKIKQCGVRIDSGNLEILSKEIRT
                     ILDKNDLKECKIIVSNSLDEKSINKLLKNDAPIDAFGVGEKLITASSDPIFGCVYKLV
                     AIEEDKLITPKIKISEDKQKITLPHFKKLFRIYDKNTQKMLFDELYIYNEKLPKLDEN
                     LERKELLKCVFKEGKILNKQKNVEEIALYAKSQISKLDEKFLNFNNKEKYKIKLSKDL
                     TKLRQNFTNTTL"
     gene            complement(10186..10725)
                     /locus_tag="R8X70_001018"
     CDS             complement(10186..10725)
                     /locus_tag="R8X70_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEF2928802.1"
                     /translation="MLIRFKDKFPNLGQNVFVAEGAKIIGEVEIGDESSVWFNCVLRG
                     DVNFIKIGKRTNIQDLTTIHVWHREFNKDGSLKDAGFPTCIGDDVTIGHNCVIHACKI
                     GSRVLVGMNAVIMDDAAIGDDSIVGAGSVVTKGKKFPPKSLILGNPAKLIRELSDEEV
                     AFLKQSALNYVEFKNDFLD"
     gene            10844..11473
                     /locus_tag="R8X70_001019"
     CDS             10844..11473
                     /locus_tag="R8X70_001019"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEF2928803.1"
                     /translation="MNAFEQKRCQSMAEEIAQKIFINEELFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALNFKDADSVLEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFEDGQNGWKNYAPYDRILFSAYTTQLPEILL
                     DQLSDGGILVAPILHNGKQFITRITKNGTHLQKEILEECLFVPIVDGKE"
     gene            complement(11493..12683)
                     /locus_tag="R8X70_001020"
     CDS             complement(11493..12683)
                     /locus_tag="R8X70_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEF2928804.1"
                     /translation="MKMNYKEQSHIIPTYKRFDIVLESGEGVYLLDDKGKKYLDFSSG
                     IGVCTLGYNHAEFNAKIKAQVDKLLHTSNLYYNENIAQAAKHLAKASGLERVFFTNSG
                     AESIEGAMKVARKYAFNKGIKGGNFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISG
                     VKFAKYNDFSSVERLVNEKTCAIILESVQGEGGVNPAQKDFYKALRKLCDEKDILLIA
                     DEIQCGMGRSGKFFAYEHSGILPDVMTSAKALGCGLSVGAFVVSEKVAQKSLEAGDHG
                     STYGGNPLVCAGVNAVFEIFKKEKILENVSKLTPYLEQSLENLIKEFRFCKKRKGLGF
                     MQGLSLDKSVKVAEVIKKCQENSLLLISCGENDLRFLPPLIIEKSHIDEMSEKLRKVF
                     KSFE"
     gene            complement(12687..13526)
                     /gene="argB"
                     /locus_tag="R8X70_001021"
     CDS             complement(12687..13526)
                     /gene="argB"
                     /locus_tag="R8X70_001021"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEF2928805.1"
                     /translation="MQKYLEKANVLIEALPYIRKFSSKIILIKYGGSAMENEELKHCV
                     MQDIALLKLVGLKPIIVHGGGKDISKMCEKLGVKSEFNNGLRVSDQATAEVASMVLNY
                     INKNLVHSLQNLGVKAIGLCGKDGGLLECVQKDENLGFVGEIQKVNSSVLQDLLEKDF
                     LPIIAPIGMDENFNTYNINADDAACAIAKALKAEKLAFLTDTAGLYENFEDKNSLISK
                     ISITQAKALVDKIQGGMHVKLKSCIDAYESGVKKVHILDGRVKHSLLLEFFTDEGIGT
                     LVG"
     gene            complement(13536..13982)
                     /locus_tag="R8X70_001022"
     CDS             complement(13536..13982)
                     /locus_tag="R8X70_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEF2928806.1"
                     /translation="MQVRAMQKSDYEGVYKLWCDIKGFGIRSIDDSKENIEKFLDRNP
                     NLSAVAVIDQEIVGSILCGHDGRTGGFYHVCVHKDHRKKGIAHEMTKFCLEALKSEKI
                     NKIALIAFKSNDLGNEFWKHYGFTLREDANYYDLSLNSHNQTSFNV"
     gene            complement(13993..15021)
                     /locus_tag="R8X70_001023"
     CDS             complement(13993..15021)
                     /locus_tag="R8X70_001023"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEF2928807.1"
                     /translation="MRLKVGILGASGYAGNELVRILLNHPKVEISYIGSSSSVGQSYM
                     KLYPNTPLNLNFEDKNLDELELDVLFTATPHEFSAKLFSESLLKKMKIIDLSADFRLK
                     NPKDYELWYKFTHPNQELLKNAVYGLCELYQEEIKNANLIANPGCYTTCSILSLYPLF
                     KEKMIDLNSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAYGLASHRHTPEIEEHLSY
                     AAGEKITLQFAPHLVPMQRGILTTAYANLKHSVSEKEIREIYQKYYQDRKFIRLLPPQ
                     SFPQTRWVKSSNFADINFSIDERTNRIIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDE
                     GLKFFANL"
     gene            complement(15222..16316)
                     /locus_tag="R8X70_001024"
     CDS             complement(15222..16316)
                     /locus_tag="R8X70_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEF2928808.1"
                     /translation="MKENPSFLKEQIITYLGNKRALLGFLNKGFKVAKKELGKDKFSF
                     CDIFSGSGVVSRFAKAHSNYILANDLENYSKLINKCYLSNKDKNLTELLKHYHKILTQ
                     NLEFQAGFISELYAPKNEVCIQKDERVFYTLKNALYLDTLRQKIEKEIPEELKHFFIA
                     PLIYEASVHSNTSGVFKGFYKGRDGVGKFGGEAQNALKRIKGDIELKMPIFSNFSCEF
                     EVVQKDANLLAKELENIDVAYLDPPYNQHPYSSNYFMLNLIANYQRPDEISKISGIPR
                     DWNRSIFNKEKQAEDALFELINDLKAKIILLSYNCEGFVKKEKFLKRLQSLGKCQILE
                     QKYPTFRASRNLKNRSIHIHEQLYILKKNI"
     gene            complement(16356..16874)
                     /locus_tag="R8X70_001025"
     CDS             complement(16356..16874)
                     /locus_tag="R8X70_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEF2928809.1"
                     /translation="MSKEKEVLLNEEIRADEIRCIGDDGKAYGIISSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENDANRDKEPNFEG
                     RYVNMLVTPKKA"
     gene            complement(16871..18679)
                     /locus_tag="R8X70_001026"
     CDS             complement(16871..18679)
                     /locus_tag="R8X70_001026"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEF2928810.1"
                     /translation="MEKEVIAYLDDEKIVDSQSKNSTDLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVNSKIGEEDLAKIEKKMKELAEAKQE
                     IEKYEITKNEAIAKFKDDDLKQEVLLRIPDGKVSIYKQGEFEDLCRGPHVPNTKFLRN
                     FSLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEHLRIIEEAKKRDHRKLGTELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKA
                     IGDDEIWDTATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPERFKLEYTDSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVG
                     IVPISDSHIAYAKEIQRALLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDEEV
                     AKRSVALRDRRAKEQKNLSLEEFIKLVKEKMSEVHF"
     gene            complement(18811..19614)
                     /locus_tag="R8X70_001027"
     CDS             complement(18811..19614)
                     /locus_tag="R8X70_001027"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEF2928811.1"
                     /translation="MDNLHALILGIIEGLTEFLPISSTGHMILGTTILGIDINEFWKS
                     FLIIIQLGSILAVLFVFWRKLFKGLDIWFKLAVGFFPTGLIGFVLYKYLKELFNGYVV
                     VVMLILGGIVFIVIELAHKNKEYKTNSLEKVSFLQAFCIGIIQSLAMIPGTSRSGASI
                     IGGLLLGLNRKTAAEFSFLLAIPTMIVATAYSIYKEPELLSNANALIPLSIGFVTAFV
                     VAVFVIKFFLKFISKFDFIPFGIYRIVLGILFFYLYYSGILNSGSEFKL"
BASE COUNT         6799 a         3469 c         2922 g         6623 t
ORIGIN      
        1 aatatccgaa ttaaaattta aggaaattaa agtgaaagta tatttagata ataatgcaac
       61 aacgatgctt gatccaagcg catacgaatt aatgttgcca tttttaaaag acatgtatgg
      121 aaatccaaac agtcttcacc aatggggcag cgcaactcat cctgccctaa gagaagctat
      181 ggataaactt tatgcgggac ttggcgcaaa tgatttagat gatatagtta taacatcctg
      241 tgctactgaa agtatcaact gggtgcttaa gggtatatat tttgatcata ttttagataa
      301 agaacgcaat gaagtgatta tctctagcgt agaacatcca gcagtagctg cagcagctca
      361 atttttaaaa agtttaggtg taaagcttat agaacttcca gtaaatgaag aaggagtttc
      421 tactcctcaa gatttacaaa atgtaatcag cgataaaacc gcacttgtta gcgtaatgtg
      481 ggctaataat gaaacaggaa tgatttttga tattcaaaaa atggcagaaa ttgctcatga
      541 atttggagcg ctttttcata cagatgctac ccaagcagta ggaaaaatca aagtaaattt
      601 aaaccaagta ggagttgatt ttgcttcatt ttcagctcat aaattccatg gaccaaaagg
      661 tgtaggtgga ctttttataa aaaaaggact taagcttact ccacttttac acggtggaga
      721 acacatgggt ggtcgtagaa gcgggacttt aaatgtgcct tatatagtgg ctatgggcga
      781 ggctttgcgt attgcaaaca ctatgcttga atttgaagac tcacatattc gccgtttaag
      841 agataaactt gaagatagca ttttagccct tcctgatact agtgtcgtgg gaaaaagaga
      901 gtatcgcgtc cctaatacaa ttttagcaag tattaaaggc gttgaaggcg aagctatgct
      961 ttgggactta aataaaaatg gtattgcagc aagcaccgga tcagcctgtg ctagcgaagc
     1021 attagaaagc aatcctatta tggaagctat cggtgcggag catgatttag cacatacagc
     1081 tttaagactt tctttgtcac gttttaacac tgaagaagaa attgattatg cagcaaaaca
     1141 aattaaaaat gcaacacaga gattaagagc aatttcttgt acttatgctt ataatccaaa
     1201 taattacaaa taaggatgaa aaatgggaaa aaatagttta attggtggat ctatctggga
     1261 tgagtattca caaaaagttc aagatagaat gaataatcct caacatatgg gagaatttag
     1321 tgaagaagat gctaaagcac gcaatgcaaa attgatcgta gctgattttg gtgcagaaag
     1381 ttgcggcgat gcggtaagac ttttttggct tgtagatgaa aaaactgata aaattatcga
     1441 tgcaaaattt aaaagttttg gttgtggtac agctatagca agtagtgata ctatggtgga
     1501 tctttgtata ggaaaaactg tagatgaagc agtaaaaatc acaaatttag atgtggaatt
     1561 tgctatgcgt gataatccag aaactccagc tgttccacct caaaaaatgc actgttcggt
     1621 tatggcttat gatgtaatca aacaagcagc agcgcattat aaaggtataa gtcctgaaga
     1681 ttttgaagat caaattatag tttgcgagtg cgctagggta agtcttggaa ctattaaaga
     1741 agtgattaaa cttaatgatt tacacactgt agaagaaatc acacaatata ctaaagcggg
     1801 tgctttttgt aaatcctgta tcaaaccagg cggacatgaa aaaagagatt attaccttgt
     1861 agatatttta gctgaaacta gagctgaaat agatagagaa aaactcaaaa atacaatgaa
     1921 aagtgatgta gcttttgatg aaatgaccgt agtgggacaa ttaaaagcag ttgaaagtgt
     1981 tttagatgct gaaattcgcc ctatgcttca taatgatggt ggagatttgg aagtgattga
     2041 tatacaaaag gctgaaggtg cagcaattga tgtttatatt cgttatcttg gtgcttgtag
     2101 tggttgttct agtggaagtg gtgcaacact ttatgctatt gaaacaattt tacaagaaga
     2161 attaagtcca aatatacgcg ttatgccggt ttaaaaaata gcaagataaa atcttgctat
     2221 tttatagctt ttgcttgcaa atcaaggggt ggtaaatttt ctatataaat actacgactt
     2281 gggaaagcaa aggttaaacc atttttttca attatacgca taaactcaag cattaaactt
     2341 tgtctagctt ctctaaaatc ttttccacct atttctttga tataaaaata aagctctata
     2401 ttaatactac tatctgcaaa ttcacttaaa gccacataac aagcattttt ataaccctca
     2461 agatcattga tagaaactaa attttgacga tattttgttg tatgatcgcc atactttaat
     2521 gctccatcat cttcatgtgc tactaaagga cttgtatata aaagctcttt taaatctttc
     2581 acacaatttt ctaatttttc aggagtagca tcataaccaa cacccaaata cattttaaca
     2641 tgacgcccca tgcgtctttt gctccaattt ttgatattag ctcccataat agttgaattt
     2701 ggtaaaaata caagacaatt atcaaaagtt ctaatagtag tttttctaag tcctgtttca
     2761 accacggttc cttctatgcc tgaaacctct acccaatctc cttgattaaa gctattatca
     2821 aaaagtaaga gtatagaagc aaagaaattt gcaatgatat ctttcgccgc taaagcaaca
     2881 gctaaaccac caattcccaa agatgcaata atagccgaga tattaaaacc aagttgtgct
     2941 aaaatataaa gaagtgcgat cacaaaaata acaaaatata aaattttaat gactaaattt
     3001 accacttctt ttttgccact cttttgtgca agttttgaaa ccaaaaccac gccatatcca
     3061 tcaagtatcc ttaaaatcaa ccaagcgatt aaaacagcat aaactatgtg gaaaagatta
     3121 cttaaattaa tacttaaagg agcaggataa gttgctattg taagacaaag tgaaatggca
     3181 taacaaataa gcaaaaaacc cacaggtttt ttaatattgt ctataaaaat aaccttaata
     3241 tcatctgcat cgcttttatt gtgataaact aaacgaacga ggataaaata aactatattt
     3301 gaaaaaaagc gtcttaaaga cataaaaaaa actaaaacta aaatcgaaat aactatctta
     3361 cccgtattta taaaatcaat attggccatt tcattgatac gatctatcca tacttgaagt
     3421 tcaagcaaag aaaaaatata attactttct aacaaatctg cattcgcacg caaatatttt
     3481 aaaatttcta cataagcatc cacagcatta aaaatcattt cttctttatt ggaaattttc
     3541 tctaattcag atggattatt gattttagct ttataaatac taagatctat attggttgaa
     3601 ttttgcaaat tttccattgc cttatcgacc gtagagatta tactttcact atttgctgca
     3661 tttttaaaaa gtctttcaag ctcaaataaa gacgaataaa aacttttaac aacatctaaa
     3721 tacataatat ttaaggttgt atctacataa acataaggtt tgtttatgct cttcttttgt
     3781 aaatctaaca aattttgcct tgtttttaaa aagctttcta ctgctttttc attgatttgt
     3841 tgctttacta tcatatcggg cattttagaa agaatagact ttttatcttt ttcaaattcg
     3901 cttaaaattc catcatagga acttgaattt tcatcattat tttttttaaa ttctttaatt
     3961 tggtgattta aatcgatata tttttgcacc aaactataaa cactcttatc ttgcgcactt
     4021 gcattggtat ctataagacg aaattcatcc ccccaaagac atgaaatacc taaaagaaac
     4081 aaaatgatta tttttttcat tgcgttttcc tattttgaat taatttaaaa attttagcct
     4141 taaaatcata ctcatatatt tcacccgttt cgatgatata ataccaagca tgcacttcta
     4201 atcttccctc atctaaagct tcttgcactc caggataggt aaaaatattt tgcaaagaat
     4261 tcactaagtt aagtttttca gtaagccaag aacgcatagc tatatcatct cttgcaaaga
     4321 tcgtaacatc cctttttata ggatcaagca tagtgagcca tttttttaca ttaggaattt
     4381 tatccaattc ttcatcagaa tagtataatg cattacaacc accacaatta ctatgtccac
     4441 atacaacgat attcttaatg cgtaaagaat ttaaagcata ttctattgct gaagtagtcg
     4501 ctaaataatc ctgacccacg cgataaggtg ggacaatatt tgcaatattt cgtatcacaa
     4561 aaagctcacc tgggcctgta ttggtgatta aattggggat cactctagaa tcagaacaac
     4621 ctatgaaaag agtatgagga ttttgcttat ttttaagact ttcaaaaagt tcttcatgct
     4681 ctttaaaatc ctcttgcata aatttgatcg caccgctaat aagattatcc atatatcaac
     4741 ctaattgaaa aatcttaaaa ttataacaaa ttttcagcaa agaatttcac ctacaagcaa
     4801 acattcgcaa attaactctt tattaaattt tttatgctag agttcgctca agatttaagt
     4861 taaaatcgaa atcttttaag gaggatgaat atgagtcttt atgatagaga ctattcacga
     4921 tcaagagaat ttgaaaacac tcgttcaagt gaacttggta tttttattaa acaaacttat
     4981 caactttttg cggcttctct tttagcagca actgttggtg catatgtagg aatttatgct
     5041 ttagcggcat tttttataca atcacaagta accttttgga tactttttgc tgttgaaata
     5101 ggacttttga ttgccttgca atttaaaaaa cgcgaagctc cattgaattt aattttactt
     5161 tttggtttta ctttttgttc aggcttaacc ctaacgccat tactcatttc tgttcttgcc
     5221 ctaccagcag gtggagtaat catcgctcaa gcttttgctc taacaacagt agcttttgca
     5281 gcgcttagta tttttgctat gaataccaaa aaagatttca cactaatggg taaagcttta
     5341 tttatagttt taatcgtggt tgtagcggct tctttgctta atatcttctt ccaaagcagt
     5401 ttattaaatt tagctatttc agccgtagca gcgattttat tttcatttta tattctttat
     5461 gatacacaaa atattattcg cggaaactat gaaactccaa ttgaaggtgc tgtagcgctt
     5521 tatcttgatt ttgtaaacct ttttgtatct ttacttaata tcctaagaag tttcaatagt
     5581 agataatttt ttgcgggaaa gtccccgcaa aattcttaaa atttcaaatc ttttcaagtt
     5641 ttatttagtt acaatatcta actcaaaaaa tttttaaaat ttaggaaaat ttatgattac
     5701 tcttttaact attttgcagt ttgtcatcgt cgttattatt tgtatagctg ttttacttca
     5761 aaagagctca agcataggac ttggagctta tagcggaagc aatgaaagtt tatttggagc
     5821 aaaaggaccc gcaggatttt tagcgaaatt tactttcatc atgggaattt tacttattgc
     5881 aaacactata ggtttaggat atttatacaa tagtacaagt aaagattctt tagctgaaaa
     5941 aatcaaaatt gaaacaaata caagcattcc tactgctcca aatgctataa acgtgccagc
     6001 tattccaagt gctccacaaa tacctaacga atcaaataca agtaagtaat ttataaggaa
     6061 aaaatatgat taatgaaatt ttaaacaaac aaaaaactca aagtgaaaaa agcttagaag
     6121 ctttaaaaaa agattttact accctacgca caggtaaagt caatacacat atcttagatc
     6181 atattcaagt agattactat ggctctttaa ctcctttaaa tcaagttgca accgttttag
     6241 caagtgatgc ttcaacaata agcattactc cttgggaaaa acctatgtta aaaactatag
     6301 aaagcgctat tgcagcagca aatatagggg taaatccaaa caatgatggc gaaagtgtaa
     6361 aattattctt ccctccaatg acaagagagc aaagagaaga aaatgtaaaa caagcaaaag
     6421 ctatgggcga aaaagcaaaa gtttcggtaa gaaatattcg caaagatgca aacgatgccg
     6481 taaaaaaact tgaaaaagat aaagccattt cagaagacga agctaaaaaa gcctatgatg
     6541 aagtgcaaaa actaacagat acttatactg caaaaatcga tgaaagtgta aaaaacaaag
     6601 aaagcgaact tttaaaggtt taaaaatgga tttagagcaa atttataaag attgtggggc
     6661 ttatttacaa ggacattttt tactcagttc gggtaagcac tctgagtttt atcttcaaag
     6721 tgctaaagtc ttagaaaatc caaaattagc agcaagactt tgtgatgagc ttgctaaaat
     6781 tatagccgaa tttaatatag aatttgacag catttgttct cctgctttgg gaggaatttt
     6841 agcaggatat gaacttgcta gagcttgtga taaacgcttt atttttaccg aaagagttaa
     6901 tggagaaatg actctaagac gcggttttga ggtaaaagaa ggcgaaagat ttatcatttg
     6961 cgaggatatc atcacaacgg gcggaagtgc tttagaaagt gctaaaatca tagaaagttt
     7021 aggaggaaaa gttttaggtt ttgcagcatt ggcaaatcgc ggtttttgcg cggttgaaaa
     7081 tttaaaaaat cctagaaaac cgagtgcaaa actgcctgat aatttacctc tttttacttt
     7141 aggaaatttt gattttcaaa tttatgatga aaatgattgt ccgttttgca aagaaggaag
     7201 taaagctatt aagccaggaa gtcgcggaaa ttaaatgaaa actaaggcaa aaatagcctc
     7261 tagatggtta agatttagag ctttgcttat agatatattt ttaatttatg tccctatctt
     7321 atatttattt tattttttat tgggctctaa ggaggctttt ttaaacaact cctatatcac
     7381 agccctatgt actttcttat ttggttttat tcaagcttta tttttagcct caaaagctca
     7441 aagtccaggg cttaaggctt atgatcttta tctaatcgat ctaaaaacgg gtaagaaaat
     7501 aacttttttt agaattttat taagatatat tatatttatt ataagttttg ggttgatttt
     7561 tggtttattt ataagctttt taagaaaaga taaactaaat ttacatgata ttctaaccca
     7621 aacttgcata gtcacaaaga tatgaaagaa aggtaaaaaa tgcaaagaaa aagaatttat
     7681 aatccaggct caaatgaaac attaacagat cgtaaagttt ttagcggaaa tcctcatgga
     7741 atcttaaatt ttacaaaagc aaaatacact tgggctttaa aattatggga tttaatggaa
     7801 gcaaacactt ggtttccaaa agaagtagat acgactaaag atgcattaga ttatcgctgt
     7861 aatttaactg caggtgaaaa aagaatgtat gatcttgttt ggtctcagct catttctatg
     7921 gatagctttc aaaccaacaa tctagctgat aatatcaatc cttacatcac tgctcctgaa
     7981 atcaatgcgg ttttagcacg ccaagcttat gaagaagcta accattcaaa atcttatgca
     8041 gtaatggttg aagccatttg cgataatacg gatttaatct atgaaatgga aaagcacgat
     8101 gaaaccttgc gcgaaaaaaa tgattttatt tcaagtatct atgaagaatt agcgggcgat
     8161 gtagatgata ataaacttct tttggccatg gtagcaaatc aaattttaga aggagtatat
     8221 ttttatagtg gatttactgc gatttacgcg cttgcaagag caggtaaaat gcttggttct
     8281 gctcaaatga ttcgtttcat tcaaagagat gaaatcactc atcttttact ctttcaaaat
     8341 atgatcaatt cagttcgtaa agaaagacct gatttgttta atgaaaacaa tatcaacaaa
     8401 atttatgata tgtttaaaaa agcgggcgat ttagaaatca aatggggcaa atacatcact
     8461 caaaatcaaa tcatgggttt tacagacgat attatagaag aatacatcca ctatcttgta
     8521 gatcaaagac ttgttgctat caatcttgat aaaatttaca atgcaaaaca ccctatcaaa
     8581 tgggtagatg atttttctaa atttaatgat caaaaaagca atttctttga aagtaaggtc
     8641 acaaactatt ctaaaggtag tataagcttt gatgattttt aaatttcttg gaaattaact
     8701 tttatgaaaa aagattctta tacaaaacca aataacacct tgctttgtga tttttatgaa
     8761 ttaaccatga tgcaaggtta ttttctaaat ggttttgaaa acaaaacagc ttattttgat
     8821 atatttttta gaaaaattcc cgatcacggc tcttttgcta tatttgcagg acttgaggat
     8881 attttagact ttgtatcttg tttgcatttt gatgaagatg atatagccta tttgcactct
     8941 caagggatat ttaaagaaga atttttaaga tatttgaaaa attttaaatt taagggcgaa
     9001 atttatgcca tgcaagaagg cgaaatcatc tttcctaacg aacccttgat gatcatcaaa
     9061 gccaatgcta ttgaagcaca aattcttgaa agcttcttac ttttaagtat caatcatcaa
     9121 agcctaattg ccacaaaagc caatcgtatc gtaagagcag ctaaaaatct tagcgtgctt
     9181 gaatttggca cgcgaagagc tcatggaagc gaggcggcac tcaaaggggc aagagcggcc
     9241 ataataggag gttgcaaagc tagctcttgc acacttgcag ggaaaaatta tagcattatg
     9301 acaagtggaa ctatggcgca ttcttgggtg caaatgtttg atgatgaatt gagtgctttt
     9361 tgtcattatt tagaacttta tcctcaaaat cctaccttac tcatcgatac ttataattac
     9421 aaacaagggc tagaaaacgc ggtcaaagca tttaaaaaat ttaaaatcaa acaatgcggt
     9481 gtgcgtattg attctggaaa tttagaaata cttagcaaag aaattcgtac tatcttggat
     9541 aaaaatgatt taaaagaatg caaaatcatc gtttcaaatt ctttagatga aaaaagcata
     9601 aacaaactgc ttaaaaatga tgcacctatt gatgcttttg gggtaggcga aaaactcatc
     9661 actgcttcaa gtgatcctat ttttggctgt gtttataaac tcgttgccat agaagaagat
     9721 aaactcatca cgcctaaaat taaaatcagc gaagacaaac aaaaaataac cctaccgcat
     9781 tttaaaaaac tttttagaat ttatgacaaa aacactcaaa aaatgctttt tgatgagctt
     9841 tatatttata atgaaaaatt acctaaactt gatgaaaatt tagaaagaaa agaactttta
     9901 aaatgtgttt ttaaagaggg taaaattctt aataaacaaa aaaatgtaga agaaattgcc
     9961 ctatatgcaa aaagtcaaat ttcaaagctg gatgagaaat ttcttaattt taacaacaaa
    10021 gaaaaatata aaatcaaact ttcaaaagat ttaacaaagc taagacaaaa ttttacaaac
    10081 acaactctat gaaattttgt cgatatagct caaatgctcc atttgtctat ttaaaatgga
    10141 taaatttgag ctttttcata aaaacagcgt tgttaaaatt ttaaatcaat ccaaaaaatc
    10201 atttttaaat tcaacataat ttaaagcaga ttgttttaaa aatgccactt cttcatcgct
    10261 tagttcgcgt ataagttttg cagggtttcc aagtatgagt gatttgggtg gaaatttctt
    10321 gcctttggtt accacactac ctgcacccac tatactatca tctcctatag ctgcatcatc
    10381 cataatcact gcattcatcc ccacaagcac acgagagccg atcttgcaag catggatcac
    10441 gcaattatgc cctatagtaa catcatctcc tatgcaagta ggaaagcctg catcttttaa
    10501 acttccatct ttattaaatt ctctatgcca cacatggata gtggttaaat cttgtatatt
    10561 tgttctttta ccgattttaa taaaattaac atcgcctctt agaacacaat taaaccacac
    10621 actgctttca tcacctatct ctacttctcc tataatctta gcaccctctg caacaaagac
    10681 attttgaccc aaatttggaa atttatcttt aaatcgaata agcattttca tcctttttta
    10741 tttttagtat aaccaaaata tcaataagaa aaacaaattt tttagttttt aatcaaattt
    10801 tgaaacttta ttcgttacaa tttgccattt acgaggagaa aaaatgaacg catttgagca
    10861 aaaacgatgt caaagtatgg ccgaagaaat cgcacaaaaa atattcatca acgaagaact
    10921 ttttaatgct ttttgtcaaa ttccacgcga aattttttcc ccgcttaaag cccatgctta
    10981 tcgtcttgat gctttacctt tagctaattc tcaatggatc agctctcctt taaccgtggc
    11041 taaaatgact atggctttaa attttaaaga tgcggacagt gtcttagaaa taggctgtgg
    11101 aagtggttat caagcagcga ttttaagcaa ggttataagg cgtgttttta ccatagaacg
    11161 catagaaaat ttagccaaaa aagcagcaca aacctttaga gaactcgagc tttttaatat
    11221 taatgttaaa tttgaagatg gacaaaatgg atggaaaaat tatgcgcctt atgatagaat
    11281 tttattctct gcttatacga cacaacttcc tgaaatttta ctcgatcagc taagtgatgg
    11341 gggcatactt gtagccccta ttttgcacaa tggcaaacaa tttatcacac gcataaccaa
    11401 aaatggcact catttacaaa aagaaattct agaagaatgt ctttttgtac ccatagtaga
    11461 tggaaaagaa taaattttta tcaataaaaa atttattcaa aacttttaaa aacctttctt
    11521 agcttctcgc tcatttcatc tatatggctt ttttctatga ttaaaggggg taaaaatctc
    11581 aaatcattct ccccacaact gataagcaaa agagaatttt cttgacattt tttaatcacc
    11641 tcagctactt ttacactttt atcaagacta agcccttgca taaaacccaa accttttctt
    11701 tttttacaaa acctgaattc tttgataaga ttttccaaac tttgctctaa ataaggcgta
    11761 agtttagaaa cattttctaa aattttttct ttcttaaaaa tttcaaaaac cgcattaaca
    11821 cctgcacaaa ctaaaggatt tcctccataa gtacttccat gatcgcctgc ttctaaggat
    11881 ttttgtgcta ctttttcgct cactacaaaa gctccgacac taagcccaca tcccaaagct
    11941 ttagcagaag tcattacatc aggtaaaatt cctgaatgct cgtaagcaaa aaatttacca
    12001 cttcgcccca tgccgcattg aatttcatca gcgattaaca atatatcttt ttcatcgcaa
    12061 agctttctta aagccttgta aaaatctttt tgagcaggat tgacaccacc ttctccttgc
    12121 acactttcta agataatagc acaagttttt tcattgacta agcgttctac gcttgaaaaa
    12181 tcattatact ttgcaaattt aacacctgaa attaaaggct tgaatggttt ttggtatttt
    12241 tcattagcgg ttaaagataa agctcctagt gttcttccat gaaaagaatg tttaaaggct
    12301 atgaaatttc cacccttgat acctttatta aaagcatatt ttctagcgac cttcatcgct
    12361 ccttctatac tttctgctcc tgaatttgtg aaaaatacac gctctaagcc actcgcttta
    12421 gctaaatgct tggctgcttg ggctatgttt tcattataat ataaattgct agtatgtaaa
    12481 agtttatcaa cttgggcttt aatcttagca ttaaattcag catggttata tcctaaagta
    12541 catacaccta taccacttga aaaatcaaga tattttttac ccttatcatc taaaaggtaa
    12601 accccttctc cgctttctaa aactatatca aaacgcttat aagtagggat aatatgactt
    12661 tgctctttat aattcatttt catcctttaa cccactaaag tcccaatacc ctcatcggta
    12721 aaaaattcaa gcaacaaaga atgcttcacg cgtccatcta aaatatgcac tttcttaact
    12781 ccactttcat aagcatctat acaagatttt aattttacat gcataccgcc ttgaattttg
    12841 tcaaccaagg cttttgcttg ggttatagaa attttagaaa ttaaagaatt tttatcttca
    12901 aaattctcat aaagtcctgc agtatcggtt aagaaagcaa gtttttccgc ctttaaagct
    12961 ttggcaatag cacaagctgc atcatcggca ttgatattgt aagtattgaa attttcatcc
    13021 attccaatag gagctatgat gggtaaaaaa tctttttcta agagatcttg caaaacactt
    13081 gaatttacct tttgtatctc gcctacaaaa cctaaattct catccttttg cacgcattct
    13141 aaaagtcccc catccttgcc acaaagccct atagctttaa cacctaaatt ttgcaagctg
    13201 tgaactaaat ttttattgat ataatttagc accatacttg ctacttctgc tgtggcttga
    13261 tcactcaccc taagtccgtt attaaactca ctttttacgc ctaatttttc acacattttg
    13321 gagatatctt tacccccacc atgaacgata ataggcttta agcctacaag ctttaaaaga
    13381 gctatatctt gcatcacaca atgtttaagc tcctcatttt ccatagctga gccgccgtat
    13441 tttataagta taatttttga gctgaatttg cgtatataag gcaaagcttc gattaagaca
    13501 tttgcttttt ctaaatattt ttgcatgatt taccctcaaa cattaaaact agtttgattg
    13561 tgagaattga gcgataaatc ataataattc gcatcttctc ttaaggtaaa accataatgc
    13621 ttccaaaact cattacccaa atcattgctc ttaaaggcta tcaatgcgat cttgttaatc
    13681 ttctcagatt ttaatgcctc aaggcaaaat tttgtcattt catgggctat accctttttt
    13741 ctgtgatctt tatgcacgca cacatgataa aaacctcctg tgcgaccatc atgcccacaa
    13801 agtatacttc caacaatttc ttgatcaatc acagctactg cgctaaggtt tgggtttcta
    13861 tctaaaaatt tttctatatt ttctttacta tcatcaatcg atcgaattcc aaaacctttg
    13921 atatcacacc aaagcttgta aactccttca taatcacttt tttgcattgc tctaacttgc
    13981 aatttttatc ctttacaaat ttgcaaagaa tttaagtcct tcatcttcat caaaatcaaa
    14041 cattaaattc atattttgaa cagcttgtcc tgctgcacct ttgattaaat tatcaatagc
    14101 acctaaaaca ataatacgat ttgtgcgttc atcgatgctg aaatttatat ccgcaaaatt
    14161 gcttgattta acccaccgag tctgcggaaa cgactgcggt ggtaaaagcc ttatgaattt
    14221 cctgtcttga taatattttt gataaatttc acgaatttct ttttcactta cagaatgttt
    14281 taaatttgca taagcagtag ttaaaattcc cctttgcata ggtactagat gaggggcaaa
    14341 ttgtaaagtg attttctctc ctgctgcata gcttaaatgc tcttcgattt caggggtatg
    14401 gcggtgtgaa gctaatccat aagccttgat attttcattt acctcacaaa aaagattttc
    14461 tacttttgca cttcttcctg cgccgctgac tccacttttt gcatcgataa tcaccgaatt
    14521 taaatcaatc atcttttctt taaaaagcgg ataaagacta agtatagagc aagtagtgta
    14581 gcaaccagga tttgcgatta aatttgcatt ttttatctct tcttgataaa gctcacaaag
    14641 tccataaact gcatttttta aaagctcttg attaggatga gtaaatttat accaaagctc
    14701 ataatcttta ggatttttaa gacgaaaatc agcgcttaaa tctatgattt tcatcttttt
    14761 taataaagac tcgctaaaaa gtttagcact aaattcatgc ggagtagcgg taaataagac
    14821 atcaagttca agttcatcta aatttttatc ttcaaaattt aaatttaaag gcgtgttggg
    14881 ataaagcttc atatagcttt gccccacact tgaactagaa cctatatagg aaatttctac
    14941 tttaggatga ttcagtaaga tacgcacaag ctcattacct gcatatccgc ttgctcccaa
    15001 aattcctact tttaatctca ttcctagtcc ttactgaatt tcaaatggct taattataga
    15061 caaaaaatgc ttaaaataac acttatgggt ttataaaatt tgatagactc ttacaaaaat
    15121 actcatatat ctcaaaaatt atcacgaagc tttttgtata caaagacaat ggacgctaag
    15181 atttgctact agattttaat gccttttgat ggattaataa attaaatatt ttttttaagt
    15241 atgtataatt gttcgtgtat atgaatggaa cgatttttaa gattgcgaga ggctctaaag
    15301 gtcgggtatt tttgctctaa aatttgacat ttacctaagc tttgcaaacg ctttagaaat
    15361 ttttctttct ttacaaaacc ctcacaatta taagaaagca aaatgatttt ggcttttaaa
    15421 tcattgataa gctcaaacaa agcatcttct gcttgttttt ctttattaaa aatacttcgg
    15481 ttccaatctc ttggtatacc agaaatcttt gaaatttcat caggcctttg ataatttgcg
    15541 attaaattaa gcataaaata attcgaacta taagggtgtt gattataagg aggatcaaga
    15601 taagccacat cgatattttc aagctctttt gcaagtaagt tagcatcctt ttgcaccact
    15661 tcaaattcac aagaaaaatt tgaaaaaata ggcattttaa gctcgatatc acctttgata
    15721 cgctttaagg cattttgcgc ctctccacca aatttaccca ctccatctct acccttataa
    15781 aaacccttaa aaactccact agtatttgaa tgcacacttg cttcatagat taaaggcgct
    15841 ataaaaaaat gctttaactc ttcaggaatt tccttttcga ttttttgtct taaagtatca
    15901 agatataaag catttttaag agtataaaaa acgcgttcat ctttttggat gcaaacctca
    15961 ttctttggag catagagttc acttataaaa cctgcttgaa attctaaatt ttgggttaaa
    16021 attttatgat aatgttttaa aagctcggtt aaatttttat ctttattaga aagataacat
    16081 ttgttgataa gtttggaata attttctaaa tcattggcta aaatataatt tgagtgtgct
    16141 tttgcaaaac gacttacaac acctgagcca ctaaatatat cacaaaaact aaatttatct
    16201 ttaccaagtt cttttttagc taccttaaag cccttattta aaaatcctaa aagtgctctt
    16261 ttattgccta aataagtaat gatttgttct tttaaaaaag agggattttc cttcaaaatt
    16321 tttaaacctt taaaaagctt atctgtaaaa acagattaag ctttttttgg agttacaagc
    16381 atattaacat agcgtccttc aaaatttggc tctttatcac gattagcatc attctctatc
    16441 atagtccaaa ttttttcaag caaagctaca cctgcttcag gagtcgccat ttcacgccct
    16501 tttaagaaca cacgaaatct cacatgctta ccttgttcta aaaattctaa agcatgtttt
    16561 actttgtaat ttatatcatt ttgagcaatt ttcacagaaa gtttaatctc tttaatatcg
    16621 attacttttt gttttttctt tgcttctttt tgcttttttt cttgctgata acggaatttt
    16681 ccataatcca taatcttaca aacaggtggc tttgcatctg cagctatcat tacaagatca
    16741 agtcctaaac gatttgcaat ctctaaagct tcatcactgc tgataatgcc atatgctttg
    16801 ccatcatcac ctatacatct gatttcgtcc gctctaattt cttcgttgag caatacttct
    16861 ttttctttac tcaaaaatgt acctcactca ttttctcctt aactaattta ataaattctt
    16921 ccaagctaag atttttttgc tccttagctc ttctatctct taaagcaacg cttcgctttg
    16981 ccacctcttc atcgcccaaa actaaaatca taggtaattt ttgtttttca gcagtgcgaa
    17041 ttttcttact taagctctca tttttctcat atacttcgct atcgatattt aattctagca
    17101 aggctctttg aatttctttc gcataagcaa tatgagaatc agaaatcggc actataccca
    17161 ctgcggttgg tgcgataaaa aatggaaact cccctgcgca atgttcagtt aaaattccta
    17221 taaatctttc aaaagaaccc aaaatcgcac gatgcaacat tacaggctgc tttttctcat
    17281 tgttactatc tgtgtattct agcttaaagc gttcaggaag attaaaatct acttgtatgg
    17341 taccacactg ccattttctt tttaaagcgt cagtgatttt aatatcgatt tttggcccat
    17401 aaaaagcacc tccaccctca tcaatgccat attttaagcc ttgttcatct aaggcttctt
    17461 ttaaagcttt agtagctgtg tcccaaattt catcatcacc tatggctttt tcaggtttag
    17521 ttgaaatttc catttcatag ctaaaatcaa ataatttcat caaattatcc acaaaagcta
    17581 aaatttctaa aacctgctct ttaatctgac ttggcataca aaaaatatgt gcatcatctt
    17641 gagtgaattc tctcactcta aaaagtccat gcaaaacccc acttttttca tgacgatgta
    17701 ccacgccgta ttcaaaaaat ttcaaaggca aatcacgata acttcttaca tcactttgat
    17761 aaattttaat atgtcccaca cagttcatag gcttaatgcc atattcttgt tcatcaattt
    17821 gtgtaaaata catattttct ttatagtttg cataatgccc gctgattttc catgcatctg
    17881 cttttaaaag ttcaggccca cgcacaggct cataaccacg caagcgatga attttataaa
    17941 gcatatgttc aagtttagat ctaagtcttg caccattgct taaccaaata ggaagtccac
    18001 ctcctatctc atcatcaaaa gtaaagagtt taagttcggt tcctaatttt ctatgatcgc
    18061 gttttttagc ttcttctatg attcttaaat gctcttttaa actctcttta tctgcaaaag
    18121 cagtaccata aatacgcgta agcatttctc ttttttcatc gccaccaaga taagctcccg
    18181 cgacgcgtgt aagtgagaag ttgcgtaaaa atttggtatt aggcacatga ggaccacgac
    18241 aaagatcctc aaattctcct tgtttataaa tacttacttt tccatcagga atacggagta
    18301 aaacttcttg ttttaaatca tcgtctttaa atttagcaat agcttcgttt tttgtgattt
    18361 catatttttc gatttcttgt ttggcttcgg ctaattcttt catctttttt tcaatttttg
    18421 ctaaatcttc ttcgccgatt ttagaattca cacgaaaatc ataataaaat ccatcttcta
    18481 taacaggacc aacgaaaaat ttagcctcag gatacaaact cttaatcgcc tgtgccatta
    18541 agtgcgcaca agaatgacgg attacttcta aactttcttt agaattatca aaataaattt
    18601 cttttaaatc agtagaattc ttactttgag aatcaactat tttttcatca tctaagtatg
    18661 caataacttc tttttccata acttttaacc ttattttgct cactgactct gtgagtgttt
    18721 ataaagttct aattttagct ttctaagact taattttttt tgaaattcag cttattttta
    18781 aaaaaatctt agaataaatt taatatttgt ttataactta aactcactcc cagaatttaa
    18841 aattccgcta taatacaaat aaaaaaataa aattcccaac actatcctat aaattccaaa
    18901 aggaataaaa tcaaattttg aaatgaattt taaaaagaat ttaatcacaa aaaccgctac
    18961 cacaaaagct gtaacaaagc ctatacttaa agggattaaa gcattagcgt tgctaagaag
    19021 ttcaggttct ttgtaaatac tataagcagt tgcaactatc atcgtaggga tagcaagcaa
    19081 aaagctaaat tcagctgctg ttttgcggtt aagtcctaat aaaagtccgc ctataatact
    19141 tgctccactt cttgaagtac ctggaatcat tgctagagat tggataatac ctatgcaaaa
    19201 agcttgtaaa aaactcactt tttctaaaga attggttttg tattctttat ttttatgagc
    19261 taattcaata acaataaaaa caataccacc taaaataagc atcacaacta ctacatagcc
    19321 attaaaaagc tcttttaaat acttataaag cacaaatcct ataagccctg taggaaaaaa
    19381 accaactgca agtttaaacc aaatatcaag tcctttaaaa agcttacgcc aaaacacaaa
    19441 aagcactgct aaaatcgatc ctagttgtat aatgattaaa aaacttttcc aaaattcatt
    19501 aatatcaata cctaaaatag tcgtccctaa aatcatatgt cctgtagaag aaatgggtaa
    19561 aaattcagtc aaaccctcaa tgattcctag tattaaagca tgtaaattat ccatattttt
    19621 ccttaaaata aaaaaagaat tctacaaact ttttttaaac acgacaaaaa tataaaaaca
    19681 atttcttaaa gcagacgata aaaataaact atttgtatga aaaagctgat taattttgag
    19741 ttttatttct cattttactg gcttgggtaa gaatacaatt ttttactatt ggagcatttt
    19801 atactttgga tca
//
LOCUS       DAQUWA010000034        18746 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.034, whole genome shotgun sequence.
ACCESSION   DAQUWA010000034 DAQUWA010000000
VERSION     DAQUWA010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18746
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.034"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..1064)
                     /locus_tag="R8X70_001028"
     CDS             complement(<1..1064)
                     /locus_tag="R8X70_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928812.1"
                     /translation="MSIFSINDNSNYGSILSQAKANKESKENSKISFANAFLKQNASK
                     LNEIQNANSQTLARSEVLNSTNTTNTSNNTNFSISSKTNSPNYDISSEFKNSIYTLKY
                     KQADISNTSTNTAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIYSFNTSFKEH
                     TANDLGVSNYYTNIDMADTIRQYYSKFNQIINHSFGNSNKTSFSVEDLNSLPKGYSIH
                     NTDFKFMFQNLDSQTITNFYNTQERYNEAEQLGMFGHINIGLQPLNFTPQSMQTQNLD
                     ENSAKYTFNPDMSVYPQNEDGSYSKEALFMSFLKSSGGEALEGGNTTLNPLVKAHIEA
                     MTKESFDGSLASLDDIMTGKV"
     gene            complement(1171..1611)
                     /locus_tag="R8X70_001029"
     CDS             complement(1171..1611)
                     /locus_tag="R8X70_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928813.1"
                     /translation="MLKKLLSVVALGALLSSSAFAEDILAKVSNGAISDNSAGVKVLS
                     LDEMKEVKGGVYTFNRASNYDNVIGVRSYAYIAGDSDKTPEQFLQAMNISGNKIILAK
                     YRYVNNRKEHYLQSYDKSSGRLNDIWAWNGSYALQVLNDFKKRY"
     gene            1986..2840
                     /locus_tag="R8X70_001030"
     CDS             1986..2840
                     /locus_tag="R8X70_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928814.1"
                     /translation="MKKIILILAVLSGCLFASDELNIDSLFKKQIGLRSITSLSLLST
                     GNPHSYYIYPNIGVNGDLNVWNDTKQLYLNQTFIYTLTPNFDLLISGGGNYARQEYNN
                     IISGAFTSKNTLNFDSLWIGFIYTGESIADFVPQIKFQTAIIQREKTVLQTKNFYFQS
                     QNLEASLRGYSDPVVYSIYTGFGYNAQRKFKIAKIDYGNSIYFGGNLSIILSPKITLD
                     LGAEQRFQTEQKINGVKNSEIRSIPTISGGSTYSINQDTAVSVSASLGGSSAAPDAIF
                     GINLWKKF"
     gene            2825..3418
                     /locus_tag="R8X70_001031"
     CDS             2825..3418
                     /locus_tag="R8X70_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEF2928815.1"
                     /translation="MEKILKIALMVALLPLFLKAEFVVKSYQEIKNEKVVRQNYEESC
                     GAASLATLINTLDDNNLTELDLLKTMSGQKLYTDMVSFADLNDAVKKLGYESKSYKVD
                     RKILENIISVPILVKIEDDPRFPHFVVIINHKGNYLQILDPSYGEYISSKREFYSVWD
                     RYNKGGFALVVNPKKQLKDYKLNLPKPLNFEIEHFGF"
     gene            complement(3461..4756)
                     /locus_tag="R8X70_001032"
     CDS             complement(3461..4756)
                     /locus_tag="R8X70_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928816.1"
                     /translation="MSIFSINDNSNYNSILSQAKASKESKENSKISFANAFLKQNASK
                     LNEIQSANSQTLIRSESLNNNLNSNFDTNYGLFSDFQNTVHTLKYKQADLNNTSSLAY
                     GYSVDKNGYMGSDFNKAAGLPEDFKIHKSTLDEIERVAENNFYDTKTKEYLGVDKYYD
                     NIDMAETIKQYYNLFSNALSQSFPNDKTSFSEADINSMPSGYAVGGDKCMNFNDPNNR
                     MNITHLKDFSGALVSNVYQTPEQVKEADDLWADSGNMINGLKPQTLGLSLEEIKNVSQ
                     AKYECDFKPDMSFYPKNEDGTYTKEALFMSFLKSYGSGQPVESPKTTLNPKVEAYNRA
                     MAKESFSTTSVDIGDIMTGKVDFASLLKYELDRGYMAGELYMYEKGISPKQALGNWAL
                     DAEIKQALANGWKASSESINSYVDSIMDRLNNLMGQTKV"
     gene            complement(4846..5565)
                     /gene="kdsB"
                     /locus_tag="R8X70_001033"
     CDS             complement(4846..5565)
                     /gene="kdsB"
                     /locus_tag="R8X70_001033"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEF2928817.1"
                     /translation="MIIIPTRLASTRFPEKILCDIGGVPMFIATAKQVSSVDEVCIAV
                     DDEKVLEIAKQYGFKAVLTSKNHESGTDRINEACKKLGLKDDEIIINVQADEPFIECE
                     NLAKFKEFANSCLKQEAFMASCYKDISKDDASDPNLVKVVCDKNDFALYFSRAKIPYE
                     RADYEESFKGHLGIYAYNVKALREFCTLENSALEKAEKLEQLRAIENGKKIKMLQINT
                     SSMGIDTKEDYERALRIYLGK"
     gene            complement(5562..6974)
                     /locus_tag="R8X70_001034"
     CDS             complement(5562..6974)
                     /locus_tag="R8X70_001034"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEF2928818.1"
                     /translation="MLLVESRNINNKVDFKNALVNPNAPQGGLYSPLSLPQFDGEKYA
                     NLSYKEFALKLIESFEFGHEALFDKALKSYEKFDDKNSPIALKKIKDKIYINELWHGP
                     TRAFKDMALQPFGVLLNEFSQNEKILIICATSGDTGPATLKSFENLENIKVLCMYPKG
                     GTSAIQELQMRALDKGNLKVFAIRGDFDDAQRTLKNLLAKETFKDELSKVGYGLCAAN
                     SVNFGRILFQIIYHYYASLKLYHEFKEEIEILIPSGNFGNALGAYYAKLMGAKISKIK
                     IVSNANNILTDFFTKGEYDLRDRSLKKTISPAMDILISSNIERLLFSKFSDLRTNELM
                     NLLKTEKYFKLEKEELQSLQEDFEADFCTDEECMKFIKESKILIDPHTATCFKMLDTS
                     KPSIITSTAEWTKFTPSMVKALFGRECKDEKADFELLAKEFKVDIKKDLLELFDLKNA
                     DEKVYEIGDIEGEILEWIKK"
     gene            complement(6961..7893)
                     /locus_tag="R8X70_001035"
     CDS             complement(6961..7893)
                     /locus_tag="R8X70_001035"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEF2928819.1"
                     /translation="MNEEKKYQLWLDNYFFKPSFFQKCLAFIFLPLSLLYGLCAILNT
                     CFRQKIDFKKPIISVGNLSFGGNGKTPICKAIAREFEGVFIVLRGYRRKSKGLLVVKN
                     ENAILAQVSQSGDEAMEYAFEECVKGVIVSEDRVAGIQKAFELGAKIVLLDDAFSKFH
                     IQKFDILLESKIKPYFNFTLPSGAYRLPKFYEKKADFIACEGRDFIRYSYVKENPKAV
                     LVTAIAKPFRLYEHFIKARVCYFFKDHYEFKKEELQALLDKHHCDTLMLTFKDYVKVK
                     DFGFKCQIIELNIELKENFKEKLYQYIRSFNVAS"
     gene            complement(7893..8639)
                     /locus_tag="R8X70_001036"
     CDS             complement(7893..8639)
                     /locus_tag="R8X70_001036"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEF2928820.1"
                     /translation="MDCEKISQTLCEFIQHKVKDSGLNGVVLGLSGGIDSALVATLCK
                     KALGENVFALLMPTKFSNQENLNDALKLCQELNLKYKIIEIQDILEAFLKQSENTDEL
                     SRGNFAARIRMSLLYDYSALKKALVVGTSNKSELLLGYGTIYGDLAYAFNPIGELYKS
                     EIYGLARYLNLNEKFIQKAPSADLWIGQSDEKDLGFSYELIDKGLKALENQDMKALEN
                     LDKKLLDMLQSRIKNNAFKRNMPEIASLNK"
     gene            8713..9309
                     /locus_tag="R8X70_001037"
     CDS             8713..9309
                     /locus_tag="R8X70_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEF2928821.1"
                     /translation="MQILKQACGPYETNCYILNTSKGDFIIDPGVNALSFIKQYAKKP
                     LAILNTHGHYDHVWDNARVKKEFDIPIYIHKNDEFMLQDPFGKGFEPSKADVLIENED
                     ELEISNTRFKFHFLPGHTPGCTMIELMGENLMFSGDFLFYRSIGRWDFPYSDANLMKQ
                     SLEKVMTYKEDFRLLPGHGQETSFRAEQVHLPSWLRYF"
     gene            9321..9626
                     /locus_tag="R8X70_001038"
     CDS             9321..9626
                     /locus_tag="R8X70_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928822.1"
                     /translation="MNLDFVLLCFFVFLDAFALLGLLLGNKKKNQFNDKKFYKICPCK
                     QMAENGSLSTICIYSAVGGFFYSVLSIGYIGFGDLFLNLIFLFTLLSAYMGWKLKLD"
     gene            complement(9734..10513)
                     /locus_tag="R8X70_001039"
     CDS             complement(9734..10513)
                     /locus_tag="R8X70_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HEF2928823.1"
                     /translation="METEFKGKTLVISGGTRGIGKAIVYEFAKVGANVAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDMDFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SPLNRMGQPEDLAGACLFLCSNKASWVTGHTFIVDGGTTFK"
     gene            complement(10513..11409)
                     /locus_tag="R8X70_001040"
     CDS             complement(10513..11409)
                     /locus_tag="R8X70_001040"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEF2928824.1"
                     /translation="MDKNIIIGAMTALITPFKNGKLDEQSYARLIQRQIDNGIDAVVP
                     VGTTGESATLTHEEHRTCIEIAVDICKGTKVKVLAGAGSNATHEAVDLAQFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIANSVDIPVLLYNVPGRTGCEICTETIIKLFRDCE
                     NIYGVKEASGNIDKCVDLLAHEPRMILISGEDAINYPILSNGGKGVISVTSNLLPDMI
                     SKLTHLALEENYKEAKKINDELYNINKILFCESNPIPIKTAMYIAGLIESLEFRLPLC
                     SPSKENFVKIEEVMKKYNIKGF"
     gene            complement(11412..12653)
                     /locus_tag="R8X70_001041"
     CDS             complement(11412..12653)
                     /locus_tag="R8X70_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEF2928825.1"
                     /translation="MIDYSKITLKNKLDVYTFPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCSKKNLDKTL
                     ELFAELMENLSLKDEEFQPERSVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSTYYQPKNAILIVSGDIDSEEVFSGAKKHFEKIKNTKPI
                     PKIHTKEPKQDGAKRIEIKKPTQTELLAIGFKIPNFKHKDIPALNALAELLGNGKSSM
                     MNEILIDELNLVNEFYSFANDCIDENLFIFICNCNVGVKAEKVEQELWKIIDRLKKGD
                     FSSKDLQKVKNNVKSDFIFSLDTASAVSNTYGSYLARGDLKPLLEYESNIAHLCEQDL
                     VKSAKKYFDRSNSTTLILRKD"
     gene            complement(12650..13708)
                     /locus_tag="R8X70_001042"
     CDS             complement(12650..13708)
                     /locus_tag="R8X70_001042"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEF2928826.1"
                     /translation="MLYNFIKPLLFKLDPENAHALVEGSLRSLNATLPGSLSFFAYNY
                     IVNDDSLKQKLLGLDFNNPVGLAGGFDKNATMIRPLAALGFGFLEFGTFTPKPQEGNE
                     KPRLFRLVKQESIQNAMGFNNQGAEKIAARLSKIYPFVLPLGANIGKNKITSNDKALE
                     DYFTLFRNFKDLCDYFIVNISSPNTKNLRELQNDDFLSHLLEEARKITNKPILIKIAP
                     DMPIDSALKLCENAILKGADGFIIANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKD
                     LAKVLFGKTLLIASGGIDSGELAYERIKNGANLIQVYTALIFKGPSLVRDINKTLIEL
                     LKQDGFMHISEAVGANLK"
     gene            complement(13754..15487)
                     /locus_tag="R8X70_001043"
     CDS             complement(13754..15487)
                     /locus_tag="R8X70_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2928827.1"
                     /translation="MHKDMTLKDVLIRFKPFYKKYKKEFAIAIFGMILTSIGTAGSFA
                     SLKPILDYIFVEKNEALLYTLPFLLVIIYILKNLGFYLQTYYLSFIGMDTLRILRFKV
                     LKNLLKLDMDFFKRNRSGELVSRCTNDINALQSIVSNIIPDFFRELLTIVGLLIVVFY
                     QSPILAFFALVVLPCAILPLVHFARKLKKYARSIQETNSDLLSRLSEIFSNIELIKAS
                     NTQNKESEKFAKQNNELCRLNLKSTRIDALTSPLMEIIGSLGVAAVIIIGGREVIHGT
                     MSVGSFFAFITALFAIYTPLKRLSSLYGRLQGAIAASERTFYLLDLEPQILNGSKNLE
                     SIARIEFKQVDFAYENPYKSVLKDINFEFNKGEILALVGTSGGGKSSIINLLMRFYDK
                     QKGEILLNDLDISEFSIESLHDRIGLVTQNIYLFNDSFAENVAYSEEPNKEKIIKALK
                     LANAYEFVQEMGGIYAEIKEHGKNLSGGQKQRIAIARALYKNPDLLIFDEATSALDNE
                     SEKAIIETIENLKKDRLVLMIAHRLSTIENADKIAVIDQGQMIAIGSNEELLQSCELY
                     QKFKNKEVDKV"
     gene            complement(15488..16870)
                     /gene="cysS"
                     /locus_tag="R8X70_001044"
     CDS             complement(15488..16870)
                     /gene="cysS"
                     /locus_tag="R8X70_001044"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEF2928828.1"
                     /translation="MKLMDSVLKEKIELDQDNVNIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLSLGYRVQFARNYTDIDDKILKKMSESGKSLNELVEFYIANYERDMKALNVL
                     EPDFKPRATYYIEPMLDLIHKLSKNGFTYTLEDGVYFDTSKDEDYLSLSHRNTEENVS
                     RLSNEVEKRNESDFVLWKFDENFYDSEFGKGRPGWHTECVAMIDSIFGDTLDIHAGGV
                     DLLFPHHENEAAQCRCACKRTLAKIWLHNGFVKINGEKMSKSLNNSFFLKDALKDFMG
                     EALRFYLLSSHYRAHFNYSLDDLENVKKRLDKFYRLKKRLAVGKTPDFGILNDIEIHS
                     NIAKQILEVLSDDLNISKALALLDEFITNANLELDQQSKNKELKQKIKEALSELAKIF
                     GFGFMDENLYFQWGVAKELKEKIQDQILQRNEAKKNKDFAKADQIREDLLKLGIALQD
                     TPQGTIWEKI"
     gene            complement(16870..18321)
                     /gene="murJ"
                     /locus_tag="R8X70_001045"
     CDS             complement(16870..18321)
                     /gene="murJ"
                     /locus_tag="R8X70_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEF2928829.1"
                     /translation="MKSLVFKNFIINALGILFSRVLGLARDVLIALFLGAGIYSDIFF
                     VALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMYQFSVIVFLFCLLVSFFS
                     SFFTKLFAFGFSSDTIALASPLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAAL
                     FNLSIVIAAFFVDKDAPQDTLYYFSYATVLSGVAQLILHLMVLRKNPVIRAMALSVKF
                     RRAKAKLEGFYSNFFHGVLGSSATQISSLLDTTIASFLMTGSISYLYYANRVFQLPLA
                     LFAIALTQVSFPKILKHLKSDQENLALSFMQRALAVLSILLIVSSIVGSVFALEISKL
                     LFERGNFTHEDSIITAYILIAYLIGLLPFGLQKLFSLWLYAKFKQKTAAFIAFKALLI
                     SALCSVLFIFLIKDESLKVIAVALSSSLSAFYLLIANIKEFGFKNFFALISFKFCFLM
                     ITGLVVFTILLYEIKPYLIEALLWIVASVKGVF"
     gene            18425..>18746
                     /locus_tag="R8X70_001046"
     CDS             18425..>18746
                     /locus_tag="R8X70_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HEF2928830.1"
                     /translation="MALDEKIISYTENPSRELLSVASRTNIALNELDFHLLAFSTQYR
                     LENTEWIKIAEKDLTLFEKDEVFLKEDLQIKQEYKIEIFHQTRQDKTANTIKLIANKN
                     LTKIV"
BASE COUNT         6377 a         3328 c         2435 g         6606 t
ORIGIN      
        1 actttgcctg tcataatgtc gtctaaggaa gctaaagagc catcaaagct ttctttcgtc
       61 atagcttcaa tatgtgcttt aactaatgga tttaatgttg tattaccacc ttctaaagct
      121 tctccaccgc tagattttaa aaaactcata aacaaagctt ctttagaata acttccatct
      181 tcattttgtg gataaactga catatcagga ttaaaagtat attttgcact attttcatct
      241 aaattttgag tttgcatact ttgcggagtg aaatttaatg gttgtaagcc tatattaata
      301 tgcccaaaca ttcctaattg ttctgcttca ttatatcgtt cttgtgtatt atagaaattt
      361 gttatagttt gactatctaa attttgaaac ataaacttaa aatccgtatt atgaatacta
      421 tacccctttg gtaaagaatt taaatcttct acactaaagc tagttttatt agaattacca
      481 aaactatgat ttataatttg attaaatttg gaatagtatt gtcttatggt atcggccata
      541 tctatgtttg tataataatt tgaaacgcct aaatcgtttg cagtgtgttc tttaaaactt
      601 gtattgaaac tatatatctc atccaaagta gatttatgta tcttaaaatc ttcaggcaat
      661 cctgcagctt tgttaaaatc acttcccata tagccatctt tatctacact ataaccataa
      721 gctgtattag tagaagtatt acttatatct gcttgtttat attttagagt ataaatagag
      781 tttttaaatt cacttgatat atcataatta ggagaatttg ttttactact tatactaaaa
      841 ttagtattat tgctagtatt tgttgtatta gtagaattta atacttcact tcttgctaga
      901 gtttgtgaat ttgcattttg aatttcattt aatttactag cattttgttt taaaaaagca
      961 ttagcaaaac ttattttaga attttcttta ctttctttat tagcttttgc ttgtgaaagt
     1021 atagaaccat agtttgagtt atcattgatg ctaaagatac tcatattaat tccttaattt
     1081 agatttttct gccttcaacc taaatatatt aaaataatat aagcaagatc tgttccattt
     1141 tggaataaaa tggaacagaa taagagagaa ttagtatctt tttttaaagt cgtttaaaac
     1201 ttgaagtgca taagagccat tccaagccca aatgtcatta agcctacccg aacttttatc
     1261 gtaactttgc aaataatgct cctttcgatt atttacataa cggtatttag caagaataat
     1321 tttattgcca ctaatattca tagcttgtaa gaattgttct ggtgttttat cactatctcc
     1381 tgctatatag gcatagctcc taacacctat aacattatca taattacttg ctctattaaa
     1441 agtataaaca ccacccttaa cctctttcat ctcatcaaga ctaagaactt taacacctgc
     1501 actattatcg ctaattgctc cattactgac tttagcaaga atatcttctg caaaagcaga
     1561 acttgacaat aaagcaccta aagctacaac acttagtaat ttttttaaca ttttagctcc
     1621 ttgttttaaa atgtaatata attcatttta tcataataaa taccctaaat caaatttaat
     1681 caaagtatta tgttatagat atttaaaaaa tatatataat gattttatgg tatttgtgaa
     1741 agttttttat tttttaaaaa aatgtataaa attgtaataa agctaatcta aaatataaac
     1801 aaataatttt ttatattgta ttacaattta actcaattaa tcttgcgatg gacaagtgct
     1861 aggaataatg agattaaaag agatggataa tttataaaag aaaggaataa aatataaaga
     1921 atatactaaa aatttggaac gctccttgct taatttttca aagcaatatt ttaaaaggta
     1981 ataaaatgaa aaaaattatt cttattttgg cagttttaag tggttgtctt tttgctagtg
     2041 atgagttaaa tatcgatagt ttgtttaaaa agcaaatagg cttaagaagt attacaagtt
     2101 tatccttgct tagcacagga aatcctcact cttattacat ttatccaaat attggagtaa
     2161 atggagattt aaatgtttgg aatgatacaa agcaacttta tttgaatcaa acttttattt
     2221 atacgcttac acctaatttc gatttactta tttcaggcgg tggaaattat gcaagacaag
     2281 agtataacaa tattatttca ggtgctttta caagcaaaaa tactttaaat tttgattctt
     2341 tatggatagg ctttatttat acaggagaaa gcattgctga ctttgttccg cagattaaat
     2401 ttcaaacagc gatcattcaa agagaaaaaa cagttttgca aactaaaaac ttttattttc
     2461 aatcccaaaa cttagaggca agtttaagag gatatagcga tccagtggta tatagtattt
     2521 atacaggatt tggttataac gcccaaagaa aatttaaaat cgcaaaaata gattatggca
     2581 atagtattta ctttggtgga aatttatcta taattttaag ccctaaaatt actttggatt
     2641 taggagcaga acaaagattt caaaccgaac aaaaaatcaa tggtgtaaaa aattcagaaa
     2701 tcagatcaat tcctacaatt agtggcggtt ctacttatag cataaatcaa gatactgctg
     2761 tttcagtcag tgcaagtcta ggtggaagct ctgctgcacc tgatgcaatt tttggtatca
     2821 atctatggaa aaaattctaa aaatagcatt aatggttgct cttttgcctt tgtttttaaa
     2881 ggcagaattt gtagttaagt cttaccaaga aatcaaaaat gaaaaagttg taaggcaaaa
     2941 ttatgaagaa tcttgtggtg ctgcttcttt ggctacgctt attaatacac ttgatgataa
     3001 taatttaaca gaattagatt tattaaaaac catgagtgga caaaaacttt atacagatat
     3061 ggtaagcttt gcagatttaa atgatgcagt aaaaaagctt ggctatgaaa gcaagtctta
     3121 taaagtcgat agaaagattt tagagaatat tatatctgtt cctattttag ttaaaattga
     3181 agatgatcca cgctttccac attttgtagt gattataaat cataaaggta attatttaca
     3241 aatacttgat ccaagttatg gagaatatat cagttctaaa agagaatttt atagtgtttg
     3301 ggatagatat aataaaggtg gatttgcttt agttgttaat cctaaaaaac aactcaaaga
     3361 ttacaaactc aatttaccca aacctttaaa ttttgaaata gaacattttg gattttaata
     3421 tcgcaattaa gcgatattaa tcctttattt taagtctttt ctaaacctta gtttgtccca
     3481 taagattatt taatctatcc attatagaat caacataaga attgatactt tcactgcttg
     3541 ctttccagcc gttagcaaga gcttgtttaa tctcagcgtc taaagcccaa ttgcctaaag
     3601 cttgcttagg agatatacct ttttcataca tataaagctc tccagccata taacctctat
     3661 caagttcata ttttaataaa cttgcaaaat caactttgcc tgtcataata tcacctatat
     3721 ctacactagt agttgaaaaa ctctctttag ccatagccct attgtaagct tctacttttg
     3781 gattaagtgt ggtttttgga ctctcaacag gttgtccgct accatatgat tttaaaaaac
     3841 tcataaataa agcttcttta gtataagttc catcttcatt ttttggataa aatgacatat
     3901 caggtttaaa atcacattca tatttagctt gagaaacatt tttgatttct tctaaggata
     3961 aacctaaggt ttgaggtttt aaaccattaa tcatatttcc agaatcagcc caaagatcat
     4021 cagcttcttt tacttgttct ggtgtttgat agacatttga aactaaagct ccagaaaagt
     4081 cttttaaatg agtaatattc attctattat ttggatcatt aaaattcata catttatctc
     4141 cacctacagc atatccacta ggcatagaat ttatatctgc ttcactaaaa cttgttttat
     4201 catttggaaa gctttggctt aaagcattag aaaaaagatt gtagtattgt tttatggttt
     4261 cagccatatc tatattatca taatatttat ccacacctag atattctttt gtttttgtat
     4321 cataaaagtt attctcagcc actctctcta tctcatccaa agtagattta tgtattttaa
     4381 aatcttcggg taatcccgca gctttattaa aatcacttcc catatagcca tttttatcta
     4441 cactataacc ataggctaaa gatgaagtat tgtttaaatc agcttgttta tattttagag
     4501 tatgaacggt attttgaaaa tcgctaaata agccatagtt tgtgtcaaaa ttagaattta
     4561 aattattatt taagctttca cttcttatta gagtttgtga attggcactt tgaatttcat
     4621 ttaacttact agcattttgt tttaaaaaag cattagcaaa acttatttta gaattttctt
     4681 tactttcttt actagctttt gcttgtgaaa gtatagaatt atagttcgag ttatcattga
     4741 tactaaagat actcatatta attcctttga tttagattct tttgccttca atctaaatat
     4801 attttataaa tcatacaagc aaaatttgtt ccaatttgga ataaattatt ttcctaaata
     4861 aattcgcaaa gccctttcat agtcttcttt ggtatcaatc cccatgctac tagtgttaat
     4921 ttgaagcatt tttatctttt tgccattttc aatagctctt aattgttcca atttttcagc
     4981 tttttcaagg gcggaatttt ccaaagtgca aaattcacgc aaagctttaa cattataagc
     5041 ataaattcct aaatgtcctt taaaactttc ctcatagtct gccctttcgt aaggaatttt
     5101 cgctcttgaa aaatataaag caaaatcatt tttatcgcaa accactttca ccaaattcgg
     5161 atcgcttgca tcatctttac tgatatcttt ataacaactt gccataaaag cttcttgttt
     5221 caaacaagaa ttagcaaatt ctttaaattt ggctaaattc tcgcattcta taaagggttc
     5281 atctgcttgt acattgatga tgatttcatc atcttttaga ccaagctttt tacaagcttc
     5341 attgatccta tctgtgccac tttcatgatt tttgcttgtt aaaaccgctt taaaaccata
     5401 ttgtttggca atctctaaca ctttttcatc atctactgct atgcaaacct catccacact
     5461 agaaacctgt ttagcagtag cgataaacat aggcacacca cctatatcac aaagaatttt
     5521 ttcaggaaaa cgcgttgaag ctagtcttgt gggtatgata atcatttttt aatccattct
     5581 aaaatttcac cttcgatatc tcctatctcg tagacttttt catcagcatt tttaagatca
     5641 aaaagctcta aaagatcttt tttgatatct actttaaatt ctttagccaa aagctcaaaa
     5701 tctgcttttt catccttgca ttctctacca aaaagtgctt ttaccatact cggagtaaat
     5761 ttagtccatt ctgctgttga agtaataata cttggctttg aagtatcaag cattttaaag
     5821 caagttgctg tatgaggatc gattaaaatt ttactctctt taataaattt catacattct
     5881 tcatcagtac aaaaatcagc ttcaaaatcc tcttgtaagc tttgcaattc ttctttttct
     5941 aatttgaaat atttctcagt ttttaacaaa ttcatcaatt cattagtcct aagatctgaa
     6001 aatttagaaa ataacaatct ttcaatattt gaagaaataa gtatatccat agctggagaa
     6061 atcgtctttt ttaaacttct atccctaaga tcatattctc ctttggtgaa aaaatcagta
     6121 aggatattgt tagcattaga aacaattttt atcttagaaa ttttagctcc cattaattta
     6181 gcataatacg ctcctaaagc attgccaaaa ttcccacttg gtataagaat ttcaatctct
     6241 tctttaaatt catgataaag ttttaagctt gcatagtagt gatagatgat ttgaaataaa
     6301 attctaccaa aatttacaga attagcagcg caaagtccgt atcctacttt acttaactcg
     6361 tccttaaaag tttcttttgc aagcaaattt tttaaagtgc gttgtgcatc atcaaaatct
     6421 cccctgatag caaaaacctt taaatttccc ttatctaaag ctctcatttg aagctcttgt
     6481 atagcacttg ttccaccttt tggatacatg caaagcactt taatattttc taaattttca
     6541 aagcttttaa gcgttgcagg tcctgtatct ccactcgtag cacaaatgat taaaattttt
     6601 tcattttgag aaaattcatt taaaagcact ccaaaaggtt gcaaagccat atctttaaaa
     6661 gctcttgtag gcccatgcca aagctcgttg atgtatattt tatcttttat cttttttaaa
     6721 gcgataggtg agtttttatc atcaaatttt tcataacttt ttaaagcttt atcaaacaaa
     6781 gcctcatgtc caaattcaaa actctctatc aactttaaag caaattcttt ataagataag
     6841 ttcgcgtatt tttccccatc aaattgaggt aaacttaaag gcgaataaag cccaccttgt
     6901 ggagcattgg gattaactaa tgcattttta aaatctactt tattgtttat atttctactt
     6961 tcaactagca acattaaaac tccttatata ttgatataat ttttctttga aattttcttt
     7021 taattctata ttcaattcta taatctgaca cttaaatcca aaatccttca ccttaacata
     7081 atccttaaaa gttagcatta aagtatcaca atgatgctta tccaacaaag cttgcaattc
     7141 ttctttttta aattcataat gatctttaaa aaaataacaa accctagcct ttataaaatg
     7201 ctcataaagc ctaaaaggct ttgcaatcgc tgtaactaaa actgccttag gattttcttt
     7261 tacataagaa tagcgtataa aatccctacc ctcacaagct ataaaatcag cttttttttc
     7321 ataaaattta ggcaaacgat aagcaccgct tggtaaggta aaattaaaat aaggcttgat
     7381 cttgctttca agcaaaatat caaatttttg gatatgaaat ttagaaaaag catcatctaa
     7441 aagcactatt ttagccccta actcaaaagc tttttgaatt cctgctaccc tatcttcact
     7501 tacgatcaca ccctttacac actcttcaaa tgcgtactcc atcgcctcat cgccactttg
     7561 tgaaacttga gctaaaattg cattttcatt tttaaccaca agcaaaccct tgcttttacg
     7621 cctatagcct ctaagcacta taaaaacgcc ttcaaattcc cttgctatag ccttgcaaat
     7681 aggcgttttt ccatttcctc caaagcttaa atttcctacg cttataatgg gttttttaaa
     7741 atcaatcttt tggcgaaaac aagtatttaa aatcgcacat aaaccataaa gcaaactcaa
     7801 aggtaaaaaa ataaaagcta aacatttttg aaaaaagctg ggcttaaaaa aataattatc
     7861 aagccaaagt tgatactttt tttcttcatt cattatttat tcaaactcgc aatttcaggc
     7921 atatttcttt taaaagcatt gttttttatt cttgattgaa gcatatctaa taatttttta
     7981 tctaaatttt ctaatgcttt catatcttga ttttcaagcg cttttaatcc tttgtctata
     8041 agctcataag aaaaacccaa gtctttctca tcactttgtc ctatccaaag atccgcactt
     8101 ggagcttttt gaatgaattt ttcatttaaa tttaaatatc ttgctaatcc ataaatttca
     8161 cttttataaa gctctcctat aggattaaaa gcgtaagcta aatctccata aatcgtccca
     8221 taacccaaaa gtaattcgct tttatttgaa gtaccaacca ctaaagcttt ttttaaagca
     8281 gaataatcat aaagcaagct cattctaata cgtgcagcaa aatttcccct gcttaactca
     8341 tctgtatttt cactttgttt taagaaagcc tctaaaatgt cttgaatttc tatgattttg
     8401 tattttaaat tcaattcttg acaaagtttt aaagcatcgt ttaaattttc ttgattagaa
     8461 aattttgtag gcattaaaag cgcaaaaaca ttttcaccca aagccttctt acaaagcgtc
     8521 gccaccaaag cagaatcaat ccccccgcta agtcctaaaa caacgccatt taagcccgag
     8581 tccttaacct tgtgctgaat gaattcacat aaagtctgag aaattttttc acaatccata
     8641 aacttacctt taaacaatca atgtataatt ataattcatt ttaggttcaa atttcaataa
     8701 aaaaggctaa aaatgcaaat tctaaaacaa gcttgcggtc cttatgagac aaattgctat
     8761 attttaaaca cctctaaagg ggattttata atagatcctg gcgttaatgc tctaagtttt
     8821 ataaagcaat acgctaaaaa acctttagcg attttaaaca ctcacgggca ttatgatcat
     8881 gtatgggata atgctagagt aaaaaaagaa tttgacattc ctatttatat ccataaaaat
     8941 gatgaattta tgctacaaga tccttttgga aaaggttttg agccaagtaa agctgatgtt
     9001 ttaatcgaaa atgaagatga gcttgaaatt tctaacactc ggtttaaatt ccattttctc
     9061 cctgggcata cgccaggctg taccatgata gaacttatgg gtgaaaattt gatgtttagc
     9121 ggagattttt tattttatag aagtatagga agatgggatt ttccttattc agatgctaat
     9181 ttaatgaaac aaagcttgga aaaagtgatg acttataaag aagactttag acttttacct
     9241 ggacatgggc aagaaacaag ctttagagct gaacaagtgc atttaccttc ttggcttaga
     9301 tatttttaaa ggtgattttt gtgaatttag attttgtgtt actttgcttc tttgtttttt
     9361 tagatgcttt tgcgcttttg ggcttgctct taggaaataa gaaaaaaaat caattcaatg
     9421 ataaaaaatt ttataaaatt tgtccttgca aacaaatggc agaaaatggc tctttaagta
     9481 cgatttgtat ttattctgct gtgggtggat ttttttatag tgtattgtct ataggttata
     9541 ttggatttgg cgatttattt ttaaatttga ttttcttatt tacgcttttg agtgcttata
     9601 tgggctggaa gctaaaactt gattaaactc tgtttttata attgttttaa aaaatttatt
     9661 tttataagtg caagttttta agcaagcact taaaaaataa ataatatttt ttaagtaaaa
     9721 ttaaattttt atcttactta aaagtcgttc caccatctac gatgaaagta tgtcctgtta
     9781 cccagcttgc tttatttgag caaagaaaaa gacaagcacc agctagatct tcaggctgtc
     9841 ccatacgatt taaaggactt aaatttatag ttgcttgttt aacctcttca taatttgtaa
     9901 aagctcttaa agcatctgtt tcaatcggcc caccgctgac tacatttaca cggatatttt
     9961 tttctccaag ctctgttgct gcatatcttg ccattgcttc aaccgcagct tttgctgtgc
    10021 cgtgtcctga gtaattttct atataaacca aatttccagt agaagaaatt gaaataatac
    10081 ttccaccccc tactttttcc attctcttag ctgcttcttg agctcctaca acaaaagcat
    10141 ttacagtagc ggtaaagata ttgttaattc cttttggttt taacttcata aatttagtat
    10201 aaccacccac aactgcacga cctgaaataa tggcatttga aataaaataa tccactctat
    10261 caaaatccat atcaattttt tcaaaaagct ctttataggt ttcaggttct aaaatattaa
    10321 attcataagc tctagctttg attttataat ttttctccaa atcttgaacc atttcatcag
    10381 caatttgcgc attagaatta taagtaaaag ctacatttgc tcccactttt gcaaattcat
    10441 acacgatagc cttgccaatt ccacgcgttc caccgctaat aactaaggtt tttcctttaa
    10501 attctgtttc cattaaaatc ctttaatatt atattttttc atcacttcct ctattttaac
    10561 aaaattttct ttacttggag agcaaagagg aagtctaaat tccaaacttt caataagtcc
    10621 tgctatatac atggcagttt ttatagggat gggattgctc tcgcaaaata aaattttatt
    10681 gatattataa agctcatcat taatcttttt agcttcttta taattttctt ccaaagccaa
    10741 atgagtaagc ttgctaatca tatcaggcaa caaatttgaa gtaactgaaa tcaccccttt
    10801 gcccccatta gaaagtatag gataattgat cgcatcttca cctgaaatca atatcatcct
    10861 tggttcatgc gcaagcaaat caacgcattt gtctatattt ccgcttgctt ccttaacccc
    10921 atagatattt tcacaatctc taaataattt aataatagtc tcagtgcaaa tttcacagcc
    10981 tgttcttcca gggacattgt ataaaagcac aggaatatcc acactatttg cgatcgcttt
    11041 ataatgctca taaagtcctt gctgtgttgg tttgttataa taaggagcca cacttaaaat
    11101 tccatctgct ccatgctctt tggcaaattg agccaaatcc acagcttcat gggtagcatt
    11161 acttccagca cccgctagaa ctttaacctt agttccttta caaatatcta ctgcaatttc
    11221 aatacaagtt ctatgttctt catgggttaa agtcgcgctc tctcctgttg tcccaacagg
    11281 aactaccgca tcgatgccat tatcaatttg tctttgtatc aatcttgcat aactttgctc
    11341 atctaacttg ccatttttaa aaggtgtaat caaagctgtc attgctccga taatgatatt
    11401 tttatccatt tttaatcctt tcttaaaatc aatgtagtcg aatttgatct atcaaaatat
    11461 tttttagcgc ttttaaccaa atcttgctcg cacaaatggg ctatattgct ttcatattct
    11521 aaaagaggtt ttaaatcccc tctagccaaa taagaaccat aagtatttga aaccgcactt
    11581 gctgtatcga gtgaaaagat aaaatcactc ttgacattat tttttacttt ttgcaaatcc
    11641 ttgctcgaaa aatcgccctt tttaagtcta tctatgatct tccaaagctc ttgttctact
    11701 ttttctgctt ttacgcccac attgcaatta caaataaaaa taaacaaatt ctcatctata
    11761 caatcatttg caaaagaata aaactcattg actaaattta attcatcgat taaaatttca
    11821 ttcatcatag aactttttcc atttcctaaa agttctgcta aggcatttaa agcaggtata
    11881 tccttatgtt taaaattagg aattttaaaa cctatggcaa gaagttcggt ttgagttggt
    11941 tttttaatct ctatcctttt agctccatct tgtttaggct ctttggtatg aatttttgga
    12001 ataggtttag tgtttttgat tttttcaaaa tgttttttgg ctccactaaa aacctcttcg
    12061 ctatcaatat ccccacttac tatcaaaata gcatttttag gctgataata agtactatga
    12121 aattctttaa tatcttctat gctccaattt tctatatcct taaaaaagcc tataggggtc
    12181 caatgataag gatgatacat aaaagcgtga ttaaaaagtc taaagtacaa ataccctaaa
    12241 ggattattat ccgttctcca tctacgctct tctaaaacca cacttctttc gggttgaaat
    12301 tcctcatctt taaggcttaa attttccata agctccgcaa aaagctctaa ggttttgtct
    12361 aaatttttct tagaacattt gatataataa tgagtataat caaaacccgt gctggcgtta
    12421 tcaaccccgc caaagccctt aactatctca tcaaattccc ctgcttttaa atttttagtg
    12481 cttttaaaat ttaaatgttc aagcatatga gctataccgc tttttcccat gatctcattt
    12541 cttgaaccca ctttataaaa aatatctaca ctgataacat cgctgttttt atttacagga
    12601 aaagtataaa catctagttt attttttagt gtaattttac tatagtctat cattttaaat
    12661 ttgctcccac cgcttcgcta atatgcataa aaccatcttg ttttaataat tctataagag
    12721 ttttattaat atctcttacc aatgaaggcc ccttaaaaat caatgctgta taaacttgta
    12781 ttaaattagc tccatttttg attcgctcat aagcaagctc gccgctgtct atccctccac
    12841 ttgcaataag taaagttttt ccaaataaaa ccttagcaag atctttaaag aaaataccgc
    12901 ttttttcagt gatgagcctt ccgcttatgc cgccaaaagt tctgttatta tcaagaagag
    12961 aataatctac acttgtattg gctatgataa aaccatctgc tccttttaag atagcatttt
    13021 cacaaagctt taaagcgcta tctataggca tatcaggagc gatttttatc aaaataggtt
    13081 tgttagtgat ttttctagct tcttcaagaa gatgacttaa aaaatcatca ttttgaagtt
    13141 ctcttaaatt tttagtatta ggtgaagaaa tattgacgat aaaataatca cacaaatctt
    13201 taaaatttct aaataaagta aaataatcct ccaaagcttt atcattgctt gtgatcttat
    13261 tttttcctat atttgctccc aaaggcaaaa caaaaggata aatttttgat aatcttgcgg
    13321 cgattttttc tgctccttga ttattaaaac ccattgcatt ttgtatgctt tcttgtttta
    13381 caaggcgaaa taaacgcggt ttttcatttc cctcttgagg ctttggagta aaggttccaa
    13441 actctaaaaa accaaaacca agagccgcta aagggcgtat catggtggca tttttatcaa
    13501 atcctcctgc taaacccaca ggattattaa aatcaagtcc tagtaatttt tgtttcaagc
    13561 tatcatcatt tacaatataa ttataagcaa aaaagctcaa agagcctggc aaagtggcat
    13621 ttaaggacct taaactgccc tccactaagg catgagcatt ttcaggatca agcttaaaaa
    13681 gtaagggttt tataaaatta taaagcatat tattcctcgt ttttttaaaa ttttaactaa
    13741 atttaactta aaactagact ttatctactt ctttgttttt aaatttctga taaagttcgc
    13801 aactttgcaa aagctcttca ttgcttccta tagcaatcat ttgcccctga tcaatcactg
    13861 cgatcttgtc tgcattttct atagtgctta aacgatgggc aatcattaaa acaagtctat
    13921 ctttttttaa attttctata gtctcgatga tggctttttc actttcatta tcaagagctg
    13981 aagttgcttc atcaaaaata agcaaatcag gatttttata caaggctcta gctatggcaa
    14041 tgcgttgttt ttgacccccg cttaaatttt taccatgctc ttttatctct gcataaattc
    14101 ctcccatttc ttggacaaat tcataagcat tggctagttt taaagctttg ataatctttt
    14161 ctttattagg ctcttcactg taggctacat tttcagcaaa gctgtcgtta aaaagataaa
    14221 tattttgtgt tacaaggcct attctatcat gcaagctttc tatgctaaat tcactgatat
    14281 ctagatcatt taataaaatc tcaccctttt gcttatcata aaaacgcatt aaaagattga
    14341 tgatagatga ttttccaccc ccgcttgttc caacaagtgc aagaatttca cccttgttaa
    14401 attcaaaatt aatatctttt aaaacactct tataaggatt ttcataagca aaatctactt
    14461 gtttaaattc aatccttgct atactttcta agtttttact tccatttaga atttgtggct
    14521 ctaaatcaag caaataaaaa gtcctctcgc ttgctgctat tgcgccttgt agtctaccat
    14581 aaagcgaaga taatcttttt aagggtgtat aaatagcaaa aagtgctgta ataaaagcaa
    14641 aaaaactacc cacgctcatc gtaccatgga tcacttctct tcctccgatg ataattaccg
    14701 cagccactcc aagcgatcca ataatctcca taagtggact agttagagca tcaatgcgag
    14761 tggattttaa attcaaacga caaagctcgt tgttttgttt ggcaaatttt tcgctttctt
    14821 tgttttgagt attgctcgcc ttaataagct caatatttga aaaaatttca ctcagtcttg
    14881 aaagcaaatc agaatttgtt tcttgtatac ttctagcgta tttttttaat tttctagcaa
    14941 aatgcaccaa gggcaaaatc gcacaaggta aaactactag agcaaaaaaa gccaaaatag
    15001 gactttgata aaataccact atcaataaac ccacaatggt taaaagctct ctaaaaaaat
    15061 caggaatgat attagaaact atgctttgaa gagcgttaat atcattagtg caacgactta
    15121 ctagctctcc gcttctgttg cgtttaaaaa aatccatatc aagctttaaa agatttttta
    15181 aaaccttaaa acgcaaaatt cttaaagtat ccattcctat aaaacttaaa taataagttt
    15241 gtaaataaaa acccaaattc tttaaaatat aaataataac aagtagaaaa ggtaaggtat
    15301 agagcaaggc ctcatttttt tcaacaaaaa tataatctaa aataggcttt aaagatgcga
    15361 aacttccagc tgttcctata ctagtaagta tcatcccaaa aatagcaatg gcaaattctt
    15421 tcttgtattt tttataaaaa ggcttaaaac ggattaaaac atctttaaga gtcatatctt
    15481 tatgcattta aattttctcc caaatcgttc cttgcggcgt atcttgcaaa gcaataccaa
    15541 gcttgagcaa gtcttctctg atctgatctg ctttggcaaa atctttattt ttcttagctt
    15601 cgtttctttg caaaatttga tcttgaattt tttctttcaa ctctttggcg acaccccatt
    15661 gaaaatataa attttcatcc ataaaaccaa agccaaaaat tttagccagt tcgcttaaag
    15721 cttctttgat tttttgtttt aattctttat ttttactttg ctgatcaagc tctaaatttg
    15781 cattagttat aaactcatct aaaagcgcca aagccttaga gatatttaaa tcatcactta
    15841 aaacttctaa gatttgcttg gcgatattgc tatgaatctc tatatcattt aaaattccaa
    15901 aatctggggt ttttcccaca gcaagtcttt ttttaagacg ataaaactta tccaagcgtt
    15961 tttttacatt ttctaaatca tctaaagaat aattaaaatg agctctataa tgagaactta
    16021 aaagataaaa tcttaaagcc tctcccataa aatctttgag tgcatctttt aagaaaaagc
    16081 tattgtttaa acttttgctc atcttttctc cattgatttt tacaaagcca ttgtgaagcc
    16141 aaatttttgc caaagttctt ttgcacgcac aacgacattg tgctgcctca ttttcatgat
    16201 gaggaaataa caaatccact ccacctgcat gtatatcaag agtatcgcca aaaatagaat
    16261 caatcatagc cacacattca gtatgccaac ctggtcgccc ttttccaaat tcactatcat
    16321 aaaaattttc atcgaatttc caaagaacaa aatcactctc atttcttttt tcaacttcat
    16381 tactcagtct tgaaacattt tcttctgtgt tacgatgaga taagcttaga taatcctcat
    16441 ctttgctagt atcaaaatac actccatctt ctaaagtata agtaaagcca tttttactaa
    16501 gcttatggat aagatctaac ataggttcta tataatatgt cgcacgaggt ttaaaatcag
    16561 gctctaaaac atttaaagct ttcatatctc tttcgtaatt tgctatataa aactcaacaa
    16621 gctcatttaa gctcttaccg ctttcactca ttttttttaa aattttatcg tctatatctg
    16681 tataatttct agcaaattgc accctatagc ccaaagaaag taaaacccta cgcaacaaat
    16741 caaaacaaac actgcttcta gcatgaccca aatgcgcatc atcatacaca gtaggtccac
    16801 ataaataaat attgacatta tcttgatcaa gttcgatttt ttcttttaaa acgctatcca
    16861 ttaatttcat caaaacactc ctttaacact agcaacgatc cacaacaaag cctctataag
    16921 ataaggcttg atctcataaa gcaaaattgt aaaaacaaca agtcctgtaa tcattaaaaa
    16981 acaaaattta aaagatatta aagcaaaaaa gttcttaaaa ccgaattctt tgatattggc
    17041 aataagcaaa taaaaagcac ttaaagagct tgaaagcgcc acagctataa cctttaaact
    17101 ctcatctttg attaaaaaaa taaaaagcac agagcataaa gcactaataa gcaaggcttt
    17161 aaaggcgata aaagcggctg ttttttgttt gaatttagca taaagccata aagaaaataa
    17221 tttttgtaag ccaaaaggca aaagccctat caaataagcg attaaaatat aagctgtgat
    17281 aatactatct tcgtgagtaa aattccctct ttcaaataaa agctttgaaa tttctaaagc
    17341 aaatacagaa cctacgatac ttgaaacaat caacaaaata cttaaaaccg ctaaagctct
    17401 ttgcataaaa cttaaggcta aattttcttg atcgcttttt aaatgcttta aaattttagg
    17461 aaaagaaact tgagttaagg ctatagcaaa aagagctaaa ggaagctgaa aaacgcggtt
    17521 tgcataataa agataagaaa tactacccgt cattaaaaaa ctcgctattg tcgtatcaag
    17581 caaagagctt atttgtgtag cagaagagcc taaaactcca tgaaaaaaat tgctataaaa
    17641 accctctagt ttagcctttg ctcgtctaaa tttcacactt aatgccatag cgcgtatcac
    17701 aggatttttt cgcaacacca ttaaatgcaa aatcaattgt gccacaccgc ttaatacagt
    17761 cgcataagaa aaataataaa gcgtatcttg aggagcatct ttatcaacaa aaaatgcggc
    17821 tataactata cttagattaa acaaagctgc cgaaaaagaa gtgatgaaaa atttttgtct
    17881 ataatttaaa atcgctccta aaaaggtaac caaaaaaata aaaaacaaat accaaaaatt
    17941 aatcgccacc aaaggagagg ctaaagctat agtatcggaa ctaaacccaa aagcaaaaag
    18001 cttggtaaaa aatgaagaaa aaaagcttac taaaagacaa aataaaaaca ctataacact
    18061 aaattgatac atcacactca cgcaaaaagc gccttttttc tttgctttga caaagttagg
    18121 taaaaagctt tgcccaaacg ccccttcagc gaaaattctt ctaaaaaagg caggcatttt
    18181 taatgctaca aaaaaaatat cactataaat tccagccccc aaaaaaagag cgattaaaac
    18241 atcacgcgct agacccaaaa cgcgagaaaa taaaattcct aaagcattga taataaaatt
    18301 tttaaacact aaactcttca taaattttca caaaatttca aatataaaag ctatcatttt
    18361 aactaaattt gattaaaaat tgactataat attgaattta aattaaacaa taaaggggaa
    18421 agttttggct ttagatgaga aaatcatttc ctataccgaa aatccttctc gcgaactttt
    18481 atctgtagct tcaagaacta atatcgcttt aaatgaactt gattttcatc ttttagcttt
    18541 ttcgacacaa tatcgtcttg aaaataccga atggataaaa atcgctgaaa aagatctcac
    18601 tctttttgaa aaagatgaag tatttttaaa agaggatttg caaatcaaac aagagtacaa
    18661 aatcgaaatt tttcatcaaa cacgccaaga taaaaccgca aatactatca agctgattgc
    18721 taataaaaat ttaacaaaaa ttgtcg
//
LOCUS       DAQUWA010000035        18361 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.035, whole genome shotgun sequence.
ACCESSION   DAQUWA010000035 DAQUWA010000000
VERSION     DAQUWA010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18361
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.035"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(23..1342)
                     /locus_tag="R8X70_001047"
     CDS             complement(23..1342)
                     /locus_tag="R8X70_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEF2928831.1"
                     /translation="MKLKLNFLPYFSFIPKKLNTNSTIFKIIKVFFIAFLLSNCIYLS
                     FFENIFTQAISSFLAIWGLVLLLKSKSPKQYFWIGFFVGILWFWWIGLSSIYFDLNYL
                     VPIVIILIGIVYGILFRICYLFKFDFLRLCGIFCLSFIHPLGFDWLNWGVYTVYGFFD
                     PSYRGIICIFLLAYIIHENYISRYYKIAILLIIFFIGFQYDEKKSEELNLSYKLISTD
                     ISQDQKFLQENVSVNSDNLIKEIIQAINEKKELVILPETAFAFNLKNTLYEKMLKELS
                     YQIIIITGAFNIQEGKTYNSTYIFKGGNSYILNKHFLVPFGEEIPFFKKTIQKYFLPN
                     IAEFDQGPLQSKYKLNDQIITNAICYEATKEQNYKNSKIIIAISNNAWFNYSSEYKLQ
                     KLLMQFYASKYGVSVYHATNGKESGVIKPKEKFVQKIKNYFNKQDKS"
     gene            1315..1587
                     /gene="yajC"
                     /locus_tag="R8X70_001048"
     CDS             1315..1587
                     /gene="yajC"
                     /locus_tag="R8X70_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEF2928832.1"
                     /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEDDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            1580..3160
                     /gene="secD"
                     /locus_tag="R8X70_001049"
     CDS             1580..3160
                     /gene="secD"
                     /locus_tag="R8X70_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEF2928833.1"
                     /translation="MRNSKITYRLVVFIAVFIFGVVFSLPSFLQSERGVKINLGLDLQ
                     GGLYMLLGVDNQEAVKSKIKSVASSLSYSFNKENILNDGLNIHDDSLDFTLLDNADIV
                     KTENLLKEINGLNVQREDMHYTISFTSEEVKSIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGEDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMSQASNMSDAEAAS
                     YGLVLVPDSRNPNLKYPLKSIPILDGSMLTDARVGLSDTSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKVYSAPSINERIGGGSGQISGTFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASIFIVVFMVLYYGMAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLREGANIKASIEQGYK
                     NAMSAIIDSNITSLVTSIALYAYGTGAVKGFAVTLGIGIVVSMITAIWGTHGMFDYFM
                     RRIEKSNNTRFWFGYRRK"
     gene            3160..4131
                     /gene="secF"
                     /locus_tag="R8X70_001050"
     CDS             3160..4131
                     /gene="secF"
                     /locus_tag="R8X70_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEF2928834.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSIVLFFGSIYLLWDRGLQFGID
                     FSGGTLIQLKYDTAAPIPQIREILEKQGSFQNLSVTEFGSKEEITIRFLGSNDSLGSD
                     IGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGIMAIIVSLVAILIYIAIRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKSELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIVVGT
                     LSSIFVASPTLLWFKFSVIDFRNKELEKLKRKQEKERNRAMYEKGTV"
     gene            4141..6573
                     /locus_tag="R8X70_001051"
     CDS             4141..6573
                     /locus_tag="R8X70_001051"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEF2928835.1"
                     /translation="MAYDANLIEKRWQEIWDKNEYFEPKDDLTLPKKYILSMFPYPSG
                     RIHMGHVRNYSIGDAIARYYRKIGYNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     IAYMKNELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMYEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLSELENLKDKWPSQVLTM
                     QENWIGKSEGLEFSLNLDKESLEKTKTQSFEVFTTRADTIYGISYVALAPEHKIVQNL
                     IQANCLDDEKVEQIKNMQKQSARERQIADKEGCFLGIYAIHPLTQEKLPVWVANFVLA
                     DYGSGAVMAVPAHDERDFEFANKYKLKIKQVIECEDAQLPHVQKTGKLIQSGEFNGFD
                     CNEVRARIISKFEDEKLGKRVINFKIRDWGVSRQRYWGAPIPMVKCKNCGIVPQKIEN
                     LPITLPEDIQITGEGNPLEKHPIWKNCTCPKCGQEAQKESDTLDTFFESSWYFARFAS
                     DEKTWQEKALDKESVKYWMNVDQYIGGIEHAILHLLYARFFQKVLKDLGYLEDNEPFA
                     RLLTQGMVLKDGAKMSKSKGNVVDPDDIINKYGADTARLFILFAAPPAKELEWNDDAV
                     EGAYRFICRLYDRAQNVRAGELLEFKHDDLNKEEKYARLKVYEALKKSFEVYTQSFAF
                     NTLIAACMEALNALAPCKNEALEQEAFYIILNILEPIIPHVCFELSDKLFKCENFKVL
                     NLKEEVFVKDSLNLGISVNGKKRGEIEVSSSASQDEILELAKQKVSKWLEGKNIVKEI
                     YVEGKLVNLVIK"
     gene            6570..7082
                     /locus_tag="R8X70_001052"
     CDS             6570..7082
                     /locus_tag="R8X70_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928836.1"
                     /translation="MKGILFFIVALFLGACGYVPTSKVADNIFDDKVYVNVELSLQDP
                     RNSIFVADTLKEMVISKLGRRLALKHEADDVINVRMNNLEFIPLIYDQNGYVVSYKAK
                     LNLEFKVVFKDGSVEHFNTSGSYNFDISPNSIISDTARYEAIRSASSEAFDEFISVIA
                     IKGQKRAAQY"
     gene            7066..8469
                     /locus_tag="R8X70_001053"
     CDS             7066..8469
                     /locus_tag="R8X70_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928837.1"
                     /translation="MLPNINEIAKETLITLKDRKLRPTPENYTEIFEELSKKYGLISS
                     NKAKLEKYKALLLPNYQQELNSKSIRTLEELISFLISALNRQNGKQFSEFFDFLATLS
                     KSLQVSKDKKIRDLAKITSIRISKTMDSESIYLLSKKWKEFEKNYNENDLEGGLRRYG
                     IAKYDDFDTVVKKLLNKLEERSLEVFAELLASCLNPSLVEDLKIHGFAQNLLQKPFLL
                     SESGFKNELLEFVNRRVMVDNMYVQKNLNFFNDNLKKIYELFMLLNKSNEQNMDFINT
                     LKPDKQGEIKLSFELLKQKFIQLNERINSLNAQIEFTQNLEERESWSVLKELERLDEN
                     YNKYKVNYSLALFSIKNYRFIMERYGVGSLNEIFVRFKKILKDNCSEFDELWMIDEKS
                     YLIISPGRNKEKVAQLVRENLKTIENFRFIYKQDIITPKIITAYLDKQSKPHANILEE
                     LMNQISNLDERNNAKDQ"
     gene            8441..9628
                     /locus_tag="R8X70_001054"
     CDS             8441..9628
                     /locus_tag="R8X70_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEF2928838.1"
                     /translation="MKETMQKISKVDEFLVQKSTNYDKIDRFVMFRMYEKYKTNFSIK
                     PIVHIIGTNGKGSTGRFLTQLLEGLGFKVGHYTSPHIFEFRERFYKNGDIISENDLEL
                     AHKNLLDIFKDNLKKLSYFEYATFLAVELFKDCDYAIFEAGVGGEYDATSVFDKSLSI
                     FTKVGFDHTQILGDSLEKIARTKFKVMAKQALISSEQDERVLQMAQKIAFLKNTKLYF
                     SWQLKDENLMQLNEYVQKYDLPEFLRHNLILALNALEILLSKEKLSQALLKLGKLNLK
                     GRCEQIAPHLYVDVGHNVMAASALCKKFSGEKLVLIYNSYLDKDIFEILKTLKPIIDT
                     IKIYKYVSLERRLANDKIYQVANALNLKCEEFVSLDEKKKTLVFGSFALVESFLKEWS
                     DKK"
     gene            9615..10517
                     /locus_tag="R8X70_001055"
     CDS             9615..10517
                     /locus_tag="R8X70_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEF2928839.1"
                     /translation="MIKNKFTITITDINGSRHFYLNQIIKKIVLYVVAFIFLFLIFSG
                     FYIKYLDSKLSDISTKREELLAKSKELEFANAQMQKNVEEKAKQYAAIEDKIASFEEA
                     LGLEAENNLTITDRLDNLKLTNEQQIGILGQIPNGWPIENKGVTGNFGWREHPLLKRR
                     EFHPGIDLRAAIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMVRKDV
                     VKAGQFVNKGQLIGYAGNTGLSTGPHLHYEVRFINKTLEPLYFLNLERKNMNEFFNQE
                     RRVPWQSLIKAVTAQHLAPVPKQQ"
     gene            10454..10849
                     /locus_tag="R8X70_001056"
     CDS             10454..10849
                     /locus_tag="R8X70_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEF2928840.1"
                     /translation="MAIFNKSGNGTALSSSSETTVISSGARIEGKFYFASMLHVDGEL
                     NGIVHSESIVVIGKNGNLKGELKADKIVVNGCFEGDLEADSLEILAGGVVSGNISIKD
                     LAIENGGRFNGTSKIKQEEPVRLLENSSE"
     gene            10849..13785
                     /locus_tag="R8X70_001057"
     CDS             10849..13785
                     /locus_tag="R8X70_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004290191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEF2928841.1"
                     /translation="MQANFFEYLQDSNIAQLVLCEDDKESFLLSQVALFKDLKTFVLP
                     DFRAEFGDDLRAFSKELFELCKVLNAYHKEKDTKILISPLSTILKKLPGQKHLKNYKL
                     SKKNVFNLSEFKNELNKLGYEFVDMVQDKGEVSIRGEIIDIFCINEELPTRVLLFGDE
                     LESIRKFDPMNQKSFPKEYEELEICPFLTYFSEENYENFKDKLENFNSDVLINDINSL
                     GFWCINDFCDYLELDFISIKKFNQEEWDKDLSKINAKIIPQASVYKDLKSSYNKDFFS
                     LKQNKKITILAKNEALFKALELENTQNISFQKSDLILNLISNQELIISLNHKEKQKYK
                     RKANLIIDELKIGDFIVHEDYGVGKFLGLEMISISGAKKEFVAIEYQNSDKLLLPVEN
                     LYMIDKYLGASGGIPLLDRLGKMTFIRLKERLKTKLLAIASEIVIMAAKRALIKPKEI
                     KIDYADQAYFVSKAGFSYTQDQNKACEEILNDFENGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVKSGFCAFFFAPTTLLSHQHYKSLKKRFEPFGIEVFKLDRFTSTKEKKTLMLNL
                     EQNKACVVIGTHALLNVECENLALVIIDEEHKFGVKQKEKLKELTQNSHLLSMSATPI
                     PRSLNQALSSIKSYSVLQTPPEDRLDVRTFVKENDDALLKEAITRELRRGGQIFYIHN
                     HIASIEQCKKHLLDLFKNLRILILHSKIDAKIQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTMIVERSDRFGMADLHQLRGRVGRSDRQGYCYFLVENKEELTQDALKRLVSL
                     ESNSYLGAGSVLAYHDLEIRGGGNLLGIDQSGHIEQIGLSLYLKMLEDELNALTKKES
                     FEEKKIDLKLTINAFLNSELINEDRLRLELYRRLSKCKNIDEVYEIEGEIEDRFGKLD
                     LYTKQFLMLIIIKILALGKFKTISNFEQNIQFVKINDEKEFIKARSKDDDDIIEAVLT
                     HLRKDK"
     gene            13789..14550
                     /locus_tag="R8X70_001058"
     CDS             13789..14550
                     /locus_tag="R8X70_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2928842.1"
                     /translation="MDWDKTYAAIYRSRKDYLKPIIDLDNISLNDLLGMEEQKNVLYQ
                     NTLNFIHNKGANHALLWGAKGTGKSSLIKAIFNEFKDKGLRLVELAKDDLFALVDIID
                     ELREQPFKFILFCDDFSFEKNDDSYKFLKPLLEGSIEAPPQNIIIYASSNRRHLLSES
                     MSDNQGVQVTHTELHASDAAEERLSLSDRFGLWLSFYQGNLNEYLKLVDFYFKDIKCD
                     KELLHKKAKEFANLRASRSGRTAKQFYLAFKESIE"
     gene            14547..15230
                     /locus_tag="R8X70_001059"
     CDS             14547..15230
                     /locus_tag="R8X70_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HEF2928843.1"
                     /translation="MNGADIFKKLLACNLDFKEFDWLENQGLSDFELLISVILTQNTK
                     WDNVLKALNNLKNARISSLEQLSNLSNLELATLIKPSGFYNTKAKRLKELANKILDTY
                     SNIENFKKNVDREWLLNTKGLGFESVDSILNYLCKREILVVDSYTQRLATHLGYEFEN
                     YEELREFFESGIENEQENLCQILEKKYELFELYQIFHAAIIAFGKVAFEGVKLTLEGE
                     NLIQNLKEE"
     gene            15230..16042
                     /gene="thiD"
                     /locus_tag="R8X70_001060"
     CDS             15230..16042
                     /gene="thiD"
                     /locus_tag="R8X70_001060"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEF2928844.1"
                     /translation="MKAKGSDLIPVLSIAGSDCSGGAGIQADLKTFSAHNLFGMSVVL
                     SVVAENTARVISVHDIPVQSVDEQMLAVFEDIVPKATKIGMIGTCELMECVARNLEKF
                     KPQNIVIDPVMFAKNGFALMPQENCDFFKKTIVKFADILTPNIPEAEFLCDFKIKNEE
                     DMIKAAKYLCTQGAKAVLLKGGHSEENANDVLFDGNEIFILKGERIETKNTHGTGCTL
                     SSAIASNLALGKDLYNAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFRFLNEK"
     gene            16032..16664
                     /gene="thiE"
                     /locus_tag="R8X70_001061"
     CDS             16032..16664
                     /gene="thiE"
                     /locus_tag="R8X70_001061"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEF2928845.1"
                     /translation="MKNDLDLSLYLVASRGKKSDEFFLNTLEEAIKGGVSIIQLREKE
                     LSSREFYKLGLKVQKLCKEYEIPFLINDRIDIALALDADGVHLGQEDLEVRFARKILG
                     KEKIIGLSLKNLEQLKDIDGADYLGCGAIKATPTKESSVISFETLSQICEKSPIGVVA
                     IGGIDKELIKELKGIKISGIAVVRAIMDAQNAYLAAKELRQEMNENLSFK"
     gene            16642..17283
                     /locus_tag="R8X70_001062"
     CDS             16642..17283
                     /locus_tag="R8X70_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEF2928846.1"
                     /translation="MKIYLLNETVFEGVENLVLNEIVFYDFGVNLDEFDALLCTSKNA
                     LKALKKTKNSLNLDINVYAVGQNTAQFAKDMGFKKVQFAPKSYGSELFNHFKEELKNQ
                     KCLYLRAENIASTLNLDLRTYGVDLQEIIVYKNVFKKSKQTILHPAIFIFTSPLSVEN
                     FFKQYDLKKEDKVIAIGQSTAKKLTQKLTHLDNLFISSKQDLKECVKLAKSLI"
     gene            complement(17276..17728)
                     /locus_tag="R8X70_001063"
     CDS             complement(17276..17728)
                     /locus_tag="R8X70_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928847.1"
                     /translation="MKRAYILLSLVFLISALEIWLSLNITTSSYIPRFVKDAYYYLQA
                     QILADEKLVKYLLYQAKLDGKECLDSITLHYPNLNDKIKIQYHYPIAQCKNFKFQAIN
                     KDANLSQDGIIIAHMSIALNTQKNVNDEILINKTFILHTKESFWNQTK"
     gene            complement(17725..>18361)
                     /locus_tag="R8X70_001064"
     CDS             complement(17725..>18361)
                     /locus_tag="R8X70_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928848.1"
                     /translation="LVLILIGFLALFLSRTLWEFYYLNNQQLKMKDLILKTHLSVLRL
                     EKLLQTCTNITFEPNHISCLLKDDLLYLDDNKEKLLNSSLILENNTSLYSPNSNFKLQ
                     LQNRKELYNDEQNIIYALVNKEIKKIFIHSENNITASFKGKFIPIQARIKLFLKEDKI
                     HYELYPYFNNQLEQYSIFMDNVSLFEIQKQKLKVCLKEQEQEYCLTKRLFI"
BASE COUNT         6490 a         2227 c         3488 g         6156 t
ORIGIN      
        1 tttgcacaaa gataaaaatt ttttaacttt tatcttgctt gttaaaataa tttttaatct
       61 tttgcacaaa tttttcttta ggtttgatta caccactttc cttgccattt gtggcatggt
      121 atacactaac tccatatttg cttgcataaa attgcatgag tagtttttgt agtttgtatt
      181 cgctagaata attaaaccaa gcattattac ttatagctat aataattttt gaatttttat
      241 aattttgttc ttttgtagct tcgtaacaaa tagcattggt aatgatttga tcattgagtt
      301 tgtatttgct ttgtaatggt ccttgatcaa attctgctat attgggtaag aagtattttt
      361 gtattgtttt tttgaaaaat ggaatttctt ccccaaaagg tactaaaaaa tgtttattga
      421 gtatatagct attgcctcct ttaaaaatat atgtactatt gtaagtttta ccctcttgta
      481 tgttaaatgc tccagttatg atgataattt ggtatgatag ctcttttagc attttttcgt
      541 ataaggtgtt tttgagatta aatgcaaaag cggtttctgg caagatgacg agctcttttt
      601 tttcattgat ggcttgaata atttctttga ttagattgtc tgaatttaca gatacatttt
      661 cttgaaggaa tttttgatct tgagatatat ctgtggagat aagcttatag gatagattta
      721 gctcttctga ttttttttca tcgtattgaa agcctataaa aaatataatt aagagaatag
      781 caattttata atatcttgaa atataatttt catgaataat atatgctagt aaaaaaatac
      841 aaataatacc acgataactt gggtcaaaaa aaccatatac agtataaact ccccaattaa
      901 gccaatcaaa gcctaaagga tgaataaagc ttaaacaaaa aattccgcaa aggcgtaaaa
      961 aatcgaattt aaataaataa caaattctaa agagtattcc ataaactata cctataagga
     1021 taataactat aggtactaaa taatttaagt caaaataaat cgaagaaagt cctatccacc
     1081 aaaaccaaag tatccctaca aaaaatccta tccaaaaata ttgcttagga cttttgcttt
     1141 ttaaaagcaa gactaagccc caaattgcaa gaaatgaact gatcgcttgg gtaaaaatat
     1201 tttcaaaaaa agataaataa atacaatttg aaagcaaaaa tgctataaaa aagactttta
     1261 ttattttaaa aatggtagaa ttagtgttta atttttttgg aataaaggaa aaatatggca
     1321 gaaaattcaa ttttaacttc attgttacct cttgttgtgc tatttgcaat tttttatttt
     1381 ttggttataa gaccacaaca aaaacaagca aaagcacata aacaaatgct tgagtctttg
     1441 caaaaaggag ataaaatcat cactaatggc ggacttattt gtgaagtcgt aaaaccagag
     1501 gacgatttta tcaaagttaa gcttaatgaa gacaatgtta ctgcaaaaat ttcaagagaa
     1561 tttatagcaa agaaaattga tgcgtaattc taaaatcact tatcgattgg ttgtttttat
     1621 tgcggtattt atttttggag ttgttttttc actcccttct tttttgcaat ccgagcgagg
     1681 agtgaaaatc aatttagggc ttgatttaca aggcggactt tatatgcttt tgggtgtaga
     1741 taatcaagag gctgtaaaat ctaaaatcaa atccgtcgct tcttctttga gttattcttt
     1801 taacaaagag aatattttaa acgatggatt aaatatccat gatgatagtt tggattttac
     1861 tttattagat aatgcagata tagttaagac tgagaatttg cttaaggaaa ttaatggact
     1921 taatgtgcaa agagaagata tgcattatac aatttctttt acctcagaag aggttaaaag
     1981 tatagagaat tttgctcttt tgcaagcagt tgagactatt agaaatcgtt tggatcaatt
     2041 tggcttagca gaaccaacgg ttgcaaaaca aggcgaagat aaaatcttag tcgaattggc
     2101 aggaattaaa accaaagagg atgaactaag ggctaaagag cgcattacta aagcagctca
     2161 tttgcaactc atggaagtgg atgattctaa aatgagtcaa gcttctaata tgagtgatgc
     2221 tgaagcggca agctatgggc ttgttttagt tcctgattct agaaatccaa atttaaaata
     2281 tcctttaaaa agcattccta ttttagatgg ttctatgctt acagatgcta gagtagggct
     2341 tagtgatacg agtaattatc ctgttattaa ttttacttta aatgctgaag gttctaagaa
     2401 atttgctgat tatacaggag caaatgttgg aaagcgtttg gctatcgtgc ttgataataa
     2461 agtatattct gctccatcga ttaatgaacg cataggcggt ggaagtggtc aaatcagcgg
     2521 gacttttact caagaagaag cacgagatgt ggctgtggct ttaagaagtg gggctttact
     2581 ggcgccagtt aaacttttag agcaaagaag tataggtcca tctttgggtg ctgatagtat
     2641 taaaatgagt atgatagctc ttataggtgc ttcgattttt atcgtggtat ttatggtgct
     2701 ttattatggt atggcaggaa tttttgcaaa tattgcaatg ctcgttaatg ttttggttgt
     2761 tgtggctgta atggcaatgt ttggtgcaac tttgacttta ccaggtatgg caggacttgt
     2821 tttaactgta ggtatggctg ttgatgccaa tgttatcatt aatgagcgta tcagagagct
     2881 tttgcgcgag ggtgcaaata tcaaagcaag tatagagcaa ggttataaaa atgctatgag
     2941 cgcgataata gattctaata tcacctctct tgtaacctct atagcacttt atgcttatgg
     3001 aacaggtgct gttaaaggat ttgcagtgac tttaggaatt ggtattgttg tttctatgat
     3061 tactgctatt tggggaacgc atggaatgtt tgattatttt atgcgccgta ttgaaaaaag
     3121 taataataca agattttggt ttggttatag gagaaaataa tgcagttttt tagcgaaaag
     3181 aaaatttatg attttatgag aatgcgtttt gctgcaattt ctctttctat cgttttattt
     3241 tttgggtcta tttatttgct ttgggatagg ggtttgcaat ttggtattga ctttagtgga
     3301 ggtactttaa tccagcttaa atacgataca gcagctccca ttcctcaaat tcgtgaaatc
     3361 ttagaaaaac aaggcagttt tcaaaattta tccgtaactg aatttggaag caaagaagag
     3421 attactatcc gttttttagg aagcaatgat agcttaggta gtgatatagg agagcatatt
     3481 agcacccttt taaaagatac gggcaaattt gaagtgcgtc gcgcggatgt tgtgggtcca
     3541 aaagtgggcg atgagcttag aaataaaggt attatggcta tcattgtatc cttagtagcg
     3601 attttaattt atatcgcaat acgctttgaa tggcgttttg cattagcggc aattattagc
     3661 gaaattcacg atgttgtgat tactttaggg gcgatttcat tgtttaaaat cgatgtaaat
     3721 ttagatacct tggctgcggt tttaacagtg cttggatatt ctttaaatga tacaatcatc
     3781 atttttgata gaattagaga gggaattaag acgagtaaaa aaagcgagct tgctcctatt
     3841 attaacgaaa gtgtttcagc aaccctatct agaacggtat taacttcagg tcttactttg
     3901 gccactgttg tcatacttta tttttttggc ggagagatga tacaaggatt ttctttggct
     3961 ttgatagtgg gtattgttgt aggaacttta agttctattt ttgtagctag tccgacttta
     4021 ctttggttta aattcagtgt tattgatttt agaaataaag agcttgaaaa acttaaaaga
     4081 aagcaagaaa aagaacgcaa tcgtgcaatg tatgaaaaag gaacggttta aaggaatatt
     4141 atggcttatg atgcaaattt aatagaaaaa agatggcaag aaatttggga caaaaatgag
     4201 tattttgaac ccaaagatga tttaacccta cctaaaaaat atattttatc tatgtttcct
     4261 tatccaagtg gtcgtataca tatgggacat gtgagaaatt atagtatagg tgacgctatt
     4321 gctagatatt atcgcaagat aggttataat gttttacatc ctatcggttt tgatagtttt
     4381 ggtatgcccg ctgaaaatgc agctattaag cacaaaattc atccaaaatc ttggacttat
     4441 gagaatatag cctatatgaa aaatgaactt ttttctttag ggttttcttt ttcaaaaaaa
     4501 agaatgcttg caacctctga tccgctttat acaaaatttg aacaagaatt ttttatcaaa
     4561 atgtatgaaa aaggtttgat ttataccaaa gaagcgaatg taaattggtg cgagcaagat
     4621 caaaccgttt tggcaaatga gcaagtagaa gatggaaagt gttggcgttg tggacatgaa
     4681 gtggttcaaa aaaagatgcc agggtattat gtaaaaatta cagcctatgc agaggaactt
     4741 ttaagcgaac ttgaaaattt aaaagataag tggccttctc aggttttaac catgcaagaa
     4801 aattggatag gtaaaagtga aggtttggaa ttttctttaa atttagacaa agaaagcttg
     4861 gaaaaaacaa agacacaatc ttttgaagtt tttactactc gcgcagatac tatttatggt
     4921 atttcttatg tagctttagc acctgaacat aaaattgtgc aaaatttaat acaagcaaat
     4981 tgtttagatg atgaaaaagt agaacaaatt aaaaatatgc aaaaacaaag cgctagggaa
     5041 agacaaatag ctgataaaga agggtgtttt ttaggaattt acgctatcca tcctttgact
     5101 caagaaaaac tccctgtttg ggtggcaaat tttgttttag ctgattatgg tagtggggct
     5161 gtaatggctg ttccagctca cgatgagaga gattttgaat ttgctaataa atacaaactt
     5221 aaaatcaagc aagtgattga gtgtgaagat gcacagcttc ctcatgttca aaaaacagga
     5281 aagcttatcc aaagtggtga atttaatggg tttgattgca atgaagtaag agcgagaatt
     5341 atttcaaaat ttgaagatga aaagttagga aaaagggtta ttaattttaa aattcgcgac
     5401 tggggagttt ctcgccaaag atactggggt gctcctatac ctatggtaaa atgcaaaaat
     5461 tgtgggattg tgcctcaaaa aattgagaat ttacctatta ccttgcctga agatattcaa
     5521 atcacaggag agggcaatcc gcttgaaaaa catcctattt ggaaaaattg tacttgtcca
     5581 aaatgtggac aagaagcaca aaaagaaagc gatactttgg atactttttt tgaaagttca
     5641 tggtattttg cacgctttgc aagtgatgaa aaaacatggc aagaaaaggc tttggataaa
     5701 gaaagtgtga agtattggat gaatgttgat caatatatag gtggcataga gcatgccatt
     5761 ttacatttgc tttatgcaag attttttcaa aaagttttaa aagatttagg ctatttagag
     5821 gataatgagc cttttgctag acttttaact caaggtatgg ttttaaaaga tggtgccaaa
     5881 atgtctaaat ccaaaggaaa tgtagtcgat cctgatgata ttatcaataa atacggagcc
     5941 gatactgcaa gactttttat cctttttgct gcacctcctg ctaaagaact tgaatggaat
     6001 gatgatgcgg ttgagggggc ttataggttt atttgtaggc tttatgatag ggctcaaaat
     6061 gtaagagctg gggagctttt agaatttaag catgatgatt taaataagga agaaaaatac
     6121 gctagattga aagtgtatga agctttgaaa aaatcttttg aagtttatac tcaaagcttt
     6181 gcttttaata ccctaatcgc tgcttgtatg gaagcgctta atgctttagc tccttgtaaa
     6241 aatgaagctt tagaacagga agctttttat attatcttaa atattttaga acctattatt
     6301 cctcatgtgt gctttgaatt aagtgataag ctttttaaat gtgagaattt taaggtttta
     6361 aatttaaaag aagaagtttt tgtaaaagat agtttaaatt taggcatcag cgtaaatggc
     6421 aaaaagcgtg gagaaattga agtttcaagc tcggcaagtc aagatgaaat tttagagcta
     6481 gcaaagcaaa aagtttcaaa atggctagag ggtaaaaaca tagttaaaga gatttatgta
     6541 gagggaaaac tggtaaattt ggtgataaaa tgaaaggaat tttatttttt atcgtagctt
     6601 tgtttttagg ggcgtgtggt tatgttccaa cttcaaaagt agcggataat atttttgatg
     6661 ataaagtata tgtgaatgtg gaattaagcc ttcaagatcc tagaaacagt attttcgtag
     6721 ccgatacgct taaagagatg gttatttcaa aattgggacg aagattggct ttaaaacatg
     6781 aggcagatga tgtgatcaat gttaggatga ataatcttga atttatccct ttaatctatg
     6841 atcaaaatgg ttatgttgta agctacaaag ccaaacttaa tctagaattt aaagtggtat
     6901 ttaaggatgg tagcgtcgaa cattttaata caagtggaag ctataatttt gatatatcac
     6961 ctaacagtat tatcagtgat acagcgcgct acgaagctat acgctcagct tctagcgaag
     7021 cttttgatga atttatttca gtaatagcta tcaagggaca aaagcgtgct gcccaatatt
     7081 aatgaaatag caaaagaaac tttaatcaca cttaaggata gaaagcttcg tcctacccct
     7141 gaaaattata cagaaatttt tgaagagctt tctaaaaaat atggtttaat aagctcaaat
     7201 aaagccaagc ttgaaaaata taaagctttg cttttaccaa actatcaaca agagttaaat
     7261 tctaaatcca tccgtacttt agaagaatta ataagctttt taatctccgc attaaataga
     7321 caaaatggaa agcaatttag tgaatttttc gattttttgg ctaccttatc taaaagtttg
     7381 caagtaagta aagataaaaa aatcagagac ttggctaaaa ttacttctat tagaatttca
     7441 aaaactatgg acagcgaaag tatttatttg ctttctaaaa aatggaaaga atttgaaaaa
     7501 aattataacg aaaatgattt agaaggcgga ttaagaagat atggcatcgc aaaatatgat
     7561 gattttgata ccgtggttaa aaaactttta aataagttag aagaaagaag tttagaagtt
     7621 tttgctgaac ttttggcttc ttgtttgaat ccatctttgg ttgaggatct taaaattcat
     7681 ggttttgcac aaaatttact tcaaaaaccc tttcttttaa gtgaaagcgg ttttaaaaat
     7741 gaacttttag aatttgtcaa tcgtcgtgtg atggttgata atatgtatgt gcaaaaaaat
     7801 ttaaattttt ttaatgataa cttgaaaaag atttatgaac tttttatgct gttaaacaag
     7861 tccaatgagc aaaatatgga ttttataaat accttaaaac ccgataaaca aggggaaata
     7921 aaacttagtt ttgaactttt aaaacaaaaa tttatacaac ttaatgagag gattaattct
     7981 ttaaatgcac aaattgaatt tacgcaaaat ttagaagagc gtgaatcttg gagtgtttta
     8041 aaagagcttg agagattgga tgaaaattac aataaatata aagttaatta ttctttagca
     8101 ttattttcta taaaaaatta tcgttttatt atggaaaggt atggggtagg tagcttaaat
     8161 gaaatttttg tgcgttttaa aaaaatttta aaagataatt gctctgaatt tgatgagctt
     8221 tggatgatag atgaaaagag ttatcttatt atttcacctg gaagaaataa agaaaaagtg
     8281 gcacagcttg tccgagaaaa tttaaagact attgaaaatt ttcgttttat ttataagcaa
     8341 gatattatta ctccaaaaat tatcacagct tatttggata agcaaagtaa gccccatgct
     8401 aatattttag aagaattaat gaatcaaatt tcaaatttag atgaaagaaa caatgcaaaa
     8461 gatcagtaag gttgatgaat ttttagtaca aaaaagtaca aattatgaca agatcgatcg
     8521 ttttgttatg tttagaatgt atgaaaaata taaaacaaat ttttcgatta aacccattgt
     8581 gcatattata ggaaccaatg gaaaaggaag tacgggtaga tttttaaccc agcttttaga
     8641 aggcttgggt tttaaagtgg ggcattatac cagtccgcat atttttgaat ttcgtgagcg
     8701 cttttataaa aatggagata ttattagcga aaatgattta gagctcgcgc ataaaaattt
     8761 gttagatatt tttaaggata atttaaaaaa acttagctat tttgaatatg ctactttttt
     8821 agcagtcgag ctttttaaag attgtgatta tgcgattttt gaagcaggag ttgggggtga
     8881 atatgatgca acttctgttt ttgataaaag cttgagtatt tttacaaagg tgggatttga
     8941 tcatactcaa attttaggag atagtttaga aaagattgct agaacaaaat ttaaagttat
     9001 ggcaaaacaa gctttgattt caagcgagca agatgaaaga gttttacaaa tggctcaaaa
     9061 aatagcattt ttaaaaaata caaaattata tttttcatgg cagttaaagg atgaaaattt
     9121 aatgcaatta aatgagtatg ttcaaaaata cgatttgcct gaatttttaa gacacaattt
     9181 aattttagcc ttaaatgcat tagaaatatt actttctaaa gaaaaactta gtcaagcttt
     9241 gttaaaatta ggaaaattaa atttaaaggg acgctgtgag caaattgcgc cccatttgta
     9301 tgtggatgtg ggtcataatg ttatggctgc tagcgccctg tgtaaaaaat ttagtggcga
     9361 aaagcttgtt ttaatctaca attcttatct tgataaagat atttttgaga ttttaaaaac
     9421 attaaagcct attattgata caataaaaat atataaatat gtaagtttag aaagaagatt
     9481 ggctaatgat aaaatttatc aagttgccaa tgctttaaat cttaagtgtg aagaatttgt
     9541 ttctttagat gaaaagaaaa aaactttagt ttttggttct ttcgctttag tcgaaagttt
     9601 tttaaaggag tggagtgata aaaaataaat ttaccatcac tattacagat attaatggtt
     9661 caaggcattt ttatttaaat cagatcatta aaaaaatcgt tctttatgta gtagctttta
     9721 tatttttgtt tttaattttt agcggttttt atattaaata tcttgatagt aaactgagtg
     9781 atattagtac taaaagagaa gagcttttag caaaaagcaa ggaattagaa tttgctaatg
     9841 cgcaaatgca aaaaaatgtt gaagaaaaag caaagcaata tgcagctata gaagataaga
     9901 ttgcttcttt tgaagaagct ttgggcttag aagctgaaaa taatcttact attacagata
     9961 ggcttgataa tttaaagctt acaaatgagc agcaaattgg gattttagga caaattccta
    10021 atggatggcc tattgaaaat aaaggcgtta cgggaaattt tggatggagg gaacaccctc
    10081 ttttaaaaag aagagaattt catccaggta ttgatttaag agcagcgata ggtacgccta
    10141 tatatgcacc tgctagtggg gtggttgagt tttcaggata tagtgataat ggttatgggt
    10201 ataatgtgat tttgctacat aattttggct ttaaaactgt ttttgctcat atggtgagaa
    10261 aagatgttgt taaagcaggc cagtttgtca ataaggggca actgataggc tatgctggca
    10321 acacaggact ttcaacaggt ccgcatttgc actatgaagt aaggtttatt aataaaacct
    10381 tagaaccttt atatttttta aatttagaaa gaaaaaatat gaatgagttt tttaatcaag
    10441 aaaggagagt tccatggcaa tctttaataa aagcggtaac ggcacagcac ttagctccag
    10501 ttccgaaaca acagtaattt catcaggtgc tagaatagag ggtaaatttt attttgcttc
    10561 tatgcttcat gtggatggag agcttaatgg tatagtgcat tctgaaagca tagtagttat
    10621 aggaaaaaat gggaatttaa aaggtgagct taaggctgat aagatagttg ttaatggctg
    10681 ctttgaaggc gatttggagg cagatagcct tgaaatttta gcaggtggcg tggttagcgg
    10741 gaatatcagc attaaagact tagctataga aaatggcggt cgttttaatg ggactagtaa
    10801 aataaagcaa gaagagcctg taaggttgtt agagaatagc tcagaataat gcaagcaaat
    10861 ttttttgagt atttacaaga ttcaaatata gcacaattag tgctttgcga agatgataaa
    10921 gaatcttttt tgctttctca agttgctctt tttaaggatc taaaaacctt tgttttacct
    10981 gattttagag ctgaattcgg agatgattta agggcttttt ccaaggagct ttttgagctt
    11041 tgcaaggttt taaatgctta tcacaaggaa aaagatacta aaattcttat ttcccctttg
    11101 tctaccatac ttaaaaaatt acccggtcaa aaacatttaa aaaattacaa actttctaag
    11161 aaaaatgttt ttaatttaag tgaatttaaa aatgagctca acaagcttgg atatgaattt
    11221 gtggatatgg ttcaagataa gggtgaggta agtatacgcg gagagattat tgatatattt
    11281 tgtatcaatg aagaattacc tactagggtt ttgctttttg gagatgagtt agaaagcatt
    11341 agaaaatttg atcctatgaa tcaaaaatca tttcccaaag aatatgaaga acttgaaatt
    11401 tgtccttttt tgacatattt ttctgaggaa aattatgaaa attttaaaga caaattagaa
    11461 aatttcaata gcgatgtttt gattaatgat attaattctt taggattttg gtgtattaat
    11521 gatttttgtg attatttaga acttgatttt ataagtatca aaaaattcaa tcaagaagaa
    11581 tgggataaag atcttagcaa aatcaatgct aaaattatac cccaagcctc tgtttataag
    11641 gatttaaaaa gttcttacaa taaagacttc ttttctttga aacaaaataa aaaaattacg
    11701 attttggcta aaaatgaagc tttgtttaag gctttagagc ttgaaaatac acaaaatatt
    11761 tcttttcaaa aaagcgattt gatccttaat ttaattagca atcaagaact tatcatctca
    11821 ttaaatcata aagaaaaaca aaaatataag cgtaaagcaa atttgattat agatgagtta
    11881 aaaattggtg attttatcgt tcatgaggat tatggtgtgg gtaaattctt aggtcttgaa
    11941 atgattagca ttagtggggc taagaaagaa tttgttgcca ttgaatatca aaatagcgat
    12001 aaacttcttt taccggttga aaatctttat atgatagata agtatttagg agctagtgga
    12061 ggcataccgc ttttagatcg cttgggaaaa atgactttta tcaggctaaa agaaaggcta
    12121 aaaaccaagc ttttggctat tgcttctgag attgttatta tggcggctaa aagagcttta
    12181 attaaaccaa aagaaatcaa gatagattat gcagatcaag cttattttgt ttcaaaagct
    12241 ggattttctt atacacaaga tcaaaataag gcttgtgaag aaattttaaa cgattttgaa
    12301 aacggcaaag tgatggatag acttttaagc ggtgatgtgg gttttggtaa aaccgaagtt
    12361 gcgatgaatg ctatttatcc cgtggtaaaa agcggttttt gtgctttttt ctttgcgcct
    12421 accacgcttt tatctcatca gcattataag agtttaaaaa agcgttttga gccttttggc
    12481 attgaagttt ttaaactgga tcgctttaca agcactaaag agaaaaaaac tttaatgtta
    12541 aatttagaac aaaacaaagc ctgcgtggtg attggcaccc acgcactttt aaatgtagaa
    12601 tgtgaaaatt tagcccttgt tatcattgat gaggagcata aatttggagt aaaacaaaaa
    12661 gaaaaattaa aagaattaac ccaaaattct catcttttat ctatgtctgc tactcctata
    12721 ccaaggagtt taaatcaagc tttaagctct ataaaatctt atagtgtttt acaaacccct
    12781 ccagaagata ggcttgatgt tagaaccttt gtgaaagaaa atgatgatgc gcttttaaaa
    12841 gaggctataa caagagaatt aagacgcggc ggacaaattt tttatataca caatcatatt
    12901 gcaagtatag agcaatgtaa aaaacattta cttgatttat ttaaaaattt aaggattttg
    12961 attttgcatt ctaaaattga tgcgaagatt caagaagaag aaatgcttaa atttgaaaac
    13021 aaagaatacg atttactttt aagcacttct attgttgaaa gcggtattga tctgcctaat
    13081 gcaaatacta tgatagtcga aagaagtgat agatttggaa tggctgattt gcaccaatta
    13141 cgcggccgtg taggcaggag tgataggcag gggtattgtt attttttagt tgaaaataaa
    13201 gaagaactta ctcaagatgc acttaagcgt cttgtttctt tagagagtaa ttcttattta
    13261 ggagcaggtt cagttttagc ttatcatgat cttgaaattc gcggaggcgg aaatttgcta
    13321 ggtatcgatc aaagcggaca catagagcaa attggactta gcttgtatct taaaatgcta
    13381 gaagatgagt taaatgcact tactaaaaaa gaaagctttg aagagaaaaa aatagactta
    13441 aaacttacca tcaatgcttt tttaaattca gaacttatca atgaagatcg tttaagattg
    13501 gagctttatc gtagacttag taaatgtaaa aatatagatg aagtctatga aattgaaggt
    13561 gaaatcgagg accgctttgg aaaacttgat ctttatacga agcaattttt aatgctgatt
    13621 ataattaaaa ttttagcttt ggggaaattt aaaaccataa gcaattttga gcaaaatata
    13681 caatttgtaa agatcaatga tgaaaaagag tttattaaag caagaagcaa agatgatgat
    13741 gatattatag aagcagtttt aacgcattta aggaaagata aataaatgat tgactgggat
    13801 aaaacttatg cggcaattta tagatctaga aaagattatt taaaacccat tatagatctt
    13861 gataatatca gcttaaatga tttattgggc atggaagaac aaaaaaatgt cctttatcaa
    13921 aatactttaa attttatcca taataaagga gcaaatcacg cacttttatg gggtgctaag
    13981 ggtacgggta aatcaagctt gattaaggct atttttaatg aatttaaaga caaaggctta
    14041 aggcttgtag agttagctaa agatgattta tttgctttag ttgatattat cgatgagtta
    14101 agagaacagc cttttaaatt tatattattt tgtgatgatt tttcctttga aaaaaacgat
    14161 gatagttata aatttttaaa gcccttgtta gagggtagta tagaagcacc tccgcaaaat
    14221 attattattt atgcgagttc taatagacgc catttattaa gtgaaagtat gagtgataat
    14281 caaggagttc aagttactca tacagagctt catgcaagcg atgcggctga ggagagattg
    14341 agtttaagcg atagatttgg cctttggctt agtttttatc aaggaaattt aaacgagtat
    14401 ttaaagcttg ttgattttta ttttaaagat ataaaatgcg ataaagagct tttgcataaa
    14461 aaagcaaaag aatttgcaaa tttaagagca agtagaagtg gaagaactgc aaagcaattt
    14521 tatttagcct ttaaggagag tattgaatga atggagctga tatttttaaa aaacttcttg
    14581 cttgcaattt ggattttaaa gaatttgatt ggcttgagaa tcaaggcttg agcgattttg
    14641 agcttttaat ttctgtgatt ttaacccaaa atactaaatg ggataatgtc ttaaaggcat
    14701 taaataactt aaaaaatgcg cgaatttcaa gcttagagca gctttcaaat ttatccaatc
    14761 tagagcttgc tactctgata aaaccaagtg gattttacaa taccaaagcc aagcgtttaa
    14821 aagaactggc aaataagatt ttagatactt atagcaatat agaaaatttt aagaaaaatg
    14881 tagatcgaga atggctttta aatactaaag gtttaggctt tgaaagcgtg gatagcattt
    14941 taaattatct ttgcaaaaga gaaattttgg ttgtggatag ctatacgcaa agattggcta
    15001 cacatttggg ttatgaattt gaaaattatg aagaattgag agaatttttt gaaagcggca
    15061 tagaaaacga gcaagaaaat ttgtgtcaaa ttttagaaaa aaaatacgag ctttttgaac
    15121 tttatcaaat tttccatgct gcgattattg cttttggaaa agttgccttc gagggagtaa
    15181 aattgacttt agagggtgaa aatttgattc aaaatttaaa ggaagaataa tgaaagcaaa
    15241 aggaagtgat ttaattcctg tattgagtat agctggaagt gattgtagtg gtggggctgg
    15301 catacaagct gatcttaaaa cttttagtgc tcacaatctt tttggtatga gtgttgtttt
    15361 gagtgtggta gctgaaaata cagcaagagt gatttcagtt catgacatac ccgttcaaag
    15421 cgtggatgag caaatgcttg ctgtttttga agatatagtg ccaaaggcta ctaaaatagg
    15481 aatgatagga acttgtgagc tgatggagtg tgtggctaga aatttagaaa aattcaaacc
    15541 ccaaaatata gttatcgatc ctgtgatgtt tgcaaaaaat ggttttgctt taatgccaca
    15601 agaaaattgt gattttttta aaaaaaccat agtgaaattt gcagatattc ttacgcctaa
    15661 tatcccagaa gcggaatttc tttgcgattt taaaataaaa aatgaagaag atatgataaa
    15721 agcggctaaa tatttatgta cgcaaggagc aaaagctgtt ttgcttaaag ggggacatag
    15781 tgaagaaaat gccaatgatg tgctttttga tggtaatgaa atttttattt taaaaggcga
    15841 acgcatagaa acaaaaaaca ctcatggtac aggttgtaca ctctcttcgg caattgctag
    15901 taatttagcc ttgggaaaag atttgtataa tgctgtaagt gaggcaaaag aatatgtaag
    15961 aaatgcgatt tattattctt taaatttagg gaagggctgt gggccaacta accatttttt
    16021 caggttttta aatgaaaaat gatttagatc ttagtcttta tcttgtagca agtcgtggaa
    16081 aaaaaagtga cgagtttttt ttaaacacgc ttgaagaagc gataaagggt ggagtaagta
    16141 taatccaact tcgtgaaaaa gaattaagtt caagagaatt ttacaagctt ggcttgaaag
    16201 tacaaaagct ttgcaaggag tatgaaatac cctttttaat caatgataga atcgatatcg
    16261 ccttggcttt agatgctgat ggggtgcatt tagggcaaga ggatttagaa gtgcgctttg
    16321 caagaaaaat tttaggtaaa gaaaaaatca taggcttaag tcttaagaac ttagaacaat
    16381 taaaagatat tgacggggct gattatttag gttgtggtgc gattaaggct actccaacta
    16441 aagaaagttc tgttataagt tttgaaacct tgagtcaaat ttgtgaaaaa agccctatag
    16501 gcgtggtagc aataggcggg attgataaag agctgattaa agagctaaag ggcattaaaa
    16561 taagtggcat tgcagtagtt agagccataa tggatgcgca aaatgcttat ttggcagcta
    16621 aagagcttag gcaagaaatg aatgaaaatt tatcttttaa atgagactgt ttttgagggt
    16681 gtggaaaatc ttgttttaaa tgagatagtt ttttacgatt ttggtgtcaa tttagatgaa
    16741 tttgatgctt tactttgtac ttcaaaaaat gccctaaaag ctttaaaaaa aacaaaaaat
    16801 agtttaaatt tagatattaa tgtatatgca gtagggcaaa acactgctca atttgctaag
    16861 gatatgggtt ttaaaaaggt tcaatttgcg ccaaaatctt atggaagtga gctttttaat
    16921 cattttaaag aggaattaaa aaaccaaaaa tgcctttatt taagggctga aaatatagct
    16981 tctactttaa atttagatct tagaacttat ggggtagatt tacaagaaat cattgtttat
    17041 aagaatgttt ttaaaaaaag caaacaaaca atccttcatc ctgctatttt tatttttact
    17101 tctcctttga gtgtggaaaa tttttttaaa caatatgatt taaaaaagga agataaggtc
    17161 atagcaatag ggcagagcac agcaaaaaaa cttactcaaa aacttactca tctagataat
    17221 ctttttataa gttctaaaca ggatttaaaa gagtgtgtga aattggctaa aagtcttatt
    17281 tagtttgatt ccaaaatgat tcttttgtat gcaagataaa ggttttattt attaaaattt
    17341 catcattgac atttttttgt gtatttaacg ctatactcat atgcgcgatt atgataccat
    17401 cttggcttaa atttgcatct ttgttgatcg cttgaaattt gaaattttta cactgggcta
    17461 tgggatagtg gtattgtatt ttgattttat cgtttaaatt aggatagtga agcgtgatag
    17521 aatctaaaca ttcctttccg tctaatttag cttgataaag taaatattta acgagtttct
    17581 catcggctaa aatttgggct tgtaaataat aataagcatc ttttacaaat cttggtatat
    17641 aacttgaagt ggtgatattt aaactaagcc atatctctaa agcactgatt aaaaatacca
    17701 aggatagtaa aatataggct cgtttcatat gaataacctt tttgtaaggc aatattcttg
    17761 ctcttgttct tttaaacata ctttaagttt ttgtttttgt atttcaaata agcttacatt
    17821 atccataaat atagagtatt gctcaagctg attattaaaa taaggataga gctcataatg
    17881 aattttatct tctttaagaa ataattttat tctagcttgg atagggataa atttaccctt
    17941 aaaagaagca gtgatattat tttctgaatg aatgaatatt tttttaattt ctttatttac
    18001 taaagcataa atgatatttt gctcatcatt atacaattct tttcgatttt gaagttgaag
    18061 tttaaaatta ctattgggag aatataaact tgtattgttt tctaaaataa ggctagaatt
    18121 taataatttt tctttattat catcaagata taataaatca tctttaagca aacagcttat
    18181 atgatttggc tcaaaagtaa tattagtgca agtttgaagc aatttttcta atcttaacac
    18241 acttaaatga gtttttagta tcaaatcttt catttttaat tgttgattgt ttaaataata
    18301 aaattcccac aatgtccttg atagaaaaag tgctaaaaat ccgattagaa ttaatacaag
    18361 a
//
LOCUS       DAQUWA010000036        17728 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.036, whole genome shotgun sequence.
ACCESSION   DAQUWA010000036 DAQUWA010000000
VERSION     DAQUWA010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17728
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.036"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            30..347
                     /locus_tag="R8X70_001065"
     CDS             30..347
                     /locus_tag="R8X70_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HEF2928849.1"
                     /translation="MSVLVIGADEITPIKAVLYDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLDKEFSCS
                     KVE"
     gene            347..1042
                     /locus_tag="R8X70_001066"
     CDS             347..1042
                     /locus_tag="R8X70_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004289207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928850.1"
                     /translation="MLFGFDDKREFIPRVYSSLCKQELVKTFLIQYNASIDSALRIPL
                     SYAKSAKDLKMPFQNFLQDVIHTPFGKIKNIDKNLTLNISYFQKRKSLIFKTKIFQNV
                     DILRLLRAYFRGICFDAQVLFDFYVYDKISHQNQNRSIVQNDNLIIIDNKIAVLPLCK
                     EVDLQNLNIDNEIQKISKFIYQNQFEQIYIVCPRNKKFTHFIQIKHFLCDLNKTMLKL
                     VPYSITNKLIRRK"
     gene            1042..1533
                     /gene="fldA"
                     /locus_tag="R8X70_001067"
     CDS             1042..1533
                     /gene="fldA"
                     /locus_tag="R8X70_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HEF2928851.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVLNVADIDAAKINSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAE
                     NLKNAGANLVGEVSTDGYTFESSDAVVDGKFVGLALDNDNQEDQTEARIDAWVEQIKA
                     HFA"
     gene            1500..2378
                     /locus_tag="R8X70_001068"
     CDS             1500..2378
                     /locus_tag="R8X70_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEF2928852.1"
                     /translation="MGRTNQSSFCLIFKNIGFLCRYCIVFLILTIPLFSKPDQKITPI
                     IEKAKDYFFIEKDLKLTHYHTSYRIFVAKSKIKYKKYKVIYLLDGNAFFSRFLNLYNY
                     LPKEDILIVGIGYDSPLAFDTTHRTKDYTPKVQGLEFQNGGGSFEFRQFIKTELLPYI
                     NTHYETSEDFQILFGHSFGGLFALDTLFNDTKLFSHYFIISPSLWWGGSEFIPKRISL
                     SNCPQIYMALGSAESNSSIKKAKAKISVKELGMQILNHSACEVEFKLFENETHGSVIE
                     KAMIWAIENIKSEPID"
     gene            complement(2383..4044)
                     /locus_tag="R8X70_001069"
     CDS             complement(2383..4044)
                     /locus_tag="R8X70_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEF2928853.1"
                     /translation="MKDFVFIQNENLIPLPDEINIWENCKDEEVLISNEKAQKAQIYA
                     PEINFYLKSSQDEILEKSKNILKLYEARANVYDLGLDLEQNKEVKNRIILVDSDDTMA
                     DFLKKQNFKIISLKNEEILAVFGSIGELCAVILNQGEEVEIDFDILLFNTNSNDIRKD
                     FTRQSGCYNISNFKNQESLLKFLQDKSPKYTYKTYITYDSSVCQYHERRSEHCAKCAE
                     ICPTIAILKDDENKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFELCEFYKEK
                     KILIIPKKMSLENLNIKLPKDVLPFMIEGEKWLSSMHFLTLLQSSGANLVFYTDFISR
                     GSAEAIDLLNTFFERKFQKEAIFTAKDEKELQNALGKQEFIENLSFDFHNNTLTTREN
                     FAKRMQNLIQNDDFGVKESGEWLRYGKIEINANTCTLCLSCVGACNVGALIADTKENA
                     LKFNASLCTTCGYCEVSCAEKDTLKLTRSGMEFNPNYFEYQTMAKDELFACIECGKEF
                     ATKKAVEKIANLMKPKFGNDESKIKTLYCCADCKAKVMIEAMRKG"
     gene            4114..5436
                     /locus_tag="R8X70_001070"
     CDS             4114..5436
                     /locus_tag="R8X70_001070"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEF2928854.1"
                     /translation="MNKFRTFPQIGSLIDDESLKEYPFYLRSYFCKSVVAKLKANISE
                     DLLDKNTILEKIQQEIQKHLRKDLQSVINATGVVIHTNLGRSVIDESIFEKSKDVLCN
                     YANIEFDLESGKRGSRYALVLEKLKMLFECEDASVVNNNAAAVFLVLHSLCFDKELVT
                     SRGELVEIGGSFRVSEVIKAAGVKLCEVGTSNKTHLKDYEKAINENTKMLLKTHKSNF
                     ALIGFHSEVGIKDLGNLAKEKGLLSYYDLGSGWCENLNPKLIKNEPKIKDLIKHCDIL
                     SFSGDKLFGSVQAGIILGKKELIDKIKENQLLRMLRVDKITLALLNESLKIYLEKDYE
                     KITSLKLLNDEIAHIKEKALRVQNEIQIKSALKMSKSLVGGGSMPDKTLETYVLAFNG
                     NALKLQEKFRAKNIIGRIENEAFVLDFRTIREKDLSKLIQIINTMENL"
     gene            5433..7232
                     /gene="selB"
                     /locus_tag="R8X70_001071"
     CDS             5433..7232
                     /gene="selB"
                     /locus_tag="R8X70_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEF2928855.1"
                     /translation="MNSLLIGTAGHIDHGKTSLIKAINGFEGDSLKEEKERQITINLS
                     FSNLNYKQKHLSFIDVPGHKDLVKTMISGAFGFSACLFVVDINEGLKEQSIEHLEVLE
                     LLGVKDIILVLSKCDLCENPKEQEQKILNSLEFIPMKVFHTSIKDQESIERLKNYLLN
                     LECKNANANLVFRYYIDRVFSLKGIGTIVTGSLNEGKISLNEKIICLDNQKELVVKNI
                     QNHESNFAEISAFNRVALSLNCDYKELKKGYVLSKKGFFKGFKECDVLIKAKRLKNEK
                     MLFCVGAKSIECKISILKELENNEFFAHLEFEKNLFLCFNEKFILLQNNRVVGGGEVL
                     NPVSEPLKKEQKNKFLMLLKNKELKKAFEFLKNTHKYGFGLLSSYQRFKLSHEEALNL
                     AKELNGVFIDEKNLNIYNLLALDELKKFISFILEKNPYAMLSASSLALRLPWASAEFC
                     EFGLQNLSNLLEFEKGVYFKKGIDYEKLREKNNDELYNILKKQGIKPQAPYNLYEFLE
                     LDRKSGDEILKKLTKQNRVIRLSHNLFVEKNALDKLMQECLEILKSQSLDIQSMKERF
                     NLSRKYAIAYLEYLDKDERVQKKDEKRFLKTNI"
     gene            7281..7991
                     /locus_tag="R8X70_001072"
     CDS             7281..7991
                     /locus_tag="R8X70_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEF2928856.1"
                     /translation="MKKISLILACSMSLFAASNSEISDFYSKSIKAQFPNATVSVGNR
                     QKVGNTGFESVIVTITLEGQKQEQILFTKDNLIVPDIIDLKTKTSYAQEYEMKKFQEA
                     RANFTKNVKPVVQKETMLIALGDKSKPAIYVFSDPECPYCRDHLAQIKDELKNYQVNY
                     ILTPVHGKSAFEKSALIYKESKKAKSDDEKIAILNKYYDANIKSYPKVSDSELKEVFS
                     LYEKYRSLGLSATPTIIK"
     gene            8036..8518
                     /locus_tag="R8X70_001073"
     CDS             8036..8518
                     /locus_tag="R8X70_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928857.1"
                     /translation="MSACAKPAFVQSSIQTSNEGIFLKAKQGQSFSITLQNPSKIQST
                     LKDELALRLKNLGLKEVSLNADYEILINLVDFKKHSYAQRITSSGRFFYDFDPFENNG
                     ERYIENYYTMQVNIQIGSKNTLQKTSLFARTAYLSDKKRCQLSLENKIIDQISSFFYF
                     "
     gene            complement(8520..9815)
                     /locus_tag="R8X70_001074"
     CDS             complement(8520..9815)
                     /locus_tag="R8X70_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2928858.1"
                     /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSFYALELQGANEFLVGLL
                     VGVYALTQMALQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSWADNIYTMLIGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAIMGSFIGLSFAASMVISPLMSAKWGLSSLFD
                     LSAVLSLLCIILLYTVVPKENKLTHENTKTPFFHLIKQKNLALMNFTNFMQKMLMSIA
                     FLSIPIILVKHLGFDEHKLWIVYTASMIAGFIAMGFSGSLGEKRGLAKQILLLGIAFF
                     ILSYIFFVFSSTITFFIVAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLNKLELLAIILVILSIVWFIALLYLKNPSEFKNIYLPLETTL
                     NLSEFGKNLGVVDIYKNSKNLVIKFDSKLTNKEELESKI"
     gene            9957..10412
                     /locus_tag="R8X70_001075"
     CDS             9957..10412
                     /locus_tag="R8X70_001075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEF2928859.1"
                     /translation="MNRFQTFSLAMEGKVNIELLAAYKDKIETLSDETLFRFCYLELK
                     NPIIGLILGVVPAFILSGLTFDRFYKGDMGLGFAKMAMWAFIFIGLLIAGFFDSSSML
                     VVWIFNIVALFIWNILDFFLVWQGIKNDNLAKIIQFLEQDNENFISNKQ"
     gene            10384..10992
                     /gene="rdgB"
                     /locus_tag="R8X70_001076"
     CDS             10384..10992
                     /gene="rdgB"
                     /locus_tag="R8X70_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEF2928860.1"
                     /translation="MKILLATSNKHKVIELKELLKEFEIYAFDEILTTFEIEENGNSF
                     KENALIKARAVFNALDENQKNEFIVLSDDSGICVDVLGGKPGIYSARFSGKGDDKSNR
                     DELVKQMRVLGFEKSKVHYVAAIALVSLEGEWTMHGTMHGHVINTERGENGFGYDSLF
                     IPKGFDKTLAELSHNEKNQLSHRFKALELTRIVLKVLNKGKG"
     gene            complement(11026..13488)
                     /locus_tag="R8X70_001077"
     CDS             complement(11026..13488)
                     /locus_tag="R8X70_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HEF2928861.1"
                     /translation="MFAKFLKIFIYHPKSTFFATLFICLFLSFFASKLSVDASAESLL
                     LEDDKDLKIFRELSKHYKSDNFLLLAFKPEDENPFSGKNLNKLKELHQELEQVSLVER
                     VFSIINAPLLQSSENTDLKELLKNIPNIQSKDINLTKAQNEILNSPFYKNNIISKDGK
                     TTGLIIYLKPDTIYNELIEKRDLSTDENKKEQIRLAIKKHQEQQKIITKQGLDTIKNI
                     IKKYEKNEDRFYLGGVSMIADDMITYIKSDLMLYGISLVFLLACALYCFFRAWRFVFL
                     PLFICFISLSAASGVFALLNFQITVISSNYVALVLIITLSVVIHLITHFIEISKLYPK
                     AKIERLVLQTLLAKANPSFYAIITTMIGFFSLMLSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKLKKYYKKEFKFNFLAFCAKTSLDPKKRSIIYILSITTIILALIGIS
                     KLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLDIIIRFPDNKNNPSLNDVFDSFE
                     SEFDALATKDTYWFNSQKTRIAKKVHEFLENKEFIGSVLSLNSLLSLGKNINDGKDLD
                     DFTLAFLNENLPPELKQELLSPFVNIEENELRFSIRIIDSDPKLRRNEFLTNLKQELE
                     TLLKNDGVEIQITGIMLLYNNMLQSLFSSQFDTLVFVILVIFVLFIIIFRSLKFSIIA
                     LLVNIIPLSMVFALMGILGIPLDMMSITIAAIAIGIGVDDTIHYIYRFKEEIKTKSVE
                     EAILASHLSIGSALYYTTIGIVLGFSVMMSSNFIPTIYFGVLTVFVMILLLSGSLFLL
                     PSLLVTIYTKKTKALNPHKAHK"
     gene            complement(13488..14057)
                     /locus_tag="R8X70_001078"
     CDS             complement(13488..14057)
                     /locus_tag="R8X70_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEF2928862.1"
                     /translation="MKKIFLILALSLNIFALQLDEISNTMQKNINKSLQLLQNNKEDK
                     KQAADGIFLIFDHIIDYKLMAQLSLSKDYAKLNPKEQEKFASAFEASLKKSFTDKLDL
                     YKDQVLMVKNGELKNAKRYFLTSSMIVDGEEKNIIFKFYNNNNDWLIYDIDVLGVSIV
                     QTYRSQFGDILANQDFDTLLQKLENITIE"
     gene            complement(14067..14765)
                     /locus_tag="R8X70_001079"
     CDS             complement(14067..14765)
                     /locus_tag="R8X70_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEF2928863.1"
                     /translation="MKLKLISCILLFSTIFAFANELDLNDFEEEYQSYKVNDPLYGYN
                     KAMTSFNVALYDYSLRPILKGYNAITPEFIRTGVRNFFDNLFAPLRFVGNVLQFKFEE
                     AGEEFKRFSANTIMGFGGIMDPASKMGLKKHPADLGTVLAHWGVGSGFHIVLPILGPS
                     NLRDTLTLPATWYASPTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYYNTPNLYPF
                     IRDAYEQRRNELSK"
     gene            complement(14806..15249)
                     /locus_tag="R8X70_001080"
     CDS             complement(14806..15249)
                     /locus_tag="R8X70_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEF2928864.1"
                     /translation="MIFYSYEEFKEDVKILAKEIKEDFNPDALLAIARGGMSLGHSLA
                     VALQTRKLFALNSIHYDDTKKLDTIEIFNIPDLSKYKKILLIDDIVDSGESLAEIKKV
                     LLEKFPHIELKVATIFYKKTALLEPEFKVKEAKEWVEFYWDIHID"
     gene            complement(15265..16584)
                     /locus_tag="R8X70_001081"
     CDS             complement(15265..16584)
                     /locus_tag="R8X70_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEF2928865.1"
                     /translation="MDFFKLKENGTNVRTEVVAGLTTFLAMVYIIPVNSSIVGNTGMP
                     IEALITATALITIVATAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQKIPWQSALGAV
                     FISSIIFLILSFTSFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGIITPNKDTLV
                     SIGNFKNPHVLFGIFTLILIVFFWAIKLRGAFILGVLISSIIAWIFGIDNASFPKQIL
                     SLPNFSSDNGLGAIFLELDIKSALNITMIPIILTFFITQLFDSIGTITGIGERGKIFD
                     DAKDGEKKLGKTLMADATGSALGALGGTSTVTAFVESTTGVESGGRTGLTALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAVASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLISLGNFLLIALQ"
     gene            complement(16595..17659)
                     /gene="mqnE"
                     /locus_tag="R8X70_001082"
     CDS             complement(16595..17659)
                     /gene="mqnE"
                     /locus_tag="R8X70_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HEF2928866.1"
                     /translation="MKNLLEKLENEERLNENEANALWDLDLFTLAKFAHKKRTKFHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMSHEEIMKIVDDTITRGTKEVH
                     IVSAHNKDTSWQWYLEIFKMIKEKYPQMHIKAMTAAEIDFLHRRFKMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEIRKKICHGKVSSENWLKIHKLWHDKGRQSNATMLFGHIEER
                     HHRIDHMLRLRALQDESGGFNAFIPLVWQRDNSYIQTDKIMDSEEILKTIAISRLVLD
                     NIKNIKAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTNLKTFIEMI
                     KTANLTPVERDSLYNELQTY"
BASE COUNT         6233 a         2557 c         2852 g         6086 t
ORIGIN      
        1 tttaaaataa aaatcacaaa ggagagctta tgtcagtttt ggttattggt gcagatgaaa
       61 taacacctat taaggctgtt ttgtatgatt taggtgcaaa aaaaatagag cattgggatg
      121 cgcgcaatga aaatagagtc aatcgcaaac ctattccttg tgatacagaa tgtatagtaa
      181 tgcttacgag tttcttaaat cacaatacta tgaaaaaaat taaaaacgag gctaaaaaac
      241 gaaaaattcc attagtttgc gcaaaaagaa gcgtaagttg tgtgtattgt gagtattgta
      301 agatatttaa tttagataaa gaattttctt gctctaaggt tgaataatgc tatttggatt
      361 tgatgataaa agagaattta tccctcgggt ttatagttct ttgtgcaagc aagagcttgt
      421 caaaactttt ttgattcaat acaatgctag tattgatagt gctttaagaa tcccgctttc
      481 atatgcaaaa agtgcaaagg atttaaaaat gccttttcaa aacttcttgc aagatgtgat
      541 acatacgcct tttggcaaga taaaaaatat cgataaaaat cttactttga acatttctta
      601 ttttcaaaaa agaaagagtt tgatttttaa gactaagata tttcaaaatg tcgatatttt
      661 aaggctttta agagcttatt ttagaggaat ttgttttgat gcgcaagttt tatttgattt
      721 ttatgtatat gataaaattt ctcatcaaaa tcaaaatcga agcattgttc aaaatgataa
      781 tttgattatc atagataata aaattgccgt tttacctctt tgcaaggaag tggatcttca
      841 aaatttaaat atcgataacg aaattcaaaa aatatctaaa tttatatatc aaaatcaatt
      901 tgaacaaatc tacatagttt gtccgcgtaa caaaaaattc acacatttta ttcaaataaa
      961 acatttttta tgcgatttaa ataaaactat gttaaaatta gttccgtatt caataacaaa
     1021 taaacttata aggagaaaat aatgtcagta gcagtaattt atggaagtgc tatgggaaat
     1081 acagaaggag cagcaaatac aatcgcttca aaattaggaa ttagtgatgt tttaaatgtt
     1141 gcagatattg atgcagctaa aattaattct tatgataaat taatttgtgg aacttctact
     1201 tggggaagtg gtgatttaca agatgattgg gatggttttg atttttcagg tcttagcctt
     1261 ggtggaaaaa ctgtagctgt atttggaatg ggtgatagtg aaagctattc agacactttc
     1321 tgcggtggta tgggaaaact tgcagaaaat ttaaaaaatg caggcgcaaa tttagtaggt
     1381 gaagtttcaa ctgatggcta tacatttgaa tcaagcgatg cagttgttga tggaaaattt
     1441 gtaggtcttg cacttgataa tgacaatcaa gaagatcaaa ctgaagcaag aattgacgct
     1501 tgggtagaac aaatcaaagc tcattttgct taatttttaa aaatatcggc tttctttgcc
     1561 gatattgtat tgtattttta attttaacta ttccactttt ttcaaaacca gatcaaaaaa
     1621 ttactcctat tatagaaaaa gcaaaagatt acttttttat agagaaagat ttaaaattaa
     1681 cgcattatca tacaagttat cgaatttttg tggcaaaaag taaaataaaa tataaaaaat
     1741 ataaggtaat ttatttgctt gatggcaatg cgtttttttc gagattttta aatctttata
     1801 attatttgcc taaagaagat attttaattg ttggtatagg ttatgatagc cctttggcgt
     1861 ttgatactac ccataggaca aaagattata ctcctaaggt tcaaggtttg gaatttcaaa
     1921 atggaggagg tagctttgaa tttagacaat ttatcaaaac agagctttta ccttatatta
     1981 atacacatta tgaaaccagt gaagattttc aaattctttt tggacattct tttggcggac
     2041 tttttgcttt agatacttta tttaatgata caaagctttt tagccattat tttattattt
     2101 caccttcttt gtggtggggt ggtagtgaat ttatacctaa acgaatttct ttatcaaatt
     2161 gtcctcaaat ttatatggct ttaggttcgg ctgagagtaa ttctagcatt aagaaagcta
     2221 aagctaaaat aagtgttaaa gaacttggta tgcaaatttt aaatcatagt gcttgtgaag
     2281 ttgaatttaa actttttgag aatgaaactc atgggagtgt aatagaaaag gctatgattt
     2341 gggctataga aaatatcaaa tcagagccaa ttgattgatt atttatcctt ttctcattgc
     2401 ttctatcatt acctttgctt tgcagtctgc acaacaataa agggttttta tcttgctctc
     2461 atcattgcca aatttaggct tcatcaaatt cgcaattttt tctaccgctt ttttagtggc
     2521 aaactctttt ccacactcta tgcaagcaaa aagttcatct tttgccatgg tttggtattc
     2581 aaaatagttg ggattaaatt ccattccact acgcgtaagt tttagagtat ctttttcagc
     2641 acaacttact tcgcagtatc cacaggtagt gcataatgaa gcattgaatt taagtgcatt
     2701 ttctttagta tcagcaatca aagctcctac attacaggct cctacgcaag aaaggcagag
     2761 agtacaggta tttgcattga tttctatttt tccatatctt aaccattcgc cactttcttt
     2821 tacgccaaaa tcatcatttt ggatcaaatt ttgcattctt ttggcaaaat tttctctagt
     2881 agtaagagtg ttattgtgaa aatcaaaact taaattttct ataaattctt gctttcctaa
     2941 agcattttgc aattcttttt catctttagc ggtaaaaata gcttcttttt gaaattttct
     3001 ttcaaaaaaa gtatttaaaa gatctattgc ttcagcactt cctcgtgaaa taaaatccgt
     3061 gtaaaaaacc aaatttgcac cactgctttg caaaagagtt agaaaatgca tagaagaaag
     3121 ccacttttca ccttctatca taaaaggcaa aacatctttg ggtagcttta tatttaaatt
     3181 ttctaaagac atttttttag gtatgattaa aatctttttt tctttataaa attcacaaag
     3241 ttcaaaaaaa ctttccctag gcatgggtgc ataatcaagc gaaccactag ggcacacgct
     3301 gatacagcct ccacagccta ggcaatctac ttgagaaaat tctaaatgct tgttttcatc
     3361 atcttttaaa atagctatcg tagggcaaat ttcagcacac tttgcgcaat gctcactgcg
     3421 tctttcgtgg tattgacata cgctagaatc ataggtaata taggttttgt atgtgtattt
     3481 tgggctttta tcttgtaaaa atttcagtaa actttcttga tttttaaaat tgctaatatt
     3541 ataacagcca ctttgtcttg taaaatcctt gcgaatgtcg ttagaatttg tattaaaaag
     3601 taaaatatca aaatcaattt ctacttcttc tccttgattt aaaatcacag cacaaagctc
     3661 gcctatgctg ccaaatactg ctagaatttc ttcatttttt aagcttatga ttttaaagtt
     3721 ttgttttttt aaaaaatcag ccatagtatc atcagaatct actaaaataa tgcggttttt
     3781 tacttctttg ttttgttcta aatcaagccc taaatcatag acatttgccc tagcttcata
     3841 aagttttaat atatttttac ttttttctaa aatttcatct tgtgaacttt taagataaaa
     3901 attgatttct ggagcataaa tttgtgcttt ttgtgctttt tcattagaaa ttaaaacttc
     3961 ttcatctttg caattttccc aaatatttat ctcatcgggc aagggaataa gattttcatt
     4021 ttgtatgaaa acaaagtctt tcattgattt tccttgatgg tcaatttgcc aaattctatg
     4081 gtaaaataac caaatatttt cttaaggctt aagatgaaca aatttagaac ttttccacaa
     4141 attggaagct tgattgatga tgagagttta aaagaatatc ctttttattt aagatcttat
     4201 ttttgcaaaa gtgttgtcgc taaactcaag gcgaatataa gcgaagattt gctagataaa
     4261 aatactattt tagaaaaaat acagcaagaa attcaaaaac atttacgcaa agatttacaa
     4321 agtgtcatta atgctacggg tgtggttatt catacaaatt tggggcgtag tgttattgat
     4381 gagagtattt ttgaaaagtc caaagatgtg ctttgtaatt atgctaatat cgaatttgac
     4441 ttagaaagcg gtaaaagagg aagtcgttat gccttggtgc ttgaaaaact taaaatgctt
     4501 tttgaatgcg aagatgcttc ggttgtaaat aataacgccg cagcagtttt tttggtactt
     4561 cattctcttt gttttgacaa agaacttgta acttcaaggg gtgagcttgt tgaaattggc
     4621 ggaagttttc gtgtgagtga agtgattaaa gctgcaggag taaagctttg tgaagtaggt
     4681 acgagcaata aaacgcattt aaaagattat gaaaaagcta taaacgaaaa tactaaaatg
     4741 cttttaaaaa cccataaatc taattttgct ttgattggtt ttcatagcga ggttggcatc
     4801 aaggatttag gaaatttggc aaaagaaaaa ggacttttga gttattatga tttaggttcg
     4861 ggttggtgtg agaatttaaa tccaaaacta ataaaaaatg agcctaaaat caaagatttg
     4921 ataaagcatt gcgatatttt gagctttagt ggggataagc tttttggtag tgtgcaagct
     4981 ggaattatac tgggtaaaaa agaattgatt gataaaatta aagaaaatca actgctaaga
     5041 atgctaagag tagataaaat cacacttgct ttgttaaatg aaagtcttaa gatttatctt
     5101 gaaaaagatt atgaaaaaat cacaagttta aagcttttaa atgatgaaat cgctcatatt
     5161 aaagaaaaag ctttaagggt acaaaatgaa attcagatta aaagtgcatt gaaaatgagt
     5221 aaaagtttgg tagggggtgg ttctatgcct gataaaactt tagaaactta tgttttagct
     5281 tttaatggca atgctttaaa actgcaagaa aaatttagag caaaaaatat cataggtcgc
     5341 atagaaaatg aagcttttgt gctggatttt aggacaatta gagaaaaaga tttatcaaaa
     5401 ttaattcaaa ttatcaatac tatggaaaat ttatgaattc gctattaatt ggtactgcag
     5461 ggcatattga tcatggaaaa acttctttga ttaaagctat aaatggtttt gaaggagata
     5521 gtttaaaaga ggaaaaagaa agacaaatta ccattaattt aagtttttct aatttaaact
     5581 ataagcaaaa acacctttct tttattgatg tgccaggtca taaagacttg gttaaaacga
     5641 tgataagcgg ggcttttggt tttagtgctt gtttgtttgt agttgatatc aatgagggct
     5701 taaaagaaca aagtatagag catttagaag tacttgaact tttaggtgtc aaagatatta
     5761 tcttggtgct tagcaaatgc gatttatgtg aaaatcctaa ggaacaagag caaaaaattc
     5821 taaactcact tgagtttata cctatgaaag tgtttcacac ttcgataaag gatcaagaga
     5881 gcattgagcg cttaaaaaat tatcttttaa atttagaatg taagaatgct aatgcaaatc
     5941 ttgtttttcg ttattatatc gatagggttt tttctttaaa aggtatagga actatagtta
     6001 ctggaagcct taatgagggc aaaatttccc tcaatgaaaa aatcatttgt cttgacaatc
     6061 aaaaagaact tgtggttaaa aatatacaaa atcatgaaag taattttgct gaaatttcag
     6121 cttttaaccg tgtggctttg agcttaaatt gtgattataa agaattaaaa aaaggttatg
     6181 ttttaagtaa aaaaggtttt tttaagggct ttaaagaatg tgatgttttg attaaagcta
     6241 aaagattaaa aaatgaaaaa atgctttttt gcgtgggtgc aaaaagcata gagtgcaaga
     6301 taagcatttt aaaagagtta gaaaataatg aattttttgc tcatcttgaa tttgaaaaaa
     6361 atcttttttt atgttttaat gaaaaattta ttttattgca aaataatcgt gttgtgggcg
     6421 gaggagaggt tttaaatcct gtgagtgagc ctttgaaaaa ggagcaaaaa aacaaatttt
     6481 taatgctttt gaaaaataaa gaattaaaaa aagctttcga atttctaaaa aatacgcata
     6541 aatatggctt tggcttgctt tcaagttatc aaagatttaa gttaagtcat gaagaagctt
     6601 tgaatttagc caaagaatta aatggagttt ttatagatga aaaaaatctt aatatttata
     6661 atctcttagc cttagatgag cttaaaaaat tcatttcttt tatacttgaa aaaaatcctt
     6721 atgccatgct ttcagcaagc tctttagctc taagacttcc ttgggctagt gcggaatttt
     6781 gtgaatttgg acttcaaaat ctatcaaatt tacttgaatt tgaaaaggga gtgtatttta
     6841 aaaaaggaat tgattatgaa aagcttaggg aaaaaaacaa cgatgagcta tacaatatac
     6901 ttaaaaaaca aggcataaaa cctcaagcac cttataattt atacgaattt ttagaattag
     6961 acagaaaaag tggagatgaa attttaaaaa aacttaccaa gcaaaatcgc gttataagac
     7021 tttctcataa tctttttgta gaaaaaaatg ccttagataa gcttatgcaa gagtgcttag
     7081 aaattttaaa gagtcaaagc cttgatatac aaagtatgaa agagcgtttt aatctttcaa
     7141 gaaaatatgc catagcttat ttagaatatc ttgataaaga tgagagggtg caaaaaaagg
     7201 atgaaaaaag atttttaaaa acaaatattt agaatatcat tataaaataa aatcttaata
     7261 tttgatttta aggaaaataa atgaaaaaaa taagcttaat ccttgcttgc tcaatgtctt
     7321 tatttgctgc tagcaattct gaaatcagtg atttttattc caaaagcatt aaagcacaat
     7381 ttccaaatgc aacagtgagt gtaggtaatc gccaaaaggt tggaaataca ggttttgaaa
     7441 gcgtaattgt tacgataacg cttgaaggac aaaagcaaga gcaaattctt tttacaaaag
     7501 ataatcttat cgttcctgat attattgatt taaaaactaa aacttcttat gctcaagaat
     7561 atgaaatgaa aaaattccaa gaggctagag caaatttcac taaaaatgtt aaacctgtag
     7621 ttcaaaaaga aacaatgctt atagctttag gcgataaaag caaacccgct atttatgtat
     7681 tttcagatcc agaatgtcct tattgtagag atcatttggc acagattaaa gatgagctta
     7741 aaaattatca agtcaattat atcttaaccc cagtgcatgg taaatcagct tttgaaaaat
     7801 cagcattgat ttacaaagag agtaaaaaag ctaagagtga tgatgagaaa atagctattt
     7861 taaataaata ttatgacgca aatatcaaat cttatccaaa ggtgagcgat agcgagttaa
     7921 aagaagtatt ttctctttat gaaaaatatc gttctttagg ccttagtgct actccaacca
     7981 tcatcaaata atgagaaaaa ttcgtctaat ttcagtttta tttctagcac tctttttgag
     8041 tgcttgcgca aagcctgcct ttgttcaaag ctctatacaa acaagcaatg aaggcatttt
     8101 tttaaaggct aaacaagggc aaagttttag tatcactttg caaaatccaa gcaaaattca
     8161 aagtactcta aaagatgaat tagctttaag acttaaaaat ttaggattaa aagaagtatc
     8221 tttgaatgcc gattatgaaa ttttaatcaa tcttgtagat tttaaaaagc attcctacgc
     8281 tcaaagaatt acaagttcgg gaagattttt ttatgatttt gatccttttg aaaataatgg
     8341 ggaacggtat attgaaaatt attataccat gcaagtaaat atacaaattg gctctaaaaa
     8401 tactctgcaa aaaacgagtt tgtttgctcg cacagcttat cttagtgata aaaagcgttg
     8461 tcagctttcc ttagaaaata aaattataga tcaaatttca agcttttttt atttttgatt
     8521 taaattttac tttctaattc ttctttattt gttagcttgc tatcaaattt aatgactaga
     8581 ttttttgagt ttttgtatat atctacaacg cctaaatttt taccaaattc gctcaaattt
     8641 aaagtcgttt ctaaaggcaa ataaatattt ttaaattcag aaggattttt taaatataac
     8701 aaagctataa accaaacaat agacaaaatc actaaaataa tagccagtaa ttctaattta
     8761 ttaagatgta aaaatatacc tcctattata cctcctataa aacttccacc atatccaaaa
     8821 gcattaaaaa gtcctaaagc tgcgcctttt tcatgtactt tacaaaattt agaagcacag
     8881 ctttgcataa tgggctcgtg caagttaaaa cctataaaaa atatcacaac cgcaacgata
     8941 aagaaagtaa ttgtgctaga aaaaacaaaa aagatataag aaaggataaa aaaagctatc
     9001 cctaaaagta aaatttgctt tgctaagcct cttttttcgc ctaaacttcc tgaaaatccc
     9061 atggcgataa agcctgctat catagatgct gtataaacaa tccaaagttt atgttcatca
     9121 aagcctaaat gttttactaa aatgatagga atgcttaaaa atgctatact cataagcatt
     9181 ttttgcatga aattagtaaa attcattagg gctaaatttt tttgtttaat aagatgaaaa
     9241 aaaggagttt tggtattttc atgggtgagt ttattttctt ttggaacgac ggtataaagc
     9301 aagataatac acaaaagcga taaaacagca ctaagatcaa aaagactaga aagcccccat
     9361 ttagcactca ttaaaggtga gattaccata gaagctgcaa aagatagtcc tataaaagat
     9421 cccattattg ccatagcttt accgcgattt tcttcagtga taaaatcact aatcattgct
     9481 gtagctactg caccaatagc ccctgcacct tgaagcattc tgcctattag cattgtataa
     9541 atattatcag cccaagagca gattaaagag cctatgataa agataatcag tcctataagc
     9601 atggtttttt tgcgtccaat tttatcactt agtattccaa aaggcatttg taaagccatt
     9661 tgagttagag cataaacacc cactagaagt cctactaaaa attcatttgc accctggagt
     9721 tcaagagcat aaaagctaag cacaggcaaa actataaaaa gtccaaaaaa tcttgttcca
     9781 acgataaaag ataggggtaa gacattattt agcattattt ggtttcctaa aaatcttaaa
     9841 ttttacaaaa aaagataatt ttactatgaa ttatattaag gattgttaag ttttttattt
     9901 tatcttttta aaaggcttaa aaaagtaaga ttttaatttt ttaaaaggat gggtttatga
     9961 atcgttttca aactttttct ttggcaatgg aaggtaaagt aaatatagag ctgctggcag
    10021 cttataaaga taaaattgaa actttaagcg atgaaacatt gtttcgtttt tgttatttag
    10081 aattgaaaaa tcctattata gggcttattt taggcgtagt acctgctttt attttatcag
    10141 ggcttacttt tgatcgtttt tataaagggg atatggggct tggttttgca aaaatggcaa
    10201 tgtgggcttt tatttttata ggtttactta ttgcaggttt ttttgattca tcttctatgc
    10261 ttgtagtatg gatttttaat atcgtcgctc tttttatatg gaatatactt gattttttct
    10321 tagtttggca agggattaaa aatgataatt tagcgaaaat aattcaattt ttggagcaag
    10381 ataatgaaaa ttttattagc aacaagcaat aaacacaaag ttatagaatt aaaagaactt
    10441 ttaaaagaat ttgaaattta tgcctttgat gaaattctaa ccacctttga aatagaagaa
    10501 aatggcaata gttttaaaga aaatgctctt ataaaagcaa gagcggtttt taatgctttg
    10561 gatgaaaatc aaaaaaatga atttattgtt ttaagcgatg atagcggaat ttgtgtcgat
    10621 gttttgggcg gtaagccagg aatttattct gcgcgtttta gtggtaaggg agatgataaa
    10681 agcaatcgtg atgagcttgt aaaacaaatg agagttttgg gctttgaaaa aagtaaggtt
    10741 cattatgtag ctgctatcgc tttggtaagc ttagagggtg aatggacaat gcatggaact
    10801 atgcacggac atgtaattaa cacagaaaga ggtgaaaatg gctttggcta tgatagcctt
    10861 tttatcccta aaggctttga taaaacttta gcagaactta gccataatga aaaaaaccaa
    10921 ctttcgcatc gttttaaagc tttggaactt acaaggattg ttttaaaagt tttaaataaa
    10981 ggaaaagggt gagaaatttt atcaagtata ttttagtggt tgtatttatt tatgtgcttt
    11041 atgcgggttt aaagctttgg ttttcttagt ataaattgta accaaaagac ttggaagcaa
    11101 aaataagctt ccacttaaaa gtaaaatcat cacaaataca gttaaaactc caaaataaat
    11161 cgtaggaata aaattactac tcatcataac gctaaaacct aaaactatac caatggttgt
    11221 ataataaagt gccgatccta tgctaagatg tgaagctaaa atcgcttctt ctacgctttt
    11281 ggtttttatt tcttctttaa aacgatagat ataatgtatg gtatcatcca cgcctatacc
    11341 tatggctata gcagctatgg taatactcat catatctaaa ggtatgccta aaattcccat
    11401 aagggcaaaa accatactta aaggaatgat attaaccagt agggcaataa ttgaaaattt
    11461 caagcttcta aaaataatga taaacaatac aaagataact aagataacaa aaacaagtgt
    11521 atcaaattgt gatgaaaaaa gactttgaag catattatta taaagtagca taatgcctgt
    11581 gatttgaatt tccacaccat cattttttaa aagtgtttcg agctcttgct tgagatttgt
    11641 tagaaattca ttacgcctta gttttggatc agaatctata atgcgtatgc taaatcttaa
    11701 ctcattttct tctatattaa caaagggtga aagaagttct tgcttaagtt ctgggggtaa
    11761 attttcgttt aaaaacgcaa gagtaaaatc atctaaatcc ttgccatcat tgatattttt
    11821 tcctagactt aaaaggctat taagacttaa aaccgaacct atgaattctt tattttctaa
    11881 aaattcatgc accttttttg caatacgcgt tttttgagaa ttgaaccaat aagtatcctt
    11941 tgttgctaga gcatcaaatt cgctttcaaa gctatcaaat acatcattta aactagggtt
    12001 gtttttatta tcaggaaaac gaatgataat atccaaaggc agggttccgc ctaaattttt
    12061 atcaataacc aataagcctt ttttgatttc acttccatct ttaaaataat ttacaaaaga
    12121 attttcaact cttagtttag aaattcctat tagagccaag ataatagtag taatagagag
    12181 tatgtatata atagagcgtt ttttaggatc taggcttgtt ttagcacaaa aagctaagaa
    12241 attaaattta aattcttttt tgtagtattt tttgagttta agaagcacta aaatacttgc
    12301 taaaaataaa tagctaaaaa taagtgcaag tcctatacct atactcatca taataccaag
    12361 ttttatgata ggctctatat ttgaaagcat gagggagaaa aagcctatca tggttgtaat
    12421 gatggcataa aaactaggat ttgcttttgc aagtagggtt tgaagtacaa ggcgttcgat
    12481 tttagctttt ggataaagct tgctaatttc tataaaatgt gtgatgaggt gaatgactac
    12541 gcttagagtg atgattaaga ccaaagcaac atagtttgaa gaaataaccg tgatttgaaa
    12601 atttaaaaga gcaaaaacgc cacttgccgc acttaaactt ataaaacaaa taaagagagg
    12661 taaaaataca aaacgccacg cacgaaaaaa gcaataaagt gcacatgcta ataaaaacac
    12721 aagagaaatt ccatagagca tgagatcaga ttttatataa gttatcatat catcagcaat
    12781 catactcacc ccgccaagat agaatctatc ctcatttttt tcatattttt tgatgatatt
    12841 tttgattgta tctaagcctt gttttgtaat gattttttgt tgttcttggt gttttttaat
    12901 tgctaagcga atttgctctt ttttattctc atctgtgcta agatcgcgtt tttctatgag
    12961 ttcattatag attgtatcgg gtttaagata gatgataagt cctgttgttt tgccatcttt
    13021 tgaaatgata ttgtttttat aaaaaggact gtttaaaatt tcattttgag ctttggtgag
    13081 gttaatatcc ttgctttgta tattgggaat attttttaaa agttctttta agtctgtatt
    13141 ttctgaactt tggagcaaag gagcattgat aatgctaaaa acacgctcga ctaatgaaac
    13201 ttgttctaat tcttgatgaa gctcttttaa tttgtttaaa tttttacctg aaaaagggtt
    13261 ttcatcttca ggtttaaaag ctaaaagtaa aaaattatca cttttataat gtttagaaag
    13321 ttctctaaaa atttttaaat ctttatcatc ctctaaaagc aagctttcag cacttgcatc
    13381 tacgcttaat ttagaagcga aaaagcttaa aaataagcat ataaaaagag tagcaaaaaa
    13441 agtacttttt ggatgataaa taaaaatttt taagaatttc gcaaacatta ttctatggtt
    13501 atattctcaa gtttctgaag tagagtatca aaatcttggt ttgctaaaat atccccaaat
    13561 tgagatctat aggtttgaac tatactaaca cccaaaacat cgatatcgta gataagccaa
    13621 tcattattat tgttataaaa tttaaagatg atattttttt cttccccatc tactatcatc
    13681 gaagaggtta aaaaatatcg ttttgcgttt tttaattctc cattttttac cattaaaact
    13741 tgatccttat aaagatcgag tttatctgta aagctttttt taaggcttgc ctcaaaagca
    13801 ctagcaaatt tttcttgttc tttagggttt aatttagcat aatctttaga aaggctcagt
    13861 tgagccatga gtttataatc aattatatga tcaaaaatta gaaaaattcc atcagcagct
    13921 tgttttttat cttctttgtt gttttgtaga agttgtaggc ttttattgat atttttttgc
    13981 atggtattag aaatttcatc taattgtaag gcaaaaatat ttaaagataa agctagaatt
    14041 aaaaatattt ttttcatttt tttcctttat ttactaagtt cattgcgtct ttgctcgtaa
    14101 gcatcgcgta taaacggata taagttagga gtgttataat aaatctcatc aatctcatca
    14161 agtctaaagc taagttcatt tccaaagcca taggcgctta tggctatgct tgcccaagtg
    14221 ggatcgatat aagctgttgg gcttgcatac caagttgcag gtagggttaa tgtatctctt
    14281 aaattgctag gtccaagtat gggcaaaacg atatgaaaac cgcttcccac tccccaatgc
    14341 gctaaaacag ttcctaaatc agcagggtgt tttttaagtc ccattttact tgcaggatcc
    14401 ataatcccac caaaacccat aatggtatta gcactaaatc ttttaaattc ttctcctgct
    14461 tcttcaaatt taaattgcaa gacattgcct acaaagcgta ggggtgcaaa taaattatca
    14521 aaaaaatttc ttacgcccgt gcgaataaat tcaggagtga tagcattgta gcctttaaga
    14581 ataggacgaa ggctataatc atacaaagct acattaaagc ttgtcattgc tttattgtac
    14641 ccataaagtg ggtcatttac tttatagctt tgatactctt cttcaaaatc atttaaatca
    14701 agctcatttg caaaagcaaa gattgtgcta aagagtaaaa tacaggatat taattttaat
    14761 ttcaaataaa actcctaaga ttaaaagccg ttattatagc agattctaat caatatgaat
    14821 atcccagtaa aattcaaccc attctttagc ttcttttacc ttaaattcgg gttctaaaag
    14881 tgcagttttt ttataaaaaa tcgtagcaac tttaagttct atatgtggaa atttttcaag
    14941 taaaaccttt ttaatttcag ccaaactttc cccactatct acaatatcat caatgagtag
    15001 aatttttttg tacttgctaa gatcaggaat attaaaaatc tcaatagtat caagtttttt
    15061 tgtatcatca tagtggatag aatttagagc aaaaagcttg cgtgtttgaa gagcaactgc
    15121 taaagaatgt cctaaactca ttcctcctct tgctatggct aaaagtgcat caggattaaa
    15181 atcttctttg atttctttag ccaaaatttt tacatcttct ttaaattctt cataagaata
    15241 aaaaatcatt tttgtcccct ttttttattg caaagcaatg agtaagaaat ttcctaagga
    15301 aattaagctt aaaactataa taccaagatt aatcttatcc cattctctct taaaaattcg
    15361 aaccaataaa taagaaagaa aaccaaaggc aaaacctgtg gtaatcgaat aagtaaaagg
    15421 catcataatg atagtaaaaa agctagctac tgcaatagca ctgtctttaa agtctatatt
    15481 tttaacttcc ataaacatta aaattcctac cattacaagt acaggatata tagcatttgc
    15541 gggaatagct ttaaaaagtg ggagcaaaaa aagtgtgaaa gcaaagcaaa tagccacaac
    15601 taaagcggta agtcctgttc tacctccact ttcaacccct gttgtacttt ctacaaaagc
    15661 agttacagtc gaagttccgc ctagtgcacc tagagctgaa cctgtagcat ctgccataag
    15721 ggttttacct agttttttct ctccatcttt tgcatcatca aaaattttac ccctctcgcc
    15781 tatacccgtg atagtgccta tgctatcaaa aagttgagtg ataaaaaaag taaggataat
    15841 aggtatcata gtgatattta aagcactttt gatatcaagt tctaaaaaaa tagctcctaa
    15901 gccattgtca ctactaaaat taggtaaaga aaggatttgc ttaggaaaac ttgcattatc
    15961 aatcccaaaa atccaagcta taatagagct tattaaaact cctaaaataa aagcccctct
    16021 tagttttata gcccaaaaaa atacaattaa aatgagggta aaaattccaa aaagcacatg
    16081 gggattttta aaatttccta tgctgactaa agtatcttta tttggcgtta taatgcccat
    16141 ttgacttaag cctaaaaaag cgataaagca tccaatccct gcgcaaatgg ctaagcgcaa
    16201 atctttaggt atattgcgta taacccaaag gcgaaaggag gtaaaagaaa ggattagaaa
    16261 aataatactt gagataaaga ctgcccctaa ggcactttgc catggtattt tttgtcctaa
    16321 gcaaactgca aaagtaaaat aagcattcaa acccattcca acactcatgg ctactggagt
    16381 attagcaaaa aaggcattaa aagcagttgc aacaatagta attaaagcag ttgcagtaat
    16441 taaagcttct atcggcatgc ctgtattgcc tactatgctt gaatttacag gaatgatata
    16501 aaccatggct aaaaaagttg ttaatcctgc tacaacttcg gttcgaacat tggtaccatt
    16561 ttctttgagt ttaaaaaaat ccatttttta atccttagta ggtttgtagt tcattatata
    16621 aactatcgcg ttctacagga gttaaatttg ctgtttttat catttcgata aaggttttta
    16681 ggttagtacc cttagcagat tttgctcctc ctgcactttg tatactttct ttttctatag
    16741 tgccatctaa gtcatttgca ccaaattctt gcgcaaccat ggctaaattt aaagtcatag
    16801 tcgcccaata agctttaatg tttttgatat tatcaagtac taagcgagaa atagctatgg
    16861 tttttaaaat ttcttcacta tccattatct tatctgtttg tatatagcta ttatctcttt
    16921 gccaaaccaa aggaataaat gcgttaaaac ctccactttc atcttgcaaa gcacgaagtc
    16981 ttaacatatg gtctatccta tggtgtcttt cttcgatatg tccaaaaagc atagtagcat
    17041 tgctttgtct gcctttatca tgccaaagtt tgtgaatttt gagccaattt tcgctgctta
    17101 cttttccatg gcagattttt ttgcgtattt cttcatcaaa aatttctgct ccacccccag
    17161 gcatagaatc cacgccgtat tcaagcattt tttctatcac ttcttcatag ctcattttaa
    17221 aacggcgatg caaaaagtca atttctgctg ctgtcatggc ttttatatgc atttgggggt
    17281 atttttcttt aatcatttta aaaatttcta aataccactg ccaacttgtg tctttattgt
    17341 gtgctgaaac aatatgcact tctttagtgc cacgagtgat agtatcgtca actattttca
    17401 taatttcttc atggctcata agataaggat ttggattttt tcggtgcgct gaaaaagcac
    17461 aaaatttaca tgtatctgcg caaatatttg taggatttat atggcgattt atattaaaat
    17521 acaccttttt tccatgaaac ttagtgcgtt ttttgtgtgc gaatttagct aaggtaaaaa
    17581 gatctaaatc ccatagagca tttgcttcat tttcatttaa tctttcttca ttttctagtt
    17641 tttcaagtag atttttcatt gattttcact tctataaatt tttagaattt ttgaaaaaac
    17701 attataaatt ttgcttactg aaaaagag
//
LOCUS       DAQUWA010000037        17645 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.037, whole genome shotgun sequence.
ACCESSION   DAQUWA010000037 DAQUWA010000000
VERSION     DAQUWA010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17645
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.037"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            75..371
                     /locus_tag="R8X70_001083"
     CDS             75..371
                     /locus_tag="R8X70_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2928867.1"
                     /translation="MFDFFKPKVKAIKFPKEEILPRYYKMRAWSLSGVFIGYMGYYLV
                     RNNITLSTPFIQNQLELSKSDIGTITGSMLIAYGISKGAMSVLSDKADPKNTWL"
     gene            362..565
                     /locus_tag="R8X70_001084"
     CDS             362..565
                     /locus_tag="R8X70_001084"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928868.1"
                     /translation="MALGLILCALVNVLLGFSNSFYAYVGFVIALGVFQGMGVGPSFI
                     TLANWYPKKSGEFIQLFGISRTI"
     gene            715..882
                     /locus_tag="R8X70_001085"
     CDS             715..882
                     /locus_tag="R8X70_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate transporter"
                     /protein_id="HEF2928869.1"
                     /translation="MLYAVKGSPKNEGLVDITEINEMRGIKTEEIKAIETPNLSSFEI
                     FYHYVLKNKNA"
     gene            1225..1455
                     /locus_tag="R8X70_001086"
     CDS             1225..1455
                     /locus_tag="R8X70_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002927106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928870.1"
                     /translation="MEVVPAFAVGSCVGFRGFMSYVVGASLGTKAIGWAVDYYGSWNA
                     GLIMLLSACILCILCSILCHFGAKKKEDICKK"
     gene            1443..2219
                     /gene="cdtA"
                     /locus_tag="R8X70_001087"
     CDS             1443..2219
                     /gene="cdtA"
                     /locus_tag="R8X70_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cc-CdtA"
                     /protein_id="HEF2928871.1"
                     /translation="MQKIKLSLMFLIVTIIFSACSSKEQQINPLGRSYGKFNDNDPLK
                     LGSKPTPPVKQKTPSLVEGKKFPAIPLVPPVITPNTFKGDNAVKGPLPRLKSPNEFAS
                     NALYENTGMVSDFVTIMNPSGASLTIWALNPGNWIWGYSLFASRPFGDARAWQLIEFP
                     NNTVMIKNAKTFTCLNAYRNGIVHYPCDQTNFAQFWRLYPMTNGAYQIQNFATQQCIQ
                     TPVSNVMEEFNLSFYNIYLTDCLKEKEKNLDRQWYIGAPI"
     gene            2244..3047
                     /gene="cdtB"
                     /locus_tag="R8X70_001088"
     CDS             2244..3047
                     /gene="cdtB"
                     /locus_tag="R8X70_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cc-CdtB"
                     /protein_id="HEF2928872.1"
                     /translation="MKKIVFLILSFNVLFAALENYNTGTWNLQGSSAATESKWNVSIR
                     QLITGANPMDVLAVQEAGVLPSTAMMTPRQVQPVGVGIPIHEYIWNLGSASRPSSVYI
                     YYSRVDVGANRVNLAIVSRVQADEVFVLPPPTVASRPIIGIRIGNDAFFNIHALASGG
                     NDAGAIVAAVDMFFRNRPDINWMILGDFNRESGALVTLLDPDLRARTRVVVPPSSTQK
                     SGRTIDYAITGNSNTAALYNPPPIVAILALAGLRTFLASDHFPVNFRRP"
     gene            3057..3628
                     /gene="cdtC"
                     /locus_tag="R8X70_001089"
                     /pseudo
     CDS             3057..3628
                     /gene="cdtC"
                     /locus_tag="R8X70_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782075.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cc-CdtC"
     gene            complement(3682..4557)
                     /gene="zupT"
                     /locus_tag="R8X70_001090"
     CDS             complement(3682..4557)
                     /gene="zupT"
                     /locus_tag="R8X70_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEF2928873.1"
                     /translation="MEFTLEQILVAMALTILAGLSTAIGSVIAFFSRNDNLRILSFGL
                     GFSAGVMIYISFMEILPSAFTDFKKYYNSNYGELLALLCFFGGIFLSAIIDKFIPEDV
                     NPHDPKEDLSELKICPLPQKNEKAPAFHAGEPLKKINVKALKRTGIFTALAIAIHNFP
                     EGFATFISSLDNLSFGVAIAVAVAIHNIPEGMAVSLPIYHATKDKKKAFIYSALSGVA
                     EPMGAIVGAFLILPIMNELTLAITFAVVAGIMVFISFDELLPAAKTYDKAHDSLYGLV
                     LGMAVMAVSLILLNP"
     gene            4705..5796
                     /locus_tag="R8X70_001091"
     CDS             4705..5796
                     /locus_tag="R8X70_001091"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEF2928874.1"
                     /translation="MKNLLVCALEPSANLHLKEVLKAYKEEFGEFKLDGIYDENLCKE
                     FALNSTPLYSSHEFSAMGFVEILPLIFKAKKVIKELVNLTLNQTIDAVLCIDSPAFNI
                     PFAKALKKANSKTKRIYYILPQVWAWKKGRIPIIESHFDVLASILPFDEQFFSKSIYV
                     GHPLLDEIKDFKNENDIKILLSKNESEKTIAFLPGSRRSEIKRLMPVFRELSRKFEGE
                     KILCVPPFNLERLEIYGDVKDFKIQSNTPQVLKKADFAFICSGTATLEAALVGTPFVL
                     AYKAKTIDIFIARLFVKLKHIGLANIFCDFAGKEALNPEFLQDEVNVLNLYEAYNKYD
                     YKAFFDKVHFLKEYLKFGSAKNLAKILNQ"
     gene            5814..6299
                     /gene="greA"
                     /locus_tag="R8X70_001092"
     CDS             5814..6299
                     /gene="greA"
                     /locus_tag="R8X70_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEF2928875.1"
                     /translation="MQKEPMSQFGYDKLSAELKDLKDNQRPAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLIARAQIIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGNLDKGYISIASPIAKAMLGKKEGDEFKVCLPKGESEFEIISINYEPLK
                     F"
     gene            6432..7067
                     /locus_tag="R8X70_001093"
     CDS             6432..7067
                     /locus_tag="R8X70_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEF2928876.1"
                     /translation="MGDIFDLLIGEISATHEFAKPYIKLLEELALKMEIIYLEGNHDF
                     NLARFFQRVKIFNLQEQPLKLNLHTSKGKNTDFKNSFITLAHGDIFLSPPLQFALKSL
                     RNHYLLVFLNFLNQISFNSISNKILKNQNKKNLFYKIENFKNLAKERYKKYENLGFWV
                     CEGHYHQNLILDEKDVKYFNLASFAYERSFFVVECCQEIKFREQKLRGQNV"
     gene            7060..8016
                     /locus_tag="R8X70_001094"
     CDS             7060..8016
                     /locus_tag="R8X70_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HEF2928877.1"
                     /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREI
                     IKIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNI
                     LIGFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVV
                     EDLGIYSPKTDIDFSKIEKFSGSALILDDSMTARKRVKEMMQQMGFQVIEAKDGVEGL
                     NKLEELSQVYGENLSSVLKIIVSDVEMPQMDGFHFAARIKEDARFKDIPIVFNSSLSN
                     EFMNEKGVHEAGGESYLVKFNASDFFNEIAKVIKKHQSQEQG"
     gene            8020..10314
                     /locus_tag="R8X70_001095"
     CDS             8020..10314
                     /locus_tag="R8X70_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEF2928878.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELETNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICARLTAISEGESPNGVENETPVEAPQKEEPAPTPEPEVDV
                     NQLSDSEVEAEIERLLKARKAEDQARRAQKKQNTAASTTSKPAASTPKAENMEKKVPA
                     SGGGGGGMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFLEELNQ
                     VVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGEETELD
                     KSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVVEITDD
                     GKGLDANSLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGRGVGMD
                     VVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLASVLET
                     VRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVAESKLG
                     IIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKEIKVDI
                     KAQIESSAKKPKEKPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEALNIIK
                     SGDHDIDAILIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGM
                     TEYITKPYSPEYLENVVRKNLKLG"
     gene            10319..10840
                     /locus_tag="R8X70_001096"
     CDS             10319..10840
                     /locus_tag="R8X70_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HEF2928879.1"
                     /translation="MSNEKLEQILQKQQTQIAGPVGDQKEDDIIQLVGFVVGDEEYAI
                     PILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFNLGSSKMTPQTRYI
                     VLRGESNGSGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENIL
                     TILKVEALLKREF"
     gene            10840..11463
                     /gene="serB"
                     /locus_tag="R8X70_001097"
     CDS             10840..11463
                     /gene="serB"
                     /locus_tag="R8X70_001097"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEF2928880.1"
                     /translation="MIKLCVFDFDSTLMDGETIDILAKAYDKEKEVVDITHRAMAGEL
                     DFFESLQERVSFLKGMPYDLVLKIGQDLPLMNGAYELIEFLNSKNIFVVIFSGGFHEG
                     IDPAMKKLKVNLGFANYLHHKNNTLSGLVGGEMMFSNSKGLMLQRLKNFLNLQTHEVM
                     CVGDGANDIAMFNESGLKVAFCAKEILRSKADICVDNKDLKEIIKVI"
     gene            11465..12451
                     /locus_tag="R8X70_001098"
     CDS             11465..12451
                     /locus_tag="R8X70_001098"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEF2928881.1"
                     /translation="MKKFSLWCDFIENSFLDDDFLNLLSRGVNGATSNPAIFKNAILN
                     SPIYKEKIAKLKGKKAKEIYEELAIADIQKAADKLAPLYHTGNDGFISLEIDPRFYDN
                     TSLSLGEAKKLYSAIGKDNVMIKVPATNASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNAGLIEFRKNNIALQGKNTHLRTPQAVISIFVSRFDRLLNSKAKEQNRIGILNA
                     NLAYNNIISKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSINTAPLDAINAFKTE
                     IEFKKPLMNFEIYTQLNAIISQNEREKACDELLKDGLEQFCIAFEEILQALN"
     gene            complement(12448..12870)
                     /locus_tag="R8X70_001099"
     CDS             complement(12448..12870)
                     /locus_tag="R8X70_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HEF2928882.1"
                     /translation="MIYLAQTDTTAGFLSKNLEEINALKGRAKDQPCLITSAKFDELK
                     KIVRVPNQFKNWVRRAKKTTFIYPNNQAVRIVKDCKHAQFLEKMGCFYSSSANKHGQK
                     FDELWARSVADVVVDEIFVENTPSKIIKLHRKKLKKIR"
     gene            complement(12870..13391)
                     /locus_tag="R8X70_001100"
     CDS             complement(12870..13391)
                     /locus_tag="R8X70_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928883.1"
                     /translation="MITGGSGGSNTRTGLVFEGQVDLATFLSQQNGYTLNEKQEVFFN
                     NEKVARIFKKYKLYEFLEELKINWKECISKKLLPDDSIYVIINNTLHIIECKFQSVAG
                     SVDEKLQTCDFKKKQYQKLFSRANIEVEYIYLLNDWFRKPEYKDVLDYIISVRCQYYF
                     EYIPLQKLGLPVP"
     gene            complement(13388..14239)
                     /locus_tag="R8X70_001101"
     CDS             complement(13388..14239)
                     /locus_tag="R8X70_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEF2928884.1"
                     /translation="MNLKEKPIFISKDKNFTLYQNDCNKLLPKFEKQFDLIFADPPYF
                     LSNDGLSIQNGKIVSVNKGNWDKGDDIEKIDKFNLKWLSNAKIALKDTGSILISGTYH
                     NVFSLGRILQKLDFKILNIITWQKTNPPPNFSCRYLTHSTEQIIWARKSYKHKHIFNY
                     EILKLLNSNKQMRDVWAFNAIAPWEKTNGKHPTQKPLALLTRLILMASDESSLICDPF
                     SGSSTTGIAANLLNRQFIGFEKENEFINISIARKKELENNFNTIKNKINDLKLLNKNS
                     LFQGGYL"
     gene            complement(14236..17502)
                     /gene="carB"
                     /locus_tag="R8X70_001102"
     CDS             complement(14236..17502)
                     /gene="carB"
                     /locus_tag="R8X70_001102"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEF2928885.1"
                     /translation="MPKRTDIKNILLIGSGPIVIGQACEFDYSGTQAAKTLKEQGYRV
                     VLINSNPATIMTDPEFADATYIEPVTRESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIDMDLPKSMYAYNYDEALKAVDEI
                     GFPLMIRASYTLGGAGSGVVYNMDEFKELANAALALSPIHEILIEESLLGWKEYEMEV
                     IRDKNDNCIIVCSIENLDPMGVHTGDSITVAPALTLTDKEYQVMRNASFAILREIGVD
                     TGGSNVQFAVNPTNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAIGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERNLSGFDRVKFEDKNDLIFKIRNANEKRLLYVAQAFREGFDVKELYELCKI
                     DPWFLSQIKEIVDFEEQIDMDILHNKTLLRKAKTMGFSDKMIALLVNLKDNLELSQND
                     IYYARMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNEARDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDLGVKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRGVIEREKPDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDMAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASEIGYPVLVRPSYVLGGRAMRVVTDESELRLYMQ
                     EAVDVSDKSPVLIDQYLDNATEIDVDAISDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEQIVQKTADIALNLGVVGLLNIQFAIYNNELYMIEVNPRASRTVPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDAFGVVNFDNAILRPKPSKYISVKEAVFPFSK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQISSFNHLPESGVVFISLKEKDKKYA
                     KKLASEYSKLGFKLMATSGTCKEIVETGFECELVHKISEGRPNVEDKLKNGEIQLVIN
                     TSDSHTFAGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQNQSYLEVKSLQEWLK
                     "
BASE COUNT         5982 a         2867 c         3022 g         5774 t
ORIGIN      
        1 tttaattata tttttattta atatttatta atatatttac ataataaatt acaaaaaagg
       61 gaggcggagc atgcatgttt gattttttta aaccaaaagt aaaagctata aaatttccta
      121 aagaagaaat tttacccaga tactacaaga tgagagcttg gagtttaagt ggagttttta
      181 taggatatat gggatattat cttgtacgaa acaatatcac tctttcaact ccatttatac
      241 aaaatcaact cgaacttagc aagtcagata tcgggacaat cacaggttcc atgcttatag
      301 cctatggaat tagcaaaggc gcaatgagcg tacttagtga taaagctgat cctaaaaata
      361 catggcttta ggtcttattt tatgtgctct tgtaaatgtt ttacttggtt tttcaaattc
      421 tttttacgct tatgtaggtt ttgttatcgc gcttggggtt tttcaaggta tgggggtagg
      481 tccttctttt atcactcttg caaactggta tcctaaaaag agcggggaat ttatacagct
      541 atttggaata tctcgcacaa tttaggagga ggtataatcg ctcctatagt gtcgctttct
      601 ggatttgctt tagcagcatt tttaggcgta agcttggcag attttaatga aacacattag
      661 catatcaatc atttttatgt tcctgctttt tgtgctgtgc ttattagcct ttatgtgctt
      721 tatgcagtca aaggaagtcc taaaaatgaa ggtttggttg atattactga aatcaatgaa
      781 atgcgaggga ttaaaacaga agaaatcaaa gctatagaaa ctccaaattt aagcagtttt
      841 gaaatttttt atcattatgt acttaaaaac aaaaatgctt agtatgtggc ttggatggat
      901 acttttgttt atatggtgcg ttttaggctt atttcttggc ttcctattta cttgctagaa
      961 acaaaaggct ttaataaaga acaaatgggt attgcctttt ggctttttga ataggctgct
     1021 ataccttcta ctttacttgc aggatatatt tcagataaaa tttttaaagg ctatagaatg
     1081 cctcctgcta taggtgctat ggtgattatt ttctttatga ttattggata ttttacttca
     1141 aataatcttt atatggttat tttctttgca gctatggcgg ggtgtttagt ctatatacca
     1201 caatttttag caagtgtgca aactatggaa gtcgttcctg cttttgcagt aggatcttgt
     1261 gtaggatttc gtggctttat gagttatgta gtcggcgctt cacttggaac aaaagctata
     1321 ggctgggctg tggattacta tggtagttgg aatgctggtc ttatcatgct ccttagtgct
     1381 tgtatacttt gtatactttg ctctatcttg tgtcattttg gtgctaagaa aaaagaggat
     1441 atatgcaaaa aataaaatta agcctaatgt ttttgattgt aacaatcatt ttttcagctt
     1501 gttcttcaaa agaacaacaa atcaatcctt taggaagatc ttatggtaaa tttaacgata
     1561 acgatccttt aaaacttggt tcaaaaccta caccccctgt caaacaaaaa acaccaagct
     1621 tggtagaagg taaaaaattt cccgccatac cacttgtccc acctgtaatc actcctaata
     1681 cctttaaagg agataatgcc gtcaaaggtc cattgccaag gctaaaatct ccaaacgaat
     1741 ttgcttcaaa tgctttatac gaaaacacag gtatggtaag tgattttgtc actattatga
     1801 atcccagtgg agcatcttta acaatctggg ctttaaatcc tggcaattgg atatggggat
     1861 atagtttatt tgctagtaga ccttttggag atgcaagagc ttggcagctt attgaatttc
     1921 caaacaatac agtaatgatt aaaaatgcaa aaacatttac ttgcttaaac gcctatagaa
     1981 atggcatcgt tcattatcct tgcgatcaaa caaattttgc gcagttttgg agactttatc
     2041 cgatgactaa tggagcttat caaattcaaa attttgccac ccaacaatgt atacaaacac
     2101 ctgtttcaaa tgtaatggaa gaatttaatt tgagctttta taatatttat ttaaccgatt
     2161 gtttgaaaga aaaagaaaag aatttggata gacagtggta tataggcgct cctatttaat
     2221 tttttcgcta tgaaaggaag ataatgaaaa aaatagtatt tttgatttta agttttaatg
     2281 tattatttgc cgctttagaa aattacaaca ccggaacttg gaatttgcaa ggctcatcag
     2341 ctgcaactga aagcaaatgg aatgttagta taagacaact cataaccggt gcaaatccta
     2401 tggatgtttt agctgttcaa gaagcggggg ttttacctag tacagctatg atgactccta
     2461 gacaggtaca acccgtgggc gtgggtattc ctatacatga atacatatgg aatttaggct
     2521 ctgcatcaag acctagctct gtttatatat attattctag agtggatgta ggagcaaatc
     2581 gtgtgaattt agctatcgtt agcagagtgc aagcggatga agtttttgtt ttaccccctc
     2641 caacagttgc ttcaagacct attataggca tacgcatagg caatgatgct tttttcaata
     2701 tacacgctct agcaagtggg ggaaatgacg caggagccat tgtcgctgct gtggatatgt
     2761 tttttagaaa tagacctgat attaattgga tgattttagg cgattttaat agagaatcag
     2821 gcgccttagt aaccttgcta gatcctgact taagagcgcg cactcgcgta gttgttccgc
     2881 cttcttctac gcaaaaaagt ggaagaacga ttgattatgc tatcactgga aattccaaca
     2941 ctgcagcttt atacaaccca ccaccgatag ttgcgatttt agctttagca ggattaagaa
     3001 cctttttggc ttcagatcat tttcctgtaa attttagaag accttaggag cttaatatga
     3061 aaaaattttt tattttattt tttgcccttt tgagcttttt gaaagcagag cctagcttgg
     3121 atgaattggc agactttact cctatgtttg ctataagatc tttagaaaca ggaatttctt
     3181 taagtccttt tagaaaaact tcaaaaaggt tagaagatca aaattggttt ttaaaagaga
     3241 ttgtagcaaa tgatgagcta aaagctaggg atatgcacgc aaaagatttg ccttttggct
     3301 atgttcagtt tataagccct aggggcgatg atatatgcct agctgtttta agtgaaaaaa
     3361 gttttggcac caaatcttgc aaacaagatt tgcaagatgg aacaatgcag actatttttc
     3421 tatcatacca atgacaaatg gttctataca aattagatct ttaaccaatg gtggcaatca
     3481 atgcatgagc acttttcctg actctagtat cgccatagaa aatcgctttg gtttaggaga
     3541 atgccttttg gatcgttcta tcgtaactgt attaagcaaa cttttctttt tctcccctgc
     3601 tataatcgaa gcaagcgcaa tttactaaca cttttctaac aaaaccaagc tttcatggct
     3661 tggtttataa cttgatttaa ctcaaggatt taacaaaatc aaactcaccg ccattaccgc
     3721 cattcctaaa acaagtccat aaaggctatc gtgggcttta tcataagtct ttgccgcagg
     3781 caataactca tcaaaagaga taaacaccat gatcccagcc actacagcaa aggtgatggc
     3841 taaagtaagc tcattcatga taggcaagat caaaaacgct cccacaatcg ctcccatagg
     3901 ctcggctaca cccgaaagtg cagagtaaat aaaggctttt ttcttatcct ttgtagcatg
     3961 ataaatcggt aaagaaactg ccattccttc agggatattg tgtatagcta cagccacagc
     4021 gatagccaca ccaaagctaa gattatcaag gcttgagata aaagtcgcaa aaccctcagg
     4081 aaaattatgt atcgctatgg caagtgcagt aaatatccct gttcttttca atgcctttac
     4141 attgatcttt tttaaaggtt cgcctgcatg aaaagcgggt gctttttcat ttttttgagg
     4201 caaggggcaa attttaagct cacttagatc ttctttagga tcgtgagggt tgacatcttc
     4261 tgggataaat ttatcgatga tggctgataa aaaaattcca ccgaaaaaac acaaaagtgc
     4321 taaaagttct ccatagtttg aattatagta ttttttaaaa tctgtaaaag cagaaggtaa
     4381 aatttccata aaagagatat atatcatcac tccagcagaa aaaccaaggc caaaagaaag
     4441 aattctaaga ttgtcatttc tgctaaaaaa tgctatcaca gaaccaatag cggttgaaag
     4501 tccggcaagg atggtcaaag ccatcgctac taaaatttgt tctaatgtaa attccataaa
     4561 aagcattata gcaaaaatca gtaaataaat tttatttaat aataattttt attaattatt
     4621 attaaactta aaacaataaa aactaacaaa tgctaagaaa aatttagata ttattttact
     4681 ttaaaaattg tatagagagt gaaaatgaaa aatcttttag tatgtgcctt agaaccttcg
     4741 gcaaacctac atttaaaaga agttttaaaa gcttataaag aagaatttgg cgaatttaaa
     4801 cttgatggaa tttatgatga aaatttatgc aaagaatttg ccctaaattc tacgccactt
     4861 tatagctcgc atgaatttag tgccatgggt tttgtagaaa ttttaccttt gatttttaaa
     4921 gcaaaaaaag taattaaaga attggtaaat ttgactttaa atcaaacaat agacgcggtt
     4981 ttatgtattg actctcccgc ttttaatatc ccttttgcta aagctttaaa aaaagcaaat
     5041 tcaaaaacaa aaagaattta ttatatcttg cctcaagttt gggcttggaa aaaagggcgc
     5101 attcctatta tagaaagcca ttttgatgtt ttagcctcta tcttgccttt tgatgagcaa
     5161 ttttttagta aaagcatata tgtaggacat cctcttttgg atgaaattaa agattttaaa
     5221 aatgaaaacg atattaaaat tttacttagc aaaaacgaaa gtgaaaagac tatagcgttt
     5281 ttaccaggct caagacgcag tgaaatcaag cgtttaatgc ctgtttttag agaattatca
     5341 cgcaaatttg aaggagaaaa aatcctttgt gtgccacctt ttaatctcga aagattagaa
     5401 atttatggcg atgtaaagga ttttaaaata caaagcaata caccccaagt gcttaaaaaa
     5461 gctgattttg cttttatttg tagtggaact gctaccctag aagcagcttt ggtaggaact
     5521 ccttttgtgc ttgcttataa agcaaagact attgatatat ttatcgcaag actttttgta
     5581 aaattaaaac acattgggct tgcaaatatt ttttgtgatt ttgctggaaa agaagcttta
     5641 aatcctgaat ttttacaaga tgaagtcaat gttttaaacc tttatgaagc ttataataaa
     5701 tatgattata aggcattttt tgataaagta cattttctaa aagaatattt aaaatttgga
     5761 agtgcgaaaa atctcgctaa aatattaaat caataataat taaggatata taaatgcaaa
     5821 aagaaccgat gagccaattt ggctatgata aattaagcgc tgaattaaaa gatttaaaag
     5881 ataaccaacg ccctgctgtt gtgatagaaa tcgacaccgc aagaagtcat ggggatttaa
     5941 aagaaaatgc agaataccat gccgcaagag aaaaacaagc cttgatagaa agtcgtatcg
     6001 cagaacttag cgatttaatc gcaagagcac agatcatcga tccttcaagc tatgaacatg
     6061 atagcgttaa atttggatct tctgtggtga ttatggattt agatactgaa aaagaaagca
     6121 aatataccct agtaggtatt tgtgagggaa atttggataa gggttatatt tctattgctt
     6181 cacctattgc aaaggctatg cttggtaaaa aagagggaga tgaatttaaa gtgtgtttac
     6241 caaaaggaga aagcgaattt gaaattatct ctatcaacta tgaaccttta aaattttaag
     6301 gatagaaaat tttactacaa aatggagcga ttttaatcgc agatgctcat gaaaatgata
     6361 aaagaagagg cttttgggaa tttttacaag ctttaaaaag gagtgaaatt accacacctc
     6421 aactcatttt aatgggagat atttttgact tacttatagg tgaaatctct gctacgcatg
     6481 aatttgcgaa accctatatt aaacttcttg aagaacttgc tttaaaaatg gaaattattt
     6541 atcttgaagg aaatcatgat tttaatctcg ctcgtttttt tcaaagggtt aaaattttta
     6601 atctacaaga acaaccctta aaacttaatt tacatacaag taaaggtaaa aataccgatt
     6661 ttaaaaattc ttttatcact ctagctcatg gggatatttt tttatctcca cctttgcaat
     6721 ttgctcttaa aagcttaaga aatcattact tgctagtatt tttaaatttt ttaaatcaaa
     6781 taagtttcaa ttctatctca aataaaattc ttaaaaatca aaataaaaaa aatctttttt
     6841 ataaaattga aaattttaaa aatttagcca aagaaagata taaaaaatat gaaaatttag
     6901 gcttttgggt atgtgaaggg cattatcatc aaaatttaat attagatgaa aaagatgtta
     6961 aatatttcaa cttagctagt tttgcatatg agagaagttt ttttgtagta gaatgctgtc
     7021 aagaaatcaa atttcgagaa cagaaattga ggggtcaaaa tgtttgatga aaatatcgtg
     7081 aaaacgggtt caaatgaaat ggagcttgtc gatttccgta tctttaagca aggacacgat
     7141 aaagtctatg agggaattta tggggtaaat gtctctaagg ttagagaaat tatcaaaatt
     7201 ccaagcctca cagaacttcc tggtgtgcct gattatatcg aaggaatttt cgatcttcga
     7261 ggcgtagtta taccggtagt aaatcttgct aaatggatgc aaatcaccga gccagaaagc
     7321 actatgctaa aacctagagt tattatcact gaatttagta atattcttat aggctttata
     7381 gtacatgaag ctaaaagaat tcgccgtatc aattggaaag atatagaacc agctactttc
     7441 tctacaggtt caggtgcctt agataaagga aaaattacag gtgtcactcg tatagaaaat
     7501 gatgaagttc ttttgatact tgatttggaa agtgttgttg aagatttagg aatttactct
     7561 cctaaaaccg atatagattt tagtaaaatt gaaaaattca gcggatcagc acttatttta
     7621 gatgatagta tgacagctag aaaacgcgtt aaagaaatga tgcaacaaat gggcttccaa
     7681 gtaattgaag ctaaagacgg agttgaaggc ttaaataaac ttgaagaact cagtcaagtt
     7741 tatggagaaa acttaagctc tgtattaaaa attatcgtaa gtgatgttga aatgcctcaa
     7801 atggatggat ttcattttgc tgcacgcatc aaagaagatg caagatttaa agatattcct
     7861 atagtcttta actcatcttt atctaacgaa tttatgaatg aaaaaggtgt tcatgaagcc
     7921 ggtggtgaaa gctatttggt taaatttaat gcaagtgatt tcttcaatga aattgctaaa
     7981 gtcatcaaaa aacaccaatc tcaagaacag gggtaaaata tggaagatat gcaagaaata
     8041 cttgaagact ttttggttga agcttttgag ctagttgagc aaatcgacca tgatttagtg
     8101 gagcttgaaa caaatccaga agacttagaa ttattaaaca gaattttccg tgtagcacac
     8161 actgtaaaag gctcttcaag ctttttaaat tttgatgttt taacaaaatt aacacatcat
     8221 atggaagatg ttttaaacaa agcaagacat ggagaattaa aaatcactcc agatattatg
     8281 gatgttgttt tagaatccat cgatagaatg aaaaccttac ttaactctat acgcgataac
     8341 ggcaatgata cagctatagg aatggatata gaaccaattt gtgcaagatt aacagctata
     8401 tcagaaggag aatctccaaa tggcgttgaa aatgaaactc ctgtagaagc tcctcaaaag
     8461 gaagaaccag ctcctacacc agaacctgaa gtagatgtta atcaattaag cgattctgaa
     8521 gttgaagccg aaatagaaag attactaaag gctaggaaag cagaagatca agcacgtcgt
     8581 gctcagaaaa agcaaaatac tgcagcttct acaacttcta aaccagcagc aagcacacca
     8641 aaagctgaaa atatggagaa aaaagttcct gctagtggag gcggtggagg cggtatggat
     8701 caaaccatac gcgttgaagt aaaaagatta gatcacttaa tgaatctaat tggggagctt
     8761 gttttaggca aaaaccgttt gcttaaaatt tacgatgatg ttgaagagcg ttatgaagga
     8821 gaaaaattcc ttgaagaact taatcaggtt gtaagtcaat taagtattat tacaactgat
     8881 gttcagcttg ctgtgatgaa aacaagaatg caacctatag caaaagtttt caataaattc
     8941 ccaagagttg ttcgtgattt aagtcgtgaa ttaggaaagc aaatagaact tgaaattaca
     9001 ggtgaagaaa ctgaacttga taaatctatc gtagaggaaa ttggcgatcc tatcatgcat
     9061 atgattagaa attcatgtga tcatggtgtt gaggatccag caactcgtgc agcgaatgga
     9121 aaacctgaaa aaggtatagt ccaacttaaa gcttacaatg aaggaaacca tatagttgta
     9181 gaaattaccg atgatggtaa gggacttgat gcaaatagcc taaaagctaa agctatagaa
     9241 aagaatttga ttaccgaaag agaagcagat caaatgacag acaaagaagc ttttgctttg
     9301 attttcaagc ctggtttttc aactgcggct aaagtaacaa atgtttcagg tcgtggcgta
     9361 ggaatggatg ttgttaaaac caacatcgaa aaacttaatg gggtaattga aattgatagt
     9421 gagttaggta aaggaagttc gtttaaactt aaaattcctc ttaccttggc aatcattcaa
     9481 tctttacttg taggaactca agaggaattc tatgcaattc cacttgcaag cgttcttgaa
     9541 acagttagag tgccaattga tgatatttac actattgaag gcaaaaatgt attgcgcctt
     9601 agagatgaag tactttctct tgtaagactt tctgatgtct ttggagttaa acaagtgctt
     9661 gaaagcggtg atcaaactta tgtcgttgtt ataggggtag cagaaagcaa gcttggtatt
     9721 atagtagata ctcttgtagg acaagaagaa atagttatta aatctatggg cgattattta
     9781 caaaacatcc aaggtatagc aggtgctact atccgtggtg acggtagagt aacacttatc
     9841 atagatgtag gcgctatgat ggatatggca aaagaaataa aagttgacat caaagctcag
     9901 attgaatcaa gtgctaaaaa accaaaagaa aaaccaagtg attacaaggt cttaatcgtt
     9961 gatgattcta aaatggatag aactttaatg caaaaagctt tagaaccgct aggagttagt
    10021 cttattgaag ctaccaatgg cgttgaagca ttaaatatta taaaatcggg cgatcatgat
    10081 attgatgcga tattaattga tatcgagatg ccaagaatgg atggttatac cttagcgggt
    10141 gaaattagaa aatattctaa atatcgcaat ttaccgctca ttgcagttac ttcaagaaca
    10201 agtaaaactg accgtttaag aggtgttgaa gtaggtatga cggaatacat taccaaacct
    10261 tattctccag aatatttgga aaatgtggtt agaaaaaatt tgaaactagg ataagaatat
    10321 gagtaatgaa aaattagagc aaatattgca aaaacagcaa actcagatag ctggtcctgt
    10381 tggtgatcaa aaagaagatg atatcataca acttgtaggt tttgtcgtag gagatgagga
    10441 atatgctatt ccaattctta acatacaaga aatcatcaaa cctatagaat atacaagggt
    10501 tccaagcgtt cctgattatg ttttgggtgt atttaatatg cgtggaaatg ttatgccatt
    10561 aattgatttg gcacagcgtt ttaatctagg aagttctaaa atgactcctc aaactcgtta
    10621 tattgtttta agaggcgaat ccaatggaag tggtgttgga ggaaatgcgg gctttgtaat
    10681 agatagacta accgaggcta tcaaaattca tagaaaccgt atcgatccgc cacctgaaac
    10741 tttggtaaaa gataagggta tgatctatgg tataggcaaa agagatgaaa atatccttac
    10801 catacttaaa gttgaagcct tacttaagcg tgaattttaa tgataaaact ttgtgttttt
    10861 gattttgatt ccactttgat ggatggagaa actattgata tattagctaa ggcttacgac
    10921 aaagaaaaag aagtggtgga tatcactcat cgcgctatgg cgggtgaact tgattttttt
    10981 gaaagtctgc aagagcgtgt cagttttcta aagggaatgc cttatgatct tgttcttaaa
    11041 ataggacaag atcttccatt gatgaatgga gcttatgagc ttattgaatt tttaaattct
    11101 aaaaatattt ttgttgttat ttttagtggg ggttttcatg aaggtattga tcctgctatg
    11161 aaaaaactaa aagtaaattt aggctttgca aattatctac atcataaaaa taatacttta
    11221 tcaggactag tgggcggaga aatgatgttt tcaaattcaa agggtttaat gctgcaacgc
    11281 ctcaagaact ttttaaattt gcaaactcat gaagtcatgt gtgtgggcga tggagcaaac
    11341 gatatcgcta tgtttaatga aagcggttta aaagtcgcat tttgtgctaa agaaattttg
    11401 cgatcaaaag cagatatttg cgtagacaat aaagacttga aagaaataat aaaggtaata
    11461 taagatgaaa aaattttctc tttggtgtga ttttatagaa aatagttttt tagatgatga
    11521 ttttttaaat ttactatctc gcggtgtcaa tggagcaact tcaaatcccg ctatttttaa
    11581 aaatgctatt ttaaattcgc ctatctacaa agaaaaaata gccaaattaa aaggaaaaaa
    11641 ggcaaaagaa atttatgaag aacttgctat tgctgacata caaaaagcag cagacaagct
    11701 tgctccttta tatcacacgg gaaatgatgg ttttataagt cttgaaatcg atccgagatt
    11761 ttatgataat acaagcttaa gtttgggcga agcaaaaaaa ctttatagtg ccattggtaa
    11821 agacaatgtg atgattaaag ttccagcaac caatgcttct tatgaagtaa tgtatgaatt
    11881 gatgaaaaat ggcatcagcg taaatgctac tttaattttt tctttagagc aaagccaaaa
    11941 atgctttgaa gctttaaatg caggtttgat tgaatttaga aaaaacaata tagccttgca
    12001 aggaaaaaat actcacttaa gaactccgca agctgttata agcatctttg taagtcgttt
    12061 tgatagactt ttaaattcta aagcaaaaga acaaaatcgt ataggaattt taaatgcaaa
    12121 tttagcctat aataatatca tctccaaaaa cgaacctaat atccgagctt tatttgcaag
    12181 cacgggtgta aaaggcgatg atttaccaaa agattattat atcaaagaac ttctttttga
    12241 aaatagcata aatactgccc cactagatgc tatcaatgca tttaaaaccg aaattgaatt
    12301 taaaaaacct ttaatgaatt ttgaaattta cacacaactt aatgctatta tttcacaaaa
    12361 tgaaagagaa aaagcttgtg atgaattact aaaagatggt ttagagcaat tttgcatagc
    12421 ttttgaagaa attttacaag cactaaacta acgaattttt ttaagcttct tacgatgaag
    12481 ttttattatt tttgatgggg tattttcaac aaatatctca tcaaccacaa catctgcgac
    12541 acttctagcc caaagctcat caaatttttg tccgtgcttg tttgcagaac ttgaataaaa
    12601 acaacccatt ttttctaaga attgtgcgtg tttgcaatct ttgacaattc ttactgcttg
    12661 attgtttgga taaataaaag ttgttttttt ggcacgacgc acccaatttt taaattgatt
    12721 tggaactctt acgatttttt ttaactcgtc aaattttgca gaagtgatca agcagggctg
    12781 atctttagcc ctgcctttta aagcattgat ttcttctaaa tttttactta aaaatcctgc
    12841 tgtagtatct gtttgcgcta gataaatcat caaggaactg gcaagcctaa tttttgtaaa
    12901 ggaatatact caaaataata ttgacagcgt acactaataa tatagtctag aacatcttta
    12961 tattcaggtt tcctaaacca atcatttaaa agataaatat attctacttc gatatttgcc
    13021 ctagaaaata gtttttggta ttgctttttc ttaaaatcac aagtctgtag tttctcatct
    13081 acagatccag ccacactttg aaatttacac tcaataatat gcaaagtatt gttaataatt
    13141 acatagatac tatcatctgg caaaagtttt ttagaaatac actctttcca attaatcttc
    13201 aactcttcta aaaattcata aagtttgtat tttttaaaaa ttcttgctac tttttcatta
    13261 ttaaaaaaga cttcttgttt ttcattaaga gtataaccat tttgttgcga caaaaaagtt
    13321 gctaaatcca cttgtccctc aaatactaat ccagttcgag tattgcttcc gccacttccg
    13381 cccgtaatca taaataacct ccttgaaata aactgttttt atttaataat tttaaatcat
    13441 taattttatt tttaatagta ttaaaattat tttctagttc tttctttcta gctattgata
    13501 tgttgataaa ttcattttct ttctcaaaac ctataaattg tctatttaat aaatttgctg
    13561 caatgcctgt agttgagctt ccactaaaag gatcgcagat taatgagctt tcatcgcttg
    13621 ccattaaaat aagtctagta agtaaagcca aaggtttttg tgtggggtgt tttccatttg
    13681 ttttttccca aggagcaata gcattaaaag cccaaacatc acgcatttgt ttattactgt
    13741 ttaaaagttt taaaatttca taattaaaaa tatgcttgtg tttataactt tttctagccc
    13801 aaataatttg ctctgtagaa tgcgtaagat agcggcaact aaaatttggt ggaggatttg
    13861 ttttttgcca agtaatgata tttaaaattt taaaatcaag tttttgtaaa attctaccaa
    13921 gtgagaaaac attatggtaa gtcccactaa tcaaaatact tccagtatct tttagcgcta
    13981 tttttgcatt agatagccat tttaaattaa atttatctat tttttcaata tcgtcaccct
    14041 tatcccagtt tcctttattt acactaacta ttttaccatt ttgaatactt aatccatcat
    14101 ttgaaaggaa ataaggcgga tcagcaaaaa tcaaatcaaa ttgtttttca aatttaggca
    14161 ataatttatt gcaatcattt tgataaaggg taaaattttt atctttgctg ataaaaatag
    14221 gtttttcttt taaattcact taagccactc ctgcaggctt ttaacttcta aataactttg
    14281 attttgtatc gctttaatcg attttgcacc cgcaagagct gaacgcaaat ttgtaaaata
    14341 agggatttta aaacggataa tattttcacg aatttttttc gtatcccctg caaaagtatg
    14401 actatcactt gtatttatca ctagctgaat ttctccattt ttcagcttgt cttccacatt
    14461 tggacgccct tctgaaattt tatgtacaag ctcacactca aaaccagttt ctacaatttc
    14521 tttacaagtt ccacttgtag ccattagttt aaaacctaat ttagagtatt cactcgcaag
    14581 ttttttagca tactttttat ctttttcttt taaagaaatg aaaaccactc cactttctgg
    14641 caaatgatta aaagatgaaa tttgactttt cgcgtaagaa ttagcaaaat ccttacttat
    14701 gcccataacc tcacctgttg atctcatctc aggtcctagc tctaaatcac ttccactaag
    14761 cttagaaaaa ggaaataccg cttcttttac gctgatatat tttgaaggct taggacgtaa
    14821 aatcgcattg tcaaaattca ccacaccaaa agcatcataa aattttaaag cttcttttaa
    14881 attcccctgc cacattacgc gtgttgcaac ttttgccaaa ggtatacctg tagctttgct
    14941 tacaaaaggt acggtacgac ttgctctagg atttacttct atcatataaa gttcgttatt
    15001 gtaaattgca aattgtatat ttaaaagtcc tacaacgcct aaatttaaag caatatctgc
    15061 ggttttttgt acgatttgtt cttgcatttt ttcatcaata ttgcaaggtg gcaaagaaca
    15121 tgcgctatca cctgaatgaa ttcctgcttc ttcaatatgc tccataattc ctgctacata
    15181 aacatcttta ccatcgctga tagcatcaac atcgatttca gtcgcattat ctaaatactg
    15241 atcgatcaaa acaggacttt tatcgcttac atccacagct tcttgcatat aaagtctaag
    15301 ttcactctca tcagtaacca cacgcatagc tcttccgcct aaaacataac ttggtcttac
    15361 aagtacagga taacctatct cgctcgcttt taaaaccgct tcttctacgc ttgtagcggt
    15421 agaattttta ggttgattga taccaagttt tgtaataaat tcagcaaatt tctttctatc
    15481 ttctgccata tcgatcactc ttgcgcttgt gcctatgatt ttagccccaa aagcactcaa
    15541 gcgtttagca aatttaagcg gagtttgacc accaaaatgc actataactc catctggctt
    15601 ttcgcgttca attacaccac gcaaatgctc aaaatcaata ggttcaaaat acaaaatatc
    15661 actcgtatca taatctgtag aaacggtttc tggattgcaa ttatacataa tagtttttac
    15721 gcctaaatcc tttaatgcaa aagaagcatg cacacaagca tagtcaaatt ctatcccttg
    15781 tcctatacga tttggccccc cgcctataat catcactttt ttttcttttt tatctcttgc
    15841 ttcatttttg ctttgagtaa gttcacttac attgatacta gaataaagat aaggagttaa
    15901 agcttcaaat tcccctgcac aagtatctac ttcgctaaat tctgctatga ttttttgctt
    15961 cattcttgca taatagatat cattttgact taattctaaa ttatctttta gattcacaag
    16021 taaggcgatc atcttgtctg aaaaacccat agtttttgct tttcttaaaa gggttttgtt
    16081 atgcaagata tccatatcaa tttgctcttc aaaatctacg atttctttaa tttgggataa
    16141 aaaccaagga tcaattttac aaagctcata aagctctttt acatcaaaac cctctctaaa
    16201 agcttgcgct acataaagca aacgcttttc gttagcgttg cgaattttaa agataagatc
    16261 gtttttatct tcaaatttca ctctatcaaa accacttaaa tttctttcca aagaacaaag
    16321 tgctttttgt atactttctt taaaagttcg gccaatcgcc attacctcac ccacgctttt
    16381 catcgctgtg cctaaagttg tattggctcc tgggaatttc tcaaaagtaa aacgaggaat
    16441 ttttgtaaca atataatcaa tcacaggttc aaaactagca ggagtaccgg taatatcatt
    16501 ttttatctca tctaagctaa atccaatcgc caaaagtgtt gcaacctttg ctataggata
    16561 acccgttgct ttagaagcta gggcgcttga tcttgaaacc cttggattca tttcaataac
    16621 tatcattcta ccatttgttg gattgacagc aaattgcaca tttgatccgc ccgtatcgac
    16681 acctatttca cgcaaaatgg caaaagaggc attacgcatg acttggtatt ctttatcagt
    16741 taaagtaaga gcaggtgcga ctgtgatact atctcctgta tgtaccccca taggatcaag
    16801 attttctata ctacacacga taatgcaatt atcattctta tcacggataa cttccatttc
    16861 atactctttc catccaagca aactttcttc gataagaatt tcatggattg gcgagagtgc
    16921 taaagcagca ttagcgagtt ctttaaattc atccatattg taaaccacac cacttccagc
    16981 accgcctaag gtataagaag cacggatcat taaaggaaag ccgatttcat ccacagcttt
    17041 tagagcttca tcataattat acgcatacat agattttggt aaatccatgt cgattttttt
    17101 catacattct ttaaaaactt gacgatcttc gcctttttta atcgcttcag ggtttgcacc
    17161 taaaaacttc acatcgccta aaagcccact ttcataaact tccatagcta catttagagc
    17221 cacttgtcca cccatagttg gcaaaatggc atcgattttc tcttttttaa taatgcttaa
    17281 aatactttcc ctggttacag gctctatata agtagcatct gcaaattcgg gatcagtcat
    17341 aatagtcgct gggttagaat tgattaaaac tacgcgatac ccttgttctt ttaaagtttt
    17401 tgctgcttga gttcctgaat aatcaaattc acaagcttga cctataacga taggaccact
    17461 tcctataagt aaaatatttt taatatctgt tcgttttggc atgaattttc ctaagagcat
    17521 aaatttgggc tgattataac aaattttagt tttacaaact ttgaaattct gttataattt
    17581 taaaaaaata ggcaagaaag aaatactcat gaaaaaaatt aaaattttag tttttttaat
    17641 atttt
//
LOCUS       DAQUWA010000038        17591 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.038, whole genome shotgun sequence.
ACCESSION   DAQUWA010000038 DAQUWA010000000
VERSION     DAQUWA010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17591
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.038"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(32..337)
                     /locus_tag="R8X70_001103"
     CDS             complement(32..337)
                     /locus_tag="R8X70_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928886.1"
                     /translation="MVSAYPKPIKIFKNTAIKVSNFPFDPNLKIKIYSLNSYIGNIIP
                     QFTNTKDSIIINFTGKSVTDDSRFRVEFLNNDKPIGFFFDFDVTLQKIYNSAILPQN"
     gene            658..1635
                     /locus_tag="R8X70_001104"
     CDS             658..1635
                     /locus_tag="R8X70_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEF2928887.1"
                     /translation="MLKKILAFYFICISALGASDLVKIYLNQGLDAVGVAIEKELTNK
                     DFWLDEIGDRNISLGYYDDDVAIVLTNKTDKILRVYSYSDGKIKQDFEQKAIITGLMG
                     DKQVEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
                     LDGTRLDEFKTRGCIALFNENLEEFAKVVQDKKVFAMTEEKEKVRAKKEDIAALLADL
                     FAWKLAWTDSDINTYLNFYDEKQFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINI
                     SPYPNVENETMYRISFYEDYYTKNYQFKGDKILYVKIDSKGKMKILAEQ"
     gene            1635..2624
                     /locus_tag="R8X70_001105"
     CDS             1635..2624
                     /locus_tag="R8X70_001105"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEF2928888.1"
                     /translation="MSLIKINQKAYESNLKIIAEKIGSFSRLICVFKDNAYGHGAKIL
                     APIASTLGVNFIAVKNEKEAYELEDFFDNILILSHHPHGKENSKFIYALNDIDKINAY
                     QNDTRIHLKIDTGMHRNGVCVEDLNEALLKIKCSALKLEGIFTHFAGADEMDASFFIQ
                     REKFSKAKDIAKQIYKNLIFHSHNSPALFRAVKIPEDELCRTGLAQFGYGDESLKKVL
                     SLYAHRLSHRELQIGQSVGYGGAFSATEKIKIATYDLGYADGLFRYDGKGDLLLANKQ
                     KILGKISMDSFSCQDFGKEICVFDNADVWADFFNTINYEILVKLHPDIPRVLV"
     gene            2627..3094
                     /locus_tag="R8X70_001106"
     CDS             2627..3094
                     /locus_tag="R8X70_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEF2928889.1"
                     /translation="MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIVKPIVFDISQKAV
                     RRAGLDYWEKLEPVIWESLDIFLEHNLIYKDRFFFATTKSNKFYFQAKFQENDFLFFG
                     SESYGLPMELMQLNWDNAITIPMKACGRSLNLATSVGIVSYEALRQNFDRFSL"
     gene            3251..4680
                     /locus_tag="R8X70_001107"
                     /pseudo
     CDS             3251..4680
                     /locus_tag="R8X70_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004275018.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
     gene            complement(4707..5435)
                     /locus_tag="R8X70_001108"
     CDS             complement(4707..5435)
                     /locus_tag="R8X70_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEF2928890.1"
                     /translation="MIEIKNLNKKYGNLEVIKNISTKISKGDIISIIGPSGGGKSTFL
                     RCINRLELADSGEILIKGRNILDEQTDINKIRQKVSMVFQHFNLFANKNVLQNLCLAP
                     VKTGILSEDEAINKAEILLKKVGLSDKKEVMPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDLAAEGLTMIVVTHEMGFARNVANRIFFMDKGELAVDA
                     SPKEVFENPKNERLKEFLNKVLNH"
     gene            complement(5428..6171)
                     /locus_tag="R8X70_001109"
     CDS             complement(5428..6171)
                     /locus_tag="R8X70_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEF2928891.1"
                     /translation="MNQKNIRIFVFFAIILFWGYFSFPIEILQIKEADGAINYGYTPN
                     AQAYIKSYFITLLLTACSAIIGVVVGFSLAILHFSKIKVLNFIIDEYIDIIRGTPVIL
                     QLMIFAFVIFTFIDNLYAAIFALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYK
                     TSMKEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPL
                     IFTGLVYYVSVKIFSYFAKKLELRMSKND"
     gene            6282..6422
                     /locus_tag="R8X70_001110"
     CDS             6282..6422
                     /locus_tag="R8X70_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928892.1"
                     /translation="MIVLDFILVVAFVLFMIFLIVGFNRQMSEKAKIREEKFKNKERK
                     NE"
     gene            6415..6984
                     /locus_tag="R8X70_001111"
     CDS             6415..6984
                     /locus_tag="R8X70_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEF2928893.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRAAELSGNLEVIIASLDN
                     ELLVKGANGISIKADCSLEAVDTKNLDAIALAGGFDGMNNLKNSNEILSIIKKLHSEG
                     KIVSAICASPIVLNAAGVLEGEFTCYPSCETGLQGNRVNKAVVVNKNVITSAGPATAI
                     LFGLELAKQLCGDEIYNSLYEGLLIPLTK"
     gene            complement(7023..7388)
                     /locus_tag="R8X70_001112"
     CDS             complement(7023..7388)
                     /locus_tag="R8X70_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEF2928894.1"
                     /translation="MKEKTVFELIVEGKIPCNKVLENNDFLAFHDIAPKAPIHILIIP
                     KKHFKDFQEFDPKLMEKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFRLPKEKDENENPQALF"
     gene            7509..8501
                     /gene="pheS"
                     /locus_tag="R8X70_001113"
     CDS             7509..8501
                     /gene="pheS"
                     /locus_tag="R8X70_001113"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEF2928895.1"
                     /translation="MQNFIEQIQECKNLNDLEALRVAVLGKKGILTESFAKLKDLAGE
                     EKKEFAAKLNSQKDAFNEAYLSKFKILENLALEEKMKQDALDFNYFDESPTNGALHPV
                     MSTMDRIIEYFVNLNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGQRVSFANL
                     KSILEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGCGCRVCKQTGWLEVLG
                     CGVVDPNVFNFVGYKDVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            8498..10819
                     /locus_tag="R8X70_001114"
     CDS             8498..10819
                     /locus_tag="R8X70_001114"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEF2928896.1"
                     /translation="MIITKSWLSDWLDFKDKSLDDIAHTLNSIGIEVDKICTLKVPDK
                     IVVGFVKEKVKHENSDKLSICQVDVGNEILQIVCGAQNVAQGQFVAVALKGALMPNGM
                     EIKEAKLRGVDSCGMLCSSTELGFEKINDGIMLLDDSIGKLELGKALNSYEIFNDGLI
                     EVELTPNRGDCLSIYGIARDLAVALNLNLKEKPPFKEGENILGIGRILRLSAEKELNS
                     LYNYRAIELKEKIQTNLLISLRLAQIENFGKNPIENLLNYATHSTGVLFNAYDLNSFY
                     KENEEFTFSLVKETRGETKISYQDELLSVSGIYQEEKFKCKEDSKIIIIEANYTDPMI
                     IADAKMAYKKQDEQTIYRSFRGSEPKLNLGMDFLLSVLEKNPNLIIYSSSQQIITNKE
                     LSNIAISIESINKTIGQEIDKDEVLKILKKLGFELIISADGLVNVKAPMHRPDIKNLA
                     DICEEVVRIIGIDNIASKGLEFVEKNRLNSTYKNYKELVELRKKAVANGYFESLHYVL
                     DNEEELKSLGFNPIKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     VVFGTNNEELNHIAFVHSGYQEEPKISNKAKPELVNFYDFLLDLKNIIGDFKLKASKH
                     DILSPYEQADIYLKDLKIGFAGRLHLKIENERDLLKTYICELDLNLIKHHFKLAKPYS
                     KFPSISRDLSILIPKGFEYEKIKNCIEELDLENLENFRLVDLYSDASLENSYSLTLKF
                     VFRDMNKTLEEAQVAEHMDKILQSFKEMGLELR"
     gene            10816..12096
                     /gene="aroA"
                     /locus_tag="R8X70_001115"
     CDS             10816..12096
                     /gene="aroA"
                     /locus_tag="R8X70_001115"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEF2928897.1"
                     /translation="MKINALESFNTEISDIAADKSISHRFAIFSLLTQSENRAKNYLL
                     AEDTLNTLKIIENLGAKVKREGSSVSIMPPSEILSPNCVLECGNSGTAMRLMIGFLAG
                     VSGFFVLSGDKYLNNRPMKRICKPLSEIGAKIYGREQANLAPLCIEGQKLKAFDYKSE
                     ISSAQVKTAMILSAFRADKTSKFSEISLSRNHSENMLKAMNAPLKISDDYLSLEISPL
                     NQALKAQDILIPNDPSSAFYFALAAIILPNSKVVLKNILLNPTRIEAYKILQKMGAKL
                     EIKITQNDFETIGEIHASSSELKAVEVKENIAWLIDEAPALAIAFALAKGKSKLINAK
                     ELRVKESDRIAATVENLKLCGVNAKELEDGFEIEGSQIKKAKIKSYGDHRIAMSFAIL
                     GLLCGMEIDESECIKTSFPNFMDILTKIGARIDY"
     gene            12086..12916
                     /locus_tag="R8X70_001116"
     CDS             12086..12916
                     /locus_tag="R8X70_001116"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEF2928898.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEIARL
                     QKNFNVKTLENIRALSDEKKAIIRTHGITKQDLEELKKKDIEIFDATCPFVTKPQQIC
                     EQMSAEGYDVVIFGDENHPEVKGVRSYVATKAYVVLDKKDLENIKLPNKIAVVSQTTK
                     KPEHFMEIVNFLILRVKEVRVFNTICDATFKNQDAIKELSVKSDVMVVVGGKNSANTK
                     QLFLIAKANCEDSYLIETEEELQKEWFLNKTHCGISAGASTPDWIIKKVIAKIESFKC
                     "
     gene            13056..14726
                     /locus_tag="R8X70_001117"
     CDS             13056..14726
                     /locus_tag="R8X70_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEF2928899.1"
                     /translation="MSEVNKKVQNNLEDYLEDEDFGQLLEAFDKSREETITEGVIVEI
                     KNDEVYVDIGRKSEGILALNEIQDENANLLFKVGDSIKVAVVGSRGGRSLLSHKKALR
                     KEKVIDFIQNYKEDDEYIFEVKVVGKNKGGLVVVNDDDVEFFLPKSQYGFKENNNLIG
                     KTFKVKIIKVDKEEQSIIVSRKKTLDDERKKRKELINNIAQQEGLIEGVVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPSILYKEGDKVPVKVVKYDKDRKHLSLSIKAALPD
                     PWGEIKDSLEVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYIS
                     KGQEIDVEVIEINSDERRLRVSLRNLLSKPFDEFMKNHKIGDVIEGEVTSTTSFGAFV
                     KIGSVEGLLHNEDASWDRNEKCKDKFNNGDIIKVKIIKIDEEGQKISLSIKELSESPV
                     QEYAKNHKVGDIVKGKIRDIKDFGVFVELNKNVDALIHKEDISASTLENLKIGDEIEA
                     AIAFIDEKKNRIRLSVKNLVRIKEREVLNEINSDDKVTLGDIIKDQLA"
     gene            14729..15217
                     /locus_tag="R8X70_001118"
     CDS             14729..15217
                     /locus_tag="R8X70_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928900.1"
                     /translation="MKKYATISILSILLLILLIVVFVLLWKFKANSNFIPEFAKDTNT
                     HQIEERQTQELTWREELAKWPSKDFTPAVEQFTLHFDADTSELKEKNKYYQLVVNKHD
                     IYSMFCLRQTLNSFNVKYFLLKSGESPEIFLDTGNKNLIDDIIKELKKYKINTEAKEI
                     WL"
     gene            15214..16797
                     /locus_tag="R8X70_001119"
     CDS             15214..16797
                     /locus_tag="R8X70_001119"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEF2928901.1"
                     /translation="MKKKIIVCDAILDKGVELLRKAEDIELIEAAKVPKNELMDMLAD
                     VEVAITRSSTDVDVNFLNHAKKLKALIRAGVGVDNVDIPECSKRGVIVMNVPTANTIA
                     AVELTMAHLLSSARSFVNAHNFLKNERKWEREKWYGVELMGKTLGVIGFGNIGSRVAI
                     RAKAFGMKILAYDPYISASKITDLDMEQAKSLDEILTQSDFITIHTPKTKETDGMIGA
                     NEIAKMKDGIRLINCARGGLYTEEALCEGLKSGKIAWLGIDVFKKEPATNHPLLDFEN
                     VSVTSHLGANTLESQDNIAREACEQALNAARGVAYPNALNLPIKTEDLPPFVAPYIEL
                     VSKMAFLAVQIDKNPIKSIKLEAEGVIGEYATSMLTFAAVGALSGILGEKINYVNAEF
                     VAKEKGVDLSCETLPNSGYNNKLSVKIITENSNINVSGTVFNENEQRIVGLNGFQTDF
                     KPKGKMIIFKNKDIPGVIAKISSVLASKNINIADFRLGRDGFGYALAVVLIDEKVQKE
                     VLEELRQLEACIFVQYVEI"
     gene            16784..17446
                     /locus_tag="R8X70_001120"
     CDS             16784..17446
                     /locus_tag="R8X70_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEF2928902.1"
                     /translation="MSKSKILIIEDDIDLNDLLSLRLKACDYQIFSLLDFKGVEDLLD
                     SEQIDLLIVDRNLPSGDSLDRIKELRKQGYKEAVIFLTAKTLHQDLLEGFESGCDDYM
                     CKPFDFNELLLRIKAILKRHKREEEKLVFKDFSLDLINYEFFYKNEKLDVSNLEYELL
                     KCFFENPNTLLTRQFLSENVWKDDTTSDKTINIALTRLRNKFPKLKEHIISVRGIGYK
                     IC"
     gene            17440..>17591
                     /locus_tag="R8X70_001121"
     CDS             17440..>17591
                     /locus_tag="R8X70_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEF2928903.1"
                     /translation="MLKTKNIFITFFVLLILCFGVIFYTLTNSYLNFLLLKQYEQKIK
                     SLDDVL"
BASE COUNT         6302 a         2274 c         3112 g         5903 t
ORIGIN      
        1 tttttttaaa aaatgaaatt ttttattaaa tttaattttg aggcaagatt gcactattgt
       61 atattttttg caaagtaaca tcaaaatcaa agaaaaagcc tatgggttta tcattgttta
      121 aaaactcaac cctaaagcga gaatcatctg taacactttt tcctgtaaaa tttataataa
      181 ttgaatcctt tgtgtttgta aattgtggga taatgtttcc tatatatgag tttaaactat
      241 aaattttaat ttttaaattt ggatcaaagg gaaaattact tactttaatg gcggtatttt
      301 taaagatttt tataggttta ggataagcag ataccaaaat ttattttcct ttaaacaaaa
      361 aggtgtaatc ttgagaattt aaatcatatt ttaatggaag gcaggtattg agtttaaaca
      421 cattatcctt tttttatcat ataaaatata aaaggttaat gaaaatataa tcagaaatat
      481 tgctgctata aaaaaatttt tcatgataat aaaacaatgc ctttaaaatt gattttttcg
      541 tgatttggga tattctacaa aaaatttaat ataattaata ttttttaaga aaaaaaataa
      601 tataatcaca gacatttttg tcaaaaaata ttataaatac agttttaagg aaaagcattg
      661 cttaaaaaga ttttagcatt ttactttata tgcatttcag ctcttggggc ttctgatttg
      721 gtaaaaattt atttaaatca gggtttagat gctgtaggtg tagcaattga aaaagaatta
      781 acaaataaag atttttggtt agatgaaata ggcgatagaa atatctcttt aggatattac
      841 gatgatgatg ttgctattgt gcttacaaat aagacagata aaattctccg tgtttattct
      901 tatagtgatg ggaagattaa acaagacttt gaacaaaaag ctatcattac aggacttatg
      961 ggggataaac aagttgaggg ggatttaaaa actccagtag gcttttatga acttggacgc
     1021 aaatttaatc caggggatcc ttattatggt ccttttgcgt ttgcaacaac ttatcctaat
     1081 ttacttgata aagttcaagg caaaacaggc ggagggattt ggatacatgg ctatccttta
     1141 gatggaacaa gattggatga atttaaaacg cgtggttgca tagccttatt taatgaaaat
     1201 cttgaagaat ttgcaaaagt agtacaagat aaaaaagtat ttgctatgac agaggaaaaa
     1261 gaaaaagtaa gggccaaaaa agaagatata gctgctttac ttgcagatct ttttgcttgg
     1321 aagctagctt ggacagatag cgatataaat acttatttaa atttctacga tgagaaacaa
     1381 tttaagcgtt ttgataaaat gaaatttgaa caatttgctt ctatgaaaaa gtctattttt
     1441 tctagaaaag aagacaaaaa gattaaattt tcggatataa atatcagccc ttatccgaat
     1501 gtagaaaatg agactatgta tagaatttca ttttatgagg attattatac taaaaactat
     1561 caatttaaag gggataaaat cttatatgtt aaaattgata gcaagggaaa aatgaaaatc
     1621 ttagcagaac aataatgtct ttaattaaaa tcaatcaaaa agcttatgaa agcaatttaa
     1681 aaattatagc tgaaaaaata ggtagctttt caagattgat ttgtgttttt aaagataatg
     1741 cttatgggca tggagcaaaa attttagctc cgattgctag tactttgggc gttaatttta
     1801 tagcagttaa aaatgaaaaa gaagcttatg agctcgaaga tttttttgat aatattttaa
     1861 ttctttctca ccatccacat ggcaaagaaa attctaaatt tatttatgct ctaaatgata
     1921 tagataaaat caatgcttat caaaacgata caagaataca tcttaaaata gacacaggaa
     1981 tgcatcgcaa tggagtttgc gttgaggatt taaatgaagc tttgttgaaa atcaaatgtt
     2041 ctgcattgaa gctagagggt atatttacac attttgcagg tgcagatgaa atggatgcaa
     2101 gtttttttat tcaaagggaa aaattttcta aagctaaaga tattgctaaa caaatttata
     2161 aaaatttgat atttcactcg cataattccc cggctttatt tagagctgta aaaatacccg
     2221 aagatgagct ttgtagaaca ggcttagcgc aatttggtta tggtgatgaa agtctaaaaa
     2281 aagttttaag tttatatgct catagattaa gtcatagaga attacaaata ggtcaaagtg
     2341 taggttatgg tggagctttt agtgcgacag aaaaaatcaa aatagctacc tatgatttgg
     2401 gttatgcaga tggtttgttt cgttatgatg gcaagggaga tttattgcta gccaataaac
     2461 aaaaaatttt aggtaaaatt tcaatggata gtttttcttg tcaagatttt ggaaaggaaa
     2521 tatgtgtgtt tgataatgca gatgtttggg cagatttttt caatactatc aattatgaaa
     2581 ttttagtaaa actccatcct gatatcccaa gagtattggt gtaaatatgt ttaatattgt
     2641 tttagttcat cctagaattc ctcaaaatac tggcagtata ggtagaatgt gttttaatgc
     2701 gggttttaaa ttgcatattg tcaaacccat agtttttgat atttctcaaa aagcagtgcg
     2761 tagagcagga cttgattatt gggaaaagct tgagcctgta atttgggaaa gtttagatat
     2821 ctttcttgaa cacaatctca tttacaaaga tcgttttttc tttgcgacaa caaaaagtaa
     2881 taaattttat tttcaagcca aatttcaaga aaatgatttt ttattttttg gtagcgagag
     2941 ctatggttta ccgatggaat taatgcagct taactgggat aatgccatta caatccctat
     3001 gaaagcttgt ggtagaagtt taaatttggc cacaagtgtt ggcattgttt cttatgaagc
     3061 cttgcgtcaa aattttgatc gttttagttt ataatcttac ttaactttat atttttttaa
     3121 atattttgta aattatcaat attttttcat aaaaaatatg ctaaagttgt agcgaatttt
     3181 acttttttaa aggagaaata tgggtgagca aaatttaact ttaaacccct cagttccatt
     3241 cgatgaaaag atattaaaaa ttctcgaata tgttctgcca tatactgata ctataatggt
     3301 agttttactt ataatctgcg gaatttacta tagtttctta actagatttg tacaatttcg
     3361 catgttaaaa tccgttttta aaattctaac tgaaagaaat gaaaaccata ccaaagagca
     3421 catatctcct tttcaagctt tgatgatatc aacagcttct agggtaggta taggaaatat
     3481 tgcaggcatc tctatcgcga tcgctgcagg aggagcaggt gctttatttt ggatgtggtt
     3541 tatggcgttt tttggtggtg cttcagcttt tgcagaaagc actttagcac aaatttacaa
     3601 gtctaaagat aatacaggag gatttaaagg tggtcctgct tattatataa aaaaagcttt
     3661 aggttctcat ttttttggag cttttttttg cttttattct tattattact tatgcttatg
     3721 gatttaacgg acttcaaagt caaactatga cttcggcttt taaagtttat tatgatatgt
     3781 ttaatcctaa tgctacaaca gattttgctt caagttcttg gcctatgatt attggtatta
     3841 ttttaaccct ttttggaatt tggatgtttt tttcacatca tacaaaaata ggtaagctct
     3901 ttaatcgtcc cttttatggc attagcttat atcttacttg cctttatagc tgttttgatt
     3961 aattttgaaa aaattccttc tgtaatagtg cttatatttg aaagtgcttt tgattttaaa
     4021 gcgattttgg gtggatttgc tggttctgct ttggttatag gaattaaaag aggactcttt
     4081 tcaaatgagg cgggcatggg ttctgctcca aatgctgccg ctgctgctct tacaagtcac
     4141 cctgcaaaac aaggtattat acaagcgttt tcggttttga ttgatgttat tgtttgcaca
     4201 agttcagggt ttttggttct tttttctatg gcatatttta atgttggagc cgatggaaaa
     4261 cctcttttaa ccgcaatgcc tttagtacaa gaagcaatgc gtgaatatta tggcggtttt
     4321 ggagtccatt ttattactat agctattgtt ttatttgcta tcacttcttt gatagggaat
     4381 tactattatg cccaagctaa tgtaaaatat cttacaaatt ccaaattagt catgaatttg
     4441 tttagaatta ctgctgtagc aatgattttt ataggttctc aaatgaattt aaaacttgct
     4501 tggagtttag cggatttaac tatggcgttt atggcagtta caaatattgt ttctttactt
     4561 cttttagggg gtatagtcaa taaagtattg aaagatttca acacccaaca agactctaaa
     4621 ataaatccaa aattcagcgc ttcaaaacta ggtattaaaa atgctgaatg ctgggactga
     4681 ttaaaaagcc ttaattttaa ggctttttag tgatttaaaa ccttatttaa aaattctttc
     4741 aatctttcat tttttggatt ttcaaatact tctttagggc ttgcatccac tgcaagttct
     4801 cctttatcca tgaaaaaaat gcgattagcg acatttctgg caaaacccat ttcatgagta
     4861 actactatca tagtaagccc ttcagcggcc aaatccttca tgatacttaa aacttctcct
     4921 atcatttcag gatcaagtgc tgaagtaggc tcatcaaata aaatgacatc aggattcatc
     4981 atcaaacttc ttgctatggc aatgcgttgc ttttgtccgc ctgaaagttt gtgcggcatt
     5041 acctcttttt tatcggataa tcctactttt ttaagtaaaa tttcagcttt atttatagct
     5101 tcatcttcgc ttaagattcc tgtttttact ggggctaagc ataagttttg caatacattt
     5161 ttattggcaa aaagattaaa atgttgaaat accatactga ctttttgacg aattttatta
     5221 atatcagttt gttcatctaa gatattgcgt cctttgataa gaatttctcc actgtctgca
     5281 agttccaagc ggttaataca acgcaaaaaa gtactttttc cacccccact tggacctatg
     5341 atggatataa tatcgccttt ggaaattttg gtgctgatat ttttaataac ttctaaattt
     5401 ccatattttt tatttaaatt tttaatctca atcatttttg ctcatcctta actcaagttt
     5461 tttagcaaaa taactaaaaa tttttacact tacataatac acaagtcctg taaaaataag
     5521 aggttttgga ttgtataata ccgcttgaag gctttggctt tgcatagtaa tatcaataac
     5581 gcttataaat ccaaccacgg aagtttcttt aaacaaagaa ataaattcat tagccaaagc
     5641 gggtaaaatg tttttggtcg cttgtggtaa tataatttct ttcattgaag ttttataatc
     5701 aagccccata gcacgcgctg cttccatttg tcctttatcg acactattaa tcccgcttct
     5761 tacgatttct gctatataag cagagctatt aagccctagg gcaaatattg ctgcataaag
     5821 attatcaata aaagtaaaaa ttacaaaagc aaaaatcata agttgtaata ttacaggggt
     5881 tcctcttata atatcaatat attcatctat gataaaattt aaaactttta tctttgaaaa
     5941 gtgtaaaatg gcaagactaa aaccaacaac tacaccaata attgccgagc aagcagtaag
     6001 taaaagagtg ataaaataac tttttatgta agcttgcgca tttggagtgt atccgtaatt
     6061 tatagcccca tccgcttctt taatttgtaa aatttcaata ggaaaagaaa aatatcccca
     6121 aaaaagaatg atggcgaaaa atacaaatat tcttatattt ttttgattca aaacacaacc
     6181 tttatcaaaa atttttgact taaattttat aaaattatcg tttgattttt ctttaaagat
     6241 ttgcaataat atgttagaat tttcaaaaaa ggcttcatga tatgatagtt ttggatttta
     6301 ttttagtcgt agcttttgta ctttttatga tatttttaat agtaggattt aaccgtcaaa
     6361 tgagtgaaaa agctaaaatt cgagaagaaa aatttaaaaa taaggagaga aaaaatgagt
     6421 aaaaaagtat tgattccttt ggctcaagga tttgaagaag ctgagtttat aggtatagca
     6481 gatgtattaa aaagagctgc ggaattaagt gggaatttgg aagttattat cgcttctttg
     6541 gataatgaac ttttggtaaa aggtgcaaat gggatcagca taaaagcgga ttgttcttta
     6601 gaagctgtag acactaaaaa tctcgatgca atagccttgg cgggtggttt tgatggtatg
     6661 aataatctta aaaattcaaa tgaaatttta agtattatta aaaaactaca cagtgaaggc
     6721 aagattgttt ctgcaatttg tgcttctcct atagtattaa atgctgctgg agttttagag
     6781 ggtgaattta cttgctatcc aagttgcgaa acaggtcttc aaggaaatag agtgaataaa
     6841 gctgtagttg taaataaaaa tgttattaca agtgcaggtc ctgcaacggc tattttattt
     6901 ggattagagc ttgcaaagca actatgcggt gatgaaattt ataattcatt atatgaaggt
     6961 ttgcttattc ctttaacaaa ataagcattt tgttatgata gtgtaaaaaa cactatcata
     7021 aattaaaata aagcttgagg attttcattc tcatcttttt ctttaggaag tctaaagcca
     7081 cccaacatat gaaaatgtag atgaaaaact tcttgaccgc tgtttttgcc acaatttgtt
     7141 accaagcgat atccactttt atccactcct aaaagtacag ccaattcttg tataaaactt
     7201 gtcatttttt ccataagctt aggatcaaat tcttgaaaat ctttaaaatg ttttttcggg
     7261 ataataagta tatgaatggg cgccttagga gctatatcat gaaaagctaa aaaatcatta
     7321 ttttcaagta ctttattgca aggaattttt ccttcaacaa tgagttcaaa aacagttttt
     7381 tctttcatta tttatccttc tttagtgtta attttataca attatatctt taaactttag
     7441 tttttatgct gaatttaaaa tagtttttaa taaaattaaa actaaaaata acttattaag
     7501 gtagaaaatt gcaaaatttt atcgaacaaa ttcaagaatg taaaaattta aatgacttag
     7561 aggctcttcg agttgctgtc cttggaaaaa aaggtatctt aacagagagt tttgcaaaac
     7621 taaaagattt agcgggtgaa gaaaagaaag aatttgcagc taaattaaat tctcaaaaag
     7681 atgcttttaa tgaggcttat ttatcaaaat ttaaaatttt ggaaaatctt gctttagaag
     7741 aaaaaatgaa gcaagatgct cttgatttta actattttga tgaaagtcct acaaatggtg
     7801 ctttacatcc tgttatgagt actatggata gaattataga gtattttgta aatttaaatt
     7861 ttagcataga aaaaggccct ttaatagaag atgattttca taattttgaa gctttaaatt
     7921 taccaaaatc tcatccggca agagatatgc aagatacttt ttattttgac gataaaagac
     7981 ttttaagaac tcaaacttct cctgtgcaga ttcgaaccat gcttgcacaa aaaccaccca
     8041 ttagaatgat agctccagga gcagttttta gaagagattt tgatatcacc catactccca
     8101 tgtttcatca agtagaaggg cttgtagtag aagaagggca aagagtaagt tttgcaaatt
     8161 taaaaagtat tttagaggac tttttgcgtt atatgtttgg agatgtaaaa gtgcgttttc
     8221 gtcctagttt tttcccattt acagaaccat cagcagaagt tgatatttcg tgtgtatttt
     8281 gcaagggttg tggatgtagg gtttgtaagc aaacgggttg gcttgaggtt ttaggatgcg
     8341 gggttgtaga tcctaatgta tttaattttg taggttataa agatgtaagt ggctatgctt
     8401 ttggtcttgg tgtagaacgc tttgcaatgc ttttacatca aattcctgat ctaagatctt
     8461 tatttgaagg tgatttaaga ctattggagc aatttagatg ataattacta aaagttggtt
     8521 aagtgattgg ttagatttta aagataaaag tttagatgat atagcgcata cattaaattc
     8581 tataggtata gaagtagata aaatttgcac cttaaaagtg ccggataaaa tcgtagtggg
     8641 ttttgtcaaa gaaaaagtaa agcatgaaaa ttctgacaaa ttaagcattt gtcaagttga
     8701 tgttggaaat gaaatcttgc aaatagtttg tggagcccaa aatgtcgcac aagggcaatt
     8761 tgtcgcagtg gccttaaaag gtgctttaat gccaaatggt atggagatca aagaggctaa
     8821 attacgagga gtagattctt gcggtatgct ttgttctagc acagaattag gctttgaaaa
     8881 aatcaatgat ggcattatgc ttttagacga tagtataggc aaattagagc ttggaaaagc
     8941 tttaaattcc tatgaaattt ttaatgatgg tttgatcgaa gttgaattaa ctccaaatag
     9001 gggagattgt cttagtattt atggtatagc acgcgattta gcagtggctt tgaatttaaa
     9061 cttaaaagaa aaaccacctt ttaaagaagg ggaaaatatt ttaggcatag gtcgtatttt
     9121 acgcttgagt gctgaaaaag aattaaacag tctttataat tacagagcta tagaattaaa
     9181 agaaaaaatt caaaccaatc tactcattag tttaagattg gcacaaatag aaaattttgg
     9241 aaaaaaccct atagaaaatt tattaaatta cgcaacacac tctacaggtg tactctttaa
     9301 tgcttatgat ctcaattctt tttataagga aaatgaagaa tttactttta gcttagtcaa
     9361 agaaacacgg ggtgagacta aaatttctta ccaagatgaa cttcttagtg taagcggaat
     9421 ttaccaagaa gaaaaattta aatgcaaaga agattctaag ataatcatca tcgaggcaaa
     9481 ttatactgat ccaatgatta ttgcagatgc aaaaatggct tataaaaagc aagatgagca
     9541 aactatttat agaagtttta gaggaagtga gcctaaattg aatttaggta tggatttttt
     9601 attgagcgtt ttagaaaaaa atccaaattt gattatttat agctcctcac aacaaattat
     9661 aacaaataag gaattgtcta acatagcaat cagtattgaa agcattaata agactatagg
     9721 tcaagaaatc gataaggatg aagttttaaa aattcttaaa aaactaggtt ttgaacttat
     9781 aatttccgct gatggacttg ttaatgttaa agcccctatg catcgccctg atataaaaaa
     9841 tctagctgat atttgtgaag aagtagtgcg tattataggt attgataata tcgcttcaaa
     9901 aggtttggaa tttgtagaaa aaaatcgttt aaattccact tataaaaatt ataaagagct
     9961 agtagaactt agaaaaaaag cggtagctaa cggatatttt gaaagtttgc attatgtttt
    10021 agataatgaa gaggagctaa aatctcttgg ttttaatcct ataaaattaa aacttatcaa
    10081 tccaattact gcagagttaa acactctaag aacaacgctt ttaaaccatc ttttaaacgc
    10141 agcaagttta aatgcgaaaa attctaaaaa gattattaag ctttttgaac ttggagtagt
    10201 ttttggaact aataatgaag aactcaatca tatagctttt gtacattcag gctatcagga
    10261 agagcctaaa atttcgaata aagcaaagcc tgaattggta aatttttatg attttctttt
    10321 agatcttaaa aatatcatag gagattttaa attaaaagct tcaaagcatg atattttaag
    10381 tccttacgag caagctgata tttacttaaa agatttaaaa ataggttttg caggtcgctt
    10441 gcatttaaaa atagaaaacg aaagagattt gctaaaaaca tatatttgcg aacttgattt
    10501 aaatttgatt aaacatcatt ttaaattggc taaaccttat tctaaattcc caagcattag
    10561 cagagatctt agcatactta tacctaaggg ttttgaatat gaaaaaatta aaaattgcat
    10621 agaagaatta gatttagaaa atttagaaaa tttccgcttg gttgatttgt atagcgacgc
    10681 aagccttgaa aattcttata gtttaactct taaatttgtt tttagagata tgaataaaac
    10741 cttagaagag gctcaagttg cagaacatat ggataaaatt ttacaaagct ttaaagaaat
    10801 ggggcttgaa ttaagatgaa aataaatgcc ttagaatctt ttaatactga aatttctgat
    10861 atagcagcag ataaaagcat atctcatcgt tttgctattt tttcactttt aacccaaagt
    10921 gaaaataggg ctaaaaatta tcttttagct gaagatactt taaatactct gaaaataata
    10981 gaaaatttag gagctaaagt aaagcgagaa ggttctagtg taagtattat gccgcctagt
    11041 gagatacttt ctcctaattg tgttttagaa tgcggaaatt caggcactgc aatgcgcttg
    11101 atgataggat ttttagcggg tgtttcaggc ttttttgttt taagtggcga taaatatctt
    11161 aacaatcgcc ccatgaaaag aatttgtaaa cctttaagtg aaattggtgc aaaaatttac
    11221 ggcagagaac aagcaaattt agctccactt tgtatagaag gacaaaaact aaaagctttt
    11281 gattataaaa gtgaaatttc ttcagctcaa gttaaaacag ctatgatttt atctgctttt
    11341 agagcggata aaacttccaa atttagcgag atatctttaa gtagaaatca tagtgaaaac
    11401 atgctaaaag ctatgaatgc acctttaaaa atcagtgatg attatttaag ccttgaaatt
    11461 tctcctttaa atcaagcttt aaaagctcaa gatattctta tacctaacga tccttcttcg
    11521 gctttttatt ttgctttagc tgcgattatt ttacctaatt ctaaagtagt tttaaaaaat
    11581 attttactca atcctacacg tattgaggct tacaaaattt tgcaaaaaat gggtgcaaaa
    11641 cttgaaataa aaattacaca aaatgatttt gaaaccatag gcgaaattca tgcaagctca
    11701 agcgagttaa aagcagtaga agttaaagaa aatatagctt ggcttataga tgaagcaccc
    11761 gctttagcta tagcatttgc tttagcaaag ggtaaatcta aactcatcaa tgccaaagaa
    11821 cttcgggtaa aagaaagcga tagaattgct gctacggttg aaaatttaaa actttgtgga
    11881 gtaaatgcta aagaacttga agatggtttt gaaatcgaag gctctcaaat caaaaaagct
    11941 aaaataaaaa gctatgggga tcaccgtatt gccatgagtt ttgcgatttt aggcttactt
    12001 tgcggaatgg agattgatga aagtgagtgt attaaaactt cttttcctaa ctttatggat
    12061 attcttacaa aaataggagc taggattgat tattgaatta gctaaaaatt atggcttttg
    12121 ttttggtgta aaaagagcaa ttaaaaaagc tgaacaaatt aaagatgcgg caaccatagg
    12181 gccgcttatc cataataatg aagaaattgc tcgcttacaa aagaatttca atgttaaaac
    12241 cttagagaac ataagagctt taagtgatga aaaaaaagcc attataagaa cacatggaat
    12301 tactaagcaa gatttagaag agcttaaaaa gaaagatatt gaaatttttg atgcaacttg
    12361 tccttttgta accaaaccac agcaaatttg tgaacaaatg agtgcagaag gctacgatgt
    12421 ggtaattttt ggcgatgaaa atcatcctga agttaagggt gtaagaagct atgtagccac
    12481 aaaagcttat gtagttttag ataaaaaaga tcttgaaaat attaaattac ccaataaaat
    12541 agcagttgta agtcaaacta ctaaaaaacc tgaacatttt atggaaatag ttaatttttt
    12601 aattcttagg gttaaagaag taagagtttt taatacaatt tgtgacgcaa cttttaaaaa
    12661 tcaagatgct attaaagaac tttctgtcaa aagtgatgta atggtagttg tcggaggtaa
    12721 aaattcagcc aataccaaac aacttttttt aatagctaag gcaaactgcg aagatagcta
    12781 tttgatcgaa accgaagaag aattgcaaaa agaatggttt ttaaataaaa cacattgcgg
    12841 aattagcgct ggagctagta cgcctgattg gattattaaa aaagttatag ccaaaataga
    12901 atcgtttaag tgctaaaatt gtgatatttt attttttcaa aaagtaaata aaactacaat
    12961 ttaaaaaaat taataaaaat taaaattctt aacactaatt aaagaaaaat aaggtaaaat
    13021 cagtcaaatt ttaatttttt ttcaaaagga ccatgatgag cgaggtgaac aaaaaagttc
    13081 aaaacaattt agaggactat cttgaagatg aagactttgg gcagctttta gaagcttttg
    13141 acaagtcaag agaagaaact ataactgaag gtgtaatcgt agagattaaa aatgatgaag
    13201 tctatgtaga tataggcaga aaatcagaag gtattttagc attaaatgaa attcaagatg
    13261 aaaatgctaa tttgttattt aaagtaggtg atagcattaa agttgctgtt gtaggctctc
    13321 gtggtggtag atctttactt tctcacaaaa aagctttaag aaaagaaaaa gttatcgatt
    13381 ttattcaaaa ttataaagaa gatgatgagt atatttttga agtaaaagta gtaggaaaga
    13441 ataaaggcgg acttgttgtt gtaaatgatg atgatgtaga atttttctta ccaaaatcac
    13501 aatacggctt caaagaaaat aacaatctta taggtaaaac ttttaaggtt aaaatcatca
    13561 aagttgataa agaagagcaa agcattattg tatctagaaa gaaaacttta gatgatgaaa
    13621 gaaaaaaacg caaagaactt attaataata tcgctcagca agaagggctt atcgaaggtg
    13681 ttgtaaaaaa aattacaact tatggtatgt ttgttgatgt gggtggtgtt gatggacttg
    13741 ttcactatag tgaaatttca tataaaggac ctgtaaatcc tagtatttta tacaaagaag
    13801 gagataaagt tcctgtcaaa gtagtaaaat atgacaaaga tcgcaaacat ttatcccttt
    13861 ctatcaaagc ggctttacct gatccttggg gagaaattaa agacagctta gaagtgggtg
    13921 ataccattaa ggttattgtt tcaaatatag agccatatgg tgcttttgtt gatttgggta
    13981 acgatataga aggatttttg catattagcg aaatttcttg ggataaaaat ataaaaaatc
    14041 caaaagatta tattagcaag ggccaagaaa tcgatgttga agttattgaa atcaattcag
    14101 atgaaagacg cttaagagta tctttaagaa atttactttc taaacctttt gacgaattta
    14161 tgaaaaatca caaaattggt gatgtgatag aaggagaagt tacttcaacg acttcttttg
    14221 gtgcttttgt aaaaattggt tctgtagagg gtcttttgca taatgaagat gcatcttggg
    14281 acagaaatga aaaatgtaaa gataaattta acaatggtga tattatcaaa gttaagatta
    14341 tcaaaatcga cgaagagggt caaaaaattt ctttaagcat taaagaactt agcgaatcac
    14401 ctgttcaaga atatgctaaa aatcataaag taggcgatat cgttaaagga aaaattagag
    14461 atatcaaaga ttttggagta tttgtagaac tcaataaaaa tgtagatgcg cttattcata
    14521 aagaagatat tagtgcttca actcttgaga atttaaaaat tggtgatgaa attgaagctg
    14581 caattgcatt tatcgatgaa aagaaaaaca gaattcgcct aagtgttaag aatttggtta
    14641 gaattaaaga gcgagaagta ttaaatgaaa tcaatagcga cgataaagta actttaggtg
    14701 atatcattaa agatcagtta gcttaatgat gaaaaaatat gcaactataa gcattttgag
    14761 tattttatta ctcatcttgc ttattgtcgt ttttgtactg ctttggaaat ttaaagcaaa
    14821 ttctaacttt attcccgaat ttgctaaaga tacaaatacg catcagattg aagaaaggca
    14881 aacccaagaa ctcacttggc gagaagaatt agccaaatgg cctagtaaag attttactcc
    14941 agccgtagag caatttactc tacattttga tgcagatact agtgagctta aagaaaaaaa
    15001 caaatactat caacttgttg ttaataagca tgatatttac tccatgtttt gtttaagaca
    15061 gactttaaat tcttttaacg tgaagtattt tttattaaaa tccggcgaaa gtcctgaaat
    15121 ctttttagat acgggcaata aaaatttaat tgatgatatt atcaaagaac ttaaaaaata
    15181 taaaattaac acagaagcga aggagatttg gttatgaaaa aaaagattat tgtttgtgat
    15241 gcaattttag ataagggtgt agagctttta agaaaagctg aggatattga gcttatagaa
    15301 gctgctaaag ttccaaagaa tgagttaatg gatatgcttg cagatgtaga agtcgctatt
    15361 actagaagtt ctactgatgt agatgtcaat tttttaaatc atgctaaaaa actcaaagct
    15421 cttatacgcg caggagtagg ggtggataat gttgatatcc ctgaatgttc caaacgcggt
    15481 gttatagtaa tgaatgtccc aactgctaat accattgctg cagtagagct tactatggct
    15541 catcttctaa gttctgctag aagttttgtt aatgcacata attttttaaa gaatgaaaga
    15601 aaatgggaaa gagaaaagtg gtatggcgta gagctcatgg gtaaaacctt gggtgttatc
    15661 ggttttggaa atataggttc gcgtgtagcc atccgtgcca aagcttttgg tatgaaaatt
    15721 ctagcctacg atccatatat ttcagcttct aaaatcacag acttagatat ggagcaagca
    15781 aaaagtttgg atgaaattct tactcaaagc gattttatca ccatccatac gccaaaaact
    15841 aaagaaactg atggtatgat tggtgctaat gaaatcgcaa aaatgaaaga tggtataaga
    15901 cttattaatt gtgctcgcgg gggcttatat acagaagaag ctctatgcga aggcttaaaa
    15961 agtggtaaaa tagcttggct tggtatcgat gttttcaaaa aagaacctgc taccaaccat
    16021 cctcttttag attttgaaaa tgtttcagta acctctcatc ttggagctaa tactctagaa
    16081 agccaagaca atattgcaag agaagcttgt gaacaagccc taaatgcggc tagaggtgtg
    16141 gcatatccta atgctcttaa tttacctatt aaaactgagg atttaccacc ttttgtagca
    16201 ccttacatcg agcttgtttc taagatggca tttttagcag ttcaaattga taaaaatcct
    16261 ataaaaagta ttaaattaga agcagaaggg gtgataggcg aatatgctac ttcaatgctt
    16321 acatttgctg ctgtaggagc tttaagtgga attttaggtg aaaaaataaa ttatgttaat
    16381 gctgaatttg ttgccaaaga aaaaggtgta gatttatctt gcgaaaccct tccaaatagc
    16441 ggttataaca acaaacttag tgttaaaatc atcacagaga attcaaatat taatgtttca
    16501 ggaactgtat ttaatgaaaa tgaacaacgc atagttggat taaatggctt tcaaactgat
    16561 ttcaagccaa aaggaaaaat gattattttc aaaaataaag atatcccagg ggttattgct
    16621 aaaatcagct ctgtcttagc atctaaaaat atcaatatcg ctgattttag attgggtaga
    16681 gatggttttg gatatgcttt agcagtggta ttgatcgatg aaaaagtgca aaaagaagtt
    16741 ttagaagaat taagacaact agaggcgtgt atatttgtac aatatgtcga aatctaaaat
    16801 tcttatcata gaagatgata tagatttaaa tgatttgctt agtttaagac ttaaggcttg
    16861 cgattatcaa attttttcct tgttagattt taaaggagtt gaagatttgc tagatagtga
    16921 gcaaatcgat cttttgatag ttgatagaaa tcttccaagc ggggattctt tagataggat
    16981 taaagagcta agaaagcaag gttataaaga agcggtgatt tttctaaccg ctaaaacctt
    17041 gcatcaagat ttacttgaag gttttgagag tggctgcgat gattatatgt gcaaaccttt
    17101 tgattttaat gaattgttac ttcgtattaa agctatttta aaacgccaca aaagagaaga
    17161 agaaaagcta gtttttaaag atttttcttt ggatttgatc aattatgaat ttttctacaa
    17221 gaatgagaaa ttagatgttt caaatttgga atatgagctt ttaaaatgtt tttttgaaaa
    17281 tcccaatact ttattgacac gacaattttt aagtgaaaat gtatggaaag atgataccac
    17341 aagtgacaag acgatcaata tagcattaac aagactaaga aacaaatttc caaagcttaa
    17401 agagcatatt ataagcgtta ggggcattgg ttataagata tgttgaaaac taaaaatatt
    17461 tttataactt tttttgtttt gttgattttg tgttttggtg tgatatttta tacgcttaca
    17521 aattcttatt tgaatttttt actcttaaaa caatacgaac aaaaaatcaa aagccttgat
    17581 gatgttttaa a
//
LOCUS       DAQUWA010000039        17538 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.039, whole genome shotgun sequence.
ACCESSION   DAQUWA010000039 DAQUWA010000000
VERSION     DAQUWA010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17538
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.039"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..984)
                     /locus_tag="R8X70_001122"
     CDS             complement(<1..984)
                     /locus_tag="R8X70_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928904.1"
                     /translation="MVHEIQKTFLLPDATLLEKLQKDGIVFEIYEIETFYTKITYFYD
                     VKFQNLNGNFYKITRLNNPILEQNQEEKISKKDYEKARKKLIEKSIKKKRYEFKLCSF
                     KSFIDVYEDLNLYVLKVFFPTLEIANLFILPKEFRIQRELCGVLDSKNIILYGFNNLE
                     IDIEKCFKIIEKNQNFTLDFPSSILAFDGYRISLFYLFRKLKLYWNLALENRQREVFC
                     EFFSYARKIYIILMSTEEIFDEELNKNLALRFKDLVKKSHCILANNELGENLLLFLSG
                     EELQNLLSDFDFFIKEDSFYKSEQEKYFFKQMIAMQLRKRLVLFKKNLLKNF"
     gene            complement(1030..1440)
                     /gene="perR"
                     /locus_tag="R8X70_001123"
     CDS             complement(1030..1440)
                     /gene="perR"
                     /locus_tag="R8X70_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HEF2928905.1"
                     /translation="MELLQILKKHELKATPQRLCVLKILKRHEHPNIEELYEEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVANQKTCYDIYEERHIHIICNKCGNIEDMSFQD
                     AELDEYQEKLEKKMGNIIDHLAVCAHVSTCKKCH"
     gene            complement(1577..3454)
                     /locus_tag="R8X70_001124"
     CDS             complement(1577..3454)
                     /locus_tag="R8X70_001124"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEF2928906.1"
                     /translation="MNEIIKKDYQFAYTKEELEKLNLTQLEDLAARIREKIIDVVSKN
                     GGHLSSNLGAVELTIAMHTVFDNGIDPLIFDVSHQSYTHKLLSGKENVFESLRQFGGL
                     SGYTKPNDGDYFVAGHSSTSISLAVGACKAIALKGEKRTPVALIGDGALSAGMAYEAL
                     NELGDSKFPCVVILNDNEMSISKPIGAISKYLSQAMATQFYQNFKKRVAKMLDALPDS
                     ATYMAKRFEESFKLITPGLLFEELGLEYIGPIDGHNLSEVISALKQAKAMQKPCIVHA
                     QTLKGKGYSLAEGKNAKWHGVSAFDVDSGESVKKSDTKKSATEIFSKNLLDLASKYEN
                     IVGVTAAMPSGTGLDKLIEKYPNRFWDVGIAEQHAVTSMAAMAKEGFKPFIAIYSTFL
                     QRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGAFDVSFLAPLPNLTLIAPRDE
                     LMMKNIMEYAYTHEGCLAFRYPRGSFILDEEFNPTKIELGKAQWLVKNQSNIAFLGYG
                     QGVGKAWKVLRKLQDEGQNANLIDLIFAKPLDKLLLKELAKQSQIWFVFSENARIGGV
                     ASLLESFVQKNDLKIKIVSFEYEDSFIEHGKTNEVEKALKLDIDSLVQRVKINWVDNI
                     L"
     gene            complement(3447..4277)
                     /gene="fliH"
                     /locus_tag="R8X70_001125"
     CDS             complement(3447..4277)
                     /gene="fliH"
                     /locus_tag="R8X70_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HEF2928907.1"
                     /translation="MVNRSNVISGGTSDQHVVEGYRFKVISEFDNHAEEKQHSQISNE
                     ENITTSSKDESPVEESQTPAPSQVVQEVQTPAFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELESAKEKFSKEGYEQARAEFEKELNDLRDKYLKSVSKLEEACV
                     NLNAFIEKNEKELADTAIDIAKEVILKELENNSSKIAYALAKDLINELKGAGSIEIKV
                     NSIDYNYLKEHFSENSHIKITLDDAISKGSVIILSDSGNIESNLNARLIKIKKMVNNE
                     "
     gene            complement(4285..5313)
                     /gene="fliG"
                     /locus_tag="R8X70_001126"
     CDS             complement(4285..5313)
                     /gene="fliG"
                     /locus_tag="R8X70_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEF2928908.1"
                     /translation="MIKLSEEQKMLYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRAVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            complement(5313..6995)
                     /gene="fliF"
                     /locus_tag="R8X70_001127"
     CDS             complement(5313..6995)
                     /gene="fliF"
                     /locus_tag="R8X70_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HEF2928909.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRG
                     SGSGANNGYAVLVDNVDPSSSAAIVAKLEQNNVPYILESESKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQSFGATNEEQRVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAIPKLTKENVRISDQSG
                     VPLDEQEAYEDDLVRAQIKYKSDQERALEDKIIETLAPYAGGTDKVRVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKEPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATIVRTSAAVTIDGKYQDVVDENGDVKSEYVPLSKEE
                     LASVESIVKNTINYSANRGDSVVVQNLPFHRESIRVESKVKTFYGRFIEPFIPPVKYI
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEVQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGENFNEDSIQYEVLLEKLRGLVSDKSEEIAALLQNLIQNDTEFGEKDM"
     gene            complement(7079..8173)
                     /locus_tag="R8X70_001128"
     CDS             complement(7079..8173)
                     /locus_tag="R8X70_001128"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEF2928910.1"
                     /translation="MKFNDFLNHLSNYEPGKDIEVIAREYGIKEVIKLASNENPFGAP
                     PKAVKVLQENAFKANLYPDDSMVELKGELAQKYNVKNENIIIGAGSDQVIEFAIHSKL
                     NPQNAFLQAGVSFAMYEIYAKQCGAKCYKTQSITHDLSEFKTLYEAHKDEIEIIFLCL
                     PNNPLGECLDTNEVFEFIRGIDENCLVIIDAAYNEFASFKDQNKYLKPCDLVQEFKNV
                     LYLGTFSKLYGLGGLRIGYGIANAEIISAFYKLRAPFNVSNLALKAAVAALHDEEFAK
                     KTLENNFSQMELYKEFAKKHHIKFIESYTNFITYFFEEKNSTDLSEKLLKKGIIVRNL
                     KSYGLNAMRITIGTPYENERFFTEFEGILK"
     gene            complement(8160..9242)
                     /gene="pheA"
                     /locus_tag="R8X70_001129"
     CDS             complement(8160..9242)
                     /gene="pheA"
                     /locus_tag="R8X70_001129"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEF2928911.1"
                     /translation="MSNLNLEDFRNKIDMVDDKILELLNERMSYVKSIGEIKQTSGGA
                     IYRPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQIVAYLGPEGTYTH
                     QAARSRFGAMSRYIALATIEDVFKELSNKEAKYGVVPIENNTEGAVGVTLDCLGKYNE
                     LKIFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSNIEFVPSKST
                     ANAAYLASQDKYSAAICSKIAAKLYNVPVLFDKIEDNAANRTRFLILSDIKNPKMPNC
                     KTSILAHTAHKPGGLSSLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDEN
                     VQRALKNADEVVWLGSYLSGEKNEIQ"
     gene            complement(9230..9997)
                     /locus_tag="R8X70_001130"
     CDS             complement(9230..9997)
                     /locus_tag="R8X70_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HEF2928912.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLAIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFATMIELARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIVSDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGFDTDLLDGVYPSVLEILKDLKCQI"
     gene            complement(9999..11207)
                     /gene="lysA"
                     /locus_tag="R8X70_001131"
     CDS             complement(9999..11207)
                     /gene="lysA"
                     /locus_tag="R8X70_001131"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEF2928913.1"
                     /translation="MDYKKLKDEFQTPFYIYDFDFIKERFLKLKNAFKARKSQIFYAV
                     KANSNLSLLQMLVKLDSGFDCVSIGEVKRALKAGAKSYKIIFSGVGKTQEELRLALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPIGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKF
                     FDIGGGLGVRYEKEDVEPDLYDYAQGILAQLHGLDVTIGMEPGRFLVANSGEFVCSVL
                     YEKHNKTKRFVIADGAMNDLIRPSLYEAYHEILLPYNQGEESPCDVVGGICESGDFFA
                     KARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            complement(11249..12307)
                     /locus_tag="R8X70_001132"
     CDS             complement(11249..12307)
                     /locus_tag="R8X70_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEF2928914.1"
                     /translation="MWIFFRFISGIYLKNFFIIFLSLLGFYCGIDLLLNFNDLPDAAN
                     LSLLYVIFLAFSAVTYVLPVSLIFALVLSLVSMIRANEFVSLYALGLSKNLVIIFPFL
                     WALFFCFVYVGLNFTPFAYANDYKRNILKNGTMLKQSGEVFLKFNNEFIYISKVNNGQ
                     STAQNIKIFNIKDLNLSSFIEAKSGIFEKKNWILKEGNLTLLPKEYELGNKGLNISEF
                     KELNTLEGFKPKIIEGVASDSDYSILDILESLELFKTQNISIESLKISLYKLVFMPFF
                     APFLMLIMYYFFPVIARFFNLAFVAFVAFVVTLLTWGMLFLLSRLSENGVILSELGIV
                     MPIVLLIFLGGFMFYKHR"
     gene            complement(12309..12851)
                     /locus_tag="R8X70_001133"
     CDS             complement(12309..12851)
                     /locus_tag="R8X70_001133"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEF2928915.1"
                     /translation="MILVVGLGNIGKEYEDTRHNVGFMLIDLLLKEGNFTNLTNSKFK
                     GELFKMGSSLLLKPHTYMNNSGLSVKAVNDFYKCERIIVVHDDIDINLGALRFKRGGS
                     SGGHNGLKSIDNLCGSDYERVRIGVGKGENVISHVLGKFRAEEELILSKVLEHSKKAL
                     LELIRNDDLSAISSKYSLKA"
     gene            complement(12848..13384)
                     /locus_tag="R8X70_001134"
     CDS             complement(12848..13384)
                     /locus_tag="R8X70_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEF2928916.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            13518..13856
                     /locus_tag="R8X70_001135"
     CDS             13518..13856
                     /locus_tag="R8X70_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEF2928917.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWHYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIVKLVLIAILLLSI
                     IALKWVSKEA"
     gene            13859..14173
                     /locus_tag="R8X70_001136"
     CDS             13859..14173
                     /locus_tag="R8X70_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEF2928918.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKCFLKLFLIAVIITCTAGLKF
                     LS"
     gene            14183..14788
                     /locus_tag="R8X70_001137"
     CDS             14183..14788
                     /locus_tag="R8X70_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HEF2928919.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKSLDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(14775..16058)
                     /locus_tag="R8X70_001138"
     CDS             complement(14775..16058)
                     /locus_tag="R8X70_001138"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEF2928920.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKIANAIKKQVDELEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGVKKSKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYQAGFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            16125..17267
                     /locus_tag="R8X70_001139"
     CDS             16125..17267
                     /locus_tag="R8X70_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HEF2928921.1"
                     /translation="MSLKNILETLEKNHNLRKLTSLKHEGNFVFKEGKKLLNLAGNDY
                     LNLSFCKSLKDEFLDNIKEQDLFFSSSSSRSLSGNFTIYEELESFLKSKFKEKEILHF
                     NSGYHLNISCIAALASIPNTLFLADKFIHASMIDGLKLGGAKFFRFYHNDMNHLENLI
                     QKHYDHYENIIILSEALFSMDGDFSDFNTLIAFKEKYPKIKLYIDEAHSVGCFNEEGL
                     GLVKALNLEEKVDFIVFTFGKALASMGACMICNNLYKSFFINKARAFIYSTALPPINI
                     AWTKFIFEKMSELKEKREKLQIIGNFFKNQLIEKSHQILGDAYIISLVLGENQKAIEL
                     AKKLEVNGIFAPAIKEPTVPKNTARIRFSLHAGLSKEDLKKVVELL"
     gene            17264..>17538
                     /locus_tag="R8X70_001140"
     CDS             17264..>17538
                     /locus_tag="R8X70_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEF2928922.1"
                     /translation="MKISNLIQNQNSQELILVFGGFASHPSHFAHLKSDKNVVLVYDY
                     ENLDFKFDLNSFSKITLIAFSMGVCVASRVLKNIEFSQKIAINGTPFG"
BASE COUNT         5735 a         3200 c         2378 g         6225 t
ORIGIN      
        1 aaaatttttc aataaatttt tcttaaacaa tacaagtctt tttcttaact gcatggcaat
       61 catttgctta aaaaaatatt tttcttgctc gctcttatag aatgaatctt ctttgataaa
      121 aaaatcaaaa tcactcaata aattttgcaa ttcttcgcca cttaaaaata aaagtagatt
      181 ttcacctagt tcattatttg ccaaaataca atgagatttt ttcactaagt ctttgaatct
      241 aagagctaaa tttttattta actcctcatc aaaaatttct tctgtactca ttaagataat
      301 gtaaatcttt ctcgcataag aaaaaaattc acaaaaaacc tctctttgtc ggttttctaa
      361 agctaaattc caatataatt ttaattttct aaatagataa aataaggaaa ttctatatcc
      421 atcaaaagct aaaatagaac ttggaaaatc tagggtaaag ttttgatttt tttctataat
      481 tttaaaacat ttttctatgt ctatctctaa attattaaaa ccataaagta ttatattttt
      541 agaatccaaa actccacaaa gctctctttg aattctaaat tctttaggca gtataaaaag
      601 atttgctatc tctaaagtcg gaaaaaaaac ctttaaaaca tatagattaa gatcttcata
      661 tacatcaata aagcttttaa aagaacaaag tttaaattca tagcgttttt tcttgatgct
      721 tttttctatg agttttttac gggctttttc ataatccttt ttagaaatct tttcttcttg
      781 attttgctct aaaatcgggt tatttaatcg ggttatttta taaaaatttc catttaaatt
      841 ttgaaatttt acatcataaa aatatgttat cttagtatag aatgtttcaa tttcataaat
      901 ttcaaaaaca attccatctt tttgtaattt ttctaaaaga gtagcatcag gaagtaaaaa
      961 agtcttctga atttcatgaa ccattaaaat aacccttaaa ttctttgggt tattttaact
     1021 ttattttgct taatggcact ttttacaagt gctaacatga gcacaaactg ctaaatgatc
     1081 gatgatattt cccatttttt tctctaattt ttcttgatat tcatcaagtt cagcatcttg
     1141 aaaactcata tcttcgatat tgccacattt gttgcaaatt atatgtatat gtctttcttc
     1201 atagatatca taacaagttt tttgatttgc tacattgatt tctacaacta agccttgttc
     1261 ttgtaaagtg ttaagatttt tataaactgt agcaagagaa atggaagggt attctttttt
     1321 gatttcctca taaagctctt cgatatttgg atgttcatgt ctttttaaaa tttttaaaac
     1381 acacaatctt tgtggggttg ccttcaattc atgtttttta agtatttgta acaattccat
     1441 tcttttatcc tagttctttt taactaggaa taataataaa ttttttatta aaaaaagttt
     1501 atatcaaatg atatttttta ttagataata agaagctatg aaattttaaa catttttttg
     1561 ttgttttggt tcaaatttaa aggatgttat cgacccaatt tatttttacc ctttgcacca
     1621 aactatcaat gtcaagtttt aaagcttttt ctacttcatt ggttttgccg tgctcaataa
     1681 aactatcttc atattcaaaa gaaacaattt taatttttaa atcattcttc tgtacaaagc
     1741 tctctaataa actcgctacg ccacctattc ttgcattttc gctaaaaaca aaccaaattt
     1801 gactctgttt tgctaactct tttaaaagta gtttatctaa gggtttagca aaaatcaaat
     1861 caatcaaatt agcattttgc ccctcatctt gcaattttct taaaaccttc caagccttac
     1921 ccaccccttg tccataacct aaaaaagcga tattgctttg attttttaca agccattgcg
     1981 cctttccaag ttctatcttg gtagggttaa attcctcatc taaaataaaa gatcctctag
     2041 gataacgaaa agccaaacat ccctcatggg tataagcata ctccataata tttttcatca
     2101 taagctcatc tcttggagct ataagggtta aattaggcaa gggagctaaa aaacttacat
     2161 caaaagctcc ttggtgggtc tctccatctt ctcctactat acctgcccta tccatagcaa
     2221 aaaccacatt taaattcata atcgcacaat catggataac ttgatcgtaa gcgcgttgta
     2281 aaaaagtgct gtatatagca ataaaaggtt taaatccttc tttagccata gccgccatag
     2341 aagtaacagc gtgctgctca gcaataccca catcccaaaa acgatttgga tatttttcta
     2401 taagcttatc aagacctgtt ccacttggca tagccgccgt aactccaaca atattttcat
     2461 attttgaggc taaatcaagc aaattcttag aaaaaatttc agtagcagat tttttagtat
     2521 cacttttttt aacactctct ccactatcta catcaaaagc actgacccca tgccatttag
     2581 cattttttcc ttcggctaaa ctataacctt ttccttttaa agtttgcgca tgaacaatac
     2641 aaggtttttg catagccttt gcttgtttta atgcagaaat aacctcactt aaattatgtc
     2701 catcaatagg tcctatatat tcaagaccca attcttcaaa taagagtcct ggggttatta
     2761 atttaaagct ttcttcaaaa cgcttagcca tataagtagc agaatcaggt aatgcatcta
     2821 acattttagc cacgcgtttt ttgaaatttt gataaaactg cgttgccatg gcttgagaga
     2881 ggtattttga aattgcacct atgggttttg aaatactcat ttcattatca tttaagataa
     2941 ctacacaagg aaatttagaa tctcctaatt cattcaaggc ctcataagcc atacctgcac
     3001 ttagagctcc atcgcctatc aaagctacag gagtgcgttt ttcgcctttt agtgctatgg
     3061 ccttacaggc tcctacagct aaagaaatag aagtacttga gtgtcctgct acaaaataat
     3121 ccccgtcatt aggcttggta tacccactaa gcccaccaaa ttgacgcaaa gactcaaaaa
     3181 cattttcttt tccacttaaa agcttatgtg tgtaagattg atgggataca tcaaatataa
     3241 gaggatctat cccattatca aataccgtgt gcatagctat agtaagctca actgctccca
     3301 aattggagct taaatgccct ccatttttac ttactacatc aataattttt tctctaatgc
     3361 gagccgctaa atcttcaagc tgggttaaat ttagcttttc taactcttct ttagtataag
     3421 caaattgata atctttttta attatttcat tcattattaa ccattttttt gattttaata
     3481 agacgcgcat tcaaattgga ttctatattg ccactatcgc ttaaaatgat aacactaccc
     3541 ttgctaatag catcatcaag agtgatttta atatgagaat tctcactaaa atgctctttt
     3601 agataattat aatctataga atttactttt atttcaatag aacctgctcc tttaagctca
     3661 ttgatgagat ctttagctaa agcataagca attttgcttg agttattttc aagctctttt
     3721 aaaataacct ctttggcaat atctatagct gtatcagcaa gttctttttc atttttttca
     3781 ataaaagcat taagatttac acaagcttct tctaactttg aaacactttt taaatactta
     3841 tcgcgcaagt catttaattc tttttcaaat tcagctctag cctgttcata accctcttta
     3901 gaaaattttt ccttagcgct ttcaagctct gaatttaagc ggttattaaa ctcattttct
     3961 tgactttcaa tttgcatttg aagcttaatg atattgcttg acatttcatc tgttttttta
     4021 agcaaatcct caacaaaact aggttgaaat gcaggagttt gcacctcttg tactacttga
     4081 gagggtgcgg gggtttgact ttcttcgaca ggactttcat cttttgaaga tgtagttata
     4141 ttttcttcat ttgaaatctg tgaatgctgc ttctcttctg catggttatc aaattctgaa
     4201 attaccttaa aacgatatcc ttcaacaaca tgttgatcag aagttcctcc tgaaataaca
     4261 ttgctacgat taaccatcac tcacctactc tatcatttca tcagcatcgc ctgtttgtac
     4321 aagtccttgc tctgcaagtt tttgcaccac ttcaaccact tttctttggg catcttcaac
     4381 atctttaaca cgcacagcac ccaaaaagcc catttcttca aggaaggctt cacttgcacg
     4441 cgtagacata ttggctaaga atttttgctt taattcttcg cttgcaccct ttaaacctat
     4501 cattaaatcg cgcttatctg caacttttaa aatttctctt atagcttgag tgctaagttt
     4561 ttgtatatca tcaaaagtaa acatcaattc tttaatcgtt tcagccaaac gttcatcgct
     4621 ttgttcgatg taagtaatgg tagatttgct tgctttttgt cctaagcgat taagtacttc
     4681 tgcaactgct cttgggcctc ccacttcaac cttataagaa gtaagacttt cgagtttgct
     4741 ttcaagtact gcagacactc ttttaatgat acttggagaa atatcaccta gatttgccat
     4801 tcttataaca acctcagctc ttaactcatc actaaaatac tctaaagttt ctgccgcatg
     4861 aattgaatcc atatgagcta aaataagtgc aatggtttgc gggtgttcct tagtgatgaa
     4921 gtcagcaagt tgttgaggtt taatctgagc caaataagca aagttttggt tattctccat
     4981 acttttggta agtttttcaa gaattttatt ggcaatttct ggaccaaaag tacggaaaag
     5041 tatttcttta gcgtattcca aaccaccgct tttaatgtat tgattagatt gaagcagggt
     5101 ataaaattct tccaaaaccg cagtagctac agcgcggtca acattttttg ccatagcaat
     5161 atagcgtgaa atttcggtaa taacatcaat ttccatatgt gaaaaaactg aagtcgttgc
     5221 atcctcgcca agttgtatga gaaatatcgc taccttttca ggcatcgata aatcatcata
     5281 gagcattttt tgttcttcgc taagttttat catcacatat ccttttcgcc gaattcggta
     5341 tcattttgga ttaagttttg caaaagtgct gcaatttctt cgcttttatc acttactaag
     5401 cctcttaatt tttcaagtaa aacttcatat tggatagaat cctcattgaa attctcccca
     5461 aaaccaagct gctcttcaac ctttttccta gctgcattaa atttctctaa cgcatcctca
     5521 gcatcatcta aaacagcatt tggaccttgc tgcacttcct cttgtgctgc aacatcttca
     5581 agcatttttt gcgtaaatgg agcaataact tttttgtaaa aaataaaaag caaaatagcc
     5641 gcaataatat atttaaccgg tgggataaat ggctcgataa aacggccata gaaagtttta
     5701 accttgcttt ctactctaat agactcacga tggaaaggta aattctgcac gactacacta
     5761 tcccctctat tagcactata attaatagta tttttaacta tgctttctac acttgcaagc
     5821 tcttctttac ttaaaggaac atattcactt tttacatctc cattttcatc cacaacatct
     5881 tgatattttc catctattgt tactgctgct gaagtacgca caatggttgc aaattgtttt
     5941 tttgtatttg ttatagtttt tgaaagctca ttgtttgtag taacttgatt tttcttatag
     6001 gtatcaattt gtcctttatt atcaagtcct tctactggac ctatatttga aaccgcacct
     6061 ggcacacctt gaatttcagg ctcttttctg cctgttcttt cttcattaag agtttgctca
     6121 cttcgaacta tagggtttgg atcataaatt tcactttggg attcttgctt agaaaagtca
     6181 aaatctatat tgacacttac ccttacttta tctgtgcctc ctgcataagg agctagggtt
     6241 tctatgattt tatcttctaa agctctttct tgatcgcttt tatatttaat ttgagcacga
     6301 accaaatcat cttcataagc ttcttgctca tctaaaggca caccactttg atcactaatt
     6361 cttacatttt ctttggttaa tttcggaata gcagctgaaa ctatattttt aatcccatcg
     6421 atttgttttc tagtaagttt taatccctcg cgcacattta caacgactga agctgtagga
     6481 ggaatttgtc tttcggtaaa aacactgtct tttggaaagg ctatatgcac taccgcactg
     6541 cgtataggct ctagagtttc aatcgttctt gcaagctctc cttctatagc tctttgatac
     6601 tttactcttt gttcttcatt tgtagctcca aaactttgcg tatcaaaagc ttcaaaaccc
     6661 acgcgactat cttttatcaa tccttcgcta gcgataaaca ttctttgacg atatacctga
     6721 tcttgtggaa ctaaaatttt actttcgctt tctagtatat aaggtacatt attttgttca
     6781 agtttagcta caatagctgc agaagaactt ggatcaacat tatcaactaa aacagcatag
     6841 ccattattag caccactgcc acttccacga aatagtgcca aaaataccaa aaatccaaca
     6901 accacaacga tagaagctgc gataactata cgttgctttc gagtcaaatt ttgataaagc
     6961 tgtccaattt ggtgaagcat atttttaaaa tccattaatt ctcatccctt agtttagtga
     7021 atcttaccca ttttattcta aataccataa aaattatcct tgatttgaaa aatcaagact
     7081 attttaaaat tccttcaaat tctgtaaaaa atctttcatt ttcataaggc gttcctatgg
     7141 taattctcat agcatttaaa ccataacttt ttaaatttct tactattata ccctttttaa
     7201 gcaatttttc agacaaatct gtgctatttt tttcctcaaa aaaataagtg ataaaatttg
     7261 tatagctttc gataaattta atatgatgct ttttggcaaa ttccttataa agctccattt
     7321 gagaaaaatt attttccaaa gtttttttag caaattcttc atcatgtaaa gccgcaaccg
     7381 ctgcttttaa tgctaaattg cttacattaa aaggggcgcg aagtttataa aatgcactga
     7441 taatttctgc atttgctata ccataaccta tacgcaaccc acccaatcca taaagtttag
     7501 aaaaagttcc taaataaagc acatttttaa attcttgcac aagatcacaa ggctttagat
     7561 acttattttg atccttaaaa cttgcaaatt cattataagc tgcatcaatt atcactaaac
     7621 aattctcatc aataccgcgt ataaactcaa acacctcgtt tgtatctaag cactcgccca
     7681 aaggattgtt aggcaaacat aagaatatga tctcaatctc atccttatgt gcttcataaa
     7741 gtgttttaaa ttcagataaa tcatgagtga tactttgagt tttatagcat tttgcaccgc
     7801 attgcttagc ataaatttca tacatagcaa agcttacccc tgcttgcaaa aaagcatttt
     7861 gagggttaag tttagaatgt atagcaaatt caataacctg atcgctgccc gcaccaatga
     7921 tgatattttc attttttaca ttgtattttt gtgctaactc accttttagc tctaccatac
     7981 tatcatctgg ataaagattt gctttaaaag cattttcttg caaaacttta accgctttag
     8041 gtggagcacc aaaagggttt tcattgcttg ctaattttat cacttctttt atgccatatt
     8101 ctctagcgat aacttcaata tccttgcccg gctcataatt gcttaaatga tttaaaaagt
     8161 cattgaattt cattcttttc tcctgataaa taagatccaa gccaaactac ctcatctgcg
     8221 tttttcaaag cgcgttgaac attttcatca tcaatatgcc cttcaaaatc tatgtaaaaa
     8281 ctgtgtaaaa attcttttga ttttacagga cgagattcaa gcttagtaag attgatattt
     8341 tcttttttaa attgctccag taaagaacta agaccgccag gcttatgtgc agtgtgagct
     8401 aaaatagaag ttttgcaatt tggcattttt ggatttttaa tatcacttaa aatcaaaaat
     8461 cttgtacgat ttgccgcatt atcttctatc ttatcaaaaa gtacaggcac attgtaaagc
     8521 tttgcagcta ttttagaaca aattgcagcc gaatacttat cttgagaggc taaataagca
     8581 gcatttgctg tggattttga aggcacaaat tctatattgc ttaattcgtg gctttctaaa
     8641 aatttgcgac attgattata accttgtggg tgggaataaa tgcgttttat ctcttttaaa
     8701 ttttcattaa ttcctacaaa agaatgatga atatccatat aaatttcacc aaaaatttta
     8761 agctcattat acttacctaa gcaatctaaa gttacaccta cagcgccttc tgtattattt
     8821 tctataggaa caacgccgta ttttgcttct ttattgctaa gctctttaaa aacatcctct
     8881 atggttgcaa gtgcgatata gcgactcata gcaccaaaac gacttcttgc tgcttgatga
     8941 gtataagtac cttcaggccc caaataagca acaatttgag gcatttctaa attccttgaa
     9001 acagcaaaaa tttcttgata aattgcctct atggcatttt gatccaaaag tcctaaattt
     9061 gcatttttta agcgattgat aatcgctctt tcacgttcag gacgataaat cgctccacca
     9121 cttgtttgct tgatctctcc tatgctttta acataactca ttctttcatt taaaagttct
     9181 aaaattttat catctaccat atcgatttta tttctaaaat cttctaagtt taaatttgac
     9241 atttcaaatc ctttaaaatt tctaaaacac taggataaac tccatcaagc aaatccgtat
     9301 caaacccttt tgtgtcgctt atctttccgc ttaaaaccag caaggttttc atgccaagtt
     9361 cttttgcctt aagcaagtca cccctaaaat catcactaac gattttaata tcttcaaaat
     9421 cgatttttga attttgtctt cttattaaat ttaaagcttc tttataaaaa gcaatgctag
     9481 gcttacccac aacctcatat tcaaaatcaa tagcattttt aagcatagcc ataatgctac
     9541 ctacaccagg ataaggccta ccatcttttt tataaatact agtttcgtgc atagctataa
     9601 atctaacttc tcttctagcc aattctatca tagtggcaaa atctttaaat ttaaaatcat
     9661 cataactagc cacaagcaca gcactaggat ttacaaaatc gagctcaaaa ccaagatttt
     9721 caagactttt tacaaactca tctgcaccaa aagccgcaac tttacaaggt cttaaaaggt
     9781 gttttaaaac gctgaaagga tcaatataag cattttcttt tatagccaat cctttttgct
     9841 gtaatttttc taaaaaatca agtttttttg tattgttagt gatgataaga taaggaagat
     9901 tttttgcatt taaaaaatcg atcagttctt tagcaccatg gattaaagat ttatcatgat
     9961 cagaaattaa agtcccttga acatctaaaa aaaacatttt aagcctttaa aaatttctct
    10021 tctaaagcga tttgatcttc aaaattttct ctttgacgga tcaatcttac ctgtccttct
    10081 tcaagggcta attcgcaaac tttattacga gtattgtaat tactactcat gctaaaacca
    10141 taagctccag tatttttaat aaccattata tcaccacttt gagtgctagg caaagacctt
    10201 gccttggcaa aaaaatctcc actttcacaa attccaccca caacatcgca aggactttct
    10261 tctccttgat tataaggcag taaaatttca tgataagctt catacaaact tgggcgaatt
    10321 aaatcattca tagccccatc tgctataaca aaacgctttg ttttattgtg tttttcataa
    10381 agcacagagc atacaaattc tccactattg gcaaccaaaa atcttcctgg ctccattcct
    10441 atagttacat ccagtccgtg tagttgagca agtattcctt gtgcataatc ataaagatca
    10501 ggctctacat cttctttttc ataccttact ccaagtccac cgcctatatc aaaaaattta
    10561 agatcgattt gcaaggcttt taactctctt acaagttttg caacgatgcc tgctgcttca
    10621 tgaatgggag aaatatctaa aagttgcgaa cctatatgaa aatgcactcc aataggctct
    10681 aaaaaagatg aattttttgc ataaagatac atttttcttg ctatatcaat ttcgacacca
    10741 aatttatttt catttaatcc tgtagaaata taaggatgag tttttgcatc aacatttgga
    10801 ttaacacgaa tacttatcct tgcctttaaa tttaactctt tagctacact ttctaaaagc
    10861 atcatttcag cttcgctttc aagattgata tataaaatat cgtattctaa agcaagtctt
    10921 aattcttctt gagtttttcc tacgccacta aaaattatct tataagattt tgcacctgct
    10981 tttaaagcgc gtttaacctc tcctatgctt acacaatcaa acccgctgtc aagctttaca
    11041 agcatttgta aaagacttaa atttgagttt gcttttaccg cataaaaaat ttgagatttt
    11101 ctagctttaa aagcattttt aagctttaaa aaacgctctt taataaaatc aaaatcataa
    11161 atataaaaag gggtttgaaa ttcatctttg agttttttat aatccatttt tcacctttat
    11221 ttttaatttt actatattaa agcttaattt atcggtgctt gtaaaacata aaaccaccta
    11281 aaaaaattaa caaaacaata ggcataacaa tgcctaattc acttaaaatc acaccatttt
    11341 cgctcaatct tgatagtaaa aataacatac cccaagtaag caaagtgact acaaaagcta
    11401 caaaagctac aaaagctaaa ttaaaaaatc ttgcaataac tgggaaaaaa taatacataa
    11461 taagcattaa aaagggtgca aaaaacggca taaatacaag cttataaaga ctaattttaa
    11521 gcgattctat gctgatattt tgtgttttaa aaagctccaa actttcaagt atatctaaga
    11581 tagaataatc actatcacta gctacccctt cgatgatctt aggcttaaaa ccttcaagag
    11641 tattaagctc tttaaattcg ctgatattta accccttatt gccaagctca tattctttag
    11701 gaagtagggt taaatttcct tcttttaaaa tccaattttt cttttcaaaa ataccgctct
    11761 tagcttcgat aaaagaactt aaatttaaat ccttaatatt aaaaatttta atattttgtg
    11821 cggtactttg tccattatta accttagaaa tataaataaa ttcgttatta aattttaaaa
    11881 aaacttcacc gctttgtttt agcatggtgc cattttttag aatatttctt ttataatcat
    11941 ttgcataagc aaaaggagta aaatttaacc ccacatacac aaaacaaaaa aataaagccc
    12001 acaaaaaagg aaatattatg accaaatttt tactaagccc taaagcataa aggcttacaa
    12061 attcattagc ccttatcata gaaaccaaag aaagcaccaa agcaaagatt aaagaaacag
    12121 gcaagacata agtaacagca gaaaaagcca aaaaaatcac ataaagcaag ctaagatttg
    12181 ctgcatcggg taaatcattg aaatttaaaa gcaaatcaat accacaataa aaacccagta
    12241 aagacagaaa gataataaaa aaattcttaa gataaattcc tgaaataaaa cgaaaaaata
    12301 tccacatctt aagcctttaa gctatacttt gaagatatgg ctgataaatc atcattgcgg
    12361 ataagctcaa gtaaagcttt tttagaatgc tctaaaacct tacttaaaat taactcttct
    12421 tcggctctaa atttacctaa aacatgagaa ataacattct cacccttgcc cactcctata
    12481 cgcactcttt cataatcact tccgcataga ttatctatgc ttttaagtcc attatgtcct
    12541 ccgctagaac cgcctctttt aaaacgcaaa gcgcctaaat tgatatcgat atcatcatga
    12601 acgactatga ttctttcaca tttgtaaaaa tcatttaccg cttttacgct taatccagaa
    12661 ttattcatat aagtatgagg tttaagaagt aaagaagagc ccattttgaa aagctctcct
    12721 ttgaattttg agtttgtgag atttgtgaaa ttgccttctt ttaaaagcaa gtcaataagc
    12781 ataaagccga cattatggcg agtatcttca tactctttgc ctatattgcc aagccctacg
    12841 actaagatca tctagctttt tctacgccca ctaccgctac tctatcagca tctatcatag
    12901 ttactcccgc aggaactaca atatcacgaa caagtaaagc atcacccaca tcaagcttac
    12961 ttacatcaag ttcgaagaaa tttggtaaat tttcagctgc acattttact tttaatcttc
    13021 tttttgattg gattaaaaca cctttatttt taagacctat agctgttcct gtaattttaa
    13081 ctggaaccat gtatttagaa atcacacctt tttgtgcaac ttttaaatcc acatgtttaa
    13141 gttctgcagt tacaggatct ttttgataat ctacaactac aacgcttaaa gtttgagaac
    13201 ctacttttac atcaaaaatt aaagtagttt ttttacgaac ttccttaata aactcattta
    13261 ctttaaaagc ggcattgatg ttttctaatc cttttccata gatgtttgcg attagataac
    13321 catctctttt taaagcttta gcagcttttc taccgatact ctctctaacg atgccttcta
    13381 acatcttttg tcctttctta aaaaatgagc tttgattata tctaattttg gcttatggaa
    13441 aagtaaattt atagcttctt ttaatttctt taagatataa tttgttttac aaatattatg
    13501 ttaatttaag gcttcatgtg aatgaaaaat tcaatattaa tatagcttgg tttttaataa
    13561 tcttaggtgg gattatagaa tgtttttggg tcagtgggct taagtattct acagaaattt
    13621 ggcactatat tttaacagcc attggggttt gtatttcttt tacttgtttt ttaaaagctt
    13681 gtgaaagact tgaagtaagc attacttata gtgtttttgt aggcattggc actatcggag
    13741 tggttttaaa tgaaatgttt atttttaatg aggctgtttc tatagttaaa cttgtactta
    13801 tagcgatttt acttttaagc attatagccc ttaaatgggt aagtaaggaa gcttaaatat
    13861 ggaatggttt tatttgtttt tagctactgc ttgtgaaatt tttggcgtgg tgatcatgaa
    13921 agaacttgta agcactaaaa ataagcttta ccttttagct ttgatagtgt gttttggatt
    13981 ttcttttact tttttaagct taagtatgca aaatatcgct atgagcgttg cttatgctat
    14041 atggacagga gctggaaccg ctggtggggt aatgatagga gtgctttttt ataaagaaag
    14101 taaatgtttt ttgaaacttt ttttaatcgc tgtgattatt acttgtacag cgggtttaaa
    14161 atttctttct tgaggatttt ttgtgcaaat ttatgtaagt ggaatacata ctgatgtagg
    14221 aaaaacacat tttagcgcag ctttttgtgc gaattttaac tatgattatt ttaaactcat
    14281 tcaagcagga actccaacag atagtgagtt tattgcaaaa tttagcccaa aaacaaagat
    14341 ttttaaagaa ggtatttttt tgcaaactcc agcttctcct catcttggaa aaatcaaaga
    14401 aaagcttgat tataaatcct tagatatcat tttaccaaaa agcaaaaacc tacttattga
    14461 gcttgcgggt gggctttttt ctcctatgga tgaaaattac actatgattg attttgtgaa
    14521 tattttcaaa caccctacga ttttggtagc aaaatactat cttggaagta ttaatcatat
    14581 cttgcttagc attgaagctt taaagcaaag aaatatcaat cttttggccc ttgtaatgat
    14641 gggtaaaaaa gatatcttac aagatgattt tataaaaaat tatgcaaaaa ttcctataat
    14701 caatcttgat ttttttgatg aaaatagcat tttaaataaa gattttaaag agcaaatgca
    14761 agaaatttta caacttaaaa ttccttaaaa atctgctcta aactctctag tacataaacg
    14821 atttgttctt ttgtgatgat gtaaggaggc ataaaataaa tcgtatttgc taaaggtctt
    14881 aaaagcaaac ctttttctaa ggctttttga aatacaaaaa gtcctacgcg tttatacttg
    14941 gtgcttaaaa tatcaaaagc actgatcatc ccgcaagttc taaaattacc caaaaagtca
    15001 aatttttcaa gtcttgaaaa ttcttttttg ataaactcgc ttaaaatttg attttttact
    15061 aaaatatttt catcctcaaa gatatctaaa accgcatttg ctgccgcgca agctaaggta
    15121 tttcccgtat agctatgaga atgtaaaaaa gccttttggc tttcataagt atcataaaaa
    15181 gcattataaa tttcatctct tgtaagcact acagaaagtg gcataaatcc acccgttatc
    15241 ccttttgaaa ggcagataaa atcggggctt tgtttgcatt gatgtaaggc aaacaaagtt
    15301 cctgtgcgtc caaagcccac tgcaatttca tcaaaaatca cttgcactcc aaatttatgg
    15361 caaagcttta tggcctcatc aataaaccct gcttgataca tatgcatatt tcctgcacat
    15421 tgcaccaagg gttcaagtat aaaagcacaa atttcacttg catttttttc taaaatatct
    15481 tttaaaattt caagctcttt agtgtagtct ttgccttgtg gcacaggcgt gcttaaacac
    15541 tctaaaagca aggctttgta agtatcttta taaagcgcaa catcgcccac acttaaagcc
    15601 cctaaagttt caccatgata agaattgctt aaagataaaa atttactttt tttcaccccc
    15661 ttatttaaat gataatgaaa actcatctta agtgctactt caatagcact tgagccatta
    15721 tctgcataaa aacatttgtt aaaattcctg cctacttttt cgcaaagtct tgcagaaagc
    15781 ttgatgatgg gctcatgtgt aaagcctgct aagatcacat gctctagctc atcaacttgt
    15841 tttttaatgg catttgcgat tttttcatta caatgaccaa aaagattgac ccaccaagaa
    15901 ctcacacaat ccatataagc tttatcatca aaatcataaa gccatacgcc ttttgctttt
    15961 tttataggaa ttaaaggtag ggtttcgtga tctttcattt gtgtgcaagg gtgccaaatg
    16021 tgttttaaat cgagattttt taagatttga ttttgcatta taacttcttt tttaaaaata
    16081 ttttggcaaa ataatacttt aaatttctga attttaggaa aaaaatgagc cttaaaaata
    16141 tcttagaaac ccttgaaaaa aaccataatc ttagaaaact tacaagcctt aaacatgaag
    16201 gaaattttgt ttttaaagag ggtaaaaagc ttttaaattt agcggggaat gattatttaa
    16261 atttaagctt ttgcaaatct ttaaaagatg aatttttaga taatatcaaa gaacaagact
    16321 tatttttttc aagttcaagt tcaagaagct tgagtggaaa ttttacaatt tatgaagaat
    16381 tagaaagctt tttaaaatcc aaatttaaag aaaaagaaat tttacatttt aacagcggtt
    16441 atcatcttaa tatctcttgt atagctgcac ttgcaagcat tccaaacaca ctttttttag
    16501 cagataaatt catccatgca agtatgattg atggactaaa acttggcgga gcaaaatttt
    16561 ttcgctttta tcataacgat atgaatcatt tagaaaattt aattcaaaaa cattatgatc
    16621 attatgaaaa tatcatcatt ttaagcgaag cgttatttag catggatggt gatttttctg
    16681 attttaatac actcatcgcc tttaaagaaa aataccctaa aatcaaactt tatatcgatg
    16741 aagcacacag cgtgggttgc tttaatgagg agggcttggg acttgttaaa gctttaaatt
    16801 tggaagaaaa ggttgatttt atagttttta cctttggcaa ggctcttgct tctatgggtg
    16861 cttgtatgat ttgtaataat ctttataaaa gcttttttat caacaaggct agagctttta
    16921 tttattctac agcattgcct cctatcaata tagcttggac aaaatttatt tttgaaaaaa
    16981 tgagcgaact aaaagaaaaa agagaaaaac tacaaatcat aggcaatttt tttaaaaatc
    17041 aactcataga aaaaagtcat caaattttag gcgatgctta catcatctcc ttggttttag
    17101 gagaaaatca aaaggctata gaattagcaa aaaaacttga agtaaatggc atttttgcac
    17161 ccgctataaa agaacctact gtgcctaaaa atacagctag aattcgtttt tctttgcatg
    17221 caggacttag caaagaagac ttaaagaaag tggtagaact tttatgaaaa taagcaattt
    17281 aattcaaaat caaaactcac aagaacttat cttggtattt ggtggttttg cttcacatcc
    17341 tagtcatttt gcacatttaa aaagcgataa aaatgtagtt ttggtttatg attatgaaaa
    17401 tttagacttt aaatttgatt taaactcttt ttctaaaatc actctcatag ctttttctat
    17461 gggagtttgc gtggcaagta gagttttaaa aaatatagag ttttcgcaaa aaatagctat
    17521 caatggtact ccttttgg
//
LOCUS       DAQUWA010000040        16979 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.040, whole genome shotgun sequence.
ACCESSION   DAQUWA010000040 DAQUWA010000000
VERSION     DAQUWA010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16979
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.040"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            30..959
                     /locus_tag="R8X70_001141"
     CDS             30..959
                     /locus_tag="R8X70_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928923.1"
                     /translation="MNFKFFSIIVGILVVVILILSGTYYYLFEYSKPSYTPITQTSTE
                     QNQYSNNTHTTTQNSYVSDITNTNNENINLIQDKQDEKDANNIINDDNKSDTKSSQIT
                     KQNNEEKLAAIEKEISKQQKILEQEKIFKPQNTNNNKTNYQAKKLSPAQEYLSLGKNS
                     RLEPQLSTENMKVYVLDGKFLSDYRIKLLKDMLAIIEDNSKDYFLSVFVKMLPKGEMS
                     LTIYNKDIIFSDMKKSYKYISMDKISPYIKTPEVLNQYVAREEIIERFKLQTKKEGKG
                     SEFSKHINSLKTGLNKAQYFFPFCEIIEITSVK"
     gene            985..3597
                     /locus_tag="R8X70_001142"
     CDS             985..3597
                     /locus_tag="R8X70_001142"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEF2928924.1"
                     /translation="MYDKSIEKTYYQICEERGYFEIDGNKAIQEKNKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKE
                     ELGREKFIEKIWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLANAVKKAFVELY
                     DKKLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYYLKDSDEYLVVATTRPET
                     FFGDTAVMVHPDDERYKQFIGKELILPLSNKAIKIIADEHVEKEFGTGVVKVTPAHDM
                     NDYEVGLRHNLEFISVFDEKGILNEHCLEFRGLERLEARDKIVAKLDSLGFIDKIEEH
                     NNQVGYCYRCNNIVEPYISKQWFVKQEIAKESIEKVALGESKFYPSHWVNSFNAWMKD
                     LRAWCISRQLWWGHQIPVYYCECSHEWASQDTPKACPKCGGQNFKQDEDVLDTWFSSG
                     LWAISTLGWGNDTWGKDKIWFEEDLKEFYPNSLLITGFDILFFWVARMMFQSTNALGA
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNATNYLLLNEEQFEDLEKIELKSALAQFVYSRFQDCVKNVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAQKESVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSKSELKTSASIMISKYPQFHAKNSNIEEIFSLIIESIVSIRRAKSLVDLG
                     NSKIEKAYIKLNDKKMQDEIKSYMKFITMLAKCENIEFTENKLQKAICDVSENLEIFI
                     TLNNVDLSGILTRLENQKTKLEKESTKLNAMLSNEKFIANAPKEVVEQNKEALANLKT
                     QLEKISAELANLKG"
     gene            3603..4613
                     /locus_tag="R8X70_001143"
     CDS             3603..4613
                     /locus_tag="R8X70_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEF2928925.1"
                     /translation="MIKIQNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLESYQEGSLKVLDAEIKDLSQNNPKKLRMLRKDIGMIFQNFALMERKNVFENV
                     AMPLRMHYSQCKIYSKLFGKEYMSEKDLNQKVNSLLDVVGLDHKNKAYPRELSGGQKQ
                     RVAIARALTLNPKILLSDEATSALDPNTTKNILELIAKINAEFGITVVLVTHEMDVVK
                     DVAQKALLLEHGQIIGSGAIDELFLKPNEKMKEFLGESDFLPSTGLNIKLYFPKEVAQ
                     NSIITHMARTLNIDFNIVWGKIEKLNGNALGNLVINIDEKDKSKVLNYIEQSGVLWEV
                     VS"
     gene            4610..5515
                     /locus_tag="R8X70_001144"
     CDS             4610..5515
                     /locus_tag="R8X70_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2928926.1"
                     /translation="MNEVSIFDAFLGRISQFFTEFSWQGIKEVSLNSISTFAQNYENI
                     LKPALNETIYMSLMAVFFGFILAIIPGILLAIWDKNGIKHNKIAYAVLDFITNLLRAF
                     PFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEVDHGIIEAAK
                     SYGASNTQIIFKVIFNESLPNIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYGYE
                     RFNKEIMIQTVVILLVLVQLVQILGNLFYTWAKNSKTLYILATLIALFVISIIININN
                     DESFVWQAIILIVLALCFIYKFLKK"
     gene            5709..6482
                     /locus_tag="R8X70_001145"
     CDS             5709..6482
                     /locus_tag="R8X70_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEF2928927.1"
                     /translation="MNIKNLIVASFLGLAVNLTAAETISIAATPVPHVEILEQVKPEL
                     EKQGYKLEIKEFTDYVLPNLAVDSGEVDANFFQHTPYLEEFNKNKGTKLTKVANVHIE
                     PMAVYSKKYKSLDDIKEGATIAIPNDPTNESRALDIIAKKGLVEFKEKALKTPLDITT
                     NPKKIKFVELKAAQLPRALNDVDFAVINSNYALSANLNPAQDGVFIEDKESPYANILV
                     VKTGNENDPKIQALAKALQSEKVKQFIIEKYKGSILPAF"
     gene            6537..7307
                     /locus_tag="R8X70_001146"
     CDS             6537..7307
                     /locus_tag="R8X70_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEF2928928.1"
                     /translation="MKLFKIILLFCLLNLSPIFAKTITIGATPNPFASLLEKVKDDFK
                     DKGYELKIIEFSDYILPNRALEEKELDANLYQHKPFLEEYNAQKGTNLTPTTPVVIAP
                     VGIYSKTIKDLKNLKKGARVAIPNDATNESRALELLEKAGLIELNQNTLKTPLDIKKN
                     PKNLKFIELKAAQLPRALDDVDIAVINSNFALGAGLNPIKDTIFREDKNSPYVNYVVV
                     RFEDKDNEKTKIIDEILRSDKFRNIIDEHYKDVLIPAF"
     gene            7317..8093
                     /locus_tag="R8X70_001147"
     CDS             7317..8093
                     /locus_tag="R8X70_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEF2928929.1"
                     /translation="MKFKKILLSVFCITSFLFGAEKSIIIGATPTPYAEILNFAKPIF
                     KERGWNLEVKEFSDYNIPNISLNEKDLDANLYQHKPFLEDFNAHKGTKLSSLGSIVLV
                     PMAIYSNDIKDIKNIPNGAKIAIPNDATNESRALDLLAKAGLIEFKTSSTLKTPIDIS
                     KNPKNLKFIELKAAQLPRALNDVDLAVITTNYALGAGLNPLKDGIFIEDKDSLYAIVL
                     AVRQGDEKNEKSLILKEILTSDKIKNFINEQYKGSVIPTF"
     gene            8171..8833
                     /gene="flgA"
                     /locus_tag="R8X70_001148"
     CDS             8171..8833
                     /gene="flgA"
                     /locus_tag="R8X70_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HEF2928930.1"
                     /translation="MRIISFIFFVFIGLSHGANLEEIKTALAKEFKNNFPSLIIKNID
                     LKITTLPKDFEQYQFIRIANARFNQAQGFIRAEFKTPQNIQKNVFFRYFMQASLEVLK
                     SERSIQRGDKLGAFDYKSVLMDFDKVPSNALALEDTHNLIAKSNISKNTILKENMFKT
                     MALIRRNDPIIGVLSDGNVDVLIELTALHSANMGERIRAKNKEGKVMQGIVTGKNRMI
                     IQ"
     gene            8830..9393
                     /locus_tag="R8X70_001149"
     CDS             8830..9393
                     /locus_tag="R8X70_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEF2928931.1"
                     /translation="MKILLGISGSSSTHLGLKLLKNLENKCELYCIITEGAKISFEAE
                     NKKNLEKICQEQFQNICFLNDNNLSASVASGSFSIEKTIIAPCSISSLAKIHAGLADT
                     LLMRAAAVALKERKSLILGVREMPFSTLILEHMHKLSQLGVIIAPPIIASYSHASNLE
                     QMENFIIGKWLDLLGISHNLYERWQNF"
     gene            9433..9909
                     /gene="coaD"
                     /locus_tag="R8X70_001150"
     CDS             9433..9909
                     /gene="coaD"
                     /locus_tag="R8X70_001150"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEF2928932.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDKVIVAIANSEHKKPCF
                     SLEQRKELAKLATSHLNNVEIITFDNLLVDLAKELKVNTIVRGLRAVSDFEYELQIGY
                     ANHALWEEIETIYLMPNLKNAFISSSIVRSIASHGGDISTLVPKEILPFLKDLPCM"
     gene            9900..10478
                     /locus_tag="R8X70_001151"
     CDS             9900..10478
                     /locus_tag="R8X70_001151"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEF2928933.1"
                     /translation="MYVVFEGVDCVGKSTQISLLKECFKEAVFTAEPGGTKLGNHLRE
                     LLLYKPYQLDKKTELLLFLADRAQHCEEILKANQDKLIISDRSFISGMAYAKDFENEE
                     LFRLNAFALENFFPQKVIFLKGDENLIKERLSQKEQDAIEKRGIDYFLSVQDKLENTL
                     YFLKEKINLQVLTLNANDTKENLHQKIKDFLQ"
     gene            10475..11701
                     /locus_tag="R8X70_001152"
     CDS             10475..11701
                     /locus_tag="R8X70_001152"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEF2928934.1"
                     /translation="MINALKGMKDLSDKDALYYEKIIKTCEEVAKNYGFNFINTPHLE
                     QSILFKRSVGESSDIVGKEMYEFTDKGGNEVCMRPEGTAGVVRAYIEKKLDKNISVKR
                     WFYHGSMFRYERPQKGRLREFHQFGVESFGMPSVYEDASIILMLVEIFSRLGIDFKLQ
                     LNSLGCSQCLPKYRDELVEFLDSKEGFCEDCLRRKNLNPIRVLDCKNEYCQNLLENAP
                     LLINNLCTSCQKDFETLQQILKDNGVKFELDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLGGKSGYGIGFAMGIERIIAILEQKEELEKREGIYLCAMDEIYIP
                     KLLQIATKLRKKHKVILSYEARKLAKHLENGDKINSKHFLCMGENEAKSESLFYKNLE
                     NKDEKVIQISDLENAL"
     gene            11698..13533
                     /gene="speA"
                     /locus_tag="R8X70_001153"
     CDS             11698..13533
                     /gene="speA"
                     /locus_tag="R8X70_001153"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEF2928935.1"
                     /translation="MMNYGIDIWGNDNFIIKNGKVCINHEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHLIQKQIESIYGSFNKARKEFNYKGKFNAVYPLKVNQYPGFVKNLVRLGK
                     DYNYGLEAGSKAELLLAMAYNNEDAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIVDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLVA
                     PVLELFSQEYTESKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSI
                     PDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKNNPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEATISVNEKGYEIEGIIEAQSILDALEDLDYD
                     IHTIMDILNERISNSKLVNEKQKKHILGELYLFLNDNGYLKSIGV"
     gene            13534..14166
                     /gene="cysE"
                     /locus_tag="R8X70_001154"
     CDS             13534..14166
                     /gene="cysE"
                     /locus_tag="R8X70_001154"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEF2928936.1"
                     /translation="MGFFGIIKEDFSQPKVQDPAYNSCVELFFNYPGVWAVVNYRFAH
                     FFYTKNFKRTARIISGISQFLTGVDLHPGATLGRRIFIDHANGVVIGQTAVIEDDVLI
                     YQGVTLGGTSLEKGIKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDVGAN
                     LTAVGIPAYIVEERRKNKENTRAVDANCEDKLEKLERKIAELEKALSDIK"
     gene            14317..15486
                     /locus_tag="R8X70_001155"
     CDS             14317..15486
                     /locus_tag="R8X70_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEF2928937.1"
                     /translation="MLTQRSQVLEESITLAITALANELKAKGEDVISFSAGEPDFDTP
                     QTIKNAAIAAIEKGCGKYTAVAGIADVLKAIQNKLKKDNNLSYETSEIITNVGAKHSL
                     FECIECLVEEGDEVIIPSPYWVSYPEMVKFAGGKPVFIEGLEENGFKINAEQLKKAIT
                     PKTKILMLNSPSNPVGSIYNKEELLSIAKVLEGTKIIVLSDEMYEKLRYDGFEFVAFA
                     SVSEDALNRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGECDEDIEKMRQAFEKRRDLALNMLHQIPNISVYKPEGAFYLFVNTQKIEK
                     DSMKFCQKLLEQEKVAVVPGIGFGMDGYFRLSYATSDELIKKGIERIANFIKNYK"
     gene            complement(15596..15937)
                     /locus_tag="R8X70_001156"
     CDS             complement(15596..15937)
                     /locus_tag="R8X70_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEF2928938.1"
                     /translation="MKITQWNKADFSPKEVKINVLIDDEHSKEIQILLAKDSVMKEHK
                     APFAIRVQVLSGKIWFEVENEKFEFNTLDMISLEANVPHSLGGLEDSVIRLSLNKLDK
                     VQRVNAVLKKP"
     gene            complement(16007..16969)
                     /locus_tag="R8X70_001157"
     CDS             complement(16007..16969)
                     /locus_tag="R8X70_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEF2928939.1"
                     /translation="MQGKKYEIFLNENPQTHNAFKVSFREVLRYYYLYPKNAKATFKL
                     PFFKPNLKYFRTPHITWLGHSSLFVSYKNYKILIDPIFNTHASPCSFINKAFKNAPVY
                     NANDFDEIFAVIITHSHFDHLDEKSVKTLKDRAKFFIAPLKVGNYLKSYGVSEKKIIE
                     LDWWSGVEFDDLRIVATPAQHSSSRGDGLNKTLWASFVMEFLSADKRVFFSGDGGYFT
                     HFKKIGAYFGGFDLVCLESGQFNAAWPFSHSFPDQILKEAKDLNAKALMPIHWGRFLA
                     GTHAWNGVVEYLYENSNLPLITPKMGEAYEVGSEFEQDFWWKEG"
BASE COUNT         6272 a         2563 c         2927 g         5217 t
ORIGIN      
        1 aatttatttt atttgttaag gaattaaaga tgaattttaa atttttttct attattgtag
       61 ggattttagt cgttgtgatt ttaatactta gcggaactta ttactatctt tttgagtatt
      121 ctaaacctag ctatacacct ataacacaaa cttcaacaga acaaaaccaa tacagcaata
      181 acacccatac aacaacccaa aactcttatg tttccgatat tacaaataca aataatgaaa
      241 atataaattt aatacaagac aagcaagatg aaaaggatgc aaataacatc attaacgatg
      301 acaacaaaag cgatacaaaa tcttctcaaa ttacaaaaca aaacaatgaa gaaaaactag
      361 cagcgattga aaaagaaatc agtaaacagc aaaaaatttt agaacaagaa aaaatattta
      421 agcctcaaaa tacaaataac aataaaacaa attatcaagc taaaaaacta agcccagcgc
      481 aagaatattt aagcttggga aaaaatagtc gccttgaacc tcaactaagt acagaaaata
      541 tgaaagttta tgtgcttgat ggtaaattct taagcgatta tagaatcaag cttttaaaag
      601 atatgttagc gattatagaa gataattcta aagactattt tcttagtgtt tttgttaaaa
      661 tgctgcctaa gggagaaatg agtttaacta tttacaataa agatattatt ttctctgata
      721 tgaaaaaatc ttataaatat ataagtatgg ataaaatttc accttatatt aaaacccctg
      781 aagtgcttaa tcaatatgta gcacgcgaag aaattataga aagatttaag cttcaaacta
      841 aaaaagaagg aaaaggaagt gaattttcta agcatataaa tagcttaaaa actggactta
      901 acaaggctca atactttttt ccattttgtg aaatcataga aattacttcc gtaaaataag
      961 ccgtgtaaaa aaggtaaaaa aataatgtat gataaaagca tagaaaaaac atattatcaa
     1021 atttgcgaag agcgtgggta ttttgaaatc gatggaaata aagccataca agaaaaaaat
     1081 aaaaattttt gtatcatgat gccaccgcct aatgtaacag gcgttttaca cataggccat
     1141 gctttaacct ttactttgca agatattatg acacgatata agagaatgga tggctataaa
     1201 gttctttatc aaccaggact tgaccatgca ggaattgcca ctcaaaatgt tgtagaaaaa
     1261 caacttcttg ctcaaggcat taaaaaagaa gaattgggtc gtgaaaaatt tatagaaaaa
     1321 atttgggaat ggaaagaaca aagcggtgga aaaatcctag atcaaatgag aactctagga
     1381 attactcctg cttggagccg cttgcgtttt actatggatg aaggcttagc aaatgctgta
     1441 aaaaaagctt ttgtggaact ttacgataaa aaacttatcg tgcgtggaaa ctatatgatc
     1501 aattggtgca ctcacgatgg agctttaagt gatatagaag tagaatacaa agaaaacaaa
     1561 ggcaaacttt atcatataaa atattattta aaagatagtg atgaatacct agtcgtagca
     1621 acaacgcgtc ctgagacttt ttttggtgat actgcagtca tggttcatcc tgatgatgag
     1681 cgttataaac aatttatagg aaaagaactg atcttgcctt tgagcaataa agccattaaa
     1741 atcatagctg atgaacatgt agaaaaagaa tttggaacag gggttgtaaa ggttacccct
     1801 gctcatgata tgaatgacta tgaagtagga cttagacata atttagaatt tataagtgtt
     1861 tttgatgaaa aaggaatttt aaacgagcat tgtttggaat ttagaggctt agaacgatta
     1921 gaagctagag ataaaattgt agctaaactg gatagtcttg gctttataga taaaatagaa
     1981 gaacataaca atcaagtagg atattgctat cgttgcaaca atatagtcga accttatatt
     2041 tcaaaacaat ggtttgtaaa gcaagaaatc gccaaagaaa gtatagaaaa agtagccctt
     2101 ggcgagagta aattttatcc aagccattgg gttaatagct ttaatgcttg gatgaaagat
     2161 ttaagggctt ggtgtatttc aagacaactt tggtggggac atcaaattcc tgtgtattat
     2221 tgtgaatgct cgcatgaatg ggcaagtcaa gatacaccaa aagcttgtcc aaaatgcgga
     2281 gggcaaaatt tcaaacaaga tgaagatgta ctcgatactt ggttttcttc gggactttgg
     2341 gcaataagta cacttggatg gggaaatgat acttggggaa aagataaaat ctggtttgaa
     2401 gaagatttaa aagaatttta tcctaattct ttattgataa ccggttttga tattttgttt
     2461 ttctgggtag ctagaatgat gtttcaaagt acaaatgctt taggggcttt accttttaaa
     2521 gatatttatt tacacgctct tgttaaagat gagcaaggta gaaaaatgag taagagtctt
     2581 ggaaatgtta ttgatccaaa tgaaagcatt aaagaatata gcgccgatat cttgcgtttc
     2641 accttagcct tgcttgctat acaaggacgc gatatcaagc ttagcaatga caaactttta
     2701 caagttagaa atttcacaaa taaaatctat aatgcgacaa attatctact tttaaatgaa
     2761 gagcaatttg aagacttaga aaagatagaa cttaaaagcg cattagctca atttgtttat
     2821 tctagatttc aagattgtgt aaaaaatgtg agagaaaatt tagacaatta tcgctttaat
     2881 gatgctgcaa acacacttta taaattcttc tgggatgatt tttgcgattg ggggatagaa
     2941 cttagcaaag ctcaaaaaga atcagtaaaa gaactaggaa gcattttcaa agaggcttta
     3001 aaactcttaa atccttttat gccatttatc agtgagtatc tgtatcacaa gcttagtaaa
     3061 agtgaactta aaacaagtgc ctccataatg ataagcaaat acccacaatt tcatgcaaaa
     3121 aattccaata tagaagaaat tttctctttg atcatagaaa gcattgttag catacgccgc
     3181 gctaaaagcc ttgtggattt aggaaattca aaaatagaaa aagcctatat taaattaaat
     3241 gataaaaaaa tgcaagatga aatcaaatcc tatatgaagt tcatcaccat gcttgccaaa
     3301 tgcgaaaata tagaatttac agaaaacaaa ctacaaaaag ccatttgcga tgtaagtgaa
     3361 aatttagaaa ttttcatcac gcttaataat gtagatttaa gcggtatttt aacaaggctt
     3421 gaaaatcaaa aaacaaagct agaaaaagaa agtaccaaac taaatgctat gttgtcaaat
     3481 gaaaaattta ttgccaatgc gcctaaagaa gtcgtagaac agaataaaga agctttggca
     3541 aatttaaaaa ctcagcttga aaaaatatca gctgaactag caaatttaaa aggttaaaaa
     3601 ctttgataaa aatacaaaat ttaaaaaaat attacggaaa agaactggtt attaatgatg
     3661 tttccttgga gataaaaaaa ggtgaaatct atgctatcgt aggacacagc ggtgctggaa
     3721 aatctactct tttaagatgt atcaatggac ttgaaagcta tcaagaagga agtttaaaag
     3781 tgcttgatgc tgaaataaaa gatctaagtc aaaataatcc taaaaagctt agaatgttaa
     3841 gaaaagatat aggtatgatt tttcaaaatt ttgccttaat ggaaagaaaa aatgtattcg
     3901 aaaatgttgc aatgccttta agaatgcatt atagccaatg caaaatttat tctaagcttt
     3961 ttggcaaaga atatatgagc gaaaaagatt taaatcaaaa agtcaattct ttgcttgatg
     4021 ttgtagggct tgatcataaa aacaaagcct accccagaga acttagtggg gggcaaaaac
     4081 aacgcgtggc cattgctaga gccttgactt taaatcctaa aattttactt agtgatgaag
     4141 ccacttcagc tcttgatcct aatacaacaa aaaatatttt agaactcatt gctaaaatca
     4201 atgctgaatt tggaataacc gtggttttag tcacacacga aatggatgtt gtaaaagatg
     4261 ttgctcaaaa agctttactt ttagaacatg gtcagattat aggaagtggc gcaattgatg
     4321 agctcttttt aaaacctaat gaaaaaatga aagaattttt gggcgaaagt gatttcttgc
     4381 cttcaacagg tttaaatatc aagctttact tcccaaaaga agtagcgcaa aatagtatta
     4441 ttacgcatat ggcaagaact cttaatatcg attttaatat tgtttggggt aaaattgaaa
     4501 agcttaatgg aaatgctttg ggaaatctag tgattaatat cgatgaaaag gataaaagta
     4561 aagttcttaa ttatatagaa caaagtgggg ttttatggga ggtagtatca tgaatgaagt
     4621 gtctatattt gatgcatttt tgggaagaat ttcgcaattt tttactgaat tttcttggca
     4681 aggtatcaaa gaggtatctc taaattccat cagcaccttt gcacaaaact atgaaaatat
     4741 tttaaaacct gctttaaatg aaactattta tatgagttta atggctgtat tttttggttt
     4801 tattttagct ataattcctg gaattttact tgctatttgg gataaaaatg gtatcaagca
     4861 taataaaatc gcttatgcgg ttttagattt tatcaccaat cttttaagag cttttccttt
     4921 tcttatattg attgttgtgc ttttacctct ttctaaaatt atagtgggca ctagtattgg
     4981 cacaaatgca gccatagttc ctttagctat aggtatagca ccttatttgg caaagatgtt
     5041 agaaagtgct tttaaggaag tagatcatgg cattatagaa gctgcaaaaa gctacggtgc
     5101 aagcaatact caaatcatct ttaaagtgat ttttaacgaa tccttgccaa atattattag
     5161 cggtataact ttgactttga tttttaccat aggtttttca gctcttgcag gaactgtcgg
     5221 tggtggcgga cttggagatg tggcgattcg ctatggttat gaacgcttta ataaagaaat
     5281 catgattcaa acggtagtta tcttacttgt attggtgcaa ttggttcaaa ttttaggcaa
     5341 tttattttac acttgggcta aaaatagcaa aactttatac attcttgcta ctttaatagc
     5401 cttatttgta attagcataa tcatcaatat aaacaacgat gaaagttttg tttggcaagc
     5461 aattatttta atcgttcttg ctctgtgttt tatttataaa ttccttaaaa aataaaaaat
     5521 taaatccggt tttaatttaa atataagttt ttttaagtag aataagccaa aaaattttta
     5581 aaaggattaa cagatgatgc ctcagatgcg ctagtctgac tatcaagatt tctcataatg
     5641 cttcttcctg atagtcagag tgattaagat taaagcaagc acaaaaatga ctatataagg
     5701 aaattaaaat gaatatcaaa aatttaatcg tagcaagttt tttaggtttg gctgtaaatt
     5761 taacagccgc agaaactatc agtatcgcag caactccagt tcctcatgtt gaaatattag
     5821 agcaggtaaa acctgaacta gaaaaacaag gttataaact cgaaatcaaa gaatttacag
     5881 attatgtttt acctaatcta gccgtagaca gcggagaagt ggatgcaaat ttctttcagc
     5941 acacacctta tttagaagaa ttcaataaaa ataaaggtac caaactcacc aaagtagcta
     6001 atgtgcatat cgaacctatg gctgtttatt ctaaaaaata taaaagttta gatgatatca
     6061 aagaaggtgc tactatagct ataccaaatg acccaaccaa tgagagtaga gctttagata
     6121 ttatcgcaaa aaaaggtttg gtggaattta aagaaaaagc tcttaaaact ccacttgaca
     6181 tcacaacaaa tccaaagaaa ataaaatttg tagagcttaa agctgctcaa cttccaagag
     6241 ctttaaatga tgtggatttt gctgtaatta attctaacta tgcactttct gcgaatttaa
     6301 atccagctca agatggcgta tttatagaag ataaagaaag cccttatgca aacatccttg
     6361 tagtaaaaac aggaaatgaa aatgatccta aaatccaagc tttagcaaaa gctctacaaa
     6421 gtgagaaagt taaacaattt atcatcgaaa aatacaaagg ctcaattctg cctgcatttt
     6481 aatccttgtc ccttttttag ggactcttct ttttttaatc accaaaggag ttttttatga
     6541 aattatttaa aattatttta ttattttgct tactgaattt aagtcctata tttgccaaaa
     6601 ccataaccat aggagctaca ccaaatccct ttgcaagctt actagaaaaa gttaaagatg
     6661 attttaaaga taagggttat gaattaaaaa taatagaatt ttctgattat atactgccta
     6721 atagagcctt agaagaaaaa gaacttgacg caaatttata tcagcacaaa ccctttttag
     6781 aagaatacaa tgctcaaaaa ggcacaaatt taaccccaac aacgcctgtt gtcatcgcac
     6841 cagtaggaat ttatagcaaa acaattaaag atttaaagaa tcttaaaaaa ggtgctaggg
     6901 ttgctatacc taatgacgct acaaatgaga gtagagcttt ggagctttta gaaaaagctg
     6961 gcttgattga gttaaatcaa aatactctta aaaccccatt agatataaag aaaaatccta
     7021 aaaatcttaa atttatagaa ctaaaagcag cacaactccc aagagcttta gatgatgtgg
     7081 atattgctgt gattaattct aattttgcgc ttggagctgg actaaatccg attaaagata
     7141 ccatctttag agaagataaa aatagccctt atgtaaatta tgttgtggtt cgttttgaag
     7201 ataaagacaa tgaaaaaact aaaatcatag atgaaatttt aagaagtgat aaatttagaa
     7261 atattattga tgagcactat aaagatgtgc taatccctgc attttaagga gtttttatga
     7321 aatttaaaaa aatattactg agtgtttttt gcataacaag ttttctcttt ggagccgaaa
     7381 agagtatcat tataggagca acgcctactc cttatgctga aatcttaaat tttgcaaaac
     7441 ctatttttaa agaaagaggt tggaatcttg aagtaaaaga atttagtgat tataatatac
     7501 ctaatatctc gcttaatgaa aaagatttag atgcaaattt atatcaacac aaaccctttt
     7561 tagaggattt taacgctcac aaaggcacaa aattaagttc tttgggttct attgttttag
     7621 ttcctatggc tatttattct aatgatatta aagatattaa aaatatccca aatggtgcta
     7681 aaattgctat tccaaatgat gctaccaatg aaagtagagc tttggatttg cttgctaaag
     7741 ctggtttgat cgaatttaaa acttcaagca ctcttaaaac cccgattgat atcagtaaaa
     7801 atcctaaaaa tcttaaattt atagagctaa aagccgcaca acttccaaga gctttaaatg
     7861 atgtagattt agcagtcatt acgacaaatt atgcccttgg cgcaggactt aatcctctaa
     7921 aagatggaat ttttatagag gataaagaca gcttatatgc tatagttctg gcagtaagac
     7981 aaggtgatga aaaaaacgaa aaaagtctaa ttcttaaaga aattctaacc agtgataaaa
     8041 taaaaaattt catcaatgag caatacaaag gctctgttat acctactttt taatccaagc
     8101 aaagccttta aaggctttgt aaatttgtat tgggtaaaat ataaaagatt aataccatat
     8161 taggctggca atgagaatta tatcttttat tttttttgtt tttattggtt taagtcatgg
     8221 tgcaaattta gaagagatta aaactgcact tgccaaagaa tttaaaaaca attttccaag
     8281 tttaatcatc aaaaatatcg atttaaaaat cactacttta cctaaagatt tcgaacaata
     8341 tcaatttata agaatagcca atgctcgttt taaccaagcg caaggattta taagggctga
     8401 atttaaaacc ccacaaaata tacaaaaaaa tgtatttttt cgttatttta tgcaagcaag
     8461 tttagaagta ttaaaaagtg agcgctctat acaaagagga gataaacttg gcgcttttga
     8521 ctataaaagc gtacttatgg actttgataa agttccctct aatgctctcg ctcttgaaga
     8581 cactcacaat ctcatagcaa aaagcaatat cagtaaaaat actattttaa aagaaaatat
     8641 gtttaaaacc atggctctta ttcgccgcaa tgaccctata ataggtgttt taagtgatgg
     8701 aaatgttgat gtattaatag aactcacagc cttacacagt gccaatatgg gagaaagaat
     8761 tcgagcaaaa aacaaagagg gtaaagtcat gcaaggtata gttacaggaa aaaataggat
     8821 gattatacaa tgaaaatttt attaggaatt tcaggatcta gtagtacgca tttaggactt
     8881 aaacttttaa aaaatttgga aaataaatgc gagctttatt gtattattac tgaaggtgca
     8941 aagataagtt ttgaagctga aaataagaaa aacttggaaa aaatttgtca agaacaattt
     9001 caaaatatct gttttttaaa tgataataac ctaagcgcaa gtgttgcaag cggatctttt
     9061 agtatagaaa aaaccatcat tgcaccctgc tctatctcga gccttgctaa aattcacgca
     9121 ggattagccg acacactttt gatgcgagct gctgccgtgg ctctaaaaga aagaaaaagt
     9181 ttgattttag gagtaagaga aatgcccttt tcaactttaa ttttagaaca tatgcacaag
     9241 cttagtcaac taggtgttat catcgcacct cctattatag cgagctattc tcatgctagt
     9301 aatttagaac aaatggaaaa ttttatcata ggaaaatggc tagatctttt aggaatttct
     9361 cataatttat acgaaagatg gcagaatttt tagcttaaat ttgttatatt tttaaaaatt
     9421 tttggagtaa aaatgacttg tttatatcca gggacttttg accctattac aaatggacat
     9481 ttagatgtga ttaaaagagc gcttaaaatc tttgataaag tgattgtagc tatagcaaat
     9541 agcgagcata aaaagccttg ttttagctta gaacaaagaa aggagcttgc aaagcttgct
     9601 acttcacatt taaacaatgt agaaattatc acttttgata atctccttgt agatttagcc
     9661 aaagagctca aagtaaatac catagtaaga ggacttagag cagtaagtga ttttgaatac
     9721 gaactacaaa ttggctatgc taatcacgcc ctttgggaag agattgaaac catttatcta
     9781 atgccaaatt taaaaaatgc gtttatctca agttctatag ttagatctat tgcttcccat
     9841 ggaggagata tcagcacttt agtccctaaa gaaattttac cctttttaaa ggatttgcct
     9901 tgtatgtagt ttttgaaggg gtggattgtg ttggtaaaag tacgcaaatt tcacttttaa
     9961 aagaatgttt taaagaagcc gtttttactg cagagcctgg gggaaccaaa ctaggcaatc
    10021 acctaagaga gcttttactt tataaaccct atcaacttga caaaaaaacc gagcttttgc
    10081 tttttttagc tgatcgtgcg cagcactgtg aggaaatttt aaaagcaaat caagataaac
    10141 tcattattag cgatagaagt tttatttcag gcatggctta tgcaaaagat tttgaaaacg
    10201 aagagctttt tagacttaat gcctttgctt tagaaaattt cttcccgcaa aaagttattt
    10261 ttttaaaagg cgatgaaaat ttaatcaaag aacgtcttag ccaaaaagag caagatgcta
    10321 tagaaaaacg cggaattgat tatttcttaa gtgtccaaga taaacttgaa aatactcttt
    10381 attttttaaa agaaaaaata aatcttcaag ttttaaccct aaatgcaaat gatacaaaag
    10441 aaaatttaca ccaaaaaata aaggattttt tacaatgatt aatgctctaa aaggtatgaa
    10501 agatttaagc gataaagatg cgctatatta tgaaaaaatt atcaaaactt gcgaagaagt
    10561 tgcaaaaaac tacgggttta atttcatcaa tactccacat ttagagcaaa gcatactttt
    10621 taaaagaagt gtaggagaaa gttctgacat cgttggcaaa gaaatgtatg aatttacaga
    10681 caaagggggc aatgaagtct gtatgcgccc tgaaggcaca gcaggagtcg tgcgtgccta
    10741 tatagaaaaa aaattagata aaaacatcag cgtaaagcgt tggttttatc atggctctat
    10801 gtttcgttat gaaagacctc aaaagggtcg cttaagagaa tttcatcaat ttggagttga
    10861 aagctttggt atgcctagcg tttatgaaga tgcgagtatt attttaatgc tagtagaaat
    10921 tttctcacgc cttggtattg atttcaaact tcaacttaat tctttaggct gctcacaatg
    10981 cttgccaaaa taccgcgatg agctcgttga attcttagat tctaaagaag gtttttgcga
    11041 ggattgtttg cgtagaaaaa atttaaatcc tattcgcgtt ttggattgta aaaatgaata
    11101 ttgtcaaaat ttgcttgaaa atgctccact tttaatcaat aatttatgta cctcttgcca
    11161 aaaagacttt gaaacactac aacaaatttt aaaggataat ggagttaaat ttgagttaga
    11221 ttcaaaactt gtgaggggct tggattatta ttctaaaacg gcttttgaat ttataagcga
    11281 tgaaatagga gcaaaagccg ccattgcagg tggaggacgc tacgatagac ttatagagta
    11341 tttaggtgga aaaagtggct atggtatagg ttttgccatg ggtatagaaa gaattatagc
    11401 cattttagaa caaaaagaag agttagaaaa aagagaggga atttatcttt gtgctatgga
    11461 tgaaatttat atcccaaaac ttttgcaaat tgctaccaag cttagaaaaa aacacaaagt
    11521 aatcttaagc tatgaagcta gaaaacttgc caagcactta gaaaatggag ataagataaa
    11581 ttcaaaacat tttctttgca tgggggaaaa tgaagcaaaa agcgaaagtt tgttttataa
    11641 aaatttagaa aacaaagatg aaaaagtgat tcaaatttca gatttggaga atgctttatg
    11701 atgaattatg gaattgatat ctggggaaat gataatttta tcatcaaaaa tggtaaagtt
    11761 tgtatcaatc acgaaaaaaa acctgccatt atcgatatag taaaagagct aagagatgat
    11821 ggatataaag gccctttgct cttaagattt cctcatttga ttcaaaagca aattgaaagt
    11881 atttatggaa gttttaataa agcaagaaag gaatttaatt ataaaggaaa attcaatgcc
    11941 gtttatcctt taaaagtcaa tcaatatcct ggttttgtaa aaaatctcgt tcgtttaggt
    12001 aaggattata attacggtct tgaagcaggt tctaaggctg agcttttact tgccatggct
    12061 tacaataacg aagatgcgcc tattaccgta aatggattta aagatagaga gcttatcaat
    12121 ataggcttta tcgcagctga aatgggacac aatatcacct taaccataga aggactaaac
    12181 gagcttgaag ccattgttga tatagctaag gagcgcttta agcctaaacc caatataggc
    12241 ttgcgtgtgc gtttgcactc tgcaggtgta ggaatttggg caaaaagcgg ggggattaat
    12301 tctaaatttg gacttacctc tactgaactt atagaagctg taaatttact caaagaaaac
    12361 aagcttttag agcaatttac catgatacat tttcatcttg gttcgcaaat cactgaaatt
    12421 catcctctta aaaaagcctt aaatgaagca ggtaacatct ataccgagct tagaaaaatg
    12481 ggggctaaaa atttaaaagc tatcaatcta ggtggcggtt tagcagtgga atactcgcaa
    12541 tttaaaaatg aaaaaagtag aaattatacc ttaagagaat acgctaacga tgtggtattt
    12601 atattgaaaa atatagccga gcaaaaaaaa gatcttgagc ctgatatttt tatagagagc
    12661 gggcgttttg tcgcggccaa tcacgccgtt ttagtcgctc ctgttttaga gcttttctct
    12721 caagaataca cagaaagcaa gcttatacta aaaaagcaaa atccaaaact tatcgatgaa
    12781 ctttacgatc tttacaaaag cataaagcct tccaatgctt tagaatattt gcacgatagt
    12841 atcgatcatt tagaaagcat cttaacactt tttgacttag gttatgtgga tttgcaagat
    12901 cgttctaatg ctgaaatttt aacacattta atcacaaaaa aagccatttt gcttttaggt
    12961 gataagcaaa atcctgcgga tttacttgct atacaagatg aagtgcaaga aaggtatttg
    13021 gtaaattttt cactctttca aagcatacct gatttttggg gcttggagca aaatttccct
    13081 atcatgccac ttgatagact tgacgaagaa ccaacaagaa gcgcaagcat atgggatata
    13141 acctgcgata gcgatggcga aatttcgtat tctaaaaaca atcctttatt tttgcatgat
    13201 gtagatgtag aaaaagaaaa ttattttcta ggttttttcc ttgtaggagc ttatcaagaa
    13261 gtgcttggaa tgaagcacaa tctttttacc catcctaccg aagcaacgat aagtgtcaat
    13321 gaaaaaggct atgaaatcga agggattata gaagctcaat ccatacttga tgctttagaa
    13381 gatctagact atgatataca tacgattatg gatatactta atgaacgcat tagcaattct
    13441 aagcttgtca atgaaaagca gaaaaaacac attttaggcg aactttatct tttcttaaat
    13501 gataatggct atttaaaaag cataggagta taaatgggat ttttcggcat tataaaagaa
    13561 gatttttccc aaccaaaagt acaagatcca gcgtataatt cttgtgtaga actttttttc
    13621 aattacccgg gtgtatgggc ggtagtaaat taccgctttg cgcatttttt ttatacaaaa
    13681 aatttcaagc gcaccgctag gataatcagc ggaatttcac aatttttaac aggcgtagat
    13741 ctacatccgg gtgcaacttt aggcagacgc atttttatag atcatgctaa tggagtggtg
    13801 ataggacaaa ccgcggtcat agaagatgat gttttaatct atcaaggcgt aaccctaggc
    13861 ggaaccagtc ttgaaaaggg tattaaacgc catcctacca tcaaaaaagg agtgattata
    13921 ggctcgggtg caaaagtact cggtaatatc actataggag aaaatgccaa aataggctcc
    13981 aatgccgttg ttgttaaaga tgtaggagca aatttaaccg cagtaggaat tcctgcttat
    14041 atagtagaag agcgtcgtaa aaacaaggaa aacacaaggg ctgttgatgc aaactgcgaa
    14101 gacaagctcg aaaagctaga gagaaaaatt gcagaacttg aaaaagcttt atcagatata
    14161 aaataatata taaaaatctt atatattatt ttatattttt taacctttaa cgaatttgca
    14221 cattagttca tttttacatt attaattttt aattaaattc actgcataag tgtgtttttt
    14281 tgctaaaatt agacaaaaaa ttcaaaagga caacagatgt taacccaaag atcacaagtt
    14341 ttagaagaat ccatcactct agcaatcact gcgcttgcta acgagttaaa agctaagggt
    14401 gaagatgtga tcagcttctc cgcaggtgag cctgattttg acaccccgca aaccatcaaa
    14461 aatgcagcta ttgctgccat agaaaagggt tgtggtaaat acactgctgt tgcaggaatt
    14521 gctgatgtat taaaagctat tcaaaacaaa ctcaaaaaag acaataatct tagctatgaa
    14581 acaagtgaaa ttattacaaa tgtaggggca aagcattctc tttttgaatg tatagaatgt
    14641 ctagttgaag aaggcgatga agtcatcatt cctagtcctt attgggtgag ctatcctgaa
    14701 atggttaaat ttgcaggtgg aaagcctgta tttatcgagg gtttagaaga aaatggcttt
    14761 aaaatcaacg cagagcagct taaaaaagcc atcactccta aaactaaaat tttaatgctt
    14821 aattctcctt caaatcctgt aggctctatc tacaacaaag aagagctttt aagtattgct
    14881 aaggttttag aaggtacaaa gattatcgta ttaagtgatg aaatgtatga aaaacttcgc
    14941 tacgatggct ttgaatttgt agcttttgca agtgtaagcg aagatgcttt aaatcgcact
    15001 gtgaccatca atggacttag taaatgcggt gctatgcctg gatggcgttt tggctatatg
    15061 gcaagtaaaa acaaagcctt gatttcagct gttaaaagac ttcaaggcca aagcacttca
    15121 aatatctgct ctatcactca gcacgctgcc atacctgcct taaatggaga atgtgatgag
    15181 gatatagaaa aaatgcgtca agcttttgaa aagcgtcgcg atttagcctt aaatatgctt
    15241 catcaaattc caaatattag cgtctataag cctgaaggag ctttttatct ttttgtaaat
    15301 actcaaaaaa ttgaaaaaga ttctatgaaa ttttgccaaa aattactaga acaagaaaaa
    15361 gttgctgtag ttccaggtat cggttttggc atggatggat attttagact ttcttatgct
    15421 acaagcgatg aacttatcaa aaaaggcata gaaagaatag caaattttat taaaaattat
    15481 aaataattct aggtttaaaa cctagaattg ctaactttgt taggcaatca aataaaattc
    15541 aaatgaccca aatttaaact ttctcaaacc caaatttcaa aataaaacca aaaaatcaag
    15601 gttttttaag cactgcattt actctttgga ctttatctag tttatttaaa ctaagtctta
    15661 tcacagaatc ctctaatcct cctaaagaat gaggcacatt tgcttctaag cttatcatat
    15721 ctaaagtatt gaattcaaat ttctcatttt ctacttcaaa ccaaatttta ccacttaaaa
    15781 cttgcacgcg gatagcaaag ggtgctttat gctctttcat cacgctatct ttagcaagta
    15841 aaatttgaat ttccttgctg tgctcatcat cgattaaaac attgattttt acttctttgg
    15901 ggctaaaatc cgctttattc cattgagtga ttttcataaa atctcctttt taattttata
    15961 agattgtaac aaaaatcaaa acacagacta taaacttgtg ttaattttat ccttctttcc
    16021 accaaaaatc ttgctcaaac tcacttccca cctcataagc ttcgcccatt tttggtgtaa
    16081 tcaaaggcaa atttgaattc tcataaagat attctaccac tccattccac gcatgagttc
    16141 ctgctaaaaa ccttccccaa tgtataggca ttaaagcttt tgcattcaaa tcttttgctt
    16201 cttttaaaat ttgatcagga aaagaatgcg aaaaaggcca agcggcatta aattgaccgc
    16261 tttcaagaca aactaaatca aaaccaccaa aataagcccc gattttttta aaatgtgtaa
    16321 aatatcctcc atcgccacta aaaaacaccc ttttgtccgc gcttaaaaat tccatcacaa
    16381 aagaagccca aagagtttta tttaacccat cgcccctgct tgaactatgc tgcgcaggcg
    16441 ttgcaacaat ccttaaatca tcaaattcca ccccactcca ccaatcaagc tctatgattt
    16501 ttttctcact cactccataa ctttttagat aatttcctac ttttaaaggc gcgataaaaa
    16561 atttagccct atcttttaaa gttttcacgc ttttttcatc taaatgatca aaatgagaat
    16621 gagtgataat cacggcaaaa atttcatcaa aatcattggc attataaaca ggtgcatttt
    16681 taaaagcttt attaataaaa gaacaaggtg aagcgtgagt gttaaagata ggatcgatta
    16741 aaattttata gtttttataa ctcacaaaaa gcgatgaatg tccaagccaa gtgatgtgcg
    16801 gagtacgaaa atactttaaa tttggcttaa aaaaaggaag tttaaaagtc gccttagcat
    16861 ttttagggta aagataataa tacctcaaaa cttccctaaa agacacttta aaagcattat
    16921 gtgtttgggg attttcatta agaaaaattt catatttttt accctgcact tttttagct
//
LOCUS       DAQUWA010000041        16898 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.041, whole genome shotgun sequence.
ACCESSION   DAQUWA010000041 DAQUWA010000000
VERSION     DAQUWA010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16898
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.041"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(200..1270)
                     /gene="rlmN"
                     /locus_tag="R8X70_001158"
     CDS             complement(200..1270)
                     /gene="rlmN"
                     /locus_tag="R8X70_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEF2928940.1"
                     /translation="MKELINILDFLPEELEEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     SLPKDLRLELAQTYHFSPLKCVKNEQSKDGSIKYLFELIDGLRIESVLLPMKEEQFDE
                     EGKRISHTRYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILSQNDGLAISPRRQTISTSGLAKQIKELGEM
                     NLGVLLAISLHAVNDELRTELMPINKAYNIAAIMDAVRAFPIDQRKRIMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGSIYHRPKLENAIKFQDLLSAKGVTCTI
                     RESKGLDISAACGQLKERAKEL"
     gene            complement(1290..1826)
                     /locus_tag="R8X70_001159"
     CDS             complement(1290..1826)
                     /locus_tag="R8X70_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEF2928941.1"
                     /translation="MIVCAGGNENFSFAKTIGIGLVESTFHLTQLCLKEKPSKLIFIG
                     TCGLYDKGEILGIYKSSHACNIEFSYISDQFYTPANIEIKLNNQNVSRETIKVNSSNY
                     ICQNSKAAKEFAKLGFFAENMEAFSILSVAKNLDIDAECILCATNFCNENAHEDFIKN
                     HQKAKEKLEEYLKINHYI"
     gene            1911..2705
                     /gene="rsmA"
                     /locus_tag="R8X70_001160"
     CDS             1911..2705
                     /gene="rsmA"
                     /locus_tag="R8X70_001160"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEF2928942.1"
                     /translation="MMKAKKHYGQNFLNDKSILSKIIQAIPKDTENIVEIGPGLGDLT
                     QELLKVSHVKAYEIDDDLIPILRKKFQKELDCGKLNLLHQDASKLACFDEKKYFLVAN
                     LPYYVASHLILQALEDKNCSGLIVMVQKEMALKFCAHSGESDFSALGVLSAMICEREI
                     LFDVEPECFNPPPKVVSAVMKMIKFRAYQDLCEIHAFKAFLKDCFKAPRKQLLGNLKI
                     HKAKLTELFQELKLNLNLRPHELCVDSYLKIYEKVKEEYERKQQRK"
     gene            2680..4710
                     /locus_tag="R8X70_001161"
     CDS             2680..4710
                     /locus_tag="R8X70_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002908863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEF2928943.1"
                     /translation="MNENNKGNSENTNNPNSNSKNNKRYKYRNRRKKLADSISENSQN
                     STHEFSNNEKINTKKNSTNTQPLEGENVEKPSEKKKKRNRNLPSKLTGNEDWQIALAE
                     CIEANRVSHENRLHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMS
                     FPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPL
                     ALGMISNKFEEHGLKAERKWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKA
                     GTIIHTGDFKIDQTPIDGYPTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGP
                     TFDQIFARTKGRVIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGY
                     IKLDRKIFIDADEVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPSDQIII
                     SAKAIPGNEASVSAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLVKPKFFL
                     PVHGEYNHINKHKETAIKCGIPEKNIYLMSDGDQVELCQKYVKRIKTVKTGKVFVDNQ
                     INKQIADDVVIDRQKLADSGIVVIIAQIDKATKTLINKPRVFSYGLVADKHDHAFSKE
                     MAEVLGQFFVNVKDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            4746..5507
                     /locus_tag="R8X70_001162"
     CDS             4746..5507
                     /locus_tag="R8X70_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEF2928944.1"
                     /translation="MRINKFISHNTRYSRREADELIKQGLVKINNKIALLSNEVKFDD
                     KVFVKGKRVQKRTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDY
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAF
                     GALDLGMLKAGKYRYLENGEYEKLRDFLKFNEIRY"
     gene            5705..6016
                     /gene="rpsJ"
                     /locus_tag="R8X70_001163"
     CDS             5705..6016
                     /gene="rpsJ"
                     /locus_tag="R8X70_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEF2928945.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
     gene            6026..6601
                     /locus_tag="R8X70_001164"
     CDS             6026..6601
                     /locus_tag="R8X70_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEF2928946.1"
                     /translation="MEYIVEKIGMSRTIANPSIAVTLLRVVNAKVCEVDNGKAIVAYS
                     KGKVNNKCVAGQQKKYNLSAEYNSFATLEVANTEAGDLDEAPLNEAKVLKVSFNTKGR
                     GYSGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            6598..7212
                     /gene="rplD"
                     /locus_tag="R8X70_001165"
     CDS             6598..7212
                     /gene="rplD"
                     /locus_tag="R8X70_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEF2928947.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKAAKGVLFTADSLAIESGKTKDANAVIKKLGVKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVTEVNAYLVSVFNAVIMEKSALESITKEG"
     gene            7215..7496
                     /locus_tag="R8X70_001166"
     CDS             7215..7496
                     /locus_tag="R8X70_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEF2928948.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKE
                     YFGVTPKSINSLRMDGKVKRFRGRLGQRNDYKKFYVKLPEGVSLESMEA"
     gene            7498..8328
                     /gene="rplB"
                     /locus_tag="R8X70_001167"
     CDS             7498..8328
                     /gene="rplB"
                     /locus_tag="R8X70_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEF2928949.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPVHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALISYKDGEKR
                     YILQPRGLSVGDIVATAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            8330..8611
                     /gene="rpsS"
                     /locus_tag="R8X70_001168"
     CDS             8330..8611
                     /gene="rpsS"
                     /locus_tag="R8X70_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEF2928950.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTIIPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            8622..9029
                     /gene="rplV"
                     /locus_tag="R8X70_001169"
     CDS             8622..9029
                     /gene="rplV"
                     /locus_tag="R8X70_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEF2928951.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVVVKSCRVDAGAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKTEAKKAVAKKTPVKKTSTKKVTAEKES"
     gene            9029..9730
                     /gene="rpsC"
                     /locus_tag="R8X70_001170"
     CDS             9029..9730
                     /gene="rpsC"
                     /locus_tag="R8X70_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEF2928952.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNIN
                     IKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLQKGLQTEKTE
                     ESAPAKKQRRTRRSK"
     gene            9733..10158
                     /gene="rplP"
                     /locus_tag="R8X70_001171"
     CDS             9733..10158
                     /gene="rplP"
                     /locus_tag="R8X70_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEF2928953.1"
                     /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
     gene            10145..10330
                     /gene="rpmC"
                     /locus_tag="R8X70_001172"
     CDS             10145..10330
                     /gene="rpmC"
                     /locus_tag="R8X70_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEF2928954.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     EVRKDIARINTAINALK"
     gene            10340..10591
                     /gene="rpsQ"
                     /locus_tag="R8X70_001173"
     CDS             10340..10591
                     /gene="rpsQ"
                     /locus_tag="R8X70_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEF2928955.1"
                     /translation="MAFKREIQGVVVKIAGEKTASILVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            10591..10959
                     /gene="rplN"
                     /locus_tag="R8X70_001174"
     CDS             10591..10959
                     /gene="rplN"
                     /locus_tag="R8X70_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEF2928956.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            10959..11192
                     /locus_tag="R8X70_001175"
     CDS             10959..11192
                     /locus_tag="R8X70_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEF2928957.1"
                     /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKI
                     AKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            11196..11741
                     /gene="rplE"
                     /locus_tag="R8X70_001176"
     CDS             11196..11741
                     /gene="rplE"
                     /locus_tag="R8X70_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEF2928958.1"
                     /translation="MMRLKEKYDQSIKPALVKEFDIKNPMLIPAIEKIVISVGAGELA
                     KDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMFAFLDK
                     LISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKEAQKLLELIGVPFTKGK"
     gene            11743..11928
                     /locus_tag="R8X70_001177"
     CDS             11743..11928
                     /locus_tag="R8X70_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003948630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEF2928959.1"
                     /translation="MAKKSMIAKAARKPKFKVRGYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            11938..12333
                     /gene="rpsH"
                     /locus_tag="R8X70_001178"
     CDS             11938..12333
                     /gene="rpsH"
                     /locus_tag="R8X70_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEF2928960.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRVSKPGRRVYKGKEEIKRFKNGYGT
                     IVVSTSRGVLANDEAYKAGVGGEILCTIW"
     gene            12411..12947
                     /gene="rplF"
                     /locus_tag="R8X70_001179"
     CDS             12411..12947
                     /gene="rplF"
                     /locus_tag="R8X70_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEF2928961.1"
                     /translation="MSRIGKQPIAIPSGVEVKLEGNLLKFKKGNLAKELDTKANVNVE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIIVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEITVDKNNVIIKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            12957..13313
                     /locus_tag="R8X70_001180"
     CDS             12957..13313
                     /locus_tag="R8X70_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEF2928962.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIATEFAKVLKAKQIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            13325..13768
                     /gene="rpsE"
                     /locus_tag="R8X70_001181"
     CDS             13325..13768
                     /gene="rpsE"
                     /locus_tag="R8X70_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEF2928963.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
     gene            13773..14165
                     /locus_tag="R8X70_001182"
     CDS             13773..14165
                     /locus_tag="R8X70_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEF2928964.1"
                     /translation="MNLTKAAGSTHKIKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFTSKIAKPYVINVEKITAVKELNEITIESIKSVHKISKSV
                     TKIKLIGASAKDLASKIKDENISVTGSK"
     gene            14165..15430
                     /gene="secY"
                     /locus_tag="R8X70_001183"
     CDS             14165..15430
                     /gene="secY"
                     /locus_tag="R8X70_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEF2928965.1"
                     /translation="MNKALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDGMQKYM
                     QIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMIENLNMFIALCAISMLAGTMLLM
                     WIGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFVILALILIT
                     IGVIIYVELGERRIPISYSRKVVMQNQNKRIMNYIPIKINLSGVIPPIFASAILMFPT
                     TILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTANYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFNFGGTSVLI
                     VVQVALDTMRKIEAQIYMNKYQTLNAIGL"
     gene            complement(15492..16751)
                     /locus_tag="R8X70_001184"
     CDS             complement(15492..16751)
                     /locus_tag="R8X70_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2928966.1"
                     /translation="MKKKSYKFHPNDTKLDKKMVEITEKSGFKIAVFSMAAMTMLGSV
                     VISSALPAINRHFEDILIQSGANMQTNFTLAHLDILVRLVLTLPAIFVMILSPFAGIL
                     MDKLGKLKFVFPAMIVWTLAGVSGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY
                     YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLIAMI
                     YLFEPRKFKFYNHTKIEEKTNYWKFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDP
                     KFIGISMSISALCYGIFSLSYKYIMRFLSIKMIYIATLFIVGCSFLILFLIDDFIAVL
                     FALALLGMGGGIMLVNNTAYLFSICPENARARAYGILASCIFLGQFLSPIISQPIVRQ
                     LGLVDAFLIWAILNFIVCIVFLFLKQR"
BASE COUNT         6230 a         2453 c         3228 g         4987 t
ORIGIN      
        1 taaaattata atttgattga tatttaaatt tatcaaagcg cacatcgttt tatttataaa
       61 tttaaatatc ttaaattttc aataaaagat ttattcaatt agcgattgct tttatcttta
      121 gaaatcaccc aaatcatacc cacaaaacct atcaacacaa cgacaaatat aaaaatgatt
      181 tgaaaaatat ccaaagctgt cataattctt ttgccctttc tttgagttgt ccacaagctg
      241 ctgaaatatc aagtcccttg ctctctctta tggtgcaagt tactccttta gcgcttaata
      301 aatcttgaaa tttgatcgca ttttcaagct taggacgatg ataaatacta ccctcgtgag
      361 gattgaaaag tatcaaattc actttggctt ttataccatt taaaagcttg accagttctt
      421 ttgcgtgttc aagtttatcg ttaatgccat caatgagtaa atactcaaac attattcttt
      481 ttctttgatc tataggaaaa gcacgcacag catccatgat cgcagctata ttataagctt
      541 tatttatagg catgagttcg gttcggagtt catcattaac cgcgtgaagg gagatggcaa
      601 gcaagacgcc taaattcatt tcacccagct ctttgatttg ctttgctaaa ccacttgtgc
      661 ttatggtttg tctgcgaggg ctgatagcaa gtccatcatt ttgagagaga attttaactg
      721 ccttggaaac atttttaaga ttgtcaagag gttctcccat gcccatatag actatattga
      781 cacgacgctc ataggggata ttgttttgtt ttttgatcca taaaatttgt ccgactatct
      841 ctcccgcgct caaatttctt tttaagcctc ctttggcagt aaggcaaaaa ctacagccac
      901 ttttacagcc tacttgggaa gaaacgcaaa tagtatatct tgtatgtgaa attcttttac
      961 cctcttcgtc aaattgttct tctttcatag gcaaaagtac actttctatc cttaagccat
     1021 cgataagttc aaaaagatat ttgatacttc catctttgct ttgttcattt ttaacgcatt
     1081 taagaggaga gaaatggtaa gtttgcgcaa gttctaaacg caaatctttt ggtagacttg
     1141 acatatcgga aaaattattt gcatattttt gatatatcca ttgataaatt tgtttcacgc
     1201 gaaacatagg cttgattttt tcttccaatt cttcaggtaa aaagtctaag atattaatga
     1261 gttctttcaa gatcgctttc ctttgattgc taaatataat gattaatttt taaatattct
     1321 tctagttttt cttttgcctt ttgatgattt tttataaaat cttcatgagc attttcattg
     1381 caaaaattag tcgcacataa aatgcattct gcatctatat ctaaattttt agccacgctt
     1441 aaaatcgaaa aagcttccat attttcagca aaaaaaccta gttttgcaaa ttcttttgct
     1501 gcttttgaat tttgacaaat ataattagaa gaattgactt tgattgtttc acgagaaaca
     1561 ttttgattgt tgagtttgat ttcaatgttt gcaggagtgt agaattgatc agaaatataa
     1621 gaaaattcaa tattacaagc atgagaactt ttataaattc ctagaatttc tcctttatcg
     1681 taaagtccac atgttcctat aaatataagt tttgaaggtt tttcttttaa gcaaagttgt
     1741 gttaaatgaa aggttgattc taccaaacct atacctatgg ttttggcaaa agaaaaattt
     1801 tcatttccac ccgcacaaac tatcattcac atatcctaaa aataatttag caagaatttt
     1861 agctaaaaag gcttaaaatt aagaattttt agctaaaata aaaaactatt atgatgaaag
     1921 caaaaaaaca ttacggacaa aattttttaa acgataaaag tattttatca aaaatcatcc
     1981 aagccatacc caaagatact gaaaatatag tagagattgg gcctggctta ggtgatttga
     2041 cgcaagagct tttaaaagtt tctcatgtaa aggcttatga gatagatgat gatcttatac
     2101 ctattttgcg taagaaattt caaaaagaac ttgattgtgg aaaattaaat ttgcttcatc
     2161 aagatgcaag taagctcgca tgttttgatg aaaagaagta ttttttggtc gctaatttac
     2221 cttactatgt cgcaagtcat ttgattttgc aagccttaga ggataaaaat tgctcaggtt
     2281 tgatagtaat ggttcaaaaa gaaatggcat tgaaattctg tgctcatagt ggagaaagtg
     2341 atttttcagc tcttggagtt ttaagtgcta tgatttgtga acgagaaata ctgtttgatg
     2401 tagagcctga atgttttaat ccaccgccaa aagtagtatc agcagtgatg aaaatgatta
     2461 aattcagagc ttatcaggat ctctgtgaaa ttcatgcttt taaagctttt ttgaaagatt
     2521 gttttaaagc gccaagaaaa caattattag ggaatttaaa aattcataaa gctaaattaa
     2581 cagagctttt tcaagagtta aaactcaatt taaatttacg cccacatgaa ctttgcgtcg
     2641 attcatacct taaaatttac gaaaaagtaa aggaagaata tgaacgaaaa caacaaagga
     2701 aatagtgaaa atacaaacaa tcctaactca aattcaaaaa acaacaagcg ctataaatac
     2761 agaaatcgta gaaaaaaatt agccgattct atcagtgaaa attctcaaaa ttcaactcat
     2821 gaattttcta acaatgaaaa gataaatacc aagaaaaatt ctacaaatac tcaaccttta
     2881 gagggtgaaa atgtagaaaa accaagtgag aaaaagaaaa aaagaaatcg caatctccct
     2941 tctaaactta ccggaaatga agattggcaa atcgcgcttg ctgagtgtat agaggcaaat
     3001 cgtgtttcac atgaaaatcg cttacatcct ttaaaataca ataattctag cgagcataaa
     3061 attcgcatca ctcctttagg aggtttagga gaaattggtg gaaatatcag tgtttttgaa
     3121 accaataaag atgcaattat agtagatata ggtatgagtt ttcctgatgg aactatgcat
     3181 ggggtagata ttatcatccc tgattttgac tatgtaagaa agattaaaga taaaattcgt
     3241 ggtatagtga tcactcatgc acacgaagat catatcggtg cagtgcctta tttctttaaa
     3301 gaattccaat ttcctatcta cgctacacct ttggctttag gaatgatttc aaacaaattt
     3361 gaagaacatg gcttaaaagc agaacgcaaa tggtttcgcc ctgtagaaaa acgccgtgtt
     3421 tatgagatag gcgaatttga tatagagtgg atccacatca cgcattctat cattgatgct
     3481 tcagcacttg cgatcaaaac aaaagcagga acgattatcc acacaggtga ttttaaaatt
     3541 gatcaaactc caatcgatgg ctatccaaca gacttaggac gtttggcaca ttatggagaa
     3601 gaaggggttt tatgtctttt aagcgatagt acaaattcgt acaaagaagg ttatacaaaa
     3661 agtgaaagct ccgtagggcc aacttttgat caaatctttg cacgtaccaa aggcagggtg
     3721 atcatgagta cttttagctc aaacatccac cgtgtttatc aagctattac ttatggttta
     3781 aaatacggca gaaaagtttg tgttatcggt cgttctatgg agagaaatct ttataccact
     3841 atggaattag gttatattaa gctcgataga aaaattttta ttgatgcaga tgaggttagc
     3901 aagtataaag acaatgaagt gcttatcgta accacaggaa gtcaaggtga aactatgagt
     3961 gcgctttata gaatggcaac agatgagcat aaatttataa aaataaagcc aagcgatcaa
     4021 atcatcattt cagctaaagc tatcccaggc aatgaagcga gtgtttcagc ggtgcttgat
     4081 tatcttttaa aagcgggtgc taaagtagcg tatcaggaat ttagcgaaat tcatgtaagc
     4141 gggcatgcaa gtatagaaga gcaaaaatta atgcttactc tagttaagcc taaattcttc
     4201 ttgccagtac atggagaata caatcatatc aataaacaca aagaaacagc tataaaatgt
     4261 ggaattcctg aaaaaaatat ttatctcatg agcgatggcg atcaagtaga actttgccaa
     4321 aaatatgtta aacgcataaa aaccgtaaaa acaggtaaag tttttgtaga taatcaaatc
     4381 aataaacaaa tcgccgatga tgtagttata gatcgtcaaa aacttgcaga tagtggtata
     4441 gtagttatta tcgcacaaat tgacaaagct acaaaaacac tgatcaacaa accaagagta
     4501 tttagctatg ggctagtagc tgacaaacac gatcatgctt tttctaaaga aatggcagag
     4561 gttttaggac aattttttgt caatgttaaa gatgaagtgc ttaatgatcc aagatttttg
     4621 gaaaatcaaa ttcgtcaagt attgagaaaa catattttta gaaagattaa aaaatatcca
     4681 accatagttc caactatttt tgtaatgtaa aaaagggcaa aaacgccctt tttaaggaag
     4741 atcaaatgag aattaataaa tttatatccc ataacacccg ctattcacgc cgtgaagccg
     4801 atgaacttat caaacaaggc ttagtaaaaa taaacaacaa aattgccctt ttaagcaatg
     4861 aagttaaatt tgatgataaa gtttttgtta aaggtaaaag agtacaaaaa agaacgcaat
     4921 ttagcgtgat aatctaccat aaacaaaaag gtgaaattgt cagtaaaaaa gacgatcgtg
     4981 gaagaaaaac tatatatgat accttgccaa gacaatttag tacttggctt agcgtaggta
     5041 ggctggatta tgcaagtgaa ggcttacttt tgcttacaga ttctcctgtg attgccgatg
     5101 ctttaatgca tagcgattta gaaagagaat actaccttaa agttaaaggc acagtgagca
     5161 aacaagtcat cgaagccatg caaaatggac ttgagattaa aaatgaaaaa aaaggcgcac
     5221 atgcaaaaac taaaattacc tctatgagtt ttgctccttt tatagacttt gaaatttttg
     5281 gatcaagtgg aggctatact aagcttagag tggttataaa tgaaggtaaa aatagagagc
     5341 ttagacgctt ttttggacat tttgatcttg aagtcatgga tcttaagcgt gttgcttttg
     5401 gggctttaga tcttggtatg ttgaaggcgg gaaaatatcg ttatttagaa aatggcgaat
     5461 atgaaaaatt aagagatttt ttaaaattta atgaaataag atattgacca ttatatacaa
     5521 aaatttaaaa aataatgata atttttaaat tctaaaaatt ctatttttat cctttttaaa
     5581 aggaaaataa tagaaaaatt tcatcaaatt ccttgacttt gaaaacaaga ttttatatac
     5641 tctcatttca atttttataa attggttagt ttttaactaa cgagttcttt ttaaaggaaa
     5701 tattatggaa agaattaggc ttaagctaaa agcttatgac catcgagtac tagacagaac
     5761 agttgcagca atcgtagaag ctgttaaaag aacaggtgcg gatatcagag gtccgatacc
     5821 aatgcctact aaaatcaaac gctatacagt tttaaaatct ccacacatta acaaagattc
     5881 tcgtgagcag tttgaaataa gaattcacgc gcgtatgcta gatatagtag cagcgactcc
     5941 agatacagtt gattctttaa ctaagcttga tttagcgcca gaagtaagcg ttgaagtaag
     6001 agctatgggt aaataaggat aaaatatgga atatattgta gaaaaaatag gaatgagtag
     6061 aacaattgct aatccaagta tcgctgtcac tttactaaga gttgtgaatg caaaagtatg
     6121 tgaagttgat aatggtaaag ccatcgttgc atactcaaaa ggaaaagtaa acaataaatg
     6181 tgttgcagga caacaaaaaa aatataatct ttctgcagaa tacaatagct ttgcaacttt
     6241 agaagtagca aacactgaag caggagattt ggatgaagct ccattaaatg aagcaaaagt
     6301 tttaaaagta agcttcaata ctaaaggtag aggttatagc ggtgttatga aaagacataa
     6361 cttcgcaggg ggtccagcaa gccacggttc tagatttcac agacgccatg gatctattgg
     6421 taatagagaa tggccaggtc gtgttcaacc aggtatgaaa atggcaggac actatggaaa
     6481 tactaaagtg accgttaaaa acgaagttgt atcttatgat gctgaaaata aaattttagt
     6541 agttaaaggt gcagtaccag gttataatgg tgctatgggt aaaataagga ttgcaaaatg
     6601 agtaaagtag ttgttttaaa tgataaatta gaaaaagcag gtgaacttga tttaccttca
     6661 aaatatgcgg aagtaaatcc acacaatctt tacttgtatg taaaatctta ccttgcaagt
     6721 ttaagagcaa atacagctca tactaaaggt agaagtgatg taagtggtgg tggtaaaaaa
     6781 ccttggagac aaaaaggtcg tggcggtgct agagcgggtt caacaagaac taacgtttgg
     6841 gtaggcggtg cggttgcttt tggtccaaca aatgaaagaa actacttcca aaaagtaaat
     6901 aaaaaacaaa aaagattggc gcttgaaaga gctttagcag ataaagcagc taaaggtgtg
     6961 ttatttactg ctgattcttt ggctattgaa agtggtaaaa caaaagatgc aaacgctgtg
     7021 attaaaaaac ttggcgtcaa agatgcttta atcgttaaag atttactaga tgaaaaaaca
     7081 cttttagctt acagaaattt agcaaattgc tatgtagttg atgtaactga agtaaatgct
     7141 tatttagtat ctgtatttaa tgctgttatt atggaaaaat cagcgttaga atctattaca
     7201 aaagagggat aattatggca gatattactg atataaagac tatactttac acagaaaaaa
     7261 gtttgaattt gcaagagcaa ggtgtcgtag ttattcaaac ttcgccaaaa atgactaaaa
     7321 caggcttaaa agcggtttta aaagagtatt ttggtgtaac tccaaaaagc atcaattctt
     7381 taagaatgga tggaaaagtt aagcgtttta gaggtcgttt aggtcaaaga aacgattata
     7441 aaaaattcta tgttaagcta cctgaaggtg ttagcttaga aagtatggag gcttaagatg
     7501 gcaattaaaa cttataaacc atatactcca agtagaagat atattacagg tttaagctct
     7561 gaagatatta cagcaaaacc aagtgtacgc tctttacttg tgaaacttcc agtacacgca
     7621 ggacgcaata gctacggaag aattacaagt cgtcataaag aagcaggagc gaaaaaactt
     7681 tacagaatta tcgattttaa acgtcgcaaa tttggtatag aaggaaaagt agaagcgatc
     7741 gaatacgatc catatagaaa ttgtagaatt gctttgattt cttataaaga tggtgaaaaa
     7801 agatatattc ttcaaccacg cggactcagt gttggtgata tcgttgcaac tgctgaaagt
     7861 ggacttgata taaaaccagg taatgcaatg aaacttaaaa acattcctgt gggtactatt
     7921 gttcataatg ttgagttaaa gccaggcaaa ggtggtcaaa tgatccgctc agcaggagct
     7981 tatgcgcaac ttatgggtaa agaagaaaaa tatgttatct taagacttgc aagcggtgaa
     8041 atgagacaag ttctagctga atgtatggca agtataggcg aagtaggtaa cgaagaatgg
     8101 gcaaatgtga ctatcggtaa agcaggtaga aatcgccata gaggtatccg cccacaaact
     8161 cgtggttcag ctatgaaccc agtagatcac ccgcacggtg ggggtgaagg taagaaaaat
     8221 tcaggccgtc atccagtaac tccatggggt aaaccaacca aaggtgcgaa aactcgtcgt
     8281 aaaaaagcta gcgataagct aataatttca agaagaaaag gaaagtaaga tggctagatc
     8341 actaaaaaaa ggtccttttg ttgatgatca tgtaatgaaa aaagtcatcg ctgctaaaaa
     8401 ggctaatgat aataaaccta ttaaaacttg gtctagaaga agtactatca ttcctgatat
     8461 gataggttta actttcaatg ttcataatgg caaaagtttt attcccgttt atatcactga
     8521 aaatcatatc ggttataaac ttggcgaatt tgctccaaca cgcacattta aaggccataa
     8581 aggttctgtg caaaagaaaa ttggtaagta agggataaga tatgagtaaa gcattaatta
     8641 aattcataag attatctcca actaaagcaa gattgattgc tagagaagtt caggggatga
     8701 atgcagaatt agctatggct agtttaaaat ttatgccaaa caagggtgcc aaatatatcg
     8761 caaatgcaat ttcaagtgca gtagcaaacg gcggttttga agcgaacgaa gtagtggtaa
     8821 aaagttgtcg tgtagatgct ggtgctgtat taaaaagatt tagaccacgt gctagaggaa
     8881 gtgcaagccg tattagaaaa cctacttcac atatcttagt agaagtagcg aaagcggaag
     8941 ttaaaactga agcaaaaaaa gcagtagcta aaaaaactcc tgttaaaaaa acaagtacta
     9001 aaaaagtaac ggcagaaaag gaaagctaat gggacaaaaa gtaaatccaa tcggtctaag
     9061 actaggaatt aatagaaact gggaatcaag atggtttcca actaaggcaa atttagtgga
     9121 aaatatcggt gaagattaca aaatcagagc tttcttaaaa agaaaacttt attatgcggg
     9181 aatcagccaa attttagtag aaagaactgc taaaaagctt cgcgtaactg ttgtagctgc
     9241 aagaccaggt attatcattg gtaaaaaagg tagtgatgtt gataatttaa gaaaagaatt
     9301 gcaagattta atcggtaaag atgtaaatat caacatcaaa gaagaaagaa aagcgggtgc
     9361 ttcagctcaa cttgctgctg aaagcgttgc aactcaactt gaaaaaagaa tcgcttttag
     9421 aagagcaatg aaaaaagtaa ttcaaggcgc acaaaaagca ggtgctaaag ggattaaagt
     9481 ttcagtttct ggtcgtttag gcggtgctga aatggcaaga actgaatggt atcttgaagg
     9541 tcgtgtgcca cttcatactt taagagcaaa aatcgattac ggttttgcag aagctagaac
     9601 tacttatgga aacataggtg ttaaagtttg gatctttaaa ggtgaagtat tgcaaaaagg
     9661 cttacaaact gaaaaaacag aagaaagtgc tccagctaaa aagcaaagac gcacaagaag
     9721 gagtaaataa tcatgttaat gccaaaaaga actaaatatc gcaaaatgat gaaagggcgt
     9781 aacagaggtt atgctaatcg tggaactgaa tttacttttg gtgaatttgc attaaaagca
     9841 actgaagcag gacgcattaa ttcacgccaa attgaagcag cgcgtatcgc tttaactcgt
     9901 tttgttaaaa gacaaggaaa aacttggatt agagttttcc cagataagcc tttgacaaaa
     9961 aaacctttag aaactcgtat gggtaaaggt aaaggtgctg ttgaggaatg ggtaatgaat
    10021 atcaagccag gtcgtatcat ttatgaaatg gcaggagtaa gcgaagaaat ggcaagagaa
    10081 gcattgactt tagctatgca taaacttcca tttaaaacta agtttgttac aagagagagc
    10141 caaaatgaaa tatactgaga ttaaagataa aacagcagct gagcttgcaa caatgctaaa
    10201 agaaaaaaag gtgcttttat tcactttaaa acaaaagcta aaaacaatgc aacttactaa
    10261 tccaaaagag attagcgaag ttagaaaaga cattgctaga atcaatacag caattaacgc
    10321 tttaaaataa ggataaaaaa tggcatttaa aagagaaata caaggcgttg ttgtgaaaat
    10381 cgcaggtgag aaaacagcga gtattttggt tgaaagaaaa gtggttcatc caagatatag
    10441 aaaaattgtt aaacgcttta aaaaatatct aattcatgat gagagaaatg aagttaaagt
    10501 gggagatacc gttgtggcgg ttgaatgtag accactttct aaaagaaaat catttcgctt
    10561 aaaatctgta ttagctacag gagttgagta atgattcaaa gttttacaag acttgcagtt
    10621 gctgacaata gcggtgcaaa agaattaatg tgtattaaag ttttaggtgg tagtaaaaga
    10681 agatatgcta ctgtaggcga tgtaattgtt gcatctgtaa aaaaagcttt accaaatggt
    10741 aaggtaaaaa aaggtcaagt agtaaaagca gttatcgtta gaactaaaaa agaaattcat
    10801 agagataatg gttctttgat tcgttttgat gaaaatgctg cagttattct tgataacaaa
    10861 agagaaccta tcggaactcg tatctttggg ccagtgggta gagaagttag atatggtggc
    10921 tttatgaaaa ttgtttcact agcaccggag gtattataat ggcggttaaa ttaaaaatca
    10981 aaaaaggtga tagcgttaaa gttatcacag gtgatgacaa aggtaagaca ggtaaagtgt
    11041 tagcagtata tccaaaaaca cttaaagtag ttgttgaggg atgtaagatt gctaaaaaag
    11101 ctataaaacc tagcgagaaa aacccaaatg gtggttttat caataaagaa atgccaatgg
    11161 atatttccaa tgtggcaaaa gttcaggagt aagcgatgat gagattgaaa gaaaaatacg
    11221 atcaaagcat caaacctgct ttggtaaaag aatttgatat taaaaatcct atgcttatcc
    11281 ctgcgataga aaaaatcgtt attagcgtag gtgcgggtga gcttgctaaa gatcaaaaag
    11341 tattgcaaaa tgttgcagat actatttctt tgatagcagg acaaaaggct gtgattacta
    11401 aagctaaaaa atcagttgca ggatttaaag tgcgtgaagg ttttcctgta ggtgtaatgg
    11461 taactttaag aaaagaaaat atgtttgctt ttcttgataa attaatttct attgctttac
    11521 caagagtgaa agactttaga ggtttaagta gagatggttt tgatggaaga ggaaattaca
    11581 atttcggtct tgatgagcag ttgatgttcc cagaagttga gtatgataaa attttaagaa
    11641 ctcatggtat gaacatttct atagttacaa cagcacaaaa cgataaagag gcacaaaagt
    11701 tgttagaact tatcggtgtg ccatttacaa aaggaaagta agatggctaa aaaatcaatg
    11761 attgcaaaag cggcacgcaa acctaaattc aaagtaagag gctatacaag atgccaaatt
    11821 tgtgggcgtc cgcattcggt ttatagagat tttggaattt gtagagtttg cctaagaaaa
    11881 atgggtaatg aaggcttgat tccaggtctt aaaaaagcaa gctggtaagg aaataaaatg
    11941 ataaatgata taatttcaga ttcactaaca agaattcgca atgccggaat gagaaagctt
    12001 gaaacaacca agcttttgca ttctaaagtt gttgaagctt tagttggaat tttccaagct
    12061 aaagggtata ttgaaagttt taatgttatc gaagaagata aaaagaaatt tatcaatgta
    12121 gttttaaaat acgatgaaaa aggtaaaagc gttattaacg aacttaaaag agtttctaaa
    12181 ccaggtcgtc gtgtttataa gggtaaagaa gaaattaaaa gatttaaaaa cggttacggt
    12241 actatcgtag ttagcacaag tcgtggcgtt ttagcaaatg atgaagctta taaagcaggt
    12301 gttggcggcg aaattttatg taccatttgg taaaaatctg ctttttatgg cattgggtat
    12361 ccattctttt aaaaaagtag aaatatccta gacaaataaa aaggaaaaat atgtctcgta
    12421 taggtaaaca accaatcgct atccctagtg gagtagaggt taaactagaa ggaaatttgc
    12481 ttaaatttaa aaaaggaaat ttagcaaaag agcttgatac aaaagcaaat gtaaatgttg
    12541 agattaaaga taataatatt cttttttctc caaaaggtga agatagacaa agtagagcat
    12601 attggggaac ttatagagct ttagcttaca atatcattgt aggcttaact caaggttttt
    12661 caaaaactct tgaaatcaac ggagtgggtt ataaagctgc tttaaaaggt aaagttttag
    12721 aattaagcct tggtttttca catcctatca actatgatat tccagaagga attgaaatca
    12781 ctgtggataa aaacaatgtt atcattaaag gaagtgataa acaagtagta ggacaagttg
    12841 ctgctcaaat tcgtgaattt agaccacctg agccatataa aggaaaaggc gttaagtatt
    12901 ctgatgaacg cattatccgc aaagctggta agacatctaa aaagtaagga taggcaatga
    12961 gagcaaatgt actaaaaaga aaactaactt taagaattaa aagaaaaaaa agaattagag
    13021 caaaaatttc aggatgtgaa aacttcccaa gaatttctgt ttttaaatca aatagaactc
    13081 tttatatcca agcgattgat gatgttaaag ctgtaacttt agcagcagta gatggacgca
    13141 aacttggcgt taaagcaaac aaagaaggtg ctaaaaaaat cgctactgaa tttgctaaag
    13201 ttttaaaagc taagcaaata gaacaagctg tgtttgatag aaatggttat gtatatcacg
    13261 gagtaattgc agcattagct gaatctttaa gagaaaatgg tattaggcta taaggggtaa
    13321 atcgatggaa aaatataata gagaagaatt tgaagaagta atcgtcgata tcggcagagt
    13381 tactaaggtt gttaaaggtg gtagaagatt tagatttact gctttagtta ttgttggaaa
    13441 ccgcaaaggt ttagtaggtg ttggttatgg caaggctaaa gaagttcctg atgctattcg
    13501 caaagcagtt gatgatgcat ttaaaaatat cgttgaagta aaaactaaag gatcaactat
    13561 tgctcacgat gttgaagtaa aatacaacgc aagtagaatt ttacttaaac cagctagcga
    13621 aggtacggga gttatcgcgg gtggttctac tcgtcctatc gtagagcttg cgggtattaa
    13681 agatatctta actaagtctt taggttcaaa taactcagct aacgtggttc gtgctacaat
    13741 caaagcttta acaatgctaa aaggataaga agatgaattt gacaaaagca gcgggatcaa
    13801 cgcataaaat caaaagaata ggccgtggcc aaggaagtgg aatgggtaaa accgccacta
    13861 aagggggcaa aggtcaaacc gctagaaagg gttataatga aaaaagaggt tttgaaggag
    13921 gtcagcaacc tcttcaaaga agattaccaa aagttggttt tacttctaaa atcgcaaaac
    13981 cttatgtgat taatgttgaa aaaatcacag ccgtaaaaga gcttaatgaa attacaattg
    14041 aaagcatcaa aagcgttcat aaaatttcaa agtctgttac taaaattaaa ttaatcggtg
    14101 caagtgcaaa agacttagca tcaaaaatta aagacgagaa tatcagcgtc accggatcaa
    14161 aataatgaat aaggcattga cgaataagat tttaatcacc ttagctttct tgtttgctta
    14221 tagggttctg gcttatgtgc cagttcctgg cgtcaatgct gatgtgattg cggaattttt
    14281 taacaataat caaaacaatg ctttgggttt atttaatgtt tttagtggtg gggcagcaga
    14341 acgcttttct atcatttctt taggtattat gccttatatt actgcttcga ttatcatgga
    14401 gcttttagca gctactttcc caaatatcgg taaaatgaaa aaagaacgcg atggtatgca
    14461 aaaatatatg caaattatcc gttatgcaac tatagtaatc actttagttc aaagtatcgg
    14521 tgtggctata ggacttcaaa gtttacatgg aagaggtgga gcaggcgcta taatgataga
    14581 aaatttaaat atgtttattg cgctttgtgc aatttctatg ctcgcgggaa ctatgctttt
    14641 gatgtggata ggtgaacaaa tcacacaaag aggtatagga aatggtattt ctttgattat
    14701 ttttgcaggt attgtttcag gaattccaag agctatttcg ggtacagtag gacagataaa
    14761 ttcaggcgaa atgaatttct taaccgcttt tgttatcctt gctttgattt taatcactat
    14821 tggcgtgatt atatatgtag agcttggaga aagaagaatt cctatttctt actcgcgtaa
    14881 agtagtaatg caaaatcaaa ataagcgtat tatgaactat attccaatta aaatcaattt
    14941 aagtggagtt attccgccga tttttgctag cgctatttta atgtttccta cgactatttt
    15001 gcaaacaagt acaaatccgt atttgcaagc tatcaatgac tttttgaatc caaatggtta
    15061 tttatttcat gttttgactt tcttgtttgt gattttcttt gcgtattttt atgcttctat
    15121 agtatttaac gctaaggata tagcggaaaa tcttaaaaaa caagggggtt ttatccctgg
    15181 aattcgtcca ggcgaaggga cagcaaatta tcttaatgaa gtagcttctc gtcttacttt
    15241 atcgggttct atttatttag gacttgtagc aaccttgcct tgggttttgg ttaaattcat
    15301 gggtgtacct tttaattttg gaggtacttc tgtattgatt gtagttcaag ttgcattgga
    15361 tacaatgaga aaaattgaag ctcaaattta tatgaataaa taccaaacct taaatgcaat
    15421 aggtttataa acttttaaca caaggaggag atatctcctt gtgttttata ctttctataa
    15481 aaagcgattt ttcatctttg ttttaaaaat aaaaatacaa tacaaactat aaaatttaaa
    15541 atagcccata ttaaaaacgc atcaacaagt cctaattgtc ttactatagg ctgagagata
    15601 atcgggctta agaattgccc taaaaatata caactagcta aaattccata agctctagct
    15661 cgtgcatttt caggacagat tgaaaaaaga taagcagtgt tatttacaag catgatacct
    15721 ccacccattc caagcaaggc taaagcaaat aaaacagcga taaaatcatc aatcaaaaag
    15781 agtatcaaaa aagaacagcc cacaatgaat aaagtagcaa tataaatcat tttaatactt
    15841 aaaaaacgca tgatatattt gtaacttaga gaaaaaatac cataacaaag tgcagaaatt
    15901 gacattgaaa tccctataaa tttaggatct aagcctagat gctcttctat ataataagga
    15961 agttgtgtag gggatatata ataaaccacc atgataaaaa atcctataaa ataaatagga
    16021 aaaaatttcc agtaattagt tttttcttct atctttgtat gattgtaaaa tttaaatttt
    16081 cttggctcaa aaagataaat catggctatg agggtgatta aaattccaag cccataaacc
    16141 aaaaaaggat agcgccaaga ataacttgaa acaaagcccg ctatagagat aaacactgca
    16201 ccacctaccg cacaaaaaaa gccttgaaga cttaaggcat tttctctacg gttaaagcca
    16261 ccacgactat aataatctcc cagcaaagcc gaagcacccg tcattataaa agccgttgcc
    16321 atcccaaaaa tagctcttga agtgagtata gcataaatat catttaagaa aaagccactt
    16381 actccagcaa gtgtccaaac aatcattgca ggaaaaacaa attttaattt acccagttta
    16441 tccattaaaa ttcctgcaaa aggagataaa atcataacga aaatagcagg tagggttaat
    16501 actaaacgca ctaaaatatc aagatgcgct agggtaaaat ttgtttgcat atttgcacct
    16561 gattggatta aaatatcttc aaaatgtcta ttgattgcag gcagtgctga tgagattacc
    16621 acgcttccta gcatagtcat tgccgccatg gaaaatactg cgattttaaa gcctgatttt
    16681 tctgtgatct caaccatttt tttatctaat tttgtatcat tggggtgaaa tttataagat
    16741 tttttcttca tatttgaacc tttttagttt tattatactc aaaaattttt cttttgtatt
    16801 taaaattact tctatttgta atttatactc ctgtttttca tttgtataga taaaatatct
    16861 ttcattataa gtagaatttc aaaaattttt agctaaat
//
LOCUS       DAQUWA010000042        16116 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.042, whole genome shotgun sequence.
ACCESSION   DAQUWA010000042 DAQUWA010000000
VERSION     DAQUWA010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16116
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.042"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            269..2206
                     /locus_tag="R8X70_001185"
     CDS             269..2206
                     /locus_tag="R8X70_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEF2928967.1"
                     /translation="MIGARFICGSKILFKSVKEKFDSILQTNKNEFAQILLANFKDFN
                     LPFIKQEFNIKKDFGGLDHLRALESLLTLFKNSPKNYALNFMDEKNVSELRLAADFLL
                     SLKSAINLQSNKDQDEFLFSNIHEIAELMYRKGKKNLDAEKILVQKALQSMHTIGFYT
                     HFLAYKIQNELQNIAQKQYRFKNLAEALTFLLGFKDQDIAFDLDLVFALKNLSYGKKD
                     LEKALALFEKIFYKRHSFCILKLLLDSGILKELCKPFGMVRFLSDEEGDYSFDEQAFL
                     LLKEFEKYEDELESLKNLNTDEKMILKLVILLSAINNENEISLASIYRAYCIKFNLKN
                     DIFELGLRIFKNHNALKELAEKEDVYNPIIICALLSKVENLKTLELLHTLTWLKAKAL
                     NRNPFFYKVIDRILENAKQGFDDENLLDETARRVKKELTLKRTKLFLEQNAILQDKIT
                     HIKSNLFIIKNTFEDIVEIARFAKENDFKFWFSNSTNLSLQIVAFKDFKIEIVLTALA
                     NLNLVFMNLFELFDDKIYLRFEYDNIITDEQKNKLCELLNSNLSGFSSRKIKKPIIKK
                     DELKLDLNYSKIYAKLSLNTKDQQGLMAYMMNIFNELGLVLSAAKIQTIRQRTRNTFI
                     FQKNENLEKNEEKLLISLISE"
     gene            2210..4006
                     /gene="glmS"
                     /locus_tag="R8X70_001186"
     CDS             2210..4006
                     /gene="glmS"
                     /locus_tag="R8X70_001186"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEF2928968.1"
                     /translation="MCGIVGYIGKNEKKHTILSGLKELEYRGYDSAGLAVMKNGELDF
                     FKAVGKLENLANKCANFTSEEFGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGII
                     ENYKEIKNKLEDQGVSFLSQTDTEVIVQLFEFYAEKMEVFEAWKKTIEELRGAFATLL
                     VSKKDPTRVFFAKNAAPLIVGKSQNNEFYFASADTPLIGLCDEVIYLEDLSLGYANEK
                     ELVIYENNQLKQNSFTKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRINGDEV
                     VFDELENEDLSTVDEITLCACGTSYHAAMASAYLFERLARVKAKVEIASEFRYREAII
                     KPNSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFIAQKKKIDMSAQIKALLHTPNCVVVSAKLHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKTLLYEKTKSNVEELIARDSTVLCVSPLDFDLSDDFIKTNEQDHYMCEFFEM
                     MVITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            4141..5532
                     /gene="fumC"
                     /locus_tag="R8X70_001187"
     CDS             4141..5532
                     /gene="fumC"
                     /locus_tag="R8X70_001187"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEF2928969.1"
                     /translation="MEYRIEHDTMGEIKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKSAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PALDELIATFEKKVKEFEGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSEKVSEELSKLIGTKFVSSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELNIPENEPGSSIMPGKVNPTQCEAITM
                     VAVQVMGNDAAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NREKIEYNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESAMELGLVSEEDFA
                     KFVDPAKMIGPKA"
     gene            complement(5579..6622)
                     /locus_tag="R8X70_001188"
     CDS             complement(5579..6622)
                     /locus_tag="R8X70_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEF2928970.1"
                     /translation="MQTGKIFLICFILVVLSLLLYLFKGFLLVIIIASLMAVATSNAN
                     AKFLSLTNGRKFLASMLTTACMVLLFFAPFVYAMIELAKALKNFDINLVTQTLNYVKN
                     YQFTLPESLSFLEPKIKEFLASIDLNSISKQILNYASSFTKSGAKFLIDMVLICIFYF
                     FANLYGTELVIYIKSVIPIDKQELDDILSEVGNVMAVVLYSMIIIAILQGALFSIIAM
                     FYGYDAILMGVIFAVSSLIPALGGALVYIPISLYEFASSGLGSALVIFIYSVVVISFI
                     ADTLVKPLIIKWINEKLVKTPAKINELLIFLAMIAGISTFGFWGIILGPAILTFFIST
                     IRLYMILKDKNLI"
     gene            complement(6632..7642)
                     /gene="ruvB"
                     /locus_tag="R8X70_001189"
     CDS             complement(6632..7642)
                     /gene="ruvB"
                     /locus_tag="R8X70_001189"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEF2928971.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQENIKKNLNVFISA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLS
                     EGDVLFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDEELAIILQKAALKLNKSCENEAALEIAKRSRSTPR
                     IALRLLKRVRDFADVNDEETITKERAKEALNSLGVNELGFDAMDLRYLELLTEAKRKP
                     IGLSSIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASTKSFSVLKLNYEQTLFD
                     EN"
     gene            7734..8144
                     /locus_tag="R8X70_001190"
     CDS             7734..8144
                     /locus_tag="R8X70_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HEF2928972.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            8145..8503
                     /gene="ssrA"
                     /locus_tag="R8X70_001191"
     tmRNA           8145..8503
                     /gene="ssrA"
                     /locus_tag="R8X70_001191"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            8710..10980
                     /locus_tag="R8X70_001192"
     CDS             8710..10980
                     /locus_tag="R8X70_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEF2928973.1"
                     /translation="MKKNASSKILLSLGVATLLYSSAFAQEINLTQSSDVGNYFEENG
                     KDINLKNPDKYKGQDLNIKMGVWDLPNDDYDSADYRLNIDIGKNNTLSFTHNNDQNPV
                     YVTNLNATAKEVKTTDIVLQAFAPSVINGNLTMTSSGAGAITEDEQKGSGIILYNGVE
                     GKSANGSLTINGNFTADKTLFAAYGNFVKVNGTANLTNSNFGLMKHSYTDLEANNVVI
                     VQAKDFNENILKANNNAGALLLKFAGDYISTDVQGKDPLEAATIIDISDEDKYGDGEK
                     GLVDYKLSVQNCGGNKCLVINGGATAAAKDKLVQLQVDIDTIDKLLKNEFDSSQGEEW
                     EQAKETLKKQQAEIQTMLEEAKKNGGKIDDEKYIDLVNKNLNLNLSANDKASILALRS
                     ITEQLGSIGADLASREGVKLALDIKKDTDNTGKSVSNLNSASSAVNTTMNISNDVSIG
                     SRVAMLNNPFGTYASKMNGLKFAALDSDMRPSYVNEYTNSVWANAFGGANIIDGDSGA
                     MYGATVGVDKQANDDVLWGAYFTYANAKIKDNNLEQKSDNFQLGMYSTINVAPQWELN
                     LKAYAQVSPTKQDNVQIDGAYNSDYTSKFLGLSANAGRVFDFSDNTLFIKPFAGVNYY
                     FSYTPSHTENGAIAKDIDSMKNNSVSVEVGAEFRKYMNENSYIFVTPKIEQFVINSGD
                     DYTANLAVNNAFFTSVEANNKKKTYGQIIVGGNVDFTNQLSMNLGFGAKQILAGKVDN
                     KNETYLSGQVGLKYKF"
     gene            complement(11122..13206)
                     /locus_tag="R8X70_001193"
     CDS             complement(11122..13206)
                     /locus_tag="R8X70_001193"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEF2928974.1"
                     /translation="MQTNPNMFLNRELSWLRFNSRVLDQCSRPLPLLERLKFVAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNISSSDEMSPLQQLKAIRKYLHKEKDLLEHYFNEIIS
                     DLEKENLFIKNYENLDNNLKQKCDEYFFSTIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKTHPELIKFGMIRIPRVLPRFYEVSANVYVPIESIVEKHTEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKI
                     FHKDVYEYSILLNLPSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAIDKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGIQVTVMV
                     ELKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRKKGDKLKFYMHLSTG
                     NYNASSAKIYTDVSYFTSKVEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKILE
                     MIALEASKGSEGVIIAKMNSLVDSDIIKALYEASIKGTQIDLIVRGICCLKPNEEFSK
                     NIRVRSIIGKYLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNLLAYELQNDGEYAKVASNEKVIDSQQILEEYVSKIYKTLKKDTDQSR
                     ATHLASKLFKEN"
     gene            13388..13879
                     /gene="nrfH"
                     /locus_tag="R8X70_001194"
     CDS             13388..13879
                     /gene="nrfH"
                     /locus_tag="R8X70_001194"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HEF2928975.1"
                     /translation="MKKSLNLFGIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNN
                     CHIMNEVYNEYMAGPHAQKVKGEARATCVDCHLPHGFLAKWIAKAESGLNHAYAFTFK
                     LDELPTNLSATEKSRNMIQDNCVRCHADFAQTAINATTNPHADKSLKCASCHQDVGHK
                     HGI"
     gene            13895..15727
                     /locus_tag="R8X70_001195"
     CDS             13895..15727
                     /locus_tag="R8X70_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HEF2928976.1"
                     /translation="MKKNFLRLAIVVLVLLIVGVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDNPNFERWGKVFPEQLKMYLTVEEEEPKATEFGGNLSYSKLIRFPQLTILW
                     AGYPFSLDFNEERGHFWVQVDQMKTARNNKDFLNAHGLKAFKGQPAACMNCHSGWTPW
                     LINNIAKGDFVAFNSTNYWTMIKNVPAVDGIVENSPEHAGPHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVARGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIADDSSKKWWDGTQKNYDEYEFWRDGNQPKEIEANGIMLTFPWNEWKKDQPFRI
                     EMLDDYYDKVRNVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCADCHMPYV
                     REGAKKISQHNITSPLRDINSACKTCHKQSEDYLRAQVRDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQTDGKADASKISEELKEVLELHRKSQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMAKTGQIKLIEIANANGINDFKTSNLGFEDMQKFNPGELYYKV
                     DVNGHKAGERYYGDEIEVNGNPPKELLEHDKNLAPYNYQVIDKK"
BASE COUNT         5614 a         2298 c         2858 g         5346 t
ORIGIN      
        1 agtattaaag gaatgttttg aaaatttttt gcctacaagc gataatatac ccttttgtgt
       61 tttggcaagc aaaggatatg caaaaaataa tctttgcgca aatgaaagcg tttctttgat
      121 ttttgtttat aaggatatta aagcttatca tttaaaacct atgattaaag cttttataga
      181 gatattaaat gatgtgcatt tgcaaattga ttatgtggtt ttagaactaa atggacttta
      241 taatgctagc aatgagctta aaacaaccat aataggtgct cgctttatat gtggatctaa
      301 aattttattt aaatcagtca aggaaaaatt tgatagcata ctccaaacaa ataaaaatga
      361 atttgctcaa attttacttg ctaattttaa agattttaac cttcctttta tcaagcaaga
      421 attcaacata aaaaaagatt ttgggggctt agatcactta cgagctttag aaagcttgtt
      481 aactcttttt aaaaattccc ctaaaaacta tgctttaaat tttatggatg aaaaaaatgt
      541 aagcgagttg cgcttagcgg cggatttttt attgtcctta aaatctgcta taaatttgca
      601 aagcaataaa gatcaagacg aatttttatt tagcaatatt cacgagattg cagaattgat
      661 gtatagaaag ggcaagaaaa atttagatgc tgaaaaaatc ttagtgcaaa aagccttgca
      721 aagtatgcat actataggtt tttataccca ttttttagct tataaaattc aaaatgaatt
      781 acaaaatatt gcacaaaaac aataccgatt taaaaattta gcagaagcat taactttttt
      841 gttgggtttt aaagatcaag atattgcttt tgatttagat ttggtttttg ctcttaaaaa
      901 tttaagttat ggaaaaaagg atttagagaa agctttagct ctttttgaaa aaatatttta
      961 taaaagacat agtttttgta ttttaaaact tttacttgat agtggaattt taaaagaatt
     1021 atgcaagcct tttggtatgg tgcgtttttt aagcgatgag gagggggatt atagttttga
     1081 tgagcaagca tttttgcttt taaaagaatt tgaaaaatac gaagatgaac ttgagagttt
     1141 gaaaaattta aatacagatg agaaaatgat tttaaaatta gtcatacttt taagcgcaat
     1201 taacaatgaa aatgaaattt ctttagcgag tatatatagg gcttattgta ttaaatttaa
     1261 tctaaaaaat gatatttttg aacttgggct taggattttt aaaaatcaca atgctttaaa
     1321 agagcttgcc gaaaaagaag acgtttataa tcctatcatt atatgtgctt tgctttctaa
     1381 ggttgaaaat ttaaaaacct tagagctttt acatactctt acttggctta aagcaaaagc
     1441 tttaaatcgt aatccatttt tttataaggt tatagataga attttagaaa atgctaaaca
     1501 aggttttgat gatgaaaatt tacttgatga aaccgcaagg cgtgtaaaaa aagaattaac
     1561 actcaaaaga acaaagcttt tcttggagca aaatgctatt ttacaagata agatcactca
     1621 tataaaatcc aatcttttta tcatcaaaaa tacttttgaa gatattgttg aaattgcacg
     1681 atttgcaaag gaaaatgatt ttaaattttg gtttagcaat agtacaaatt taagtcttca
     1741 aatcgttgct tttaaggatt ttaaaataga aattgttttg accgctttag caaatttaaa
     1801 tttagttttt atgaatttat ttgagttatt tgatgataaa atttatttaa gatttgagta
     1861 tgataatatc attacagatg agcaaaaaaa caaactttgc gagcttttaa attcaaattt
     1921 aagtggtttt tcttcaagaa agatcaaaaa gccaatcatt aaaaaagatg agttaaaatt
     1981 ggatttaaat tattctaaaa tctatgcaaa acttagttta aatactaaag atcaacaagg
     2041 tttgatggca tatatgatga atatttttaa cgagttaggt ttggttttat ctgcagcaaa
     2101 aattcaaacc atacgccaaa gaacgcgtaa tacctttatt tttcaaaaaa atgaaaattt
     2161 ggagaaaaat gaagaaaaat tgttaatttc tttaataagt gagtaaatca tgtgtggaat
     2221 tgtaggctat ataggaaaaa atgaaaaaaa acataccatt ttaagtgggc ttaaagagct
     2281 tgaatatcgc ggttatgata gtgcgggttt agcagtgatg aaaaatggag agcttgattt
     2341 tttcaaagct gtaggtaagc ttgaaaattt ggccaataaa tgtgcaaatt ttacaagtga
     2401 ggaatttggt tttgctatag gtcatacacg ctgggcaacc catggaaaac ctactgaaat
     2461 caatgcacat cctcatttgg gtcagtattc ttgtgtgatt cataatggta ttatagaaaa
     2521 ttataaagag attaaaaaca agcttgaaga ccaaggagtg agttttctaa gccaaacaga
     2581 tacagaggtt atagttcaac tttttgaatt ttatgcagaa aaaatggaag ttttcgaggc
     2641 ttggaaaaaa acaatagaag agcttagagg tgcttttgcc acacttttag tgagtaaaaa
     2701 agatcctact cgtgtatttt ttgctaaaaa tgccgctcct ttaatcgtag gaaaatctca
     2761 aaataatgaa ttttattttg caagtgctga tacgcctttg atagggcttt gcgatgaggt
     2821 aatttatctt gaggatttaa gcttaggcta tgctaatgaa aaggaacttg ttatttatga
     2881 aaataatcaa ttaaaacaaa attcctttac caagctttca ggcgataaag cttatgcaaa
     2941 aaaagatggt tttcgctttt ttatggaaaa agaaatttat gagcaaagtc gcgtaatgag
     3001 cgaggttttg atggggcgca ttaatggtga tgaggtggtt tttgatgagc ttgaaaatga
     3061 ggatttaagt acagttgatg aaatcacact ttgtgcttgt ggaactagct atcatgctgc
     3121 tatggcaagc gcgtatttgt ttgagcgttt ggctagggtt aaggctaagg tagaaattgc
     3181 tagtgaattt cgctacagag aagccattat taagcctaat tctttattta tcgtaatttc
     3241 tcaaagcgga gaaaccgcag atactttaga agccttaaaa attgcaaaag agcaaggagc
     3301 taaaacattt gctatttgta atgtggataa ttccaatata gtccgtttgg cacacttaag
     3361 tcttctaacg cgcgcaggca ttgaaaaagg tgtagcttca accaaggctt ttgcaactca
     3421 agttttaaca ctttggatgt tggcaatttt tattgctcaa aagaaaaaaa ttgatatgag
     3481 tgcccaaatc aaagctcttt tacatactcc taattgcgtt gtggtaagtg ctaaattaca
     3541 tgaaaaaatt catcgtttat ctaagcgtta cttagacggc catggatttt tctttatagg
     3601 tagagatgtg ttctatcctt tagctttaga gggagcttta aaattaaaag aactctctta
     3661 tttgcatgct gaaggttatc ctgcaggaga aatgaagcac ggacctatag ctttggctga
     3721 ttctaagctt tatactatag ctttaatgcc taaaacccta ctttatgaaa aaaccaaatc
     3781 aaatgttgag gaattgatag ctagggattc tactgttctt tgcgtttctc ctttggattt
     3841 tgatttaagt gatgatttta taaaaaccaa cgagcaagat cattatatgt gtgaattttt
     3901 tgaaatgatg gtgatcactc aacttctagc gatggaaatt tctataagac ttggcaatga
     3961 tgtagatatg ccaagaaatt tagcaaaaag tgtaaccgtt gaataaaccc cgtgcagtta
     4021 taaaactgca cataaactct cataaattct aaaaaaataa ataaatttta aattataagc
     4081 taattttatg cttatttttg tttaaataat tgcataacaa ttttctagaa aggaaaccta
     4141 atggaatata gaattgaaca tgataccatg ggcgaaatta aagttccaaa tgacaaatat
     4201 tggggtgctc aaacagagag aagttttgaa aatttcaaaa ttggttgcga aaagatgcca
     4261 aaggtgctaa tctatgcttt tgcaaatctt aaaaagtcct tggctttggt aaataataaa
     4321 cttggcaagc tagatgatgc taaaaaaagt gctatagttc aagcttgcga tgagattatc
     4381 gcaggtaaat ttgatgataa tttcccactt gcaatttggc aaacaggatc aggcacacaa
     4441 agcaatatga atatgaatga agtgattgca aatcgtgcaa ctgaaatcat gggcggagat
     4501 tttcgtaaag aaaaacttgt acatccaaat gatcatgtaa atatgtctca aagttctaat
     4561 gatactttcc caactgctat gagtatagtt gcagtagaac aagtggagaa aaagcttatt
     4621 cctgcacttg atgagcttat tgctactttt gaaaaaaagg taaaagaatt tgaaggaatt
     4681 atcaaaatag gacgcacgca tttacaagat gctacaccgc ttactttagc gcaagaattc
     4741 agcggttatc tttctatgct tttacattca aaagagcaaa ttatcgcttc tttaccaacc
     4801 ttaagagaat tggcaatagg cggaacagcg gtgggaacag gacttaatgc tcatccagaa
     4861 ctcagtgaaa aagtgagcga agaacttagt aagcttatag gtacaaaatt tgtttcaagt
     4921 ccaaataaat tccatgcttt aacaagccat gatgctatta attttactca tggagctatg
     4981 aaaggcttgg ctgcaaattt aatgaaaata gcaaatgata tcagatggtt agcttcgggt
     5041 cctagatgcg gacttggtga gcttaatatc cctgagaatg aaccaggaag ttctatcatg
     5101 ccaggtaagg ttaatcctac acaatgtgaa gctattacta tggttgcggt tcaagtgatg
     5161 ggaaatgatg cggctatagg ttttgctgca agtcaaggaa attttgaact taatgtattt
     5221 aaacctgtga ttatctataa tttcttacaa agtcttgatt tacttgctga ttctatgcat
     5281 tcatttaata ttcattgtgc tgtaggtata gagccaaatc gtgaaaaaat agaatacaat
     5341 ctacacaatt ctttaatgct agtgactgca ttaaacccac acattggata tgaaaatgct
     5401 gctaaggtag ctaaaaatgc acataaaaaa ggtatttctt taaaagaaag tgctatggag
     5461 ttaggtttgg ttagcgaaga agactttgct aaattcgttg atcctgctaa aatgatagga
     5521 ccaaaagctt aaatctagtt tgatgtttct ctcttacgcg agagaaacat tttttatttt
     5581 aaattaaatt cttatctttt aaaatcatat aaagtcttat tgttgaaata aaaaaagtta
     5641 aaattgcagg tcctaaaata ataccccaaa aaccaaaagt tgaaattcca gctatcatgg
     5701 ctaagaaaat caaaagttca ttgattttag cgggtgtttt tacgagtttt tcattaatcc
     5761 atttaatgat taaaggctta actagggtat cagcgataaa agagataaca acaacagaat
     5821 aaataaaaat aacaagtgca gaaccaagac cgcttgaagc aaattcataa agacttatag
     5881 ggatatacac caaagctcca cccaaagctg gtatgagaga gcttacagca aaaattacac
     5941 ccattaagat ggcatcatat ccataaaaca tagcaatgat gctaaaaagt gctccttgaa
     6001 gtatggcgat aatgatcata gaataaagca ccacggccat aacattaccc acttcgctta
     6061 aaatatcatc aagttcttgt ttgtcgatag gaatgacaga ttttatatag attactaatt
     6121 ctgttccata tagattagca aaaaaataaa atatacagat taacaccata tctataagaa
     6181 atttagctcc tgattttgta aaacttgaag cataatttaa aatttgttta gaaatgctat
     6241 ttaagtctat agaagctaga aattctttga ttttaggttc taaaaagcta aggctttcgg
     6301 gtagggtaaa ttgataattt ttaacataat tgagcgtttg tgtgacaaga ttgatatcaa
     6361 aattctttaa agccttagct agctcgatca tcgcatagac aaagggagcg aagaaaagta
     6421 aaaccataca tgcagttgtt agcatagagg ctaaaaattt acgcccattt gttaggctta
     6481 aaaatttagc atttgcattt gaggtagcaa ctgccattaa acttgcaatg ataataacaa
     6541 gtaaaaaacc cttaaaaaga taaagtaaaa gggataaaac cactaaaata aaacagataa
     6601 gaaaaatttt tccagtttgc atttttttcc ttcaattttc atcaaataaa gtttgttcgt
     6661 aattaagctt aagtacacta aaactttttg tacttgctat acgacctttg gcagtgcgtt
     6721 ctatgtagcc atttgcaagc aaataaggtt cgattacatc ttcaatagta ttttcatctt
     6781 cactcaaagc tgccgctata ctagaaagtc ctataggctt tcttttagcc tctgttaaaa
     6841 gctctagata tcttaaatcc atcgcatcaa aaccaagctc attgacacct aaagaattta
     6901 atgcttcttt agccctttct ttagtgatcg tttcttcgtc atttacatct gcaaaatctc
     6961 tcactctttt taaaagtcta agtgcgattc taggggtaga gcgacttctt ttggcaatct
     7021 caagtgcagc ttcattttca cagcttttat tgagctttag tgcagctttt tgaagtatga
     7081 tagcaagctc ttcatcttta taaaattcaa gtctaaattg cattccaaaa cgatctctta
     7141 aaggattgct aagcattcct gcacgggttg tagcgccaat aagtgtaaat ttaggcaaat
     7201 cgatttttat agtttgtgct gcagggccac taccgatgat gatatctagc ctataatctt
     7261 ccattgcagg gtaaagtact tcttcaatag cagggcttaa gcgatgaatt tcatcgataa
     7321 aaagcacatc tccttcgctt aaattggtta aaattgcagc caaatccccg cttttttcta
     7381 tcataggagc cgcagttgtt ttgatatttg cacccatctc ataagaaata atattagcta
     7441 atgtagtttt gccaagtcct gcaggcccac taaaaagtat atggtctaag cattcatttc
     7501 ttttttttgc agcgctaata aaaacattta aatttttttt aatgttttct tgtcctatgt
     7561 agccatcgaa atttgaagga cgcagagaag tttcataagt ttcgtcaaaa gaatattttt
     7621 ctatttctac tattctgtcc atattttcat tcttatactt tggaaaatta aaataagatt
     7681 ttagctaaaa tttgctagaa tttacattaa actttaatga ttatggttta aaaatgggaa
     7741 ttttaacaaa attagaatta gattatgaaa ttgacgatat agaaaaattt ttacaatttt
     7801 ttagaaccat gtgcgatagg tttgaacctt taatcatcaa gcttggaagc gatagcgtgc
     7861 gttataaaga agccataaaa gagcttgaaa ctttagcaca caataccgct tgggcagcaa
     7921 gacgcttaaa tcttgaagaa gtgactgatt tttgtgtatt ttgtgaagag atgatggcgc
     7981 aagcaaatcg ctttaatggg cctgctagtg atgaatttac ggattggatg cttttgatga
     8041 gtgatcaatt tgaaaaatat tgtcgttcat atgaaaatga tgattctgtt ttagcggttt
     8101 ttaatccttt aattgttaat gttccaaata ttatttctaa ataagggagc gacttggctt
     8161 cgacaggagt aagtctgctt agatggcatg tcgctttggg caaagcgtaa aaagcccaaa
     8221 taaaattaaa cgcaaataac gttaaattcg ctcctgctta cgctaaagct gcgtaagttc
     8281 agttgagcct gaaatttaag tcatactatc tagcttaatt ttcggtcatt tttgatagtg
     8341 tagccttgcg tttgacaagc gttgaggtga aataaggtct tagccttgct tttgagtttt
     8401 ggaagatgag cgaagtaggg tgaagtggtc atcttttcta agcatgtaga tgtctttgtg
     8461 ggattatttt tggacagggg ttcgattccc ctcgcttcca ccatcacgct aattttaagt
     8521 aaatcataag tttatttcaa atttttagaa ttttttatat gaagttaaga tcgatttatt
     8581 acccttaaaa ctttgatata ttgggtttta taatttttca ttaaaaattt atagttttat
     8641 ttttaagctt atttttaggg gggggggtat aatttttcct tcagtttaaa tttattgaag
     8701 gagaaactta tgaagaaaaa tgcttcgagc aagatattgc taagcttagg tgtagcaact
     8761 ttgctttatt cgagtgcttt tgcacaagaa atcaatctta cacaatcttc agatgtggga
     8821 aattattttg aagaaaatgg taaggatatc aatcttaaaa atcctgataa gtacaaaggg
     8881 caagatttga atatcaaaat gggtgtttgg gatttaccaa acgatgatta tgatagcgct
     8941 gattatcgat tgaacattga tatcggtaaa aacaatactt taagctttac acacaataat
     9001 gaccaaaatc ctgtttatgt aacaaatcta aacgctactg ctaaagaggt taaaacaaca
     9061 gatatagttt tacaagcttt tgcaccttcg gtgattaatg gaaatttaac tatgactagc
     9121 tcaggagctg gagccattac cgaggatgaa caaaaaggtt caggtataat tctttataat
     9181 ggagttgaag gaaaaagtgc taatggtagc ttaactataa atggaaattt tactgccgat
     9241 aaaacccttt ttgctgctta tggaaatttt gttaaggtaa atggaactgc aaatcttaca
     9301 aattcaaatt ttggacttat gaagcactct tatacagact tagaagcaaa taatgtagta
     9361 atagttcaag ctaaagattt caatgaaaac attttaaaag caaataataa cgcaggtgca
     9421 ttacttttaa aattcgcagg tgattatatc tcaaccgatg ttcaaggcaa agatcctttg
     9481 gaagcagcaa ctataataga tattagcgat gaagataaat acggcgatgg agaaaaaggc
     9541 ttagtagatt ataaacttag tgttcaaaac tgcggtggca ataaatgctt agtgattaat
     9601 ggaggtgcta ctgcagcggc taaagataag ctagttcaac ttcaagtaga tatagatact
     9661 atcgataaat tgcttaaaaa tgaatttgat tctagccaag gtgaagaatg ggagcaagcc
     9721 aaagaaaccc ttaaaaagca acaagctgaa attcaaacaa tgttagaaga agctaagaaa
     9781 aacggcggta aaatcgatga tgaaaaatac attgatttag taaataaaaa cttaaattta
     9841 aatcttagtg ctaatgataa agcttctatc ctagcacttc gttctatcac agaacaatta
     9901 ggaagtatag gagcagattt agcaagtaga gaaggtgtaa aactagcttt agatatcaaa
     9961 aaagacacag acaacacagg taaatctgta tctaatctaa attcagcttc tagtgcagtg
    10021 aataccacta tgaatatttc taatgatgtt tctataggtt ctcgtgtagc aatgctaaac
    10081 aatccttttg gaacttatgc ttctaaaatg aatggtctta aatttgctgc tttagatagt
    10141 gatatgagac caagctatgt aaatgaatat accaatagtg tttgggctaa tgcttttggt
    10201 ggtgctaata ttatcgatgg agatagtggt gcaatgtatg gtgctaccgt gggagtagat
    10261 aaacaagcta atgatgatgt tttatggggt gcttatttta cttatgcaaa cgctaaaatc
    10321 aaagacaata atttagaaca aaaaagcgat aacttccaat taggtatgta ttctactatc
    10381 aatgtagctc cacaatggga acttaatctt aaagcttatg ctcaagtttc tccaactaaa
    10441 caagacaatg ttcaaataga tggtgcatat aactcagatt atacaagcaa attcttagga
    10501 cttagtgcta atgcaggtcg tgtgtttgac tttagtgata atactttatt tatcaaacct
    10561 tttgcgggag taaattatta ttttagttat actccatctc atacagaaaa tggtgctatt
    10621 gctaaagata ttgattctat gaaaaacaat tctgtaagtg ttgaagtggg tgctgaattt
    10681 agaaaatata tgaatgaaaa ctcttatatt tttgtaactc caaaaataga acaatttgtt
    10741 atcaatagtg gtgatgatta cacagctaac ctagctgtaa ataatgcttt ctttactagt
    10801 gtagaagcta acaacaagaa aaaaacatac ggacaaatta tcgtaggggg taatgtagat
    10861 tttacaaatc aactcagtat gaatcttggc tttggtgcta aacaaatact agcaggtaaa
    10921 gtagataata aaaatgaaac ttacttaagt ggtcaagtag gacttaagta taaattttaa
    10981 tcttaaaaat catttctaaa tctttttata gtttagaaat gattgtttat ttctatggga
    11041 aatctcctaa ggctttattt taaagtcctt ttttataata aacaagtaaa taagtcttta
    11101 gagtaaaaac cttaaaaact tttagttttc tttgaaaagt ttagaagcta agtgcgttgc
    11161 acgactttga tctgtatctt ttttaagtgt tttataaatt ttactgacat attcttctaa
    11221 aatttgttgt gaatcaatca ctttttcatt gctagcaact tttgcatatt ctccatcatt
    11281 ttgaagttca taagcaagta aattatcgct gagttgcaag cgcaagaatt gtgctaattt
    11341 tgccttactt ctttcatcat atataggagt cataagttct aaacgacgct ctaaatttct
    11401 tggcatccaa tccgcacttg atataaaata atttggctcg ctgtgtttaa aataaaacac
    11461 tctagcatgt tctaaatatt ttcctataat acttctaacg cgtatgtttt tgctgaattc
    11521 ttcattaggt tttaaacagc aaattccacg cacgataaga tcgatttgag ttccttttat
    11581 actagcttca taaagagctt ttatgatatc gctatctaca agagaattca tttttgcaat
    11641 gataactcct tcgcttcctt tgcttgcctc taaagctatc atttctagaa ttttttcttt
    11701 gatttgattt ggactcatag agagagtttg aaggcgacga tttttactaa atcctgaaag
    11761 tatatgaaaa aagcttgttg tatctcttgc aaattcaact ttgcttgtaa aataactcac
    11821 atcagtgtag attttagcac tgcttgcatt gtagtttccc gtgcttaaat gcatataaaa
    11881 tttaagctta tcgccttttt tgcgtataac ttgagaaact ttggcatgaa ctttaaagcc
    11941 agtgattcca taaatcacat gagctccagc attttctaaa gcttttgccc agtgaagatt
    12001 gttttcttca tcaaagcgag ctttaagctc taccataact gtaacttgta tcccatcgct
    12061 tgctgcatcg attaaggctt ggactatgtt agagtttttt tctactctat aaagagtcat
    12121 tcttatagaa ataacctcag gatctttgct tgcttctttg atgaacttat aaacaggatc
    12181 aaagctttca aaaggttgaa tgatgagtat atcttcttta tctatcgcat caaaaatgga
    12241 taaattttca tcaaaaggcg gtaaggtttt aggtgtataa aggggactta aaagatgagt
    12301 aaaggtttta ttgccagcaa tttgccaaag gctaggaaga tttaacaaga tagaatactc
    12361 ataaacatcc ttgtggaaaa ttttcatatg ggtattaaga aattctacga tttgttcatc
    12421 tgcatctttt tgaatttgta atcttacaaa agcacctttt ctacgaagtt ttaagccttg
    12481 ctctagtatc atcataaaat catcagcttc ttcctcttct atcaccatat ctgcatttct
    12541 agttacccta aaagcagctg aagcaaggag tttgtaacct ggaaaaattt cttctgtatg
    12601 tttttctact atactttcaa ttggaacata aacattggca ctcacttcat aaaaacgagg
    12661 taaaactctt ggaattcgaa tcattccaaa tttgataagc tcaggatggg ttttatcaca
    12721 aattttaacc gccaaagaaa atgaaagatt atttaggtgc ggaaaagggt gagttgcatc
    12781 cacagcgatt ggaacgataa caggaaaaat agtagagaaa aaatattcgt cacatttttg
    12841 tttgaggttg ttgtctaaat tttcataatt tttgataaaa agattttctt tttcaagatc
    12901 gcttataatt tcattaaaat aatgctctaa aagatctttt tctttgtgaa gatatttgcg
    12961 tatagctttt aattgctgca aaggagacat ctcatcacta ctgcttatat taactccagc
    13021 tgaaaaaagt tgttttaatc cggcaacgcg tatcatataa aattcatcca aattggtaca
    13081 atatatagct acaaatttaa ggcgttctaa taaaggcaac ggacgcgaac attgatctaa
    13141 tacccgtgag ttaaagcgta gccaagaaag ttctctattt aaaaacatat tcggatttgt
    13201 ttgcattaaa actccttttt tgcgttattt taacatttat ttttgaaaat aatgagtttt
    13261 ttagagaaat aaaattcaaa atttttattc cggttaatta agagtaaata tatctttaaa
    13321 tttatcttaa aaagctatat gttagaataa caatttcatt tattctgaaa gtttaaggag
    13381 gaaaattttg aaaaaatctt tgaatctttt tggtattttt cttgttttgc tttttgtgtt
    13441 ctttgcggta ggattttata ccttttataa tgcaaaaggt acatcttact taagtaatgc
    13501 aagtgaatct tgtaacaatt gccatattat gaacgaggtt tataatgaat atatggcagg
    13561 gccacatgca caaaaggtaa aaggagaagc tagggcaacc tgtgttgatt gtcatttacc
    13621 ccatggtttc ttggctaagt ggatagctaa agctgaaagc ggtttaaatc atgcttatgc
    13681 ttttactttt aaacttgatg agcttcctac aaatttgagt gcaactgaaa aaagcaggaa
    13741 tatgatacaa gataattgtg ttcgttgtca tgctgatttt gctcaaacag ccatcaatgc
    13801 tacaacaaat ccacatgcgg acaaatcttt aaaatgtgct tcttgtcatc aagatgtggg
    13861 tcacaaacat ggaatttaat taaggagaaa ttgaatgaaa aaaaattttt tacgcttagc
    13921 tatcgttgtt ttagttttgc ttatagtggg agttttatgg ctcaataatg atataaatca
    13981 aaaaaaagaa gacgaggcaa acaaaaatgc cattgctgca aatgcggatt tttctttact
    14041 tagcgatgat aatccaaatt ttgaaagatg gggaaaggtt tttccagagc aacttaaaat
    14101 gtatttaaca gttgaagaag aagagcctaa ggctacagaa tttggcggta acttatctta
    14161 ttcaaaactt attcgttttc ctcaactaac aatactttgg gctggatatc cttttagtct
    14221 tgattttaat gaagaaagag gacatttttg ggttcaagta gatcaaatga aaaccgcaag
    14281 aaataataaa gattttctta atgctcacgg acttaaagca tttaagggtc agccagcagc
    14341 gtgtatgaac tgccatagtg gatggactcc atggcttatc aataatattg caaagggaga
    14401 ttttgtcgca tttaactcta caaattattg gactatgatt aaaaatgttc ccgctgttga
    14461 tggtatagta gaaaattctc cagagcatgc aggaccgcat ggtggtaaga gaatgggtgt
    14521 gacttgtgca gattgtcata atccaaacga tatgagctta agacttactc gtcctgctgc
    14581 aattaacgct ttagttgcta gaggttatga aaaagatcca gtacaaggcg taaaagccac
    14641 aagagaagag atgagaactt tggtttgttc acaatgccat gttgagtatt attttaaacc
    14701 aacaggagaa aaagtaaaag taatgggcga aaccattgct gatgatagtt ctaaaaaatg
    14761 gtgggatggc actcaaaaaa attatgatga atatgaattt tggagagatg gcaatcaacc
    14821 aaaagaaatc gaagctaatg gtatcatgtt aacattccca tggaatgagt ggaaaaaaga
    14881 tcagcctttt agaatcgaaa tgttagatga ttattatgat aaagttcgca atgtatttgg
    14941 tgcagatttc actcataaat taacaggtgc gcaaatcatt aaaattcaac accctgaaag
    15001 tgagctttat agtggtggtg tgcatgctgc taatggagta agttgtgcgg attgtcatat
    15061 gccttatgtt agagaaggtg ctaagaaaat ttctcaacac aatatcactt ctccattaag
    15121 agatattaat tctgcttgta aaacttgcca taaacaaagc gaggattatt taagagctca
    15181 agttcgtgat atacaaaata gtgtagcgca tgatcaaaga acagctgaat atgctattgt
    15241 tagcctaatc atggatacta aaaaattgcg tgatgagtta ggcaatatgg aaaaattcca
    15301 aactgatggt aaagctgatg caagcaagat tagtgaagaa cttaaagaag ttttagagct
    15361 tcaccgcaaa tctcaaatga gagctgattt tgttaatgct gaaaattcaa caggtttcca
    15421 caatcctcgt gaggcttcaa gaatgctttt acaagctgta gatatggcta aaacaggaca
    15481 aattaaactt atagaaattg ctaatgctaa tggcattaat gattttaaaa cttcaaattt
    15541 aggttttgaa gatatgcaaa aatttaatcc tggagagctt tattataaag tagatgttaa
    15601 tggacataaa gcaggagagc gttattatgg tgatgaaata gaagtaaatg gtaatcctcc
    15661 aaaagaactt ttagaacacg ataaaaacct tgctccgtat aattatcaag taattgataa
    15721 aaaataattc ttaaaagccc tatattttag ggcttttttt atatctttca aaataaaatc
    15781 ttataatttt tatctgttta atgtttttat attttctatg cttttttaag cagtaaattt
    15841 ttatagataa aagtctatga ttaattttga gttgtttagt acacacgata agatggattt
    15901 ataaaaaata tagcacttgc ttaagaaaaa cgacaaaaat aatttttata gttttttaaa
    15961 attagaattt aaatcaatgc ttctttgctt taaatagatc gtttttaaat gaaaaataac
    16021 cgattttatc agtttttaaa ggaaaaataa tatgaaaaat tacaatttgt taagattttt
    16081 tagtaagaat acatcggttg aacaaattac tcctaa
//
LOCUS       DAQUWA010000043        14574 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.043, whole genome shotgun sequence.
ACCESSION   DAQUWA010000043 DAQUWA010000000
VERSION     DAQUWA010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14574
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.043"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            191..1999
                     /gene="typA"
                     /locus_tag="R8X70_001196"
     CDS             191..1999
                     /gene="typA"
                     /locus_tag="R8X70_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEF2928977.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNENPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     VKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPQNVRVRKRYLDPTQRKRMEKAKS"
     gene            1999..2649
                     /locus_tag="R8X70_001197"
     CDS             1999..2649
                     /locus_tag="R8X70_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HEF2928978.1"
                     /translation="MDLKSLENKRLYILKRLGILKFLSVVEALLVGFLAFVFIRDALI
                     AVILAVFVGVFFFRFTAKKLKLAQKELQINALNLFLRRFGAKIKKQSLSQKDFLKLGL
                     TKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILSANKNPSFENEEQIYIK
                     LQDKNFTLNHVFSKENHYLIATLTNPFFIDLKESLEKNFKNLENNLKLIEEKIIKI"
     gene            complement(2646..3995)
                     /locus_tag="R8X70_001198"
     CDS             complement(2646..3995)
                     /locus_tag="R8X70_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HEF2928979.1"
                     /translation="MQNLNQNEQIKCPSCGSFIDISTALYAQILDKAKQEMLKQKKEF
                     DDEVNAKRAEYTKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLTQKQNFQKE
                     FSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEE
                     AFKEFKEQESKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQ
                     GSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDSFGNICGSILYES
                     KRTKEFNKEWIDKLKLDSIAAKSDIAVLITKTMPKDKQKTHFKEGILICTFAEFKGVL
                     AVLRENIVNAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEK
                     RALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGLKSLENLAKDED"
     gene            4098..5300
                     /locus_tag="R8X70_001199"
     CDS             4098..5300
                     /locus_tag="R8X70_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEF2928980.1"
                     /translation="MQKHTKIHGFAKFKLIIILALMSSIAPLSTDMYLPALSHVEQSF
                     QTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDDI
                     YAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGI
                     LLEYFSWHSIFVTLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKR
                     FLVYILCASFALAAMFAYITGSSFVFTQFFGLSEQKFALLFGANALGFVICANINARL
                     VLKYESEKILAKALMIMFISTVILLVNAFFHPNFLLFELSIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGTVQFGFAGFISFVVGAINANTPIILAFVMCACVLVANMIYF
                     LIKIKEKK"
     gene            5297..5998
                     /locus_tag="R8X70_001200"
     CDS             5297..5998
                     /locus_tag="R8X70_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEF2928981.1"
                     /translation="MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQ
                     KEVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLKEQGVKEDEISYNSPNIID
                     RLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY
                     LYTKLNDIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            6207..7196
                     /locus_tag="R8X70_001201"
     CDS             6207..7196
                     /locus_tag="R8X70_001201"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEF2928982.1"
                     /translation="MYIVLILSLFLMPKFINWAKKNASQPIYEHAPQNHQIKSHTPTM
                     GGVIFVFCAIFASLLCIKFDNLFALMGLLCLISFCFIGVIDDLGKILKKNNHSGLSPK
                     AKMFGLIFASFLCLAPLYFSGILSADFYIPFYKYPLFNMYIFALFFWILVLISSSNAV
                     NLTDGLDGLATVPSIFSLATLGVFLYLSGNLIYSEYLFLPKINGLGELVVICAALICA
                     LMGFLWFNCYPAQIFMGDSGSLALGGFIGFLTVVSKNEILLLLVGFVFVLETISVILQ
                     VGSFKIWGKRVFKMAPIHHHFEKVGWVENKIIVRFWMIALLSNLLALASLKLR"
     gene            7307..8674
                     /locus_tag="R8X70_001202"
     CDS             7307..8674
                     /locus_tag="R8X70_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEF2928983.1"
                     /translation="MSNSTKTFIIVADIILFIALLALLPFETKVNQGLAILAFIAVLW
                     LSEALHVTITAILIPILAVIMGLMPTKSALHGFADPNIFLFFGGFALAAAMHFQELDK
                     IIAQRILMLARGNFALAALYIFFTTAFLSMWMSNTATAAMMLPLAIGMLSQLDYEENK
                     NTYVFVLLGIAFSASIGGIGTLVGTPPNAIVATNLNITFAQWLQYGIPIVIIFMPLMI
                     LVLYVTFKPNLKFQINTDLEQKIPMDTQKYITLIIFAIVAMCWIFSSYINPFVSNLLG
                     FEKKIANFDSVIAILAAVLVCAFRVVSWKKVQENTDWGVLMLFGGGITLSLVLKDSGA
                     SKIMADGIISLIAGGHLFLIGLLVSLFIVFLTEFTSNTASAALLVPLFISMAESLGAP
                     PLGLALIIGIGASCAFMLPVATPPNAIVFGTGYIKQSQMVRVGIYLNVLCSIIIALMA
                     YFFWL"
     gene            complement(8702..10204)
                     /locus_tag="R8X70_001203"
     CDS             complement(8702..10204)
                     /locus_tag="R8X70_001203"
                     /inference="COORDINATES: protein motif:HMM:NF024573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEF2928984.1"
                     /translation="MKLVKCKIENFRSYENTEFNFSDLGVIIGKNDVGKSTLFDALDI
                     FFENNKALEDDVNINSSENKFSITCFFQVESEMQINIDASESERTQTSLESEYLLNQE
                     KLLQIKKIWEKGKLSKIYLVCNYPTNWEKPLIVSKIQELKKLLPEDAKVRLDIKKEIR
                     KFLFSQEKLNFTEQEIDISTKDTDIVSIYNKLKEKMPKFLLFKADRTNTDKDNEITQI
                     TKAITQNAISEIEQKFNDMKKNILDDIKSFANATLERLKSFDKDIVKDLTPDITSKEL
                     SSLFSYEFKSDNGISFNKRGSGVKRLFLLSFFLEDAERKRQSNMIYAIEEPETSQHPN
                     YQKIVIESLQKLAQNQGRQILITTHTPEIARMVNKENIIFIQKDNKDKRIVYHGDEID
                     IEILVDALSIIVPNSKALSKGRELVKAMKEIVPRQLFEVAIQASIGNKIIARENVKSM
                     GKNVTAKCYGGDITRKRKLLEKQKEGKKRMKAIGKVHLPQEAFLSVLKID"
     gene            complement(10207..14019)
                     /locus_tag="R8X70_001204"
     CDS             complement(10207..14019)
                     /locus_tag="R8X70_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HEF2928985.1"
                     /translation="MKFEAIDEKEFLNPYYRKKPILEAELNEFIKALKDYKTSLENNL
                     KNNEDSLVANALSKFFENLHFECEIKSIHKGNSGIDLALKKDKQIQVIIEAKLPHSKE
                     FFSQSKPNCKALHECILYYLRERKALNSSLKHIIITDFYRFYIFKADLFEELFNKNKY
                     FKEAFENFESKNSLFKGNTDEFYKECEKLLSSEKYLDSITRKDLFDEPSLKGVFIDLK
                     PILEQEKPSFSKLKPVFKIFHKDFLLSEFNPNDANSLNNAFYKELLYILGLCESKQNS
                     KLIIAKSQESEEEQGTFYTAINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFN
                     DDKNLKFLNFKKIPDFDKLSELFFEVLAKEKSTRKKSEFAYLPYLNSSLFEKQSIENT
                     LEISSLSNDLKLFYYKNTVLKDDKCKAKKGQVGLLEYLFEFLDSFDFGSDDEQSEILS
                     QKELISSSVLGNVFEKLNGYKEGSFYTPSFITSYMCKESITKVVLDKFNTQFDLDAKD
                     ISELRKSLRKEDKKAQKELLNSIKICDPAVGSGHFLVSALNVMLSIYDELNLFDEEFY
                     LEVQNDEILITGRKGEFIEYKRPSTPKDKAHLIQQELFHTKKDIIENNLFGIDINPNS
                     CEITKLRLWIELLKHSFYQSFDDENYHDLKTLPNIDINIKCGNSLVSYFETGKSLSHY
                     PNIKERMSKYKRIVKDYKEGFYTDKNLIAKEIKNLQESFKNFCLKDKFNKEIKQLTNG
                     ANEYSKKYGDFLADEHHDEKFKSFFSKNMFEFSFDEKVAIKEFANLKKEYDNIFNLES
                     NHPFEWRFEFPEILDDDGNFKGFDLIIGNPPYIKEAENKELFTNTKKLRTYQGKMDIW
                     YHFVGRGFDILKNNGYLAFIATNNWVTNSGAKKLRNIVLEESQILSLVDFSSFMVFDS
                     ASIQTMIMSFQKTKPPKNYEFHFAKITTQTPIYEDALSLLKNEKTQNNEILKINLTPK
                     KFIDKTLNFTKSDYEELFNKIQKYGKFYLEEREVAQGIVPNPDIITKRNISDEMVSKG
                     IKVGDGVFVIEKDFLNVCEYEKKYLKPLYEVEHFGKYYFNKNNSKQLIYTTKNNSKKE
                     NIPTIIKHLQKFRSIMNNRRENLNKRLDFYHLHWARDERFFESGEKIVSVRKCIEPIF
                     SYLNNEAYVMLSLNVIKTQRINVKYLTAILNSKLVAFWLKHKGKMQGNNYQIDKEPLL
                     NIPIVDTNSKNKKLADELINLADEILKAKEQDKNANTQELENKINSLVYKLYNLTEDE
                     IKIIENKE"
     gene            14135..>14574
                     /locus_tag="R8X70_001205"
     CDS             14135..>14574
                     /locus_tag="R8X70_001205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928986.1"
                     /translation="MSSNIDILKYLLFVEYLTPQNIKKINNCCDTCETSYINQYIREK
                     IEKICNALTLNNKNLDDYSVEIIIQGAIYNNKTLFENIINKFNINKDLENFYDNLNTE
                     YASFVLKFNGRLNFTNENEIIKFNEFNSNNHQNFDPIIDNDFVF"
BASE COUNT         4430 a         2372 c         2295 g         5477 t
ORIGIN      
        1 tcagctagat cgcttttaaa ttcaacaaaa atctcttcat ttaatggttt tgacatttta
       61 acttcctttt taaaatttta atttcataag tttttaaagc aagaagtgtt ccaagttttg
      121 atactttgta gtttaagtta aatttttgta taatctaagc ttttaaaaat ttagctttgg
      181 agaagaaaat ttggaaaaca ttagaaatat agcagttata gctcacgttg accatggtaa
      241 aaccactatg gtagatgaat tgttaaaaca atcaggcacc tttagcgaaa gagaacaaat
      301 ttcagaacgc gttatggata gcaacgatat agaaaaagaa cgcggtatta ccatactttc
      361 aaaaaacaca gcgatcaatt acaaaggtac aaaaatcaac atcatagata ctccagggca
      421 tgctgatttt ggcggagaag tagaacgtgt tttaaaaatg attgatggag ttttgctttt
      481 agtagatgct caagaaggcg ttatgccaca aactaaattc gtggttaaaa aagccctatc
      541 tttaggacta aaacctatag ttgtaatcaa caaaatcgac aaaccagctg ctgatcctga
      601 aagagtaatc aacgaaattt tcgatctttt tgtagcttta gatgcaaacg atgagcaact
      661 tgactttgct atcgtttatg ctgcagcaaa aaatggttat gctaagcttg atctaaacga
      721 tgaaagcgac aatatggagc ccctttttaa aaccatactc gagcgcgttc cagctccaag
      781 cggtacaaat gaaaatcctt tgcaacttca agtctttact ttaggatatg ataacttcgt
      841 aggtaaaata ggaatcgcta gaattttcaa cggcgttgta aagaaaaatc aaagtgtaat
      901 gctcgcaaaa gccgatggta ctaaagtaaa tggtagaatt tcaaaactca tcggttttat
      961 gggcttagaa aaaatggata tagaagaagc aggcagtggc gatatcgttg cgatcgcagg
     1021 ttttgaagct ttagatgtgg gcgatagcgt tgtagatcca aacaatccta tgccacttga
     1081 tcctttacac atcgaagaac caaccttaag catagtattt tcagtaaatg atggtccctt
     1141 agcaggaact gaaggaaagc atgtgacttc aaacaaaatc gctgaacgct tagaagctga
     1201 aatgaaaacc aatatcgcga tgaaatacga aagcacaggc gaaggcaaat ttaaagtaag
     1261 tggtaggggc gaacttcaaa tcactatttt agctgaaaat atgcgtcgtg agggctttga
     1321 gttttgcatg ggaagacctg aagttatcgt aaaagttgaa gatggggtta agacagaacc
     1381 atttgaacat ttagttatcg atgtgcctga agaatttagt ggtgcagtga tagaaaagct
     1441 tggaaaaaga aaagctgaaa tgaaaactat ggcacctaca ggcgatggac aaacaagact
     1501 tgaatttgaa attcctgcac gcggacttat aggctttaga tctcaatttt taaccgatac
     1561 caaaggcgaa ggggtgatga atcatagctt tttagaattc cgtcctttta gcggtgcggt
     1621 tgaaaagcgt aataatggag cgttaatttc tatggaaaat ggcgtggctt tagggtattc
     1681 tttgtttaac cttcaagagc gtggagtact tttcatagaa cctcaaacca aagtatatac
     1741 agggatgatt ataggtgagc actctcgtcc aaatgattta gatgttaatc ctatcaaagg
     1801 aaagaatctt accaatgtaa gagcaagcgg aagcgatgat gcgatcaagc ttgtaccgcc
     1861 tagaaaatta agccttgaaa gagctttaga gtggatagaa gaagatgaac ttgtagaagt
     1921 tacacctcaa aatgtgcgtg ttcgcaaacg ctatcttgat ccaactcaaa gaaaaagaat
     1981 ggaaaaagca aaatcttaat ggacttaaaa agcttagaaa ataaaagact ttatatactc
     2041 aaacgcttag gaattttaaa attcttaagc gttgtagaag ctttacttgt gggcttttta
     2101 gcctttgttt ttataagaga tgccttaatc gcagtaattt tagctgtttt tgtaggtgtt
     2161 tttttctttc gttttacagc taaaaaacta aaactcgcac aaaaagaatt acaaattaat
     2221 gctttaaatt tatttttgcg tcgttttggg gcaaaaatta aaaagcaaag tttaagccaa
     2281 aaagactttt taaaattagg acttacaaag gatttgaaag aatttaaaag tcaaaactgc
     2341 tttgaattta aggattttaa aatttatgat attcagtttt tggatgaaaa taaacgcttt
     2401 ttttgcggaa ttttgctcga aattttaagt gcaaacaaaa atcctagctt tgaaaatgaa
     2461 gagcaaattt atatcaaact tcaagataaa aatttcactt taaatcatgt tttttctaaa
     2521 gaaaatcatt atcttatcgc cactctaaca aatccttttt tcatagactt aaaagaaagt
     2581 ctagagaaaa atttcaaaaa tttagaaaac aatctcaagc taatagaaga aaaaatcatc
     2641 aaaatttaat cctcatcttt agccaaattt tccaagcttt taagcccttc ttcgcctatc
     2701 aaattcccgc cttgcaagtc gctaaatata gcatttaaag aactcactat ggcagtagaa
     2761 ttaaagctta aattttctat ggctctttct ctttttttcc atatattttg caaggctctt
     2821 ttttctgctt ctagctcttc tttcatattt tgataagttt tgagtatgaa ggtgatttga
     2881 gtgttaaatt ccttagaatt gaggtattcg tataagatat gatttttctc atctttgttt
     2941 tgtaaagcat ttttgagctt gtaagcattg actatgtttt ctctaagcac cgccaaaacg
     3001 cctttaaatt cagcaaaagt gcagattaaa atcccctctt taaaatgtgt tttttgcttg
     3061 tctttaggca tggttttggt gattaaaacc gctatatcac ttttagcggc tatgctgtca
     3121 agcttaagct tgtcgatcca ttctttatta aactctttag tgcgtttgct ctcatacaaa
     3181 atactaccgc aaatattgcc aaagctgtct tttacgatat gtaaacaatc cgccccattt
     3241 actccctttg gcacttcttt tacttcatcg cttaaatact cactttgtat gtattcttct
     3301 atgagtagtt cggctgcttc gccttggagt tgctgtgagc cttgttctat cctgcgttgt
     3361 gcgtcttcta gcttttgagc tacactttta aaattcgttt ctagttcttt gtatttaaga
     3421 tcttgctctt gagtactttt ttgaaattca agacgcattt tttctctttc aaattccaaa
     3481 tttttgcttt cttgttcttt aaattcttta aaagcctctt ctttggcttg aaatttcaat
     3541 ctttcttcat tttctttttg ctctcttttt agtctttcat tttcagcctt tatgcttaaa
     3601 aactcgctaa gctctttgct ttttttctcg agttcttctt gcatgatttt catttcattt
     3661 tcatgctctt tgttaaattt ctcgctgaat tctttttgga aattttgctt ttgtgtgaga
     3721 agttcttgtt caaatttttg cttttctaaa agaagctttt ggcttacttg ctcgtttatg
     3781 agtttttctt gttctatctt ttgagttttt aaatcattta aagctttggt atattcagct
     3841 cttttagcat ttacctcatc atcaaattct tttttttgtt ttagcatttc ttgcttagct
     3901 ttatctaaaa tttgagcata taaagcagtg ctaatatcga taaaacttcc acaacttggg
     3961 catttgattt gttcattttg gtttaaattt tgcataaaat ttccttagaa tttttcccta
     4021 aatttaacat agaaaaacaa agattattct aagattgact tgttaaaatc attcttttag
     4081 aataattagg attacaaatg caaaaacaca ccaaaattca cggctttgct aaatttaaac
     4141 ttatcattat ccttgctttg atgtcaagca tagcaccgct ttctacagat atgtatttac
     4201 ccgcactttc tcatgtggag caaagttttc aaactaattc ttttttaacc caacttagta
     4261 tcgcaagttt ttttatcgct tttgctttag gacagcttat atatgggcct ttaagtgata
     4321 tttttgggcg taaaattcca gctttggtgg ggatattttt cttcatcgtt tcgagtttgt
     4381 tttgtgtgat tatcgatgat atttatgctt ttatcgcttt gagatttttt gaagcacttg
     4441 ggggttgtgc aggtgtggtt atcgcaaggg ctattgtcaa tgacttgttt gagatcaaag
     4501 aagctgcagg gatttttgct ttgatgatgg tttttagttc tcttgctcct atgctttcgc
     4561 caacttttgg gggaattttg ctagagtatt tttcatggca tagtattttt gtgactttgt
     4621 ttgctttggg aattttactt tttttgatga tactttttgg tttaaaagag tccgcacctc
     4681 atcttaaaaa caaaaaattt tcccatcatg aagcgatgaa aagctacaaa tttgttttaa
     4741 gcgataaacg ctttttagtt tatatactat gtgcttcttt tgctttggcg gcgatgtttg
     4801 cttatatcac aggatcaagc tttgttttta cgcagttttt tggcttaagt gagcaaaaat
     4861 ttgctttgct ttttggagca aatgctttag gttttgtcat ctgtgcaaat ataaatgcga
     4921 gattggtttt aaaatacgaa agcgaaaaaa ttttggcaaa agctttgatg ataatgttta
     4981 tatcgactgt gattttactt gtaaatgcct tttttcaccc aaatttcttg ctttttgaac
     5041 ttagtatttt tacaagtatc gctatgcttg gtttcatcgc acccaatacc acgactttgg
     5101 ctatggcaag gtttaaagaa catagcggaa ctgcttctgc ggtgcttgga acggtgcaat
     5161 ttggttttgc aggctttatc tccttcgtgg ttggggctat taacgcaaat acgccgataa
     5221 tccttgcttt tgtaatgtgt gcttgcgtat tggttgcaaa tatgatatat tttctaatca
     5281 aaataaagga gaaaaaatga aaacaaataa tatctttatg gctttagcca tagttttggc
     5341 aagtttgatt ctagcttttg gatttaacaa ggctttaagt gattttaaaa cacttgaaag
     5401 aagtgtaagc gtaaagggtt taagtcaaaa agaagtcgaa gcggatactt tgatacttcc
     5461 tataaaattc acaagatcaa ataacaatct tacaaattta tacgaagaac tagagcaaga
     5521 taaagaaaat atcatcaaat ttttaaaaga acaaggcgta aaagaggatg agatcagcta
     5581 caactcacca aacatcatag atcgtttaag cgatccttat agcaacgaca ctcaagctgc
     5641 ataccgatac ataggcactg cgaatttact catctatact caaaatgtaa agcttggaaa
     5701 aagtatacta gaaaacattt caagtcttgc aaaatttggt atagtaacaa aaatcgatga
     5761 ttatgatata gaataccttt acaccaagct aaatgatata aaaccacaaa tgatagaaga
     5821 agcaacgctc aatgctagaa acgcagcaat aaaattcgca caagattcaa acagccatct
     5881 aggcaagata aaaaaggctt ctcaaggaca atttagcatc agcaacagag ataaaaacac
     5941 cccttatatc aaaaccataa gagtggtttc tactatagaa tactacttaa aagactgatg
     6001 atgaaatttc aagctaagct ttaaggctta gcttggtact atggaatttt ttcgtgcagt
     6061 tttttggagt gagaaaatac aaagcaaaag gataatgcca tataaaatac tagtggattt
     6121 tatggtgttt tctataatct tgtcttgatt tatagtcttt aaatgtctac atatttttct
     6181 cctaaaactt ccttggttat atttgaattt acatcgtttt aattttaagt ttatttttaa
     6241 tgcctaaatt tatcaactgg gctaaaaaaa atgcttccca gcctatttac gaacacgctc
     6301 cgcaaaatca tcaaattaaa tctcacactc caactatggg aggggttatt tttgtatttt
     6361 gtgcgatttt tgctagtttg ctttgcatta aatttgataa tttatttgca cttatgggac
     6421 ttttatgctt gattagcttt tgctttatcg gcgtaattga tgatttaggt aaaattctta
     6481 aaaaaaataa tcattcaggt ttaagcccta aggctaaaat gtttggctta attttcgctt
     6541 catttttgtg cctagctcct ttatatttta gcggaatttt gagtgctgat ttttacatac
     6601 ctttttacaa atatcccctt tttaatatgt atatttttgc tcttttcttt tggattttag
     6661 tgctaatctc aagctcaaat gctgtcaatt taacagacgg cttagacgga cttgcgaccg
     6721 tgccttctat tttttcctta gcgactttgg gcgtgttttt gtatttaagc gggaatttaa
     6781 tttatagtga atatctcttt ctaccgaaaa tcaatggctt aggtgagtta gtcgtcattt
     6841 gtgccgcttt aatctgtgct ttaatgggct ttttatggtt taactgctat cctgctcaaa
     6901 tttttatggg agatagtggc agtctcgcac ttggtggctt tataggcttt ttaaccgtag
     6961 taagtaaaaa tgaaattcta cttttgctcg taggttttgt ttttgtttta gaaaccattt
     7021 ctgtcatttt gcaggtggga agctttaaaa tttggggaaa aagggtattt aaaatggcac
     7081 ccattcatca tcattttgaa aaagtcggct gggtagaaaa taaaatcatc gttcgttttt
     7141 ggatgatagc tctactttct aatctcctcg ctttagcctc ccttaagttg agataagtga
     7201 gtaaattcgt aaagtttcat tgtaaatttc gttagattta aaacaaaatt tcatcatttt
     7261 aatgttatac ttctcactta aaacgactta ttaaggagaa cttgtaatgt caaattctac
     7321 aaaaaccttt atcattgtag ctgatattat tttattcatc gcactgcttg ctttgttacc
     7381 ttttgaaaca aaagttaatc aaggcttggc tattttagcg tttatcgcag tcttgtggct
     7441 tagtgaggcc ttgcatgtta ccatcactgc gattttaatt cccattttag ctgttattat
     7501 gggcttgatg ccgactaaat ccgctctaca cggctttgcc gacccaaata tctttctctt
     7561 ttttggcggc tttgccttag ctgccgctat gcactttcaa gagcttgata aaatcatcgc
     7621 tcaaaggata ctcatgctag ctagaggtaa ttttgctctc gcggcacttt acatcttttt
     7681 tacaactgca tttttatcaa tgtggatgtc aaatactgcc acagctgcaa tgatgctccc
     7741 ccttgctata ggtatgcttt cacaacttga ctacgaagaa aataaaaata cttatgtttt
     7801 tgtgctttta ggtatagcct ttagtgctag tataggcggt atagggaccc tagtaggaac
     7861 acctccaaat gccatagtcg cgacaaattt aaatatcact tttgcacaat ggcttcaata
     7921 tggaattcct atcgttatca tttttatgcc attaatgata cttgttcttt atgtaacctt
     7981 taagccgaat ttaaaatttc aaatcaacac tgacctagag caaaaaattc ctatggatac
     8041 tcaaaaatat atcaccctaa tcatctttgc cattgtggct atgtgttgga tttttagttc
     8101 ttatattaat ccttttgttt caaatttgtt aggatttgag aaaaaaatcg ccaattttga
     8161 cagcgttatc gctatattgg ctgctgtttt agtctgtgct tttagagtag taagctggaa
     8221 aaaagtgcaa gaaaataccg actggggagt tttaatgctc tttggtggtg gaattacact
     8281 aagccttgtt ttaaaagata gtggagcaag caaaattatg gctgatggca tcatcagttt
     8341 aatcgctgga ggacatttat ttttaattgg gcttttagtt tctttattta ttgtattttt
     8401 aacagaattt acctcaaata ccgcttctgc cgctctttta gtgccacttt tcatctctat
     8461 ggcagagtcc ttaggagcgc cacctcttgg tttagcactc atcataggca taggagcaag
     8521 ctgtgctttt atgttgcctg tcgcaactcc gccaaacgct atagtctttg gcacgggcta
     8581 cattaagcag tctcaaatgg tgcgtgtagg aatttacctt aatgttcttt gttctatcat
     8641 cattgcttta atggcatatt tcttttggct ttaagcatct tgtctttaca agatgcttac
     8701 cttaatcgat tttaagcaca cttaaaaagg cttcttgcgg taaatgcacc ttacctatgg
     8761 ctttcatacg ctttttgcct tctttttgct tttctaaaag ctttctttta cgcgttatat
     8821 ccccgccata acatttagcc gttacatttt tgcccataga tttgacattt tcacgcgcta
     8881 tgattttatt gcctatacta gcttgaatcg ccacttcaaa aagctgtctt ggcactatct
     8941 ccttcatcgc tttgacaagt tccctaccct tacttaaagc cttagaattt ggcacaataa
     9001 tgcttaaagc atcgacaaga atctctatat caatttcatc tccatgataa actattcgtt
     9061 tatctttgtt atctttttgt ataaaaataa tattttcctt attaaccatt cttgcaatct
     9121 caggagtatg tgttgtaatt aatatttgac gtccttggtt ttgtgctaat ttctgcaaag
     9181 attctataac tattttttga tagtttggat gttgtgatgt ttccggttct tcaattgcat
     9241 aaatcatatt agattgtcgt tttctttcag catcttctaa aaagaaactt aataaaaaca
     9301 accttttaac tccactacct cttttattaa atgatattcc attatcgctt ttaaattcat
     9361 aactaaataa tgagctcaac tcctttgaag taatatctgg ggttaagtct tttacaatat
     9421 ctttatcaaa actttttaat cgctcaagtg tcgcattagc aaaactctta atatcatcta
     9481 aaatattttt tttcatatca ttaaattttt gctcaatttc agagatagca ttttgtgtaa
     9541 tggcttttgt tatttgagta atttcattat ctttatctgt atttgttcta tcagctttaa
     9601 ataataagaa tttaggcatt ttttccttta atttgttgta tatgctaaca atatcagtat
     9661 cttttgtgga tatatctatt tcttgttctg taaaatttaa tttttcttgc gaaaataaaa
     9721 atttccttat ttctttttta atatctagtc taactttagc atcttcagga agcaattttt
     9781 ttaattcttg aatttttgat acaataagtg gtttttccca attagttgga tagttacaaa
     9841 cgagataaat tttacttaac tttccttttt cccatatttt tttgatttgt agcaatttct
     9901 cttgatttaa taaatactca ctctctaaag atgtttgtgt tctttcgctt tcactagcat
     9961 caatattaat ctgcatttct gattcaacct gaaagaaaca agtaatacta aatttattct
    10021 cgcttgaatt aatattaaca tcatcttcta aagccttatt attttcaaaa aatatatcca
    10081 acgcatcaaa taatgtcgat tttcctacat cgttttttcc aataattaca cctaaatctg
    10141 aaaaattaaa ttctgtattt tcataacttc taaaattttc aatcttgcat tttactaatt
    10201 tcattttcac tccttgtttt ctatgatttt tatctcatct tcggtgagat tataaagttt
    10261 ataaaccaaa gaattgattt tattttctag ttcttgggta tttgcgtttt tgtcttgttc
    10321 tttggctttt aaaatttcat cggctaaatt tataagctca tcagctaatt ttttattttt
    10381 agaatttgta tccactatgg gaatatttaa caaaggctct ttgtcgattt gataattatt
    10441 gccttgcatt tttcctttat gctttagcca aaatgcgaca agctttgaat ttaaaatagc
    10501 agttaaatat ttaacattaa ttctttgagt tttaataaca tttagactta acattacata
    10561 ggcttcattg tttaaatatg aaaagattgg ctctatacat tttcttacac ttactatttt
    10621 ttctccactt tcaaaaaacc tctcatctct tgcccaatgc aaatgataaa aatctaatct
    10681 tttatttaaa ttttctcttc tattattcat aatagatcta aatttttgaa gatgtttgat
    10741 tatagtagga atattttctt ttttgctatt attttttgtg gtatatatta attgttttga
    10801 gttatttttg ttaaaataat attttccaaa atgctcaacc tcgtacaaag gttttaaata
    10861 tttcttttca tactcacaaa catttaaaaa gtccttttct atcacaaaaa caccatcacc
    10921 tactttaatc cctttagata ccatttcatc gctaatattt ctttttgtaa ttatatctgg
    10981 attaggtact atcccttgtg cgacttccct ttcttcaaga taaaatttcc catatttttg
    11041 aattttattg aaaagttctt cataatcact ttttgtaaaa tttaaagttt tatctatgaa
    11101 tttttttgga gttaaattta tctttagaat ttcattattt tgggtttttt cattttttaa
    11161 aagacttaga gcatcttcat aaattggagt ttgggttgtg attttagcaa aatgaaattc
    11221 ataattttta ggcggttttg ttttttgaaa actcataatc atcgtttgta tacttgcaga
    11281 atcaaacacc ataaaagaac taaaatcaac aaggcttaaa atttgggatt cttctaaaac
    11341 tatattgcgt agttttttag ctcctgaatt tgtaacccaa ttatttgtag cgataaatgc
    11401 taaatatcca ttattcttaa gtatatcaaa tccacgccct acaaaatgat accaaatatc
    11461 catttttcct tgataagttc ttaacttttt tgtattggta aaaagttctt tattttcagc
    11521 ttcttttata taaggtggat tgccaataat tagatcaaag cctttgaaat ttccatcatc
    11581 gtccaaaatt tcagggaatt caaaacgcca ttcaaaagga tgattgcttt ctaggttaaa
    11641 gatattgtcg tattcttttt taagatttgc aaattctttt atggctactt tttcatcaaa
    11701 actgaattca aacatatttt tagaaaaaaa gcttttaaat ttttcatcgt gatgttcatc
    11761 ggctaaaaaa tcgccgtatt ttttagaata ctcgtttgcc ccatttgtga gctgtttgat
    11821 ctctttgtta aatttatctt tcaaacaaaa atttttaaag ctttcttgga gattttttat
    11881 ttccttggca atgagatttt tatctgtgta aaagccttct ttatagtctt ttactatgcg
    11941 tttgtatttg ctcatacgtt ctttgatgtt agggtagtgg cttagacttt tgcctgtttc
    12001 aaagtaagat accaaagaat ttccgcattt tatgtttata tcgatgtttg gcagggtttt
    12061 aagatcgtga taattctcat catcaaagct ttgataaaaa ctatgtttta aaagctctat
    12121 ccaaagcctt agcttggtga tctcgcatga gttagggttg atatcgattc caaaaaggtt
    12181 attttctatg atgtcttttt tagtgtgaaa aagttcttgc tggataagat gggctttatc
    12241 tttaggcgta cttgggcgtt tatactctat aaactcgcct tttctacccg tgatgagaat
    12301 ttcatcgttt tgcacttcta ggtaaaattc ttcatcaaaa agatttagct catcataaat
    12361 gcttaacata acatttaaag cagaaaccaa aaaatgccca cttcccaccg caggatcgca
    12421 aatttttata gagtttaaaa gctctttttg tgctttttta tcttcttttc ttaaagactt
    12481 tcttagttcg cttatatctt tagcatcaag atcaaattgg gtgttgaatt tatcaagcac
    12541 aacttttgtg atgctttctt tacacatata agaagtgata aagcttggcg tgtaaaaact
    12601 tccttctttg tagccattga gtttttcaaa tacatttcct aaaacgcttg agcttatgag
    12661 ttctttttgg cttaaaattt cgctttgctc atcatcacta ccaaaatcaa agctatccaa
    12721 aaattcaaac aagtattcta aaagccccac ttgtcctttt ttagccttgc atttatcatc
    12781 ttttagcaca gtgtttttat agtaaaaaag ctttaagtca ttgcttaagc ttgaaatttc
    12841 aagtgtgttt tctatgcttt gtttttcaaa caaagaagaa tttaaataag gcagataagc
    12901 aaattcgctt ttctttcgcg tgcttttttc tttggctaaa acttcaaaga aaagttcgct
    12961 aagcttgtca aaatcaggga tttttttgaa atttaaaaat ttcaaatttt tatcatcatt
    13021 aaaacgcacc aaattcgact ctataagctt taaaaacaag atacgattaa gccataaaat
    13081 caaaagtttt aaaatggttt caaaattttc ttctttgagc ttagagttta tagcggtgta
    13141 gaaggtgcct tgctcttctt cgctctcttg gctttttgcg atgatgagct ttgagttttg
    13201 cttgctttcg caaagcccta agatatataa aagctctttg taaaaggcgt tattgagcga
    13261 atttgcatcg ttggggttaa actcgcttag taaaaagtct ttgtgaaaaa ttttaaacac
    13321 aggcttgagc ttactaaagc ttggcttttc ttgctctaaa ataggcttta agtcgataaa
    13381 aacacccttt aagctaggct catcaaacaa atcctttctt gtgatagaat caaggtattt
    13441 ttcactgctt aaaagctttt cacactcttt gtaaaattca tcggtattgc ccttgaaaag
    13501 agaatttttg ctttcaaaat tttcaaaagc ttctttaaaa tacttgtttt tgttaaaaag
    13561 ctcttcaaac aaatccgcct taaagatata aaaacgataa aaatccgtga tgatgatgtg
    13621 cttgagtgat gaatttaaag cctttctttc acgaagataa tacaaaatgc actcgtgcaa
    13681 agccttgcag ttgggcttgc tttgactaaa gaattcttta gaatggggca attttgcttc
    13741 aatgatgact tgaatttgct tgtctttttt caaagcaaga tctataccgc tgttgccttt
    13801 atgtatgctt tttatctcac actcaaaatg caaattttca aaaaatttgc ttaaagcgtt
    13861 tgctactagg gagtcttcgt tgtttttgag attgttttct aagcttgttt tataatcttt
    13921 caaagcttta ataaattcgt ttaactctgc ttctaaaatc ggctttttgc ggtagtaagg
    13981 atttaaaaat tctttttcat ctatggcttc aaatttcatc ttgcaccttt tttttaaaat
    14041 agtttctatt ttatcaaaat tttactttaa gaaaatggaa atttgtaaaa acatgttaag
    14101 atatagttta tatattttta tttaaggatt taacttgagt agcaatattg atattttaaa
    14161 atatttactt tttgtggaat atttaacacc tcaaaatatc aaaaagataa acaattgttg
    14221 cgatacatgc gaaacttcat atattaacca atatattcga gaaaagattg aaaaaatttg
    14281 caatgcctta accttaaata acaaaaattt agatgattat agtgtagaaa ttatcataca
    14341 aggtgccatc tataacaata aaaccttatt tgaaaatatt ataaataaat ttaatattaa
    14401 taaagacttg gaaaattttt acgataattt aaatacagaa tatgcatctt ttgttctaaa
    14461 atttaatggt cgtttaaatt ttacaaatga aaatgaaatt ataaaattca atgaatttaa
    14521 ctcaaacaat catcaaaatt tcgatccaat aatagataat gattttgttt ttaa
//
LOCUS       DAQUWA010000044        14495 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.044, whole genome shotgun sequence.
ACCESSION   DAQUWA010000044 DAQUWA010000000
VERSION     DAQUWA010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14495
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.044"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(16..1266)
                     /locus_tag="R8X70_001206"
     CDS             complement(16..1266)
                     /locus_tag="R8X70_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEF2928987.1"
                     /translation="MIVSKTYEIDSCDDVELDIKRESKLEFKLWYDDEKEIKALVFII
                     PGLGGDVDENYREHLAEFVAGEFNVAVASVNYHCIGNRPQTGSSFFMDDIDKLILKTS
                     CEALNIQVNLDKLNSLEELSSTLKEVDHILEEQKNQKLINPNFKLSIHLSLQPTKNEY
                     QNFGIMQAQDLLNVALYLKKHAPFDTMGGGMPVIMIGSSHGGYLAHLAAKFAPWLING
                     VIDNSSYAKFLWRLIGFGKEIDFTKYYCFGTGIFFKHIHIYCSDKTFWTSNSSSNNFF
                     SIPRRMIRYILEPKHLEIQANYPKPCYTSYHSFYDKEIAPPDEKLELYKYLKQFDFDA
                     ELHMIKNPDQIDGKFIKSLDHGMGMSIKTLISKELPCMLEKVLSESDSKKEWKNKSIS
                     YPCDGLVYRFSEKNNKINLDITET"
     gene            complement(1266..1781)
                     /locus_tag="R8X70_001207"
     CDS             complement(1266..1781)
                     /locus_tag="R8X70_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEF2928988.1"
                     /translation="MKRAFTILELVFVIVILGILAAIALPKFSSSRDEAEVSKSLNNL
                     KTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSNFNGIKEVNFRVGDEKECLKLVF
                     INKADFILMGISSNEASKNAIINIANNPKQEFQNLDFTSNSKNKACVALSKNENFKNL
                     ASKTYLLIGGM"
     gene            complement(1785..2792)
                     /gene="tsaD"
                     /locus_tag="R8X70_001208"
     CDS             complement(1785..2792)
                     /gene="tsaD"
                     /locus_tag="R8X70_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEF2928989.1"
                     /translation="MKNLILAIESSCDDSSIAVIDKDTLECKFHKKISQEMEHNVYGG
                     VVPELAARLHSEALPKILEQCKGYFDKLCAIAVTNEPGLSVSLLSGISMAKTLALSLN
                     LPLMAINHLKGHIYSLFLEEPICLDMGILLVSGGHTKVLYLKEDGKIEILARTNDDSF
                     GESFDKVAKMMNLGYPGGVLIENLAQKAKSKNIHFNIPLKHSKELAYSFSGLKNAVRL
                     EILKHENLDEDIKAEIAYGFENAACEHIMDKLEKIFNLYKFKTFGVVGGASANLNLRS
                     RLQNLCEKYQSKLKLAPLKYCSDNALMIARAGVDTYKRKEFVELEEEILSPKNKNFLR
                     M"
     gene            complement(2789..4183)
                     /locus_tag="R8X70_001209"
     CDS             complement(2789..4183)
                     /locus_tag="R8X70_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HEF2928990.1"
                     /translation="MKFFISIIFFISGLFALDLEFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGKNGDLNRKFASISPKDPD
                     YQTVKRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK
                     YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDAEMLKALTYFVISNHKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFTRTFELTPQGVDKAINQELEVKLFDDK
                     ILLSLKNPRQVINYVPFPVNKELNYNTSNELTAVIAENNSFYIQYGNRFQTRLYPEYL
                     EFSNPFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESNILV
                     SKKNMQKPYSLDMAGKIYRVEFYELRGANLQQFLENSVESKLIKNAKMLDLATLRTAR
                     AKDKFIGSILVEFE"
     gene            complement(4180..5256)
                     /locus_tag="R8X70_001210"
     CDS             complement(4180..5256)
                     /locus_tag="R8X70_001210"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEF2928991.1"
                     /translation="MIVFGSTGSIGLNALKLATLKNIKISALACGENISLLNEQIEQF
                     KPQFVAIKNSKDKHLVKHDKVFVGQEGLEEILSLCEDDLLLNAIVGFAGLKSTLKAKE
                     LGKKIALANKESLVVAGKFLKGAKFLPVDSEHSALKFLLEGKKDIAKLYVTASGGAFY
                     KHKIKDLSHVSVKDALKHPNWNMGSKITIDSATMANKLFEIIEAYHLYNFKNIDALIE
                     PKSLVHAMCEFKNGASTAYFSRADMKLSISEAIFSKHDSKILEPVDFVKLSGLKFYKI
                     STKKYPIFKLKDELLNNPDLGVIINAANEIGVQNFLDHKIQFLDIAHIVFKALDHFGV
                     PKISSIDEVFEYDYKTREHLRGMK"
     gene            complement(5253..5978)
                     /locus_tag="R8X70_001211"
     CDS             complement(5253..5978)
                     /locus_tag="R8X70_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEF2928992.1"
                     /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGILALLLVVGYLVYKKASLKPALIYIYP
                     SLPVLALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVI
                     GGLVCASVIGTILGIFVYSFWLSLLCSFFVAIFAVIGDLLESYFKREAGVKDSGDLIP
                     GHGGVLDRIDAVIIATFVMVALL"
     gene            complement(5987..6325)
                     /locus_tag="R8X70_001212"
     CDS             complement(5987..6325)
                     /locus_tag="R8X70_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2928993.1"
                     /translation="MPVSPIGNMNFVNQNMAYPATQASNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDDEKNEEDESKDPNFKDA
                     QSIHRLDISI"
     gene            complement(6327..7634)
                     /locus_tag="R8X70_001213"
     CDS             complement(6327..7634)
                     /locus_tag="R8X70_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HEF2928994.1"
                     /translation="MKYTELMQLQNFFSQFKKIDFIKRVNDNILELSFNRERFIFDLT
                     RGMSAIYTAKLMSKNYNAPFDFMLKKYFNNAFIKEVKLLQDNRILCFSVKVDKAYKSY
                     ESKIYFEFTGKNTNVIITDEKDLIIEALRHIDKSYRVVKPNVILEALKPYKMDEKFEE
                     IKNFKDYFTQKFEILHANKIKQIQTLKLAQIDKKIENLKELYLALDKEEVLLDQALNL
                     RKQADILFANLSILKEYEREFELDDFEGKKVKFKLDLSPKESANLFYKNAKKLEQKAR
                     NLNLQRENLKEKLDFAYGLKEMLSKAKNEFELEILLPKKSTKKNQENKQDNGIANFYF
                     NEFKICVGKNEKGNENLLKSAKKDDLWLHVRDIPSSHVLIISNKQKISEEVIEFSARL
                     CVNFSGLKKGSYWVDYTLKNFVKVQQKAFVKYTNFKSINITKD"
     gene            7697..8272
                     /locus_tag="R8X70_001214"
     CDS             7697..8272
                     /locus_tag="R8X70_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEF2928995.1"
                     /translation="MKLENLNCVILCGGKSSRMGEDKSKLIFKNQTLTQFQVEKFSKI
                     FKNVYVSAKEDKFGAKFKLIKDCPEFEIYSPMLALYSILSNFKDEFVFILSVDSPNLS
                     DKELLKFLPSLKQDYQIIIAKTPSHKHPLCGFYHSSVAHFCKELLEKNEQKIALLFSK
                     AKTHFVDFEDESPFLNLNFYQEYEQFKSEYE"
     gene            8269..9264
                     /locus_tag="R8X70_001215"
     CDS             8269..9264
                     /locus_tag="R8X70_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEF2928996.1"
                     /translation="MKKILFLIFFYSLVFCDDFEQALEFEKKGQYEKAMQIYKKLALQ
                     NSPKQDLKENNASLLSSIKHETQNTQKTPSTKEDFSRIALANYLGENSSFNPLGISSY
                     KMNYFLPFAYSFGSLGGENRKTEMKFQLSIKKRLFEDLLGLGEKYYVGYTQTSWWQNY
                     KHSSPFRETNYQPEFFVDIPLHFEDYKFLNNLRVGILHESNGKGDENLESRSWNRIYA
                     SSVFLYQRFLFIPRIWYRIPENSEDDDNPEITHYMGNFDINMGYLGNDYFINLMLRNN
                     LDFHDNKGAVQVDIGYDIFDNGIYWYLQYFNGYGESLIDYNKRLQRLSTGFLISY"
     gene            9397..10365
                     /locus_tag="R8X70_001216"
     CDS             9397..10365
                     /locus_tag="R8X70_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2928997.1"
                     /translation="MLFKHLFSLNILLILLVVFGIISLFIGVIRINLDDIFSLSTTQL
                     EIILLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIF
                     FTGASFFTQALIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIINAITTFFT
                     YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIAGMGEDLALNL
                     GVSYNTILFLGLIIVSIITSVVIVSIGVIPFLGLIIPNLVAIYRGDNLKKNLIYIALC
                     GALFLLICDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKTYA"
     gene            10358..11296
                     /locus_tag="R8X70_001217"
     CDS             10358..11296
                     /locus_tag="R8X70_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEF2928998.1"
                     /translation="MRKKILILAFLTLIMALVFVFAGLKDFDEYALKNRFLQIAAIVI
                     VAICIAISTVIFQTLCNNKILTPAIIGLDSLYMLLQSALVFSLGSANLSVYRNDINFL
                     ITLACMVVFSLGLYKILFSSDKSIYLIMLLGLIFGTLFSTLSSFFEILIDPDEFMIIQ
                     GRMFASFDNVAFDVLALAYIVTLLSFIWIFRYMKFLDPLSLGKDLSINLGINYQKISK
                     HLMIIIAILTSISTALVGPITFLGLLVVNITYELFKTAKHSILLLACILISILALLGG
                     VFFVSRIFDYNTTISVIINFLGGIYFIYLVLKGNKL"
     gene            11293..12048
                     /locus_tag="R8X70_001218"
     CDS             11293..12048
                     /locus_tag="R8X70_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEF2928999.1"
                     /translation="MIRLQNITKCYDQKAIISDLSIDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPDSGRIYIDGMNLTLYKEQDLAQKISILKQQNHINLRLKVEELVAFGRFP
                     HSQGRINLNDKMKIDEALEYMGLNTLRNEFLDSLSGGQKQRAFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKNGKLLKQG
                     LKDEIIQEDVLRQIYDMDIPVSQIDGKKICIYF"
     gene            12063..13052
                     /locus_tag="R8X70_001219"
     CDS             12063..13052
                     /locus_tag="R8X70_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEF2929000.1"
                     /translation="MKKSLVFAFFAFFLSLILTACDSKSNENNASTAIKTSTTVKVIP
                     ISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFHALRLNDKVAGVPAKNLPK
                     YLQQFKDKPSIGGVQQVDFEAINALKPDLIIISGRQSKFYEKLKEIAPTMFVGLDNAN
                     FLSSFENNVLSVAKLYGLEKEASEKIADIKNEIEQAKSIVDEDKKALIVLTNSNKISA
                     FGPQSRFGIIHDVLEINAVDENVKVGTHGKSINSEFILEKNPDYLFVVDRNIIVGNKE
                     RAQGILDNALVTKTNAATNNKIIYLDPEYWYLASGNGLESLKTMILEVTNAIK"
     gene            13218..13850
                     /locus_tag="R8X70_001220"
     CDS             13218..13850
                     /locus_tag="R8X70_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929001.1"
                     /translation="MINKNKLFRQIHIYVSLFFLPCAVLFALTGIAYILGADQDTGLK
                     VETYKLVKNIEPGKEKDALIQYLQENNLKVPSDAEATQGKGKGANMGGMHHNANAAPA
                     NVKAGKGKNNELTIGGAHYSANITPVAQNEYVITLKTRSLLGDMIMLHKDKGAWYFSV
                     LSIGFGIALFLLYISGLIITLFASKKDRQKQLATLGAGVVITILLAYLSL"
     gene            13918..14008
                     /locus_tag="R8X70_001221"
     tRNA            13918..14008
                     /locus_tag="R8X70_001221"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13952..13954,aa:Ser,seq:gct)
     gene            14320..>14495
                     /locus_tag="R8X70_001222"
     CDS             14320..>14495
                     /locus_tag="R8X70_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein Rad50"
                     /protein_id="HEF2929002.1"
                     /translation="MSDTIILDILLEKYNNAKYKKVGNCIKLHYQYHDVNVNLYFDGY
                     DKNYPSTSIILAMD"
BASE COUNT         4860 a         2376 c         2038 g         5221 t
ORIGIN      
        1 gctcattggg tttccttaag tctctgtgat atctaaattg attttattgt ttttttcact
       61 aaaacgatac accaagccat cacaagggta gcttatgctt ttgtttttcc attctttttt
      121 agaatcagat tcagataaaa ctttttcaag catacaagga agttctttgg aaatcaaagt
      181 ttttatagac attcccatac catgatctaa acttttgata aatttaccat caatttgatc
      241 tggatttttt atcatatgaa gctcggcatc aaaatcaaat tgttttaaat atttataaag
      301 ttctaatttc tcatcaggtg gagctatttc cttatcataa aaagaatgat aacttgtata
      361 gcatggtttt ggataatttg cttgaatttc aagatgcttt ggttctaaga tatatcttat
      421 cattctcctt ggtattgaaa aaaaattatt tgagctcgaa ttgctcgtcc aaaaagtttt
      481 atctgaacaa taaatatgga tatgtttaaa aaagataccc gttccaaaac aatagtattt
      541 tgtaaaatca atttccttgc caaaacctat aagacgccaa agaaacttag cataactaga
      601 attatctatc actccattta taagccaagg tgcaaattta gctgctaaat gagccaaata
      661 tcctccatga gaactaccta tcatgataac gggcataccc ccccccatag tatcaaaagg
      721 agcatgtttt ttaagataaa gtgcgacatt taaaagatct tgagcttgca tgatcccaaa
      781 attttgatat tcgttttttg ttggttgcaa acttagatga atgcttaatt taaaatttgg
      841 attaattaat ttttggtttt tttgttcttc taagatgtga tcaacttctt tgagtgttga
      901 gcttaattct tctaaagaat ttaacttatc taaattaact tgtatattta aagcttcaca
      961 acttgttttt aaaataagtt tgtctatatc atccataaaa aagcttgatc cagtttgcgg
     1021 gcgattacct atacaatgat aattcacact tgctacagcc acattaaatt cgcctgctac
     1081 aaattcagct aagtgttcac ggtaattttc atccacatct ccaccaagcc cagggatgat
     1141 aaacactaaa gcttttattt ctttttcatc atcataccaa agcttaaatt caagctttga
     1201 ttctcttttt atatcaagtt ctacatcatc acaagagtca atctcataag ttttactcac
     1261 tatcattaca ttccccctat taaaagataa gttttactgg ctaaattttt aaaattctca
     1321 tttttactta gtgccacgca agctttattt tttgaattgc ttgtaaaatc taagttttga
     1381 aattcttgtt tggggttatt ggctatatta attatggcat ttttgcttgc ttcattgctt
     1441 gaaattccca tgagtataaa atcagcttta tttataaaaa caagttttaa gcattctttc
     1501 tcatcgccta cgcgaaaatt tacttctttt ataccgttaa aattactaag atcaacattt
     1561 tcaaccccgc ttacattact catcgttttt atagagctta aatgatcatt ttttaaagta
     1621 taaatgctta tatcattgat taaagtttta agattgttta aggatttact cacttcagct
     1681 tcatctctac tagaactgaa ttttggcaaa gcaatcgctg ctaaaattcc taaaatcacg
     1741 ataacaaaaa caagttctaa tatggtaaaa gctcttttca ctttttacat ccttaaaaaa
     1801 tttttatttt ttgggcttaa gatctcctct tcaagctcca caaattcttt tcttttataa
     1861 gtatcaaccc cagctcttgc tatcatcaaa gcattatcag agcagtattt taaaggggct
     1921 agttttaatt tactttgata tttttcacat aaattttgca aacgagaacg caaatttaaa
     1981 ttcgcacttg ctcctcccac aacaccaaag gttttaaatt tataaagatt aaaaatcttt
     2041 tctaatttat ccatgatatg ctcacatgct gcattttcaa atccataagc aatttctgct
     2101 tttatatctt catctaaatt ttcatgcttt aaaatttcta aacgcaccgc atttttaagc
     2161 cctgaaaaac tataagcaag ctctttagag tgttttaaag ggatgttaaa atggatattt
     2221 tttgatttag ctttttgggc taaattttct ataagcactc caccaggata gcccaaattc
     2281 atcatcttag ctaccttatc aaagctttcg ccaaagctat catcattggt ccttgctaaa
     2341 atttctattt ttccatcttc cttaagataa agaaccttag tatgcccacc acttacgagc
     2401 aaaattccca tatcaaggca aataggctcc tctaaaaaaa gactataaat atgaccttta
     2461 agatgattga tagccattaa gggcaaattt aggctaagtg ctaaagtctt tgccatgctt
     2521 atgccactaa gcaaagaaac actaagtcca ggttcatttg tcacagctat ggcacataac
     2581 ttatcaaaat accccttgca ttgctcaagt atctttggca aagcctcgct atgaagtctt
     2641 gctgcaagct caggtaccac tccgccataa acattgtgct ccatttcttg agagattttt
     2701 ttatgaaatt tacactctaa agtatcttta tcaatcactg ctatagagct atcatcacaa
     2761 gaactttcta tagctaaaat aagatttttc attcaaattc cactaaaata gaaccgataa
     2821 atttatcttt agctcttgca gttcttagcg tagcaagatc aagcatttta gcatttttga
     2881 taagcttgct ttcgacacta ttttctaaga attgctgcaa attagcccct cttaactcat
     2941 aaaattctac gcgataaatt tttcctgcca tatctaaaga ataaggcttt tgcatatttt
     3001 ttttagaaac taaaatattg ctttcatcct tgctatgatc aaaacctatg atatttacgc
     3061 gcacattagc tatctttgga ataagaaaat tctcttttac ttttaccttg gttccaaaag
     3121 gaactgtggt ttcattgcca tcaacttgaa aagttacttc attaaaaggg ttgctaaatt
     3181 caagatattc aggatagagc cttgtttgaa atcggttgcc gtattggata taaaaagaat
     3241 tattttcagc tatgaccgcg gtaagttcat tgctggtatt ataatttaac tccttattaa
     3301 caggaaaagg cacataattg ataacttgtc ttggattttt taaagaaagt aaaattttat
     3361 catcaaaaag cttgacttcg agctcttgat tgatggcttt atcaacacct tgtggggtaa
     3421 gttcaaaagt tctagtaaat tcaattcctg ctgttttgag atagttttcg atggccaaaa
     3481 gatgataata agctcttaga tttacaggca aatttttact tgcttcattt gcaaaagcgg
     3541 ctttgtgatt tgaaatcaca aaataagtta aagctttaag catttccgca tcgccaagct
     3601 cttgggtttt ggtgttttta agatgataag catgctttgg atcagcaagt gaagaattga
     3661 cactatttac ggtttgagtg gcgatatttt caagatcagg gtatttgctt gcattgattt
     3721 cacttgtgtc aatcacgctt gaatttcccc aacgcttagg attttgcata gcatcgatat
     3781 aggtgggctt ataaaaaccc caaccatcat gaagattgat gaccatactg acttcaggaa
     3841 gcaaaataag ctctttaatg cgtttaactg tttgataatc aggatctttt ggacttatgc
     3901 ttgcaaattt acggtttaaa tctccatttt tcccgcgtga gcgtttaata atgctatcaa
     3961 aagctaaatt aggagcaact atgattttac ccttagtgat attataatca ctcaaaagta
     4021 agcttgccgc atgaaatcca ccaggctcat cgccttgaat tcctccaaaa atcaaaaccg
     4081 tattgttatc atctaagctt tttccattct ctcccacgct aaattctaaa tctagagcaa
     4141 aaagtccgct tataaaaaaa ataatcgata taaaaaattt catttcattc cccttaaatg
     4201 ctctcttgtt ttataatcat actcaaaaac ctcatcaata cttgaaattt taggcacacc
     4261 aaaatgatcc aatgctttaa aaacaatatg agcgatatct aaaaattgta ttttatgatc
     4321 taaaaaattt tgcactccaa tttcgttagc agcattgata atcacgccta aatcaggatt
     4381 gtttaaaagc tcgtctttga gtttaaaaat aggatatttt ttcgtgctga ttttataaaa
     4441 ttttaaacca gaaagtttaa caaaatcaac cggctctaaa attttactat catgcttaga
     4501 aaaaatagcc tctgatatag atagtttcat atcagccctt gaaaaatacg ccgtacttgc
     4561 accattttta aactcacaca tggcatggac taaagatttt ggttcgatga gagcatcgat
     4621 atttttaaaa ttatacaaat gataagcttc gatgatttca aaaagtttat ttgccattgt
     4681 tgcactatct atcgtgatct ttgaacccat attccaattt ggatgcttta gagcatcttt
     4741 gacactcaca tgacttaaat ctttaatttt gtgtttataa aaagctccgc cacttgcggt
     4801 aacataaagc tttgctatgt cttttttacc ctcaagtaaa aatttcaaag ccgaatgctc
     4861 gctatctacg ggtaaaaatt tcgcaccttt tagaaatttt ccagcaacga ccaagctttc
     4921 tttgtttgcc aaggcgattt ttttgccaag ttcctttgct tttaaagtgc tttttaatcc
     4981 tgcaaaaccc acaatggcat tgagcaacaa atcatcttca cacaagctta aaatttcttc
     5041 taaaccctct tgtcctacaa aaactttatc gtgttttact aaatgcttat ctttagagtt
     5101 tttaatcgct acaaattggg gtttaaattg ttctatttgc tcatttaaaa gacttatatt
     5161 ttccccgcaa gcaagagcag aaatcttgat attttttaaa gtggcaagtt ttagggcatt
     5221 aagccctata cttcctgtac ttccaaaaac tatcataaaa gagcaaccat cacaaaagta
     5281 gcaatgatca ccgcatcgat cctatcgagc acacccccat gaccagggat aagatctcca
     5341 ctatctttta cacctgcttc tcttttaaaa taactctcaa gcaaatctcc aatgactgca
     5401 aaaatcgcta caaaaaacga acaaagtaaa gaaagccaaa aactataaac aaaaattccc
     5461 aaaatagttc caataacact cgcacaaaca agaccaccta tcacaccttc tagggttttg
     5521 ttaggacttg ttggagaaaa aggagtttta cccataagtt ttccgataaa atacgcccca
     5581 ctatcacaag ctgcaacgat aatgataagc caaaaaagtg caaacatacc ctgatctaaa
     5641 tacacctgcc aaagcgctaa tacaggcaaa ctaggataaa tataaataag agctggtttt
     5701 aaggaagcct ttttataaac caaatatcca acgactaata acaaagctaa aatcccaaaa
     5761 agcaaagctt tatgcgataa acttcccaaa ataaaagcta tagccaaagg gataatagaa
     5821 atattttcta aagcaaaaag tttttttgct tcactaaaag ataaatacaa taaaaccgca
     5881 aaaacgataa aattgataaa aaattgatca atcaacgcga taataataat agcccctatc
     5941 atcacaagag ctgaaataat tctagttgta ttaaacatat ttttccttat atactaatat
     6001 ctaagcgatg aatgctttgt gcgtctttaa aatttggatc tttagactca tcttcttcat
     6061 ttttctcatc atcgctggtt ttagcttctt gattgtgttt tttctttttt tcttcttgtt
     6121 cggctttttc tttgatctct tctttgattt catgagtctc attgactttt tcaagcttgt
     6181 ttaaagtttt ttctttttca ttaaattcag ccatatttag cgtagctgca aaaccttctt
     6241 ttgcaagctc attgcttgct tgtgtagctg gataagccat attttgatta acaaaattca
     6301 tatttcctat tgggctaact ggcattttaa tcctttgtga tattaatact tttaaaattt
     6361 gtatatttta caaacgcctt ttgctgaacc ttaacaaaat tctttaaagt ataatcgacc
     6421 caatatgaac ctttctttaa tcctgaaaaa ttcacgcaaa gccttgcgct aaattctatc
     6481 acttcttcgc tgattttttg cttgtttgaa ataattaaaa catgagaact tggaatatct
     6541 cttacatgca gccacaaatc atcttttttt gcgctcttta gcaaattttc attgcctttt
     6601 tcatttttgc ctacgcaaat tttaaactca ttaaaataaa aattagctat gccattatct
     6661 tgcttgtttt cttgattttt cttggtgctt tttttaggca ataaaatttc aagctcaaat
     6721 tcatttttag ccttgcttag catttctttt aagccataag caaagtctaa tttttctttt
     6781 aaattttctc tttgtaaatt taaatttcta gctttttgtt ctaatttttt agcattttta
     6841 taaaataaat tagcgctttc ttttggactt aaatcgagtt taaattttac tttttttcct
     6901 tcaaaatcat caagttcaaa ttctctttcg tattctttta aaatgcttaa attagcaaat
     6961 aaaatatccg cttgctttct taaatttaaa gcttgatcta ataaaacttc ttctttgtct
     7021 aaagcaagat aaagctcttt taaattttct atttttttat cgatttgagc gagtttgagt
     7081 gtttgaattt gcttgatttt atttgcatgt aaaatttcaa atttttgagt aaaataatct
     7141 ttaaaatttt ttatttcttc aaatttttca tccattttat aaggctttaa agcctctaaa
     7201 atcacattag gttttacaac acgataactt ttatcaatat gccttaaagc ctctataatc
     7261 aaatcttttt catctgtaat aattacattg gtatttttac ctgtaaattc aaaataaatc
     7321 ttgctttcat agctcttata agctttatct accttaacac taaaacacaa aatgcgatta
     7381 tcttgaagca atttcacctc tttgataaaa gcattattaa agtatttttt tagcataaaa
     7441 tcaaaaggag cgttatagtt tttactcatt aattttgcag tataaatagc actcattcca
     7501 cgagttaaat caaaaataaa tctttctcta ttaaagctta gctctaaaat attatcatta
     7561 acacgcttga taaaatcgat ttttttaaat tgggaaaaaa aattttgtaa ttgcataagt
     7621 tctgtgtatt tcataaaaga gattataaga tatttttgat gaatttatga tagaattgaa
     7681 ataaaaaagg aaatttttga aacttgaaaa tttaaattgc gtgattttat gcggtggtaa
     7741 atcaagtcgt atgggagagg ataaaagcaa attgattttt aaaaatcaaa ccttaaccca
     7801 atttcaagta gaaaaatttt caaaaatatt taaaaatgtt tatgtgagtg ctaaagagga
     7861 caaatttgga gcaaaattta aactcataaa agattgccct gaatttgaga tttattcccc
     7921 catgcttgca ctttattcta tactttcaaa ttttaaagat gaatttgttt ttattttaag
     7981 cgtggatagt cctaatctaa gtgataaaga acttttaaaa ttcttgcctt ctttaaagca
     8041 agactatcaa atcatcattg ccaaaactcc ttcacataaa catcctttat gcggatttta
     8101 tcacagctct gtagctcact tttgtaaaga attgctagaa aaaaatgaac aaaaaatcgc
     8161 tttattattt tctaaagcaa agacccactt tgtagatttt gaggatgaaa gtcctttttt
     8221 aaatcttaat ttttatcaag aatatgagca atttaaaagc gagtacgagt gaaaaaaatt
     8281 ctttttttga tattttttta tagtttggta ttttgcgatg attttgaaca agctttagaa
     8341 tttgagaaaa aaggacaata tgaaaaagct atgcaaattt ataaaaaact agccttgcaa
     8401 aattctccta aacaagattt aaaagaaaat aatgcttctt tactttcaag cataaagcac
     8461 gaaacacaaa atacccaaaa aacacctagc acaaaagagg atttttcgcg cattgctttg
     8521 gcaaattatt taggagaaaa ttcaagtttt aatccccttg gaatcagctc atataagatg
     8581 aattatttct taccttttgc ttatagtttt ggctcattag gcggggaaaa tagaaaaact
     8641 gaaatgaaat ttcaactcag tattaaaaaa agattatttg aagatttgtt aggattaggt
     8701 gaaaaatatt atgtaggcta cactcaaaca tcttggtggc aaaactataa acattcctca
     8761 ccctttagag aaacaaatta tcaacctgaa ttttttgtag atattccttt acattttgaa
     8821 gattataaat ttcttaataa tctaagagta ggaattttgc atgaaagcaa tggcaaagga
     8881 gatgagaatt tagaatcacg ctcttggaat agaatttatg cttcaagcgt atttttatat
     8941 cagcgttttt tatttattcc tagaatttgg tatagaattc ctgaaaacag cgaagatgat
     9001 gataatcctg aaatcacaca ttatatggga aattttgata tcaatatggg gtatttagga
     9061 aatgattatt ttataaatct catgctaaga aataatcttg attttcatga caataaaggc
     9121 gctgtgcaag tggatatagg atatgatatt tttgataatg gaatttattg gtatttacaa
     9181 tacttcaatg gctatggaga aagccttata gattacaaca aacgcttaca aagactttct
     9241 acgggatttt tgatttcata ttaaatttaa ttttcttttt tgtagattaa attaaaacaa
     9301 tcaattgaga ttttataaat ttttatagtt ttttaaatta ttttatttta aaatacgatt
     9361 ttatttttga taattattat tactataagg aaaaaattgc tttttaaaca cttgtttagt
     9421 ttaaatattc ttttaatttt acttgttgtt tttggaataa taagcttatt tataggggtt
     9481 attcgtatca atttagacga tattttttca ctcagcacta cccagctcga aatcatttta
     9541 cttacaagaa ttccaaggct tattgcaatt ttacttacag gtatgagtct tagtatatgc
     9601 ggactcatca tgcaacaact cacgcaaaat aaatttgttt ctccaaccac tgcagggact
     9661 atggattgtg ctaaatttgg cattttgatt tctttaatat tttttacagg agcttctttt
     9721 tttactcaag ctctcatcgc atctattttt gctcttttag gttcttttat atttatccaa
     9781 attctaagaa aaattaaact taaagatgtg atttttgtgc ctttgatagg attaatgttt
     9841 ggtgggatta taaatgctat aaccactttt tttacttatg ctttaaatta tatacaaaat
     9901 atccaaggct ggctacaggg cagtatggca aatgttatgc agggaaatta tgaattgctt
     9961 tatatttctt taccgctttt tatacttgct tattttctag cccataaaat cactatagca
    10021 ggtatgggag aagatcttgc tttaaatctt ggagtttctt ataatacaat cttattttta
    10081 ggcttaataa tagtttctat tatcactagc gtagtaattg taagcattgg agttatacct
    10141 tttttaggtc ttatcatccc taatcttgtt gccatttatc gcggggataa tcttaagaaa
    10201 aatcttatct atatagcatt atgcggggct ttgtttttac ttatttgcga tattatctca
    10261 agacttgtga tttttccttt tgaaatgcct ttgagtataa ccacaggtgt tttgggctct
    10321 ttaattttta tttttctttt actcaaaagg aaaacttatg cgtaaaaaaa tcttaatctt
    10381 agctttttta acccttataa tggcacttgt ttttgtattt gcaggtttaa aagattttga
    10441 tgaatacgca ttaaaaaatc gctttttgca aatcgcagct attgttatag tggctatttg
    10501 tatagctata tcaactgtga tttttcaaac tctttgcaat aacaaaattt taacccctgc
    10561 catcataggc ttggattctt tatatatgct tcttcaaagc gcccttgtct tttctttagg
    10621 ttctgcaaat ttgagtgtat atagaaatga tattaatttt ttaatcactc tagcttgtat
    10681 ggttgtattt tctttaggac tttataaaat tctttttagc agtgataaaa gtatttatct
    10741 tatcatgctt ttaggtttga tttttggaac actttttagc acactaagct ctttttttga
    10801 aattcttatc gatcctgatg aatttatgat tattcaagga agaatgtttg caagttttga
    10861 taatgtagct tttgatgttt tagcccttgc ttatatcgta actttgctta gttttatttg
    10921 gatttttcgc tatatgaaat ttttagaccc tttaagtttg ggcaaggatt tatccataaa
    10981 tttagggata aactatcaaa aaatttcaaa acatcttatg ataataattg ctattttaac
    11041 ttctattagc acagcacttg tgggtcctat caccttccta ggacttttag tagtaaatat
    11101 cacttacgaa ctttttaaaa ctgcaaagca tagcatttta ctacttgctt gcatactcat
    11161 tagcatttta gctttacttg ggggagtatt ttttgtctct agaatttttg attacaatac
    11221 aaccataagc gttattatca attttttagg tggaatatat tttatctatc ttgtattaaa
    11281 aggcaataaa ctatgataag attacaaaat atcaccaaat gctacgatca aaaggctatc
    11341 atttcagatc ttagtatcga ttttcataaa ggaaaaatta cttccattat aggggcaaat
    11401 ggagcaggaa aatctactct tttagctctt gcaagtcgtt taatcaaacc cgatagtggg
    11461 cgaatctata tcgatggcat gaatttaaca ctatacaaag aacaagatct tgcgcaaaaa
    11521 atttccattc ttaaacagca aaatcatatt aatttaagat taaaagttga agaattggtc
    11581 gcatttggac gctttccaca ctctcaagga agaattaatt taaacgataa aatgaaaatc
    11641 gatgaagcac ttgagtatat gggacttaac actctaagaa atgaattttt agacagctta
    11701 agtgggggac aaaaacaaag agcttttata gcaatgatta tcgctcaaga tactgaattt
    11761 atcatgtttg atgaacctct taataatctt gatatgaaac atagcgtaca aatcatgcaa
    11821 cttatgaaaa atttagtaaa agactttaat aaaagcatag ccgttgtact tcatgatatc
    11881 aattttgctt cgatttattc tgatgaaatc atagccctaa aaaatggaaa actcttaaaa
    11941 cagggtttaa aagatgaaat catccaagaa gatgttttaa gacaaattta tgatatggat
    12001 atccctgtaa gtcagattga tgggaaaaaa atttgtattt atttctaaat aaaggagaat
    12061 atatgaaaaa atctttagtt tttgcatttt ttgcattctt tttaagtcta attttaacag
    12121 cttgcgattc taaatccaat gaaaacaacg caagtactgc aataaaaact agcactacgg
    12181 taaaggttat acctattagt atgagtgatg agggtgatag ctttttagta aaagatagcc
    12241 taggtgaaaa caaaattcca aaaaatcctt ctaaagttgt gattttagat cttggaattt
    12301 tagatacttt ccatgcccta agacttaacg ataaagttgc aggagttcca gctaaaaact
    12361 tgccaaaata cttacagcaa tttaaagaca agcctagtat aggtggagtt caacaagttg
    12421 attttgaagc tattaatgct ttaaaacctg atcttattat catttccgga cgccaaagca
    12481 aattttatga aaaattaaaa gaaattgctc caactatgtt tgtaggactt gataatgcaa
    12541 atttcttaag ctcttttgaa aacaatgttt taagtgttgc aaaactttat ggcttagaaa
    12601 aagaagcttc tgaaaaaatt gcagatatta aaaatgagat agaacaagca aaaagcatag
    12661 tagatgaaga taaaaaagct cttattgttc taaccaattc taacaaaatt tccgcttttg
    12721 gacctcaatc tcgctttgga atcattcatg atgttttaga aatcaatgct gtggatgaaa
    12781 atgtaaaagt aggcacacat ggaaaaagca ttaattctga atttatacta gaaaaaaatc
    12841 ctgattatct atttgtagtt gatagaaata tcattgtggg caataaagaa cgcgcacaag
    12901 gcatacttga taatgcactt gtaactaaaa ccaacgctgc tacaaataat aaaatcattt
    12961 atcttgatcc tgaatactgg tatctagcaa gtggcaatgg cttagaatca ttaaaaacca
    13021 tgattttaga agtaacaaac gctattaaat aaaccctatg taagagaagt tgttctctta
    13081 cattctctta tccaaatcca actatcaagt acaaatctta aacaaattta agtttatatc
    13141 cactataaaa aattcacttt cgcttcacat tcttttgtca aaataccata caaattgata
    13201 atcaaaaagg agagaaaatg attaacaaaa acaaattatt tagacaaatt cacatttatg
    13261 tgagtttatt tttcttaccc tgtgctgtac tttttgcact tacagggatt gcttatatcc
    13321 ttggagccga tcaagatacg ggtttaaagg tagaaactta taaacttgta aaaaatatag
    13381 aacctggtaa agaaaaagat gcactcatcc aatacttaca agaaaacaat ttaaaagttc
    13441 catctgacgc tgaagctact caaggcaaag gcaagggggc gaatatgggc ggaatgcacc
    13501 ataatgccaa tgcagctcct gctaatgtca aagctggcaa aggtaaaaac aatgaattaa
    13561 ctataggtgg agcacattat agcgccaata taactcctgt tgctcaaaat gagtatgtaa
    13621 taactcttaa aactagatct ttgttaggcg atatgatcat gcttcataaa gataaagggg
    13681 cgtggtattt ttctgtgctt agcataggct ttggtattgc tttattttta ctctatatct
    13741 caggacttat cattacttta tttgctagca aaaaagatag acaaaaacag cttgcaacac
    13801 ttggagctgg ggttgttatc actatacttt tagcttatct tagtctttaa tttttttatc
    13861 tagctttttt aagctaggta ttatctaatt ttttatataa tcacacttta atttattgga
    13921 cagatgggtg agcggctgaa accacacccc tgctaagggt gcagatctta atcgggtctc
    13981 gagggttcaa atccctctct gtccgccact gactttcaaa aaaaactatc aactatcatt
    14041 ttaattacct tttatatatt atttgcattt caaaaataaa ctttacaaag ctttttctta
    14101 atcaataaaa taaaattcaa ttttatcctt atttttcaac caaataacgc aagctttaaa
    14161 aataaaaatt tctatacttt atccatctaa aataaatgag cttttttcgt ataatccaat
    14221 aataaaaaaa attgttaatt tagtttatat ttagtattgc tctaaaatgt tgattgtata
    14281 ataacataat atttagattt tcgttttaaa ggagtgcaaa tgagtgatac tattatttta
    14341 gatattttat tagagaagta caataatgct aaatataaaa aggtcggaaa ctgtattaaa
    14401 cttcattatc aatatcacga tgtaaatgtg aatttatatt ttgatggtta tgataaaaat
    14461 tatccttcga cttctataat attagcaatg gataa
//
LOCUS       DAQUWA010000045        14072 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.045, whole genome shotgun sequence.
ACCESSION   DAQUWA010000045 DAQUWA010000000
VERSION     DAQUWA010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14072)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14072)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14072
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.045"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            54..2156
                     /gene="topA"
                     /locus_tag="R8X70_001223"
     CDS             54..2156
                     /gene="topA"
                     /locus_tag="R8X70_001223"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEF2929003.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKEYEVIASKGHIRDLPKSSFGI
                     KIENDEFIPEYRITSDHSVLVKELKEKAKGAKEIYLATDEDREGEAIAYHIAKAIGKD
                     ENVLPRIVFHEITKNAIENALKNPRKLDMNSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLNAELVEFDKAKIEKLT
                     ITNKDRAKLILEACKNEVYSISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     MIAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAVENARKFIQANFGKDYLPTKANVY
                     TTKAKGAQEAHEAIRPTNLNFTPEIAAKFLDKDELKLYTLIYNRFLACQMNPAISQTQ
                     NVFVKNDRAVFKISGRKILFDGYYKVYGDMDKDKILPNFKIGENLKIQNLEMNSHFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVKIDKKQLIPSEVAFSVTEVL
                     EKNFSDIVDSKFTSNLENTLDEIAEDKANWQETLKEFYYPFMRKVEEGKTKIASQKTV
                     TKLGENCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKNESKNEAEVSVSKAKAKG
                     IGITCPSCKEGEIVERLSKRGKFYGCSAYPKCNFISKYKPSDEKCEECGENLVIKELK
                     KGTFLECLKCKIKKEIKD"
     gene            2159..2995
                     /locus_tag="R8X70_001224"
     CDS             2159..2995
                     /locus_tag="R8X70_001224"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HEF2929004.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQI
                     VLEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVE
                     QLKELKKAGIFSYNHNLETSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPKLSADEALKIISDTKEALPN
                     TVVMVAGGREVVLQERQYEIFKAGAGAIVIGDYLTTKGEEPSRDIVKLKEMGFTFASE
                     CH"
     gene            2976..4151
                     /locus_tag="R8X70_001225"
     CDS             2976..4151
                     /locus_tag="R8X70_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEF2929005.1"
                     /translation="MHPSVIDSQGLIDLQILIVIALCLLFSPHIAKILRLPISATEII
                     LGALMAYFGFIGKSENFTILANVGFYYLMFIAGMEVNLRAFFNMDKEIAKKSFFYIIL
                     LYSFSSAIVWVFELSFVFVLIIPVMSVGLLSLLYKDFGKECYWLNTAMIVATLAEVVS
                     IVLLTIAGAFLREGTNIIDVVQSILYLNIFLGLCLLGFKVLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMIITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSSFG
                     HGFLIPIFFIHIGTTFDLKMILEYEIVFDAILLMFVMVGLRILCASVFWKKIGFQNMV
                     LFGLSHSMPLTLLIATATLGYSGKVISEELYSALILTALFEAIVVMSAIKFISNIKK"
     gene            4281..5549
                     /locus_tag="R8X70_001226"
     CDS             4281..5549
                     /locus_tag="R8X70_001226"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEF2929006.1"
                     /translation="MSNSVTVTDNRNGKSYEFPIYDGTTGPSVVDMGSFYKQTGMFAY
                     DEGLTSTATCKSKITYIDGEEGVLMHRGYPIEWLAENKLFLDVVHLLLYKELPSNERL
                     EAFRYELKKRSYIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVREEYM
                     EMAARVVAKIPTIVAAAYRYKNGFPMAYPNLDRGFTENFLYMLRTYPYDHVELKPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHAHPYACISAGIGALWGHAHGGANEGVIRM
                     LEEIATVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGID
                     TNLIKVATRIEEIALQDDYFVQRNLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQETLKIVRPRQLYLGETSKI"
     gene            5623..6387
                     /locus_tag="R8X70_001227"
     CDS             5623..6387
                     /locus_tag="R8X70_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEF2929007.1"
                     /translation="MFKLDNLLKTAIDASNEASKAILKERKNLQIWQKQDQSPLTSAD
                     LASNEILNDILGKTDIKILSEEGLLSQEESKNLQSYWLIDPLDGTSGFLKGSDEFCIM
                     ISLIHEDRPILALIKNPSKGDIFYAHQNTRVYKNDKILDISEQDFIDNQSKALLSVNH
                     LSKEDENFAKKHNLTPINIGSGLKFCAILEGRAGVYKRFEKLNSWDIAAGDFLVNQKG
                     GFMGTFSKEMILYSPLNYKCEPFICVSKKSFLNIYT"
     gene            6424..7185
                     /locus_tag="R8X70_001228"
     CDS             6424..7185
                     /locus_tag="R8X70_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929008.1"
                     /translation="MKIFLILFMSILLNSSLFANNFSQKKIIKLEQQESFEIIDLQQN
                     VEKQNLDQQKGIFDSSSLMSKKESIRKDNDVDFAIAMSFRQNFGYALDGFNISAKEFS
                     TLFAKNLVDNLRLNFVNSAANGVYQDLRTLARFSPKDSKLLNVSPFLKKEKDKSQIYA
                     KFTDYLVVVNLDDFYVNITNYFVAITKNAVANINFKVVSTSNGKILTSKNVRLNFALH
                     AQDPRVNYQELVNQMPNMLAEVINKELEKLNLTVQ"
     gene            complement(7190..7363)
                     /locus_tag="R8X70_001229"
     CDS             complement(7190..7363)
                     /locus_tag="R8X70_001229"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929009.1"
                     /translation="MQININLEEMTKWQITYELKRILSSLDPITAHEIAKELRQEFLS
                     IEELQDRIRQIND"
     gene            complement(7472..8248)
                     /locus_tag="R8X70_001230"
     CDS             complement(7472..8248)
                     /locus_tag="R8X70_001230"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEF2929010.1"
                     /translation="MIIDFKKYSSVKIGGEFEVEVLEQIREFDGFLIGGANNLLISPK
                     PKNIGILSDNFNFIEILEQNKDFLHLRIGCKTKASQMYRFSKENNLYGFEYLSKIPGT
                     LGGLLKMNAGLKDECISQNLVKIATSKGEILRENIDFSYRFCPLNMPFFWAEFKLGFG
                     FDKIKDENLKNARNNQPSGASFGSIFKNPKGDFAGRLIEAVGLKGFSKGDAMLSDKHA
                     NFLINKKNASFDDAIFLIELAKKKVFEEFGIKLEEEVIII"
     gene            complement(8245..8514)
                     /gene="fliQ"
                     /locus_tag="R8X70_001231"
     CDS             complement(8245..8514)
                     /gene="fliQ"
                     /locus_tag="R8X70_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HEF2929011.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLIISIFQATTQI
                     NEMTLSFVPKIILVVIVIIFLMPWMTTTMIDFTENILNQIPTFIK"
     gene            complement(8526..9389)
                     /locus_tag="R8X70_001232"
     CDS             complement(8526..9389)
                     /locus_tag="R8X70_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HEF2929012.1"
                     /translation="MKKTITIAHSPDADDIFMYMAIKLGWIGNDFDYKNTALDIQTLN
                     DLALKNEFDATAISFGLYPLITKEYALLRTAVSFGEGYGPKLIKKQNTHLKRNFKVAL
                     SGANTTNALIFRMKYPEARIIYKNFLEIENAVLSGEVDAGVLIHESILEFDSSLCVEA
                     EIWNIWLELAQENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIANSNRRILAPMLM
                     ERNLIRVNEEKLDTYLNLYANKNSICMSETQFKAVDVLFKLGYDYKFYDKIIHAKDYL
                     IPSEYEEFRNS"
     gene            9499..10530
                     /gene="recA"
                     /locus_tag="R8X70_001233"
     CDS             9499..10530
                     /gene="recA"
                     /locus_tag="R8X70_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEF2929013.1"
                     /translation="MDDNKKKSLDAALKSLDKAFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGIPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVDTDNLYISQPDFGEQALEIVETIARSGAIDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKEIQNSMGIEGMIS
                     SSEDEEGEE"
     gene            10530..11774
                     /gene="eno"
                     /locus_tag="R8X70_001234"
     CDS             10530..11774
                     /gene="eno"
                     /locus_tag="R8X70_001234"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEF2929014.1"
                     /translation="MLVIEDVRAYEVLDSRGNPTVKAEVVLSDGSMGAAIVPSGASTG
                     SKEALELRDNDERFGGKGVLKAVSNVNETIADEILGLDALNQAQLDDTLRELDGTNNY
                     SKLGANATLGVSMATARAAANALGVPLYRYLGGANASILPVPMCNIINGGAHASNNID
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELANLGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKEGKYHMEGKAFSSEDLIERYVELCAKYPI
                     CSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDVFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIELESDEYLGEKL"
     gene            11840..12043
                     /locus_tag="R8X70_001235"
     CDS             11840..12043
                     /locus_tag="R8X70_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929015.1"
                     /translation="MVFWAFLVIIGAIYFGNMLFGQYSLDTLLSLEATKEELNKKISF
                     LKEQNAKAQKDYFELQGLYPNEN"
     gene            12033..12695
                     /locus_tag="R8X70_001236"
     CDS             12033..12695
                     /locus_tag="R8X70_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HEF2929016.1"
                     /translation="MKTKILGIFLIFISLLNAEENPFKSEQNMSMIMPPDFQKEDIKF
                     NSNARVLKSVSFNYINLDGSEEVLNVDINKSIDWHDTYTLVRTKSPDPSKVFDVSVTI
                     PERNDSKKESNGTANIEIPLQVDKIYDFISYAVYKNKIKLNTSDELISDFSIGNPSKI
                     VVDFKSDLVNPTKNIRISNSLFKRIDFGSHKGYYRLVIYLDGNYNYNIQKDATGYMIN
                     LL"
     gene            12695..13534
                     /locus_tag="R8X70_001237"
     CDS             12695..13534
                     /locus_tag="R8X70_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEF2929017.1"
                     /translation="MRIFVFLWCVSFAFASDILLLSKISEQEIQNKNFNGYLMSEKLD
                     GVRGIWEVGKFKTRQDNPIYTPSYFTYNFPSFKLDGELWIARAKFDEVSALIRGDNLD
                     SSLWKSVTYNVFDVPNACEEFKLTSCTLSNRLKVLEQYLQQNPNPYIKIIKQIPIKDQ
                     EHLKEFYKDIVLNKGEGVVIRKDLAPYEKGRSKNAFKLKPYEDAECKVIGYTEGKGKF
                     QGKIGALLCQMPNDRVIRIGSGLKDKDRENPPKIGSIVTYKFNGLTKNSLPRFPVFLR
                     IRD"
     gene            13581..13658
                     /locus_tag="R8X70_001238"
     tRNA            13581..13658
                     /locus_tag="R8X70_001238"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13616..13618,aa:Pro,seq:tgg)
     gene            13683..13759
                     /locus_tag="R8X70_001239"
     tRNA            13683..13759
                     /locus_tag="R8X70_001239"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13717..13719,aa:His,seq:gtg)
     gene            13764..13840
                     /locus_tag="R8X70_001240"
     tRNA            13764..13840
                     /locus_tag="R8X70_001240"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13798..13800,aa:Arg,seq:tcg)
     gene            13855..13931
                     /locus_tag="R8X70_001241"
     tRNA            13855..13931
                     /locus_tag="R8X70_001241"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13889..13891,aa:Arg,seq:tct)
     gene            13937..14021
                     /locus_tag="R8X70_001242"
     tRNA            13937..14021
                     /locus_tag="R8X70_001242"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13971..13973,aa:Leu,seq:tag)
BASE COUNT         4816 a         2013 c         2633 g         4610 t
ORIGIN      
        1 ttatctttaa ttattaatag tatttttaat gaaatttaca aaggcagtag caaatgaaaa
       61 aaaatttgat catagtcgaa tctcctgcaa aagcaaaaac tataggcaat tttttgggca
      121 aagaatatga agtcatagct tctaaagggc atataagaga tttacctaaa tcaagttttg
      181 gtataaaaat agaaaatgat gaatttatcc ctgagtatag aatcacaagc gatcatagtg
      241 ttttagttaa agaacttaag gaaaaagcaa agggagcaaa agagatttat ttagcaaccg
      301 atgaggatag agaaggagag gctatagcct atcatattgc aaaagctata ggcaaagatg
      361 aaaatgtctt accgcgtatc gtttttcatg agattaccaa aaatgctatc gaaaatgctt
      421 taaaaaatcc tagaaaactt gatatgaatt ctgttaatgc tcagcaaact aggcgtttat
      481 tagatcgtat tgtaggatat aaattaagtc ctttgctagg gcaaaaaatt caaagaggct
      541 taagcgcggg ccgtgttcaa agtgcggctt taaagattat cgttgatcgt gagaaagaaa
      601 ttcgtgcttt tgttcctttg gaatatttta gtatagatat gatatttcaa aaggatttaa
      661 atgcagaact tgtcgaattt gataaagcaa agatagaaaa gcttaccatt accaacaaag
      721 atcgtgctaa acttatacta gaagcttgta aaaatgaagt ttatagtata agtgacattg
      781 aaagcaaaga aagaaaaatt gctccacctc caccttttat gacttcaacc ttacaacaaa
      841 gcgcaagcaa tcgtttggga tttaacccta aaaaaactat gatgatagct caaaaacttt
      901 atgagggagt aaatactcat gagggtgtga tgggggttat tacttatatg agaaccgata
      961 gtttaaattt agccaaagaa gcagtagaaa atgcaagaaa attcatacaa gcaaattttg
     1021 gcaaagacta tcttccaacc aaagcaaatg tttatactac aaaagctaaa ggcgctcaag
     1081 aagctcatga agctatacgc cctactaatt taaattttac tccagaaatc gcagctaaat
     1141 ttttagataa agacgagtta aagctctata cgcttatcta taatcgtttt ttagcttgtc
     1201 agatgaatcc tgctatctct caaactcaaa atgtttttgt aaaaaatgac agagcagtgt
     1261 ttaagataag tggtaggaaa attctttttg atgggtatta taaagtttat ggtgatatgg
     1321 ataaggataa aattttacca aattttaaaa taggtgaaaa tttaaaaata caaaatttag
     1381 aaatgaactc acattttaca gaacctcctt caagatattc cgaagctgga cttgtgaaaa
     1441 aacttgaaag cttaggcata ggtcgccctt caacttatgc gccgactatt tctatactca
     1501 caagccgtga ttatgtaaaa atcgataaaa aacaactcat tcctagtgaa gtcgctttta
     1561 gtgtaactga agtgcttgaa aagaatttca gtgatatagt agatagtaaa tttacttcaa
     1621 atcttgaaaa tactttagat gagattgcag aagataaagc taattggcaa gaaactttga
     1681 aagaatttta ttatcccttt atgaggaagg ttgaagaagg aaaaacaaaa attgcaagcc
     1741 aaaaaacggt gactaaattg ggtgaaaatt gccctgattg tggtggtgaa cttgcgatta
     1801 gaaaagggcg ttttggagaa tttgtagctt gtttaaattt tccaaaatgc aaatactcaa
     1861 gaaatttaaa aaatgaaagc aagaatgaag ctgaagtaag tgttagcaag gctaaagcaa
     1921 agggcatagg cattacttgt ccaagttgca aagagggtga gatagtagag cgcctttcaa
     1981 aacgcggtaa attttatggt tgtagtgctt atccaaaatg taattttata agtaaatata
     2041 aaccaagcga tgaaaaatgt gaggaatgtg gagaaaattt agtgataaaa gagctaaaaa
     2101 aaggcacatt cttagaatgt ttaaaatgca aaattaaaaa agaaataaag gattaatcat
     2161 gcaaatcatg ctttgtgcta tttcaaatat agccagtgga aattgttctg aagattgcaa
     2221 atactgcacc caaagcgctc atgtaaaaac agatattcaa aaatatcgtc gtaaagaact
     2281 ttcacaaatc gttttagaag caaaaatggc aaagaaaaat gaagccttgg gtttttgttt
     2341 ggttacagca ggacttgggc ttgatgatga aaagcttgag tatgtttgtg aggctgctaa
     2401 ggctgtgcaa aaagaagtgc ctaatttgct tttaattgcc tgtaatggta tggcaagcgt
     2461 ggaacaactc aaagaactta aaaaagcagg aattttttct tataatcaca atcttgaaac
     2521 ttctaaggaa ttttttccac aaatttgcac cactcatact tgggaaagta gatttcaaac
     2581 caatttaaac gctaaagaag caggacttat gctttgttgt ggtggaattt atggtatggg
     2641 tgagagtgaa gaagatagac taagttttag aaaatctttg caagaattac agcctttttc
     2701 aacgcctatt aattttttta tagccaatga aaatttaaaa ctacaagttc caaaattaag
     2761 tgctgatgag gctttaaaaa ttataagtga tactaaagaa gctttgccta atactgtggt
     2821 tatggtagca ggaggtcgtg aggtggtatt gcaagaaaga caatatgaaa tttttaaagc
     2881 aggtgcaggt gctattgtaa taggagatta tcttactaca aaaggtgaag aaccaagtcg
     2941 tgatatagta aaacttaaag aaatgggatt tacttttgca tccgagtgtc attgattcac
     3001 agggtttaat tgatctacaa attcttattg ttatagcttt atgtttacta ttttctccac
     3061 atatagctaa aattttgcgc ttaccgattt cagctactga aatcattttg ggcgcactta
     3121 tggcgtattt tggttttata ggtaagagtg aaaattttac tattttagct aatgtgggtt
     3181 tttattatct tatgtttata gcgggtatgg aagtcaattt gcgcgctttt tttaatatgg
     3241 ataaagaaat tgccaaaaaa agcttttttt atatcatatt gctttattct ttttcatcgg
     3301 ctatagtatg ggtttttgaa ctttctttcg tgtttgtttt gattattccg gttatgagcg
     3361 tggggctctt atccttgctt tataaggact ttggtaaaga gtgttactgg cttaatacag
     3421 ctatgatagt agcaacatta gctgaggttg tttccatagt gcttttaacc atagctggag
     3481 cttttttacg cgaggggaca aatattatcg atgtagtaca aagcatttta tatcttaata
     3541 tatttttagg gctttgttta cttggtttta aagttttagg tgtgcttttt tggtggtatc
     3601 cccaacttaa agtcgtgctg atgccttggg aagataaaaa tgaaaaagat ataagatttt
     3661 gtatggcaat ttttattttg attatcgtgg ctatgattat tacaaagctt gaaatcgttt
     3721 taggctcttt tattgcaggt tcttttatcg caactttttt tgaccataaa aaggatttag
     3781 agcataaact ttctagtttt gggcatggtt ttttaattcc gatttttttt atccatatag
     3841 gaactacttt cgatcttaaa atgattttag aatatgaaat cgtatttgat gctattttgc
     3901 tgatgtttgt gatggtaggt ttgagaattt tgtgtgccag tgttttttgg aaaaaaattg
     3961 gctttcaaaa tatggtttta tttggactga gtcactctat gcctttgact cttcttatcg
     4021 ctactgctac gctaggatat tcaggaaaag ttatcagcga agaactttat tcggcgctaa
     4081 ttttaacagc tttatttgaa gctattgttg tgatgagtgc gattaaattt atttcaaata
     4141 ttaaaaagta atctaaataa cacaggttac ttttttactc aaaaaggtta atgaatttta
     4201 aaattattga caatgaaaaa gttgaaaatc gcctttttta gctagaatta ctaaaagtaa
     4261 agattaaaaa aggagcaaaa atgtcaaatt ctgttactgt aactgacaat agaaatggta
     4321 aaagctacga attccctata tatgatggta ctactggtcc aagtgttgtg gatatgggga
     4381 gtttttataa acaaacagga atgtttgctt atgatgaagg tttaacttct acagctactt
     4441 gtaaatcaaa aattacttat attgatggtg aagagggtgt tttaatgcac cgtggctatc
     4501 ctatagaatg gcttgctgaa aataaacttt ttttagatgt agtgcatctt ttactctata
     4561 aagaacttcc aagcaatgaa agacttgaag catttagata tgagcttaaa aaacgctctt
     4621 atatacatga gggtatgcat cgtctttttg attctttccc tgataatgct caccctatgg
     4681 ccgttttaca aggcgctgtt tcatctctta gtgcttttta tcctgatcat ttaaatatga
     4741 atgttagaga agagtacatg gaaatggctg ctagagttgt agcaaaaatt cctactatag
     4801 tagccgctgc ttatcgttat aaaaatggtt ttcctatggc ttatcctaat ttagatcgtg
     4861 gatttactga gaacttttta tatatgttaa gaacctatcc ttatgatcat gttgagctta
     4921 aacctataga agtaaaagca ctcgatactg tatttatgct tcatgcagat catgaacaaa
     4981 atgcttctac ttctactgtt cgtgccgtag gttctactca tgcgcatcct tatgcatgta
     5041 tttcagcagg tattggagcg ctttggggtc atgctcatgg aggtgcaaat gaaggcgtta
     5101 ttagaatgct tgaggaaata gctactgttg atagggtgga tgaatttata aaaagagcaa
     5161 aagataaaaa tgacccattc cgcttgatgg gctttgggca tagggtttat aaaaattttg
     5221 atccgcgtgc aaaagtactt aaaaagcttc gtgatcaatt aatcgatgag ttaggtattg
     5281 atacgaattt gattaaggtg gcaactcgta tagaagagat tgccttgcaa gatgattatt
     5341 ttgtacaaag aaatctttat ccaaatgtag attttcatag cggcttaatt ttaaaagctc
     5401 taggaattcc aaatgaaatg tttgcaacgc ttttcgtgat cggacgtaca ccaggctgga
     5461 tagcacaatg gatagagcaa aaagagcaag aaacactaaa aattgttcgt ccaagacagc
     5521 tttaccttgg agaaaccagt aaaatttaaa tgattgtgtg aaattaactt tttcacacaa
     5581 acttcttata taatttcaaa agaatatttt gaaagtctta caatgtttaa actcgataat
     5641 ttactaaaaa ccgccataga tgccagtaat gaagcctcta aagctatttt aaaagaaaga
     5701 aaaaacctac aaatttggca aaaacaagat caaagcccct taacatcagc cgatcttgct
     5761 tcaaatgaaa ttttaaacga tattttagga aaaacagata ttaaaatttt atctgaagaa
     5821 ggtttgctaa gtcaggaaga aagtaaaaat ttgcaaagtt attggcttat tgatccgctt
     5881 gatggtacaa gtgggttttt aaaaggtagt gatgaatttt gcattatgat cagtttgatt
     5941 catgaagata gacctatttt agctcttata aaaaatcctt caaaaggcga tattttttac
     6001 gctcatcaaa atactagagt ttataaaaat gataaaattt tagatataag cgaacaagat
     6061 tttatagaca atcaatctaa agctctttta agtgttaatc atcttagtaa agaggatgaa
     6121 aattttgcta aaaaacacaa tttgacacct attaacatag gatcagggct taaattttgt
     6181 gctattttgg aaggtagagc aggggtttat aagcgttttg agaagttaaa tagttgggat
     6241 attgcagctg gagatttttt agtcaatcaa aagggtggtt ttatgggaac cttttctaag
     6301 gaaatgattt tatattcccc tttaaattat aagtgcgagc cttttatttg tgtttctaaa
     6361 aaaagttttt taaatatata tacataaaaa cagcatataa ttttaaaatc ttaaaggata
     6421 aaaatgaaaa tttttcttat tttatttatg agtattttgt taaattctag tctttttgca
     6481 aataattttt cgcaaaaaaa aatcattaaa ctagaacagc aagaaagttt tgaaatcata
     6541 gatcttcaac aaaatgttga aaaacaaaac ttagatcagc aaaaagggat ttttgatagc
     6601 tctagtttga tgagtaagaa agaaagcatt cgtaaagata atgatgttga ttttgctata
     6661 gctatgagtt ttaggcaaaa ttttggctat gctttggatg gttttaacat aagtgctaaa
     6721 gaattttcta ctctttttgc taaaaattta gtggataatt taagattaaa ttttgtaaat
     6781 tcagctgcaa acggtgttta tcaagattta agaactttag ctcgttttag tcctaaagac
     6841 tctaaattgc ttaatgtatc tcctttttta aaaaaagaaa aagacaaaag tcaaatttat
     6901 gccaaattta cagactatct tgtggtggta aatttagatg atttttatgt aaatatcaca
     6961 aattattttg ttgcaataac caaaaatgca gtagctaata ttaacttcaa agttgtttct
     7021 acaagtaatg gtaaaatact cacatcaaaa aatgtaagat taaattttgc acttcatgca
     7081 caagatccta gggtaaatta tcaagaactt gtaaatcaaa tgccaaatat gcttgctgaa
     7141 gttataaaca aagagttaga aaaattaaat ttaacagtgc aataaaaatt taatcgttga
     7201 tttgcctaat gcgatcttgt agctcttcta tgcttaaaaa ttcttgtctt aattcctttg
     7261 cgatttcatg cgcggttata ggatcaagac ttgataaaat tcttttaagc tcgtaagtga
     7321 tttgccattt agtcatttct tctaggttga tatttatttg catgaattat ccttttatcg
     7381 taagaaaaaa ttgtctgatt gtagcgtgaa tttgattaaa aaatgctatc tttttaaaaa
     7441 catatattaa agaaagaagt agaaatttaa tttaaatgat aatcacttct tcttctaatt
     7501 ttatgccaaa ttcctcaaaa accttttttt tggcaagttc gataagaaaa atagcatcat
     7561 caaaacttgc atttttttta ttgatcaaaa aatttgcatg cttgtcgctt aacatcgcat
     7621 ctcctttgct aaagccttta agtcctacag cctcaatgag tcttcctgca aaatctcctt
     7681 ttggattttt aaagatagag ccaaagcttg ctccgctagg ttgattgttt cttgcatttt
     7741 ttaaattctc atcttttatc ttatcaaaac caaaaccgag tttaaattca gcccaaaaaa
     7801 aaggcatatt taaagggcaa aagcggtaac taaaatcaat attttcgcgt aaaatttcac
     7861 cttttgaagt ggcaattttg actaaattct gactgatgca ctcatcttta agccctgcat
     7921 tcatttttaa aagtccacca agcgtaccag gaattttgct aaggtattca aaaccataaa
     7981 gattattttc tttggaaaaa cgatacattt gacttgcttt tgtcttacaa cctatgcgaa
     8041 gatgtaaaaa gtctttattt tgctctaaaa tttcaataaa attaaaatta tcgcttaaaa
     8101 ttcctatatt tttaggctta gggcttataa ggagattgtt cgcaccgcct attaaaaagc
     8161 catcaaattc gcgaatttgt tctaaaactt cgacctcaaa ttcgcctcca atctttacag
     8221 atgaatattt cttaaaatcg ataatcattt gataaaagtt ggaatttgat ttaaaatatt
     8281 ttcggtaaaa tcaatcattg tcgtagtcat ccaaggcatt aaaaagatga tgactattac
     8341 tactaagatg attttaggca caaaagaaag cgtcatttca ttaatctgtg ttgtagcctg
     8401 aaagatactg ataataagcc ccgcgataag ccccgctaaa agcatgggca aagaaagcaa
     8461 aagtgtgatt ttaaaggttt gcactccaag agcaaccaag gtgctttcat ccattttaat
     8521 cctttttaag aatttctaaa ttcttcatac tcgctcggga taagataatc cttagcatgt
     8581 atgattttat cataaaattt ataatcatat cccagtttaa aaagcacatc cactgcttta
     8641 aattgcgttt cgctcatgca aatggagttt ttattggcat ataaattcaa ataagtatca
     8701 agtttttcct cattaacgcg gattaaattt ctttccatta gcataggggc caaaatgcgg
     8761 cgattagaat ttgctatttt tacagcattt gtaagatctc tttctatctt gatagcatcg
     8821 ctaagcggca aagagcgacg caaagccatt ccacccaaag gtagaggtaa attttcttgt
     8881 gcaagttcta gccatatatt ccaaatttca gcttccacac aaagactact gtcaaattct
     8941 aaaatgcttt catggattaa aacccctgca tccacttcgc cgcttaaaac tgcattttca
     9001 atttctaaga aatttttata aatgattcta gcttctggat atttcatacg aaaaattaga
     9061 gcgttggtag tgtttgcgcc acttaatgca actttaaaat ttctttttaa atgtgtattt
     9121 tgttttttga taagttttgg cccataaccc tcaccaaaac ttactgcggt gcgcaaaaga
     9181 gcgtattctt tagtaattaa aggataaagt ccaaacgaga tcgctgtagc atcaaattca
     9241 ttttttaagg ctaaatcatt taaagtttgt atatctaaag ccgtattttt atagtcaaaa
     9301 tcattcccta tccatcctag tttaattgcc atatacataa aaatatcatc cgcatcgggt
     9361 gaatgtgcga ttgtaattgt ttttttcata gctttcctaa tttttaatga aataattttt
     9421 attctatcaa aataaactat tatttaattt tattttgtta aaattctagc taaaaatttg
     9481 caatttttaa ggaaaataat ggacgataat aagaaaaaat cgcttgatgc cgccttaaaa
     9541 tcgctcgata aagcttttgg caagggcact attttaaggc ttggagataa ggaagtagag
     9601 cagattgata gcataggaac aggttctgta ggacttgatc ttgcacttgg tataggcgga
     9661 attccaaaag gaagaattat tgaaatttat gggcctgaaa gttcaggtaa aacaacttta
     9721 actttgcata ttatagcaga gtgtcaaaaa gcgggtgggg tttgtgcctt tatcgatgct
     9781 gagcatgctt tggatgtaaa atatgctaaa aatttgggcg tagatacaga taatctttat
     9841 atttctcaac ccgattttgg tgagcaggct ttagagatcg ttgaaaccat agcacgaagt
     9901 ggggctatag atttgatagt tgtagatagc gttgcagcac ttactccaaa agctgaaatc
     9961 gaaggcgata tgggagatca gcatgtaggg cttcaagcaa gacttatgtc tcaagcatta
    10021 agaaagctta caggaattgt ccataaaatg aatacaaccg tgatttttat caaccaaatt
    10081 cgtatgaaaa ttggcgctat gggttatgga actcctgaaa caacaacagg aggaaatgca
    10141 ctcaaatttt atgcttcagt gcgtttagat gttagaaaag tagcgacttt aaaacaaaat
    10201 gaagagccta ttggtaaccg tgttaaagtt aaagtagtaa aaaataaagt agcacctcca
    10261 tttagacaag ctgaatttga tgtaatgttt ggagagggtt taagccgtga gggtgaattg
    10321 atcgattatg gtgtaaaact tgatatagta gataaaagtg gtgcttggtt ttcttataaa
    10381 gataaaaaat tgggtcaagg tagagaaaat tcaaaagctt tcttaaaaga aaatccagaa
    10441 atagctgatg aaattaccaa agaaattcaa aattctatgg gtatagaagg catgattagc
    10501 agtagcgaag atgaagaagg agaagaataa tgttagtaat tgaagatgtt agggcatatg
    10561 aagtgcttga tagtagagga aatccaactg taaaagcaga agttgtactt agtgatggga
    10621 gtatgggtgc agctatagtt ccaagtggtg caagtacagg ttctaaggag gctttagaac
    10681 ttcgtgataa tgatgaaaga tttggtggaa agggtgtttt aaaagcagtt tctaatgtaa
    10741 atgaaactat agctgatgaa attttaggac ttgatgcttt aaatcaagct cagcttgatg
    10801 atactttgcg tgagcttgat ggtacaaata attactcaaa attaggcgca aatgcgacct
    10861 tgggagtatc tatggcaaca gcgcgtgcgg cggcaaatgc tttaggagtg cctttgtatc
    10921 gttatttagg gggtgcaaat gcgagtattt tgcctgtgcc aatgtgcaac atcatcaatg
    10981 gtggcgccca cgcaagcaat aatatagact ttcaagaatt tatgatcatg ccttttggtt
    11041 ttacaagctt taaagaagct ttgcgttcag tttgtgaaat ttatgcgatc ttaaaaaaag
    11101 agcttgcaaa tttaggacat tctacagctt tgggcgatga aggaggcttt gctccaaatt
    11161 tggctaacaa tacagagcct attgatcttt taatgacttg tattaaaaaa gcaggttatg
    11221 aaaatcgtgt taaaatcgct cttgatgtgg caagtactga attttttaaa gaaggtaaat
    11281 accacatgga gggcaaagct ttttcaagtg aagacttaat tgaacgctat gtggagcttt
    11341 gcgcaaaata tccaatttgc agcattgaag atggtttagc tgaaaatgat tttgagggct
    11401 ggatcaagct tactgaaaaa ttaggcaata aaattcagct tgtgggcgat gatttatttg
    11461 taacaaatga agatatctta agagaaggca ttatcaaaaa aatggcaaat gctgtgctta
    11521 ttaaaccaaa tcaaatcgga actattactc aaactatgag aactgttcgt ttagcacaaa
    11581 gaaacaatta taagtgtgtg atgagccata gaagtggcga gagtgaagat gttttcatag
    11641 cagattttgc tgtagcttta aatacaggac aaatcaaaac aggggctttg gcaagaggcg
    11701 aaagaactgc aaaatacaat cgcttgcttg aaattgagct tgaaagtgat gaatatttag
    11761 gagaaaaact ctgagtgatt tactcaaaga atatgacgaa agcaccaaga aaaagagctt
    11821 ttatgcccat cttataaaga tggttttttg ggcttttctt gtcattatag gagctattta
    11881 ttttggaaat atgctttttg ggcagtattc tttagatacc ttgctttcac ttgaagcaac
    11941 caaagaagaa ttgaataaaa aaatatcttt tctcaaagag caaaacgcca aagcacaaaa
    12001 agattatttt gaattacaag gattataccc caatgaaaac taaaatttta ggaatatttt
    12061 taatttttat ttctttatta aatgctgagg aaaatccttt caaatcagag caaaacatga
    12121 gtatgattat gccacctgat tttcaaaaag aggatattaa atttaattct aatgcaagag
    12181 ttttaaaaag cgtaagtttt aattatatta atcttgatgg aagtgaagaa gtattaaatg
    12241 ttgatattaa taaaagcata gattggcacg atacttatac tcttgtccgt actaagagcc
    12301 cagatccttc aaaagttttt gatgtttcag taactatacc tgaacgtaat gattctaaaa
    12361 aagaatccaa tggtacagca aatatagaaa taccgctaca agttgataaa atttatgatt
    12421 ttatatctta tgcagtgtat aaaaataaaa tcaaactcaa tactagtgat gagcttatta
    12481 gtgatttttc cataggtaat cctagtaaaa ttgtagtgga ttttaaatca gatctagtaa
    12541 atcctactaa aaacatacgc attagtaatt ctctttttaa gcgtatagat tttggctctc
    12601 ataaggggta ttatagactt gtgatatatt tggatggaaa ttataattac aatatccaaa
    12661 aagatgctac aggatatatg atcaatctat tgtgatgaga atttttgttt ttttatggtg
    12721 tgttagtttt gcttttgcta gcgatatttt acttttaagc aagataagtg aacaagaaat
    12781 tcaaaataag aattttaatg gctatttaat gagtgaaaag cttgatggag tcagaggaat
    12841 ttgggaagtg ggaaaattta aaacccgcca agataatcca atttatactc cttcttattt
    12901 tacttataat tttcctagct ttaagcttga tggggagctt tggatagcta gggctaaatt
    12961 tgatgaggtg tcagctttaa ttcgtggcga taatctagac tcaagccttt ggaaaagtgt
    13021 tacttataat gtttttgatg tacccaatgc ttgtgaagaa tttaaactca cttcttgtac
    13081 tttaagcaac cgccttaagg ttttagagca gtatttgcaa caaaatccca atccttatat
    13141 aaaaatcata aagcaaattc ctataaaaga tcaagagcat ttaaaagaat tttataaaga
    13201 tattgtctta aataagggcg aaggtgtagt tatacgcaag gatcttgctc cttatgaaaa
    13261 aggcagaagt aaaaacgctt ttaaattaaa accttatgaa gatgctgaat gtaaagtcat
    13321 aggttatact gaaggtaagg gtaaattcca aggtaaaatc ggcgctttac tctgtcaaat
    13381 gccaaatgat agggtgatta gaataggcag tggtttaaaa gataaagata gggaaaatcc
    13441 acctaaaata ggctctattg ttacttataa atttaatggg ttgactaaaa attccttacc
    13501 gcgttttcca gtttttttac gcataaggga ttaaaattct tgactttgtt ttctttttct
    13561 gatataatac ctactttttt cggggtgtag cgcagtctgg ttagcgcact tggtttggga
    13621 ccaaggggcc gaaggttcga atcctttcac cccgaccatt ttttataaat ttatacaaaa
    13681 tggtgagtgt agctcagtcg gttagagcat cagattgtgg tcctgagggt cgtgggttca
    13741 attcccatca ctcaccccac taagcgttcg tagctcaact ggatagagca acagacttcg
    13801 gatctgtagg ttatgggttc aattcctatc gggcgcacca ccaaattttt atatgcgttc
    13861 atagctcagc tggatagagc aacggccttc taagccgtag gtcagaggtt cgaatcctct
    13921 tgagcgtacc atactagcgg atgtggtgaa attggcagac acgccagact taggatctgg
    13981 tgcagcaatg cgtgaaggtt caagtccttt catccgcacc accatgcttt gaagctactt
    14041 tttaaaattt ttaaaaaact tagggagcgg tt
//
LOCUS       DAQUWA010000046        13979 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.046, whole genome shotgun sequence.
ACCESSION   DAQUWA010000046 DAQUWA010000000
VERSION     DAQUWA010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13979
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.046"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(51..126)
                     /locus_tag="R8X70_001243"
     tRNA            complement(51..126)
                     /locus_tag="R8X70_001243"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(91..93),aa:Phe,seq:gaa)
     gene            267..1610
                     /locus_tag="R8X70_001244"
     CDS             267..1610
                     /locus_tag="R8X70_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HEF2929018.1"
                     /translation="MKQFGLDRRTFKILLAGYIVIALLGAILLHSSWAHTSPISFIDA
                     FFTSTSAVSMTGLIVKNTAVDFTLAGQIIILILVQIGGLGYMSIGLFVYLIIRKKVGF
                     NGRNLLKESLFYPSMEGLFKFFKKVLLFIFTIELIGTILLTMRFALEMNFGKALWFGF
                     FHSISAFNNSGFTIFENGLLAYKHDVAINLIFTSLIIIGGLGYFVLVELYFFQRKRLQ
                     NLSLHTKVVIMATLFLIISSTLIIFLLEYANPKSIGSFSLFDKILSSYFIAINYRTAG
                     FNTLDMSGLHDASLFFGSLFMVIGGAPGGTAGGMKITTVVVLLFYAYWSIRNGRVRIF
                     NHEIPQEIISRAFIIAVGSAVYIVIAVIFLSLLESEFNFIHLLFETSSAFATVGISVG
                     DGGDLSLCALFSNPSKIIIIIMMLSGRIGVFAFLLSVFQQDKAIHIKFPKGKIYL"
     gene            1623..2273
                     /locus_tag="R8X70_001245"
     CDS             1623..2273
                     /locus_tag="R8X70_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEF2929019.1"
                     /translation="MKKLSYGVIGLGKFGSVVADELLAGGHTVIIADKDEEALKSIQN
                     SPSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVNNIIAKAT
                     SNIHGQILSKLGATKVIYPEKESAKKLVKDFLTKDADYEVFDLSANTIRAIKITIDDK
                     LAGNSLKHIAQNMRVISYKKLNTDWEILPDLETTTVYGGDVVILLGTVKELREFEH"
     gene            complement(2274..2945)
                     /locus_tag="R8X70_001246"
     CDS             complement(2274..2945)
                     /locus_tag="R8X70_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthetic enzyme MqnA/MqnD family
                     protein"
                     /protein_id="HEF2929020.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGFKASMEHKKGVPSKLNKD
                     LFYRRIDAAIVSSIESARKKYKNLDLGICANKRVLSVLVEKNTPNAKDPSSATSNALA
                     KVLKQEGRVIIGDKALKLYLQDPSRYTDLCTKWHEKTGLPFVFARFSCVQKKALYKQI
                     LKKFPKTKIKIPYYILQNYAKTRDLDIKDIRYYLDEIIYHKISTKEKAALKRFIKACK
                     ALNLT"
     gene            complement(2951..3577)
                     /gene="upp"
                     /locus_tag="R8X70_001247"
     CDS             complement(2951..3577)
                     /gene="upp"
                     /locus_tag="R8X70_001247"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEF2929021.1"
                     /translation="MKNIHHICHPLIEHKLGFLRDKETKPFHFRMLIDEISTFLLFEA
                     TKDLCLKETQIQTPVANAKVKRLDEKIMICPILRAALGMLDSIFRLIPDASVGFLGFV
                     RNEETLKADFYFQKLPKDAKKRTAIVIDPMFATGGTAIEACNFLKSQGVKKIKFISIL
                     AALQGLQKFSQMHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
     gene            complement(3574..4809)
                     /locus_tag="R8X70_001248"
     CDS             complement(3574..4809)
                     /locus_tag="R8X70_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEF2929022.1"
                     /translation="MNLKEEALRYHLGGKIDIKPSKPMNSSHDLSLAYSPGVAEPCIE
                     IASNNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFADVNAY
                     DLEIEAHSIEEIVAFCKAIAPTFGGINLEDISAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLMNAMEISGKKFEEIKVVVSGAGAAGIASARMYRNLGVKNIILVDSKGVVN
                     KKRTDLNQYKLEFVSDTQADTLKEAMKDADVFLGLSAPKILDDEMILSMAKDPVIFAL
                     ANPIPEVMPEDVARLRKDAIVGTGRSDYPNQINNVLGFPFIFRGALDVRATKITENMK
                     VAAAKALADLAKLPVSDAVKNAYKISHLEFGKDYVIPKPFDERVKAVVSTAVAAAAVK
                     DGVALLKEFDEKTYFESLK"
     gene            complement(4809..6200)
                     /locus_tag="R8X70_001249"
     CDS             complement(4809..6200)
                     /locus_tag="R8X70_001249"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEF2929023.1"
                     /translation="MTGKLTTRFAPSPTGYLHIGGLRTALYSYLYARKNKGNFLLRIE
                     DTDLKRNSKEATQAIIEAFKWCGLDYDGEVTYQSERFDLYKKYIQKLLDEGKAYYCYM
                     SKEELDELRAKQEAAKERPRYDGRYRDFTGTPPSNIEPVVRIKAPQKGEICFIDGVKG
                     EVKFKVEDILDDFIIARSDGSPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYE
                     ALGFEIPKFYHVAMIHGEDGKKLSKRHGATDVMEYKAMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKRLFDPNHINKSASCYNFKKLEWLNAHYIKTLPFEEINRQLKDLGFDLS
                     VYTKAGFLLDLLRERAKTLLEIISGAKSIVEAPQNYDENAINKFINENNLLLLQNYAN
                     ELNEEKSAKDFEEFTNEFLQKNEVKLKDLAQPIRIALTGSAVSPSIFEVLEFLGVNEC
                     KKRIKKFLDFKGK"
     gene            6265..7080
                     /locus_tag="R8X70_001250"
     CDS             6265..7080
                     /locus_tag="R8X70_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929024.1"
                     /translation="MKKILLSFVFFISLTHANTINAIAVVVDKEPITTYDIEQTMKTL
                     NIPKNQALGILINEKMELSQIKQFGIYTSELELDNAIGKMLAQNKISLEDFKRDLQAK
                     GQNYEQFRSNFKKDFEKRKLYEKIASTAKTDFSDEGAKKFFEQNKNKFTLFTEINVNI
                     YRSNNAQDLENIKATTKTALKAEKATLTPNNSDPRLLGLLSSIPIGSFSPVLNSQKGY
                     EIYQVKDKNGGQTPEYYQIKNEILNAYVSEQRQNYIQDYFDKLRSKINIEYLR"
     gene            complement(7108..8439)
                     /locus_tag="R8X70_001251"
     CDS             complement(7108..8439)
                     /locus_tag="R8X70_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEF2929025.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIISAAEIAEADAIFPGYGFLSENQTFVEICAKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVEHEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQIIGDS
                     FGNVIHIGERDCSMQRRHQKLIEESPAILLDEKTRARLHETAVKAAKAISYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPSQENVKLKGHS
                     IECRITAEDPKTFLPSPGKIIKYVPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWA
                     EDRNKAISKMKVALDELIIGGIKTTKDFHLAMMDNPDFISNNYDTNYLARH"
     gene            complement(8441..8896)
                     /gene="accB"
                     /locus_tag="R8X70_001252"
     CDS             complement(8441..8896)
                     /gene="accB"
                     /locus_tag="R8X70_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEF2929026.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     LACPPVPAPQPINVNVVNEAQPSSAKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSSV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIVEILVADGQPVEFGMPLFTVEKL"
     gene            9055..9615
                     /locus_tag="R8X70_001253"
     CDS             9055..9615
                     /locus_tag="R8X70_001253"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEF2929027.1"
                     /translation="MGLKADNWIRKMALEHQMIEPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFLEENVVDFEGDVCIVPANSFALARTIEYFKMPDDVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            9669..10673
                     /gene="pseB"
                     /locus_tag="R8X70_001254"
     CDS             9669..10673
                     /gene="pseB"
                     /locus_tag="R8X70_001254"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HEF2929028.1"
                     /translation="MFNGKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQF
                     EMASVFNAPCMRYFIGDVRDKERLSVAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFENGVKKCIALSTDKACNPVNLYGATKLASDKLFVAANNIAGNKQTRF
                     GVTRYGNVVGSRGSVVPFFKKLISEGAKELPITDTRMTRFWISLEDGVKFVLSNFERM
                     HGGEIFIPKIPSMKITDLAHALAPNLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKFVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            10675..11805
                     /gene="pseC"
                     /locus_tag="R8X70_001255"
     CDS             10675..11805
                     /gene="pseC"
                     /locus_tag="R8X70_001255"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HEF2929029.1"
                     /translation="MLTYSHQNIDQSDIDTLTEALKDEILTGGKKVDEFEEALCEYVG
                     VKHACVLNSATSALHLAYTALGIKEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDG
                     NIDEKKLEARLLKNSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELITKIKLLRSHGIIKKRLWDS
                     DMVELGYNYRLSDVACALGINQLKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHAGIGVQVHYKPTYEFSFYKKLLGEIKLQN
                     ADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG"
     gene            11798..13104
                     /locus_tag="R8X70_001256"
                     /pseudo
     CDS             11798..13104
                     /locus_tag="R8X70_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876743.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
     gene            complement(13094..13975)
                     /locus_tag="R8X70_001257"
     CDS             complement(13094..13975)
                     /locus_tag="R8X70_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEF2929030.1"
                     /translation="MFDHIEKSNPIHAKYLKKVNLNEEEKVELENLIRFYLNQGFSIN
                     KQANAYLLFLNDTLKEIYYFIEHGTYRYSTLKDVEDKIYFNHDYMENYMIGLAISNFI
                     WDTHIAIRRYFIDLMQNNNIFGKYLEIGPGHGNFFLQSLKFGQFSELLGVDISPTSCE
                     MTKKIVSFNDHKAKQKCQFICMDFLEYDFNEQFDFITIGEVLEHVENPKNFLNKARKI
                     LSDDGNIFITVPINGPAVDHIYLFSHPDEVKNMIKNCELEIVKEEYFMANNYSLKKAL
                     ETRNAIIMVALLKKIIK"
BASE COUNT         4689 a         2456 c         2156 g         4678 t
ORIGIN      
        1 gaagaactta gtgaagaaat taaagtcatt tttaataaaa aataaaatga tggtggttag
       61 aggcagaatc gaactgccga cacgcagatt ttcagtctgc tgctctaccg actgagctat
      121 ccaaccgagt catctttaaa aataaagtgt aattatactt ttttttcttt aatttaagtt
      181 taaatataaa aataaaattt tatttgcctt aaagttttaa tccgatagaa tagtcggttt
      241 aaaattaaaa accaatgagg atttttttga aacaatttgg cttagacaga cgaactttta
      301 aaattttgct agcaggatat attgtcattg ctttacttgg cgctattctt ttgcattcaa
      361 gttgggctca tacaagtcct attagtttta tcgatgcttt ttttactagt acttcagctg
      421 tgagtatgac tggacttatt gttaaaaata cagcagttga ttttaccttg gcaggacaaa
      481 ttattatttt aattttagtt caaattggcg gcttaggtta tatgagtata gggctttttg
      541 tttacttgat tatacgcaaa aaagtaggtt ttaatggtag aaacttactt aaagaatctt
      601 tattttatcc ttccatggaa ggacttttta aattctttaa aaaagtttta ctatttattt
      661 ttacaataga acttataggc actatacttc ttaccatgcg ttttgcgctt gagatgaatt
      721 ttggtaaagc cttatggttt ggattttttc attcaatcag tgcttttaat aattcaggtt
      781 ttactatttt tgaaaatgga cttcttgcct ataagcacga tgtagctatt aatctcatct
      841 ttacttctct tattatcatt ggtggacttg gatattttgt cttagttgaa ttgtattttt
      901 ttcaaagaaa aagactgcaa aatttaagcc tacataccaa agtcgttatt atggcaaccc
      961 tttttcttat catttcttca acacttatta tctttctttt agagtatgct aacccaaaat
     1021 ccataggtag cttttctctt tttgataaaa ttttgagttc ttattttatt gcgatcaatt
     1081 accgcacagc aggatttaat acactcgata tgagtggctt gcatgatgca agcttatttt
     1141 ttggctcttt atttatggtg attggaggag caccgggtgg aacagcaggg ggaatgaaaa
     1201 tcacaactgt tgtggtgctt ttgttttatg cttactggag cattcgcaat ggaagggtaa
     1261 gaattttcaa ccacgaaatt ccacaagaga tcatttcaag agcatttatt atagcagtgg
     1321 gttcggctgt ttatatagtt atagcggtta ttttcctttc tttgctagaa tcagaattta
     1381 attttatcca tctgcttttt gaaacctcat cagcatttgc aacagtggga atttcggtag
     1441 gagatggggg agatctttcg ctttgtgctt tatttagcaa tccaagcaaa attattatta
     1501 ttattatgat gttaagcgga aggattggtg tttttgcgtt tttactttct gtatttcagc
     1561 aagataaagc gatacatatc aaatttccta aaggaaaaat ctatttataa aggttaaata
     1621 taatgaaaaa gcttagttac ggggttatag gacttggaaa atttggatcc gtagtcgcag
     1681 atgagcttct tgctggagga catactgtaa tcatagccga taaagatgaa gaagctttaa
     1741 aaagtataca aaattcacca agctatgcct atatcttgga ttctaccaat atttcagcac
     1801 ttaaagaagc gggttttcat gatgtagaag tcgtgattgt aagcataggt gaaaatgttg
     1861 aaaaatccat acttactcta atggctctta aagatatagg agtaaataat attatcgcaa
     1921 aagccacttc taacattcat gggcaaattt tatccaaact tggagctaca aaagtaatct
     1981 atcctgaaaa agaaagtgct aaaaagcttg taaaagattt tttaaccaaa gatgcagatt
     2041 atgaggtttt tgatctatcg gctaatacta tccgtgctat taaaatcact atagatgaca
     2101 aattagcagg aaattcatta aagcacattg cacaaaatat gagagttatt agctataaaa
     2161 aacttaatac agactgggaa atattgcctg atttagaaac aactactgtt tatggtggtg
     2221 atgttgtaat cttacttgga acggttaaag agcttagaga atttgagcat taattaagta
     2281 agatttaaag ccttgcaagc ctttataaaa cgctttaagg ctgctttttc tttggtggaa
     2341 attttatgat atatgatttc atctaaataa tatctaatat cttttatatc taaatccctt
     2401 gttttagcat aattttggag tatataataa ggaattttaa tctttgtttt tggaaatttt
     2461 tttaagattt gtttatataa agcttttttt tgcacacatg aaaacctagc aaaaacaaaa
     2521 ggcaggcctg ttttttcatg ccattttgtg cacaaatcag tatacctaga aggatcttgt
     2581 aaataaagtt ttaaagcctt atcacctata atcaccctcc cctcttgttt taaaacctta
     2641 gctaaagcat tagaagttgc cgagcttgga tctttagcat tgggtgtatt tttttctact
     2701 aaaacactta aaactctttt attggcacaa atacccaaat ctaaattttt atattttttt
     2761 ctagcgcttt ctatacttga aacaatagct gcatcaattc ttctataaaa taaatcttta
     2821 tttagcttac ttggaactcc ttttttatgc tccatacttg ctttaaaacc attaggtaaa
     2881 ggatatttct taagatatat atgcaaaggt aaaagattaa tataatcaat ttttccaaaa
     2941 atcatctctt ttaaagagtg ttaaacactc tatctcctgc atctccaagc cctgggataa
     3001 tataaccttt ttcatttaaa ccttcatcaa tacaagccac aaaaacttct acatcatcat
     3061 gcatttggct aaatttttgc aaaccttgta aagcagcaag tatggatata aattttattt
     3121 ttttaactcc ttggcttttt aaaaaattac aagcctctat agcagtccca cctgtagcaa
     3181 acataggatc tataacaata gcggtgcgtt tttttgcatc tttaggaagt ttttgaaaat
     3241 aaaaatccgc ctttaaagtc tcttcatttc tcacaaaccc caaaaatcca acacttgcat
     3301 caggaataag tctaaaaata ctatcaagca tacccaaagc tgcccttaaa atagggcata
     3361 tcataatctt ttcatctaat ctttttacct tagcattagc aacaggggtt tgaatttgtg
     3421 tttcttttaa acataaatct ttagtcgctt caaaaagcaa gaaagtagaa atctcatcaa
     3481 tgagcatcct aaaatggaaa ggtttagttt ctttatcgcg caaaaaccct aatttatgct
     3541 ctatcaaagg atggcatatg tgatgaatat ttttcatttt aaactctcaa aatatgtttt
     3601 ctcatcaaat tccttaagca aagctacccc atcttttaca gccgcagcag ctaccgcagt
     3661 acttacaaca gccttaaccc tctcatcaaa aggttttggg ataacataat cctttccaaa
     3721 ttctaaatgg cttatcttat aagcattttt aaccgcatca cttacaggta attttgccaa
     3781 atctgctaaa gcttttgctg cagctacttt catattttca gtaatttttg tcgcacgcac
     3841 atctaaagcc ccacgaaaaa taaaaggaaa gcctaaaaca ttattgattt gattaggata
     3901 atcacttctt cccgttccta caatagcatc ttttctaagc cttgccacat cttcaggcat
     3961 cacctctgga ataggatttg ccaaggcaaa gataacagga tcttttgcca tagacaaaat
     4021 catctcatca tctagtatct ttggtgcact aagccccaag aatacatccg catctttcat
     4081 agcctctttt aaagtatctg cttgcgtatc gcttacaaat tcaagcttgt attgatttaa
     4141 gtctgttctt tttttattga ccacaccctt actatctaca agaatgatat ttttaacacc
     4201 taaatttcta tacattctag cactagcaat acccgcagct cctgctccac ttacaacaac
     4261 tttaatctct tcaaattttt taccacttat ctccatagca ttcataagcc ctgcggttga
     4321 gataatagcg gttccatgct gatcatcgtg cattacagga attcctaaat cctgcaaagc
     4381 cgcttcgatt tcaaaacatt taggtgctga aatatcttct aaattgattc cgccaaaagt
     4441 aggtgctatg gctttacaaa aagcaacaat ttcttcaatg ctgtgtgctt cgatttctaa
     4501 atcatacgca tttacatcag caaatttttt aaacaagcaa gccttacctt ccataaccgg
     4561 tttagaagct tgcgcgccga tatttccaag acctaaaacc gcagaaccat cactaacgat
     4621 agctactaaa ttcgctttgt ttgtataagt ataagcaagc tcattattag aagcaatttc
     4681 aatgcaaggt tctgcaacac ctgggctata agccaaagat aaatcatgac ttgaattcat
     4741 aggttttgat ggctttatat ctatcttgcc tcctaagtga tatcttaaag cctcttcttt
     4801 taaattcatt attttccttt aaaatctaaa aattttttta ttcttttttt acattcattg
     4861 acccctaaaa actctaaaac ttcaaaaatg ctaggactaa ccgcacttcc tgttagagct
     4921 atgcgtatag gttgagccaa atcttttaat tttacctcat ttttttgtaa gaattcgtta
     4981 gtaaattctt caaaatcttt tgcacttttc tcttcattta actcatttgc atagttttga
     5041 agcaataaaa gattgttttc gtttataaat ttatttatag cattttcatc ataattttgt
     5101 ggcgcttcaa cgatactttt agctccgcta ataatttcaa gtaaagtttt tgcgcgctct
     5161 cttaataaat cgagtaaaaa tcctgctttt gtataaacgc ttagatcaaa accaagatct
     5221 tttaactgac gattgatttc ttcaaaaggc aaagtcttga tataatgagc attgagccat
     5281 tcaagttttt taaaattata acaagaagca cttttgttga tatgattagg atcaaaaagc
     5341 cttttaagat cttctaaaga aaaaacctca tcatcgccat ggctccatcc taaacgcact
     5401 aaaaaattta gcaaagcttg aggtaaaatt cccatagcct tgtattccat cacatcggtt
     5461 gctccgtgtc gttttgaaag ctttttacca tcttctccat gtatcatagc cacatggtaa
     5521 aatttaggaa tttcaaatcc taaagcctca taaagtacga tttgtttagg agtatttgaa
     5581 agatgatcat cccctctaat cacatcgctt actcccatta aagcatcatc aattacaact
     5641 gtaaaattat aagtaggact tccatcactt cttgctatga taaaatcatc taaaatatct
     5701 tctactttaa atttcacttc ccctttaaca ccatctataa agcaaatttc acccttttga
     5761 ggagctttta tacgcaccac gggttctata tttgatggtg gagttcctgt aaaatccctg
     5821 tatctgccat catatcttgg gcgttctttg gccgcttctt gtttagcacg gagttcgtca
     5881 agctcttctt tactcatata acaataataa gccttgccct catccaaaag tttttgtatg
     5941 tattttttat aaagatcaaa gcgttcagac tggtaagtta cctcaccatc ataatccaaa
     6001 ccacaccatt taaaggcttc tatgatagct tgcgtagctt ctttggaatt tctttttaaa
     6061 tccgtatctt ctatacgaag taaaaaattg cccttatttt ttcttgcata caaataacta
     6121 taaagagcgg ttcttaaacc acctatatgc aaatatcctg tagggcttgg agcgaaacga
     6181 gtcgtaagtt ttcctgtcat tttttgcctt ttcttaaatt ttaattgata taatgcgata
     6241 tttacactta aataaaggtt tgaaatgaaa aaaattttac taagttttgt attttttata
     6301 agcttaactc atgcaaatac tataaatgct attgctgtag tggtagataa agagcctatc
     6361 acaacctatg atatagaaca aaccatgaaa accctaaata tacctaaaaa tcaagccttg
     6421 gggattttga ttaatgaaaa aatggagctt tcacaaataa aacaatttgg aatttatacg
     6481 agtgagcttg agcttgataa tgccattggt aaaatgctag cacaaaataa aatttcactt
     6541 gaagacttta aaagagattt acaagctaag gggcaaaatt acgaacaatt tcgtagcaat
     6601 tttaaaaaag attttgaaaa aagaaaactt tatgaaaaaa ttgccagcac agctaaaacc
     6661 gattttagcg atgagggagc taaaaaattt ttcgaacaaa ataaaaataa atttacactc
     6721 tttaccgaaa ttaatgtaaa tatctatcgt tctaacaatg cacaagattt agaaaatata
     6781 aaagctacca caaaaactgc acttaaagca gaaaaagcca ccctcactcc taataattca
     6841 gatccaagac ttttaggact tttatcatct atacccatag gaagcttttc tccggtttta
     6901 aattcgcaaa aaggttatga aatttatcaa gtaaaggata aaaacggagg acaaactcca
     6961 gaatattatc aaattaaaaa tgaaatactc aatgcttatg taagcgagca aagacaaaat
     7021 tatatacaag attatttcga taaattacgc tcaaaaatca atatagagta tttaagataa
     7081 aatcaagatg gaaaaaatcc atcttgatta atgtctagca agatagttgg tatcgtaatt
     7141 attactaata aaatcaggat tatccatcat tgcaagatga aaatctttag tagttttaat
     7201 cccacctata atcagctcat ccaaagctac tttcattttt gaaatggctt tgttgcgatc
     7261 ttctgcccaa accacaagtt ttcctatcat agaatcataa tacggcggca cgctgtagtc
     7321 ttgataacaa tggctttcca ttctaacatt gcgccctgca ggtggaacat acttgataat
     7381 cttacctgga cttggcaaga aagtcttagg atcttcagca gtgattctac attctataga
     7441 atgtcctttt aacttcacat tttcttgaga aggtaaagca taaccttcag ctactttgat
     7501 catttgttca atgatatcaa tcccgctcac catttcgctc acacaatgct caacttgcaa
     7561 acgcgtattc atctctataa aataaaaatc taaattttta tctactaaaa attcaaaagt
     7621 ccctgcaccc tcatagctta tagctttagc agcttttact gctgtttcgt gaagtcttgc
     7681 gcgagttttt tcatcgagta aaattgctgg agattcttct ataagttttt ggtggcgtct
     7741 ttgcatagag caatccctct caccaatatg gatcacattt ccaaaactat ctccgatgat
     7801 ttgaacttct atatggcgtg gattttgtat gtatttttcc atatacatag tcccatcgcc
     7861 aaaagctgtc atcgcttcac tttcagctga ccaatatgct ttttcaaggt ctttttcatg
     7921 ctctactaca cgcattccac gacctccgcc tccagctgct gcttttaaaa tcacaggata
     7981 accgatctct ttagcaagtt ttttagccgc ttcagcaccc gctaaagctc catcacttcc
     8041 tggtataaca ggaactcctg ctctttgcat aacttgctta gcttttgatt tatcactcat
     8101 caaattcata gcttcaaccg aaggccctat aaatttgata ttgtgtttag cacaaatttc
     8161 aacaaaagtt tgattttcac ttaaaaatcc ataacctgga aaaatcgcat ccgcttctgc
     8221 aatttcagct gctgaaataa tagcaggtat attaagataa ctttcagaac ttcttgcttt
     8281 tcctatacaa atacttgcat ctgcatattt taaatacaaa gcatctttat ctgcttcaga
     8341 ataaacgcaa attgcttttt ttcccatttc tttaattgtt cttaaagctc gaagtgctat
     8401 ttctccacga ttagcaatta aaatgctttt aatttccatt ttataatttc tccaccgtaa
     8461 ataaaggcat accaaattct acaggctgac catctgcaac taaaatttct actattctac
     8521 aatcaaattc agcttcaatt tcattcatga ttttcatcgc ttcgatgata gcaatagtat
     8581 cgcctttttt aaccgaactg cccactttta caaaaggagc tgcacctggg cttggagctt
     8641 gataaaaagt tcctaccata gggctgttta tacttggttt atttgatttt gcacttgaag
     8701 gctgtgcttc attaactaca ttaacattaa taggctgtgg agctggaaca ggtgggcaag
     8761 ccaaaggagc tggaacatca caacacatat ctctttcaag ttcgatttca aatccatctt
     8821 gctctttgat ttttatttta ctgatattag cctcggcaaa caaatttact aattctttaa
     8881 tctcttcttt tgtcatattt tcatctcctg attttaagaa cttaatctgg tattatatta
     8941 aaaaacttga aatttaactt taaaaaataa aatttcacgc ttaaaagttt cataaaatat
     9001 aaaaaataag ctataatcca aaaaaaatta tgtttaaaaa taaaggtata ttaaatgggt
     9061 ttaaaagcag acaattggat aagaaaaatg gcactcgagc atcaaatgat agagcctttt
     9121 tgcgaagcaa atataggaaa aggcgtagta agctacggac tttcaagcta tggttatgat
     9181 atacgcgtgg ggcgcgaatt taagattttt accaatgtaa attctaccgt agtggatcca
     9241 aaaaattttt tagaagaaaa tgtggtggat tttgaaggtg atgtatgtat agttcctgca
     9301 aattcttttg cacttgctag aactatagaa tattttaaaa tgcctgatga tgtcttggct
     9361 atttgtcttg gaaaaagcac ctatgcaaga tgtggtatca tcgtaaatgt aactcctttt
     9421 gaaccaggct ttgaagggca tataaccata gaaatttcaa ataccactcc cttgcctgca
     9481 aaaatttatg ctaatgaggg cattgcacaa gtattattct tacaaggtga tgaaaaatgt
     9541 gatacaacct ataaggataa aaaaggcaaa tatcaagctc aaactggcat aaccctgcca
     9601 agaattttaa aataggaacg cttattgctt taaactttta agcaataatt tggcaaagga
     9661 aagcgcaaat gtttaatgga aaaaatatct taattactgg tggtacaggc tcttttggaa
     9721 aaacctatac taaggtttta ttagaaaatt ataaacctaa taaaatcatc atttattctc
     9781 gtgatgagct caaacaattt gaaatggcaa gcgtttttaa tgctccttgt atgcgttatt
     9841 ttatagggga tgtaagagat aaagaacgct taagcgttgc tatgcgtgat gtggattttg
     9901 ttatacatgc tgctgcgatg aagcatgtgc ctattgctga atataaccct atggaatgta
     9961 taaaaacaaa catccacggc gcgcaaaatg tcatagatgc ttgttttgaa aatggggtta
    10021 aaaaatgtat tgctcttagt acggataagg cttgcaatcc tgtaaattta tacggtgcaa
    10081 ccaaacttgc aagcgataag ctttttgtcg ctgcaaacaa catagcaggt aacaagcaaa
    10141 cacgctttgg tgttacaaga tatggcaatg ttgtaggttc aagaggttca gtggtgcctt
    10201 tctttaaaaa actcatcagt gaaggagcta aagaacttcc tatcaccgat acgagaatga
    10261 ctcgtttttg gatcagcctt gaagatggag taaaatttgt actgagtaat tttgaaagaa
    10321 tgcacggagg agaaattttc atccctaaaa ttccttcgat gaaaatcacc gatctagccc
    10381 atgctctagc tcctaattta agccataaaa tcataggcat aagagcagga gaaaaactac
    10441 atgaaatcat gatttcaagc gatgatagcc atttaaccta tgaatttgaa aactactatg
    10501 ctataagccc gagtattaaa tttgtagata aagataatga ctttagtatc aatgccctag
    10561 gcgaaaaagg gcaaaaggta aaagatggtt tttcttatag ctcggataat aatcctttat
    10621 gggcaagcga aaaagaactt ttagaaatca tcaatcacac cgagggtttt taaaatgctt
    10681 acttattctc atcaaaacat cgatcaaagc gatatagata cgcttacaga agctttaaaa
    10741 gatgaaattt taacgggagg taaaaaggta gatgaatttg aagaagccct ttgcgaatat
    10801 gtgggcgtaa aacacgcttg tgtattaaac tcagccactt cagcccttca tcttgcctat
    10861 acagcactag gcatcaaaga aaaaatcgtt ttaaccactc ctttaacctt cgctgctacg
    10921 gctaatgcgg ctttaatagc tggagctaag gtagagttta tcgacattaa aaacgatggc
    10981 aatattgatg aaaaaaaact agaagcaaga cttttaaaaa atagtaaaaa tataggagct
    11041 attagcgtag tggattttgg gggaaatagc gttgaaatag atgaaatttc aagccttgct
    11101 aaaaaataca atatcccttt aatcgatgat gcaagccatg ctttaggtgc cttatataaa
    11161 agtgaaaaag taggaaaaaa agccgatctt tctatctttt cttttcatcc tgttaaaccc
    11221 atcactactt ttgaaggtgg ggctgtggtg agtgataatg aagagcttat caccaaaatc
    11281 aagcttttaa gaagccatgg cataattaaa aaaaggcttt gggatagcga tatggtagaa
    11341 cttggctata attaccgctt aagcgatgtt gcttgtgctt tagggataaa ccagcttaaa
    11401 aaactcgatc acaatcttga aaaaagagaa gaaatcgcaa gtttttacga taaagaattt
    11461 gaaaaaaatc cttatttttc cacgataaaa atcaaaaatt ataaaaaaag ctcgagacat
    11521 ttatatccta ttttgctttt tcctgaattt tattgtcaaa aagaagaact ttttgaaagc
    11581 ttacttcatg caggaattgg cgtgcaggta cattataaac caacttatga gtttagtttt
    11641 tataaaaaac tcttagggga aatcaaactc caaaatgcgg ataattttta caaagccgag
    11701 cttagcatac cttgtcatca agaaatgaat ctaaaagatg caaaatttgt aaaagatact
    11761 ttatttagca ttcttgaaaa agttaaaaag ggatattgtg gataagctag actttagaag
    11821 ccaagatttt agccaaactg gaaaggttat gtatgaacta gcttgtgaac tttttcccat
    11881 ccctagaagt atcacaggac aaggttttag agctagttta gaaattttaa ataaaactct
    11941 ggggggggga tactcaaatt tcactctata aaaagtggta caaaggtttt tgactggata
    12001 gtccctgatg aatggaacgc caaagaagcc tatattatca ctccagaagg agaaaaaatt
    12061 tgtgatttta aaaagcataa cttacacctt ctaaattata gcgaagctat cgatcaagaa
    12121 atcgaactag aagaacttca agatcatctt tactccatag aagaaatgcc cgatgctatt
    12181 ccttatgtaa cgagttatta caaaaggcgt tggggatttt gtctcacgca taatgaaaga
    12241 aaaaaactca aaaaaggcaa atacaaagtc tatatcgatg caaaacatga tgaaaatggg
    12301 gttttggatt atgctgattt tatcctacct agtacgcaaa actcaaaaga tgaaatttta
    12361 atttcaacct atctttgcca cccttccatg gcaaataatg agcttagtgg tcctgtggtg
    12421 gctattttcc tagcaaaatg gcttttaagt ttaaaaaaaa gaaggtataa ttaccgcttt
    12481 gtcatcattc ctgaaaccat aggctctata gtctatctta gcaaacattt agagtattta
    12541 aaaaaacatg ttaaagcagg ctttgtgctt tcttgcttag gcgatgatca tgcttactca
    12601 ctcatacaca cacccaaaga aaacactcta agcgataaag ttgccttgca tacgcttaaa
    12661 aataaagaaa atttcaaagc ttttagtttt ttagatcgtg gaagcgatga aagacaatac
    12721 aatgctccgc ttgtaaatct tggcattgta ggagtatgtc gcacaagata cctagaatac
    12781 gaacaatacc acaccagcaa agatgatctc aattttatct ctgaaaaagg tttaatgggt
    12841 ggacttcaaa gcatgcaaga aatgatttta aatctagaaa tcaacgccgt atataaaaac
    12901 accatagtat gcgagcccaa tcttggcaaa agaggactat atcataccct tagcactgcc
    12961 aatgacattc ctttagcttg taattttcta gcttactgtg atggagagaa tgatatcatc
    13021 gatatagcca atatcttaaa tatgcaagct tatgaattta aagaactttt ggaaaaaatt
    13081 ttagaatata aacttatttt ataatttttt ttaataaagc taccataatg attgcatttc
    13141 ttgtttctaa ggcttttttc aatgaataat tatttgccat aaaatattct tcttttacaa
    13201 tctccaactc gcaatttttg atcatatttt taacctcatc aggatgagaa aaaagataga
    13261 tatgatcaac agccggacca tttataggta cggtaataaa aatatttcca tcatctgata
    13321 aaattttgcg agccttattt aaaaaattct ttggattttc cacatgttct aaaacctctc
    13381 ctattgtaat aaaatcaaat tgctcattaa aatcatattc aagaaaatcc atacaaataa
    13441 attggcattt ttgttttgct ttatgatcat taaaactaac tatttttttt gtcatttcac
    13501 aacttgttgg agaaatatca actcctaata gttcactaaa ttgaccaaat tttaacgatt
    13561 gtaagaaaaa atttccatgc cctggtccaa tttcaagata tttgccaaaa atattattat
    13621 tctgcattag atcaataaaa tatcttctaa ttgcaatatg cgtatcccat ataaaatttg
    13681 atatcgcaag ccctatcata taattttcca tataatcatg attaaaataa attttatctt
    13741 caacatcttt taatgttgaa tatctataag ttccatgttc aataaaataa taaatttctt
    13801 ttaaagtatc attcagaaat aataaataag cattagcttg tttatttata ctaaaacctt
    13861 gatttaaata aaaacgaatc aaattttcaa gctctacttt ctcttcttca tttaaattta
    13921 ccttttttaa atatttcgca tgaataggat ttgatttttc aatatgatca aatatttgt
//
LOCUS       DAQUWA010000047        13883 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.047, whole genome shotgun sequence.
ACCESSION   DAQUWA010000047 DAQUWA010000000
VERSION     DAQUWA010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13883
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.047"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..248
                     /locus_tag="R8X70_001258"
     CDS             <1..248
                     /locus_tag="R8X70_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diacylglucosamine hydrolase like protein"
                     /protein_id="HEF2929031.1"
                     /translation="DEISFIEFWRFNSYFKNKWKNFEDFLKYPLKIEEEIKWRNKHFG
                     AYDLSPVIVLEKILPTRYEIIAKSEIYYDVKEVIKRT"
     gene            363..803
                     /gene="fabZ"
                     /locus_tag="R8X70_001259"
     CDS             363..803
                     /gene="fabZ"
                     /locus_tag="R8X70_001259"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEF2929032.1"
                     /translation="MIDVMKIQEILPHRYPFLLVDKITELKVGEVVRGYKNISISDHV
                     FMGHFPGHPIYPGVLILEGMAQTGGVLAFESMDAKVDPKSKVVYFTGIDGAKFRNPVR
                     PGDRLDYEMQVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
     gene            814..1605
                     /gene="lpxA"
                     /locus_tag="R8X70_001260"
     CDS             814..1605
                     /gene="lpxA"
                     /locus_tag="R8X70_001260"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEF2929033.1"
                     /translation="MKKIHPSAVIEDGAILGDDVVIEAYAYVSKEAKIGNGVVIKQGA
                     RILSDTTIGDHSRVFSYAIVGDIPQDISYKDEQKSGVIIGQNSTIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGDNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSKAFKFL
                     FRQGDLKENAQKLLENNESENVNKMCKFILETKRGIPVYRGKNNA"
     gene            1598..2821
                     /gene="clpX"
                     /locus_tag="R8X70_001261"
     CDS             1598..2821
                     /gene="clpX"
                     /locus_tag="R8X70_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEF2929034.1"
                     /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKHEHGVDFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKSELQD
                     DDVELFKSNILLIGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVERAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPKGGRKHPNQDFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDNEKENSKA
                     LLEKIEPDDLVHFGLIPELIGRLHVITSLNELNEDDMVRILTEPKNAIVKQYQKLFAI
                     DGVNLKFEDDALREIAKLALERKTGARGLRSIIEEIMVDLMFELPEYKNYDIVITKEV
                     VRDGAKALLIKKKIS"
     gene            2835..3875
                     /locus_tag="R8X70_001262"
     CDS             2835..3875
                     /locus_tag="R8X70_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEF2929035.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     ERYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGANLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVISKSIRTAGDKLDTSIVNYVKEKYNLIIGERTGEEI
                     KIAIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGLDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNEE"
     gene            3865..4614
                     /gene="mreC"
                     /locus_tag="R8X70_001263"
     CDS             3865..4614
                     /gene="mreC"
                     /locus_tag="R8X70_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEF2929036.1"
                     /translation="MKNKLIFVLVLFFLVFISFYYGGLVKKNVLLVNDTVLEKFYGIK
                     DAITEFFSKHFDQVDQIEQLKARNQELEYAAVLTTSFANQLNRILEDKNSTRYLPQVS
                     LVRVISYVKLNDYKRLWLDFAKVSPNKNKGLIHQGYTIGIAINKDGRAMALLQGDEQC
                     VFSVYIGKNKIPGLIQGEDDKLKVKFIPKWAKINIGDEILTSGLDNIFFSDVPVGIVS
                     AIKDEDMYQSVEVKPYANINIPAYLYIIDSL"
     gene            complement(4609..5589)
                     /locus_tag="R8X70_001264"
     CDS             complement(4609..5589)
                     /locus_tag="R8X70_001264"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929037.1"
                     /translation="MKKIYLYQKVTKIIFKSETMLNSKDRTQVILEKSGLSLSKFATI
                     LGKDRRTLAKFIENDTVKELDTKSKEKICEFFRYPFKIWESNENEFYTLLNQIENNEI
                     RIIDEGYIGGLKYIFENENEGSLILHPAFPNPAYRDFIVPLVYQNNDSEEARIYRIKR
                     GEKMRAYSFNASEWYSIKSLLEFCFSPIGNFYTKEQKIQILELMINTFKDNLNKSLYF
                     FDSYDKKIYGLDVFYLSINAKENTMFFKAPLEMLLVEIKNSTLVHKIHEHYTHAKKCP
                     AHILTQDACFIMEILLQCLKDNLDIKESCDILDKKSPYGNLFKKSLSVDL"
     gene            5780..7687
                     /locus_tag="R8X70_001265"
     CDS             5780..7687
                     /locus_tag="R8X70_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA synthetase"
                     /protein_id="HEF2929038.1"
                     /translation="MGIVYEQTYRESLQNPEAFWAEAAKKVHWYNEWDRVLDDSDGHY
                     RWFVGGCMNTCYNALDLHVHNGRGDQLALIYDSPVTDTKKKYTYKQLRDRVAKVAGIL
                     ANKGVVKGDRVVIYMPMIPEALIAMLACARLGAIHSVVFGGFAAHELATRIEDAKPRM
                     IISASCGIEVSSIIEYKPILDEAIKKCTHKPTTCLIWQRPQYRANMLPWRDIDWELEE
                     EKTRGVDPVPVLATDPLYILYTSGTTGSPKGVIRSNGGHSVAMKWSMDNIYNAKAGDV
                     FFTASDVGWVVGHSYIVYAPLMNGCTTIVYEGKPVRTPNPSAFWRIIEEYKVNVLFSA
                     PTAFRAIKKEDPKGEWIKKFNLDSLRSIFVAGERCDSDTLKWIEKLTKKPVIDNWWQT
                     ETGWAIAANPLGLEAQVVKAGSPTKPMPGFNLKVLDEKGQELGAGKKGILCLKLPLPP
                     ACLMGIWENDERYRRGYLDQFPGYYLTGDTGYIDKDGYVYVLGRMDGIINVAGHRLST
                     GEMEEIIAKHPDVAECAVIGVNDELKGEIPMGFIVLKEGIERDHRGIVEGVVALVRQE
                     IGAVASFKIATVVSALPKTRSGKILRKNLREIADGSTLNVPATIEDSNVLKACEKAIN
                     ALGYPKNKGEK"
     gene            7687..8562
                     /gene="prpB"
                     /locus_tag="R8X70_001266"
     CDS             7687..8562
                     /gene="prpB"
                     /locus_tag="R8X70_001266"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEF2929039.1"
                     /translation="MSAGKKFKELVKTSKPLTIVGAVNAYSALQATKIGHKALYLSGS
                     GVASASYGLPDLGIIALEEVCIDVRRICSRVDTPLLVDADTGFGGAFNIVRTIKELIR
                     AGAAATHIEDQVAQKRCGHRPNKELVSTEEMCDRIKAAVDAKIDPDFVIMARTDAHAI
                     EGQQKAIERALAYVEAGAEMVFAEAITSLEEYEEFVKNVKVPILANITEFGKTPYFTK
                     EELNRAGVSMVLYPLSANRAMNKAAVQVYESILKNGHQKDVLEIMQTREELYEMLDYY
                     SYEQKLDELFKRGAK"
     gene            8559..9686
                     /locus_tag="R8X70_001267"
     CDS             8559..9686
                     /locus_tag="R8X70_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase/methylcitrate synthase"
                     /protein_id="HEF2929040.1"
                     /translation="MSISEATKKTGGLAGVIAGQSAICTCGLGNGLNYYGYSIEELAQ
                     NAEFEEIAYLLQFGELPNAKELENYKEKIIAQRALSENLKNVLKAIPKEVHPMNLMQT
                     AVAALGALEGENEDFSDQDEKIIRLLGILPSMLCYWHHYVNFGKEIDFNSNQTSIAGY
                     FLEKLKLEAPKEDFIKAMQCSLILYAEHEFNASTFTARICASTKSDIFSAVAAAIGAL
                     RGPLHGGANEAAMHLIESFKSVEDAIEGVNKKLENKELLMGFGHRVYGLGGDPRNALI
                     KVWSKHLGGDDLLFKISEAIEALMKEKRPSLPPNADFYSASAYHFMGIPTEYFTPIFI
                     MSRVSGWCAHIKEQRANNKLIRPSSEYIGVEPRKFVKIQDR"
     gene            9696..11150
                     /gene="prpD"
                     /locus_tag="R8X70_001268"
     CDS             9696..11150
                     /gene="prpD"
                     /locus_tag="R8X70_001268"
                     /EC_number="4.2.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate dehydratase"
                     /protein_id="HEF2929041.1"
                     /translation="MSDMGILEAKRPEFDELLTKIAKYADEFEITSDLALETARYCLM
                     DTIGCGLLALKYPACTKLLGPSVEGAEFRPLGAKVFGTSYQLEPIRGAFNVGAMVRWL
                     DFNDTWLAAEWGHPSDNLGAIWAVADYVSRKNISEGKEPLKVKCVLKAMIKAHEIQGV
                     LALENCFNKVGMDHVLLVRIASTAVAAKLLGCDFEEIRNAISHAFIDGGALRTYRHAP
                     NTGSRKSWAAGDASSRGVDLALKAKTGEMGYPSALSAKFWGYEDVKMKGQKLTIPQEF
                     GSYVMENVLFKISFPAEFHAQTAVEAALALHDEVKDRLEQIEKIIITTQESGHRIINK
                     VGELANPADRDHCIQYMVAVPLIFGRLNADDYEDSVASDERIDALRAKMQVEVDDRYT
                     KEYLESDKRSIANAVQVFFKDGTSTKKVEVEYPIGHKRRRSEGIPLLIAKFKANLAAR
                     LSPKQCEKIMQICEDQKSLEQMNFNEFSDLFWLG"
     gene            11215..12156
                     /locus_tag="R8X70_001269"
     CDS             11215..12156
                     /locus_tag="R8X70_001269"
                     /inference="COORDINATES: protein motif:HMM:NF012699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase family protein"
                     /protein_id="HEF2929042.1"
                     /translation="MLFEKTILKELKVLYKLDNYHGIFAVLWDYLQIILTIAISCFMH
                     NIFMYLFAVLFIGTRQRALATILHESAHRILAKNRKLNDFLGKYPSGYLIFQTFEKYR
                     QSHVIKHHGFLGIENKDPDYDFYIQSKLFASRSLKEFIFRHLILPLFLGKTFDFISYL
                     IRNRLGDFKDKEIKYLILFWIAIFGICFYVNVLDILLMYWFVPLLTSFPMVGHFIEMA
                     EHFPIIKNKREIEKSWNRFGNKIELFFTGLHKENYHLIHHLFANIPFWNLDKAHNILC
                     KNEEYRLLNSNIGGIFSSSNKASSLWKKIIKKELKIC"
     gene            12150..13043
                     /locus_tag="R8X70_001270"
     CDS             12150..13043
                     /locus_tag="R8X70_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEF2929043.1"
                     /translation="MLKNPKFQAFFFAFLAAIFNAFVGIFSVFLFKKGFMSSEVAFYK
                     CFVASVILFAILIYMRKLGALLVFIKQKIFTLLLLAFFGFFMLYHFESAAYTSMGVAN
                     VVFVLFGVGMIITFICEALDAKRFFHLNELLAMVFALLGLWMIFLAEGGTLENFTHLK
                     GLVNAILAGIGYALFLFFTRKLKLGFGLIPLCALLFIGSLYLSIPLFGANLNLNFSLE
                     SLILILALAFLPTIGGFYCTTRALSLAKSNSVQLIELSEPLFAMLFGFLFLAQSVSFL
                     QILGGVFILFAIFVHEFKLKL"
     gene            complement(13027..13230)
                     /locus_tag="R8X70_001271"
     CDS             complement(13027..13230)
                     /locus_tag="R8X70_001271"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929044.1"
                     /translation="MAVDKNSKDQAMQLYLIKITQKNSQNQCQNSSNKQSFACHKASA
                     LSKEILKIQLKKISEKLLFTILI"
     gene            complement(13234..13419)
                     /locus_tag="R8X70_001272"
     CDS             complement(13234..13419)
                     /locus_tag="R8X70_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEF2929045.1"
                     /translation="MYACGQGVEKDLIKAKELSSKACEKDTKLCFAQGWVELFNQNDI
                     LAQKLFYKSCQAGYYTD"
     gene            complement(13395..13742)
                     /locus_tag="R8X70_001273"
     CDS             complement(13395..13742)
                     /locus_tag="R8X70_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929046.1"
                     /translation="MCLLGREFAANTRLPLDLNKALLLFQKACKLGRLDSCVRINNIK
                     FKLLKKLDEETYQSNLKYFLDQNSSFALLEHITTLSKQDIKSAIILAKKSCEQGMMLF
                     VQDFLICMHADKG"
BASE COUNT         4610 a         1816 c         2822 g         4635 t
ORIGIN      
        1 aagatgaaat cagttttata gaattttggc gatttaattc ttattttaaa aataaatgga
       61 aaaattttga agatttttta aaatatcctt tgaaaataga agaagagatt aaatggcgaa
      121 ataaacattt tggagcttat gatcttagtc ctgttatagt gcttgaaaaa attttaccta
      181 caagatatga gattatagca aagagtgaaa tttactatga tgttaaggaa gttataaaaa
      241 gaacatagat ttaaaatatt ttaaaatcac ttaaaatttt gactaaaatt gattggatta
      301 acataatttt taatgatttt tttatataat tatgtttttt aattgttttt aaggccgatt
      361 taatgataga tgtaatgaaa attcaagaaa ttttacctca ccgttatcct tttttgcttg
      421 ttgataaaat cacagagtta aaagttggag aagttgttcg aggatataaa aatatcagca
      481 taagcgatca tgtttttatg ggacatttcc caggtcatcc tatttatcct ggagttttga
      541 ttttagaagg tatggcgcaa acgggtgggg ttttggcttt tgaaagcatg gatgctaagg
      601 tagatccaaa aagtaaggtt gtatatttta caggtattga tggagctaaa tttagaaatc
      661 ctgttcgccc tggagataga cttgattatg aaatgcaagt agttaaaaat cgtggcaata
      721 tgtggatttt taagggtcaa gcttttgtag atggaaattt ggttgcagaa gcagaactta
      781 aagctatgat agtagacaaa taagagagaa tcagtgaaaa aaattcatcc tagtgctgta
      841 atagaagatg gagctatttt aggtgatgat gttgttattg aggcttatgc atatgtaagc
      901 aaagaagcta agataggcaa tggggttgtt atcaagcaag gggcgagaat actttcagat
      961 actaccatag gtgatcattc tcgtgtattt tcatatgcta tagtaggtga tattcctcaa
     1021 gatatatctt ataaggacga gcaaaaaagc ggagtaatta tagggcaaaa ttctactatt
     1081 agagaatttg ctacgataaa ttcgggtaca gctaaaggcg atggttttac tcgtatagga
     1141 gacaatgctt ttataatggc gtattgtcat atcgcacatg attgcctttt aggggataat
     1201 attattttag ccaacaacgc aaccttagca gggcatgtag aactaggaga ttttaccgtt
     1261 gtgggtggtc ttactcctat tcatcaattt gttaaagtgg gtgagggctg tatgatagca
     1321 ggtgcgagtg cgctttcgca agatatagta cctttttgtt tagctgaagg aaatcgtgca
     1381 agtattagaa gtttgaattt agtaggaatt cgtcgtcgtt ttgataagga tgaagtagat
     1441 aggcttagta aagcttttaa attcttgttt agacaggggg atttaaaaga aaatgctcaa
     1501 aaattattag aaaataatga aagtgaaaat gttaataaaa tgtgtaaatt tatattagaa
     1561 acaaaacgcg gaatccctgt atatagaggt aaaaataatg cctagaaaat gcagtttttg
     1621 taatgaagtg gaaaatccac aaagaagaat tttagccaat gaaaacgatg atgcatttat
     1681 ttgtgagtat tgtgttgagg gggcttatag tattatctat ggggaagaaa aagaatttaa
     1741 agagccaaaa catgaacatg gcgttgattt taaagatatt accccaaaag aattaaaagc
     1801 ttatttggat cgctatgtca tagggcaaga tagggctaaa aaagttttta gtgtaggggt
     1861 ttataatcac tataaaagac ttttcaaatc tgaacttcaa gatgatgatg tggagctttt
     1921 taaatccaat atccttctta taggtcctac aggtagcgga aaaaccttac ttgctcaaac
     1981 tttagctaaa tttttggatg tacctatagc catttgcgat gcgacttctt taaccgaagc
     2041 aggttatgtg ggcgaggatg tagaaaatat tttaacccgt cttttgcaag ctgctgatgg
     2101 agatgtagaa agagctcaaa agggcatagt atttatcgat gagattgata aaatagctag
     2161 aatgagtgaa aatcgctcta tcactcgtga tgtgagtgga gaaggcgtgc agcaagcttt
     2221 gcttaagatt atagaaggaa gcttggttaa tattccgcct aaaggaggaa gaaaacatcc
     2281 taatcaagat tttattcaaa ttgatacttc aaatatttta tttgtttgtg gtggtgcatt
     2341 tgatggctta gaaactatac ttaagagaaa attaggcgat aaggtcgtag gctttttcga
     2401 taatgaaaaa gaaaatagca aagctttgct tgaaaagata gagcctgatg atttagtgca
     2461 ttttggcctt atacctgaac ttatagggcg cttacatgtt ataacttctt taaacgagct
     2521 taatgaagat gatatggtaa gaattttgac cgagccaaaa aatgctatcg taaagcaata
     2581 tcaaaaactt tttgctattg atggcgtgaa cttaaaattt gaagatgatg ctttaagaga
     2641 aattgcaaaa ttagccttag aacgaaaaac gggcgctaga ggacttagaa gtattataga
     2701 agaaataatg gtggatttga tgtttgagtt accagaatat aaaaattatg atatcgttat
     2761 caccaaagaa gtggtaagag atggtgcaaa agcgttatta atcaaaaaga aaataagcta
     2821 aaaaagggat aaaaatgatt ttagatcaac ttataggatt tttttcaagc gatatgggta
     2881 tagacttagg aactgctaat actcttgttt tggtaaaaga taagggcata gttatcaatg
     2941 agccttctgt tgtggcagtt gaaagagaaa ggtatggttc caaagcaaaa attttagccg
     3001 taggtaaaga agctaaagat atggtgggaa aaactccagg taacatcgaa gctattcgcc
     3061 cgatgaaaga tggagttatt gctgattttg atatgacaga aaaaatgatt cgttacttta
     3121 tagaaaaaac tcaccgcaga aaaagttttt taagacctag aatcatcatt tcagtccctt
     3181 atggcttaac tcaagttgaa agaaaggctg ttagagaaag tgccttaagt gcaggtgcaa
     3241 gagaagtatt tttgatagaa gaacctatgg cagcagctat tggggcaaat ttacctatac
     3301 aagaacctaa aggaaattta gttgtagata tagggggtgg aacaactgaa attggtgtga
     3361 tttcactagg tgggcttgtt atttcaaagt ctattcgtac tgcaggtgat aagcttgata
     3421 caagtatagt aaattatgtc aaagaaaaat acaatcttat cattggcgaa agaacgggcg
     3481 aggagattaa gatcgctatt ggttcagcta tccagcttcc aaaagaactt tctatggttg
     3541 taaaggggcg cgatcaagtg agtggacttt taagtcgtat cgagcttaca agtgaagatg
     3601 ttagagaggc aatgagggaa tatttaaaag aaatagcaga tgctttaaaa atggtacttg
     3661 aaatgatgcc acctgatctt gcaagtgata tagtagaaaa tggtgttgtc ttaacaggtg
     3721 gtggagcatt gattcgtgga cttgataaat atttaagtga aattgttcgc ttgccagtat
     3781 atattgctga tgaaccactt ttagccgtgg ctaagggaac gggtaaagct ttggaggaaa
     3841 tttcactatt gcaacaattg acgaatgaag aataagctta tctttgtcct tgttttattt
     3901 tttttagttt ttatatcttt ttactatggg ggcttggtaa aaaaaaatgt tcttttggta
     3961 aatgatacgg tgttagaaaa attttatgga attaaggatg ctatcaccga atttttttcc
     4021 aagcattttg atcaagtaga tcaaattgaa caattaaaag caagaaatca agagctagaa
     4081 tatgcagctg tattaactac aagctttgca aaccaattaa atcgtatttt agaggataaa
     4141 aattcaacaa gatacttacc tcaagtttct ttagtaagag ttatttctta tgtaaaatta
     4201 aatgattata aaagattgtg gcttgatttt gccaaagtat ctcctaataa aaataaaggt
     4261 ttgattcatc aaggatacac tataggcatt gcgatcaata aagatggcag agctatggca
     4321 cttttacagg gtgatgaaca atgtgttttt tctgtatata taggtaaaaa taaaattcct
     4381 ggccttatcc aaggcgaaga tgataaactt aaggttaaat ttatacccaa atgggcaaaa
     4441 attaatatag gagatgagat tttaacaagt ggccttgaca atatcttttt ttcagatgtt
     4501 ccagtgggta ttgtaagtgc aatcaaagat gaggatatgt atcaaagtgt tgaagtaaaa
     4561 ccttatgcta acatcaatat ccctgcctat ctttatataa tcgatagttt ataaatcaac
     4621 acttagactc tttttaaata aatttccata tgggcttttt ttatctagga tatcacagct
     4681 ttctttaatg tctaaattgt cttttaaaca ttgtaataaa atttccatga taaaacatgc
     4741 atcttgagtt aaaatatgcg caggacattt ttttgcatgg gtataatgct cgtgaatttt
     4801 atgaactagg gttgagtttt taatctcgac taatagcatt tccaaagggg ctttaaaaaa
     4861 cattgtattt tctttagcat tgatagaaag ataaaacaca tcaagcccat aaattttttt
     4921 atcataagaa tcaaagaaat ataaagattt gttaagatta tctttaaagg tattaatcat
     4981 gagttctaaa atttgaattt tttgttcttt tgtataaaaa tttcctatag gcgaaaaaca
     5041 aaattcaagt aaagacttga tagaatacca ctcgcttgca ttaaaagaat atgctctcat
     5101 tttttcaccc ctttttatgc gatatattct agcctcttcg ctgtcgttat tttgatatac
     5161 taaaggcacg ataaaatccc tataagcggg atttggaaaa gcagggtgta atataagtga
     5221 accttcattt tcattttcaa aaatatattt taatcctccg atgtatcctt cgtcaatgat
     5281 gcgaatttca ttattttcta tttgatttaa gagtgtataa aattcgtttt cattgctttc
     5341 ccatatttta aaaggatagc gaaaaaattc acaaattttt tctttacttt tggtatcgag
     5401 ttcttttact gtgtcatttt ctataaattt agcaagcgtt ctacgatctt tgcccaaaat
     5461 tgttgcaaat ttgctcaaac ttaagcctga tttttccaaa attacttgtg ttctatcttt
     5521 agaatttaac attgtctcac tcttaaaaat tatttttgtt actttttgat acaaatatat
     5581 ttttttcatt attttttata ttttctaatt attaaaaata taggtaaata tatatacaaa
     5641 aattaaaatt ttgttcaaaa aatatacaaa atttattttt ttagctacaa aatcacacaa
     5701 ttaaaccaaa aaattggcat tttatttttc aaacaaaaac tctataatgc aaattcaact
     5761 tatcaagaaa ggatggatta tgggtattgt ttatgagcag acttatcgag aatctcttca
     5821 aaatcctgaa gcattttggg ctgaagcagc taaaaaagtg cattggtata atgaatggga
     5881 tagggtgctt gatgatagcg atgggcatta cagatggttt gttggcgggt gtatgaatac
     5941 ttgttataat gcgcttgatt tacatgtaca caatggcagg ggcgatcaat tagcactgat
     6001 ttatgattct cctgttacgg atacaaagaa aaaatatact tataagcaac ttcgtgatcg
     6061 tgttgcaaaa gtagccggaa ttttagcaaa caagggcgtg gttaaagggg atcgcgttgt
     6121 tatttatatg ccaatgatac ctgaagcact tatagctatg cttgcttgtg ctaggcttgg
     6181 ggctattcat agtgttgtat ttggaggctt tgcagcacat gaacttgcta cgaggataga
     6241 agatgctaaa cctagaatga ttatcagtgc aagttgcggg atagaagtaa gtagcattat
     6301 cgagtataaa cctattttag atgaggctat taaaaaatgt actcataagc ctacgacttg
     6361 tttgatttgg caacgcccac aatatagagc aaatatgctt ccttggaggg atattgattg
     6421 ggagcttgaa gaggaaaaaa ctcggggtgt agatcctgta cctgttttag ctaccgatcc
     6481 gctttatata ctttatactt caggcaccac aggttctcca aaaggagtaa tccgctctaa
     6541 tggaggtcat tctgtggcta tgaaatggtc gatggataat atttataatg ctaaagcagg
     6601 agatgtcttt tttaccgctt ctgatgtagg ttgggttgtg ggacattctt atatagttta
     6661 tgcacctttg atgaatggat gtacaactat agtttatgag ggaaaacctg taagaacgcc
     6721 taatccttca gcattttgga gaattattga agaatataaa gtgaatgtgc ttttttcagc
     6781 cccaactgct tttagggcga ttaaaaaaga agatcctaaa ggagaatgga ttaaaaaatt
     6841 taatcttgat agcttaagat ctatttttgt ggcaggtgaa agatgcgata gcgatacgct
     6901 taaatggata gaaaagctta caaaaaaacc tgtgattgat aattggtggc aaactgaaac
     6961 aggttgggcg atcgcggcta atcctttggg cttggaagca caagttgtta aagcaggaag
     7021 tcctacaaaa cctatgccag gatttaatct taaggtttta gatgaaaaag gtcaagagct
     7081 tggagcagga aaaaaaggaa ttttgtgcct aaaacttcct ttacctccag cttgtttaat
     7141 gggaatttgg gagaatgatg aaagatatcg taggggatat ttagatcaat ttccaggcta
     7201 ttatctaaca ggagacacag gctatatcga caaagatggc tatgtgtatg ttttaggaag
     7261 aatggatgga atcatcaatg ttgcaggcca tagactttca actggagaaa tggaagagat
     7321 tatagcaaaa catcctgatg ttgcagaatg tgcggttata ggtgtaaatg atgagcttaa
     7381 aggtgaaata cctatgggct ttatcgtttt aaaagagggt atagagcgag atcatagggg
     7441 tatagttgaa ggagttgtag ctttggtgcg tcaagaaatt ggagccgtag cttcgtttaa
     7501 aattgccaca gttgttagtg ctttacctaa gacaagaagt ggaaaaattt tgcgtaaaaa
     7561 tttaagagaa atagctgatg gttcaacctt aaatgttccg gctactatag aggatagtaa
     7621 tgttttaaaa gcttgcgaaa aagctattaa tgctttagga tacccaaaaa ataaaggaga
     7681 aaaataatga gtgcaggaaa aaaatttaaa gaattagtaa agacaagcaa acctttgacc
     7741 atagtaggag ctgtcaatgc ttatagtgct ttacaagcta ctaaaatagg acacaaagct
     7801 ttatatcttt cgggaagtgg cgtggcaagc gcgagttatg gcttgcctga tttggggatt
     7861 atcgcacttg aagaagtatg cattgatgta agacgcattt gctctagagt ggatacgcct
     7921 ttattagttg atgcagatac aggttttgga ggtgctttta atattgtaag aacgataaaa
     7981 gaattaattc gtgcgggtgc agcggcaact catattgaag atcaagtggc tcaaaaaagg
     8041 tgcggacatc gtcctaataa agaattagta agcactgaag agatgtgtga tcgtattaaa
     8101 gcagcagtag atgcaaaaat cgatcctgat tttgtgatta tggcaagaac ggatgcgcat
     8161 gcaattgaag gtcagcaaaa agctatcgaa cgggctttag catatgttga ggctggagct
     8221 gaaatggttt ttgctgaagc tattacaagt ttggaagaat atgaagaatt tgttaaaaat
     8281 gtaaaagttc caattcttgc aaatatcaca gaatttggaa agactcctta ttttaccaaa
     8341 gaagaattaa atagagcagg agtgtctatg gtgctgtatc ctttaagtgc aaatcgtgcg
     8401 atgaataaag ctgcagtaca agtttatgaa agtatattga aaaacggaca tcaaaaagat
     8461 gtgcttgaaa ttatgcaaac tagagaagag ctttatgaaa tgttagatta ttattcttat
     8521 gagcaaaaat tagatgaatt atttaaaagg ggtgcaaaat gagtataagt gaagcaacta
     8581 aaaaaacggg tggattggca ggagttatcg caggacaaag tgcaatttgt acttgcgggc
     8641 ttggaaatgg actaaattat tatggttata gcatagaaga gttagcgcaa aatgcagaat
     8701 ttgaagaaat agcttattta cttcagtttg gagaattacc caacgcaaaa gaattggaaa
     8761 attataaaga aaaaatcatt gctcaaagag ctttgagtga gaatttaaaa aacgttttaa
     8821 aagctatacc taaagaagtt catcctatga atttgatgca aacagctgtt gcagcattgg
     8881 gagctttaga gggtgaaaat gaggatttta gcgatcaaga tgaaaaaatc atcagacttt
     8941 tgggaatttt accgagcatg ctttgttatt ggcatcatta tgtgaatttt ggtaaagaaa
     9001 ttgattttaa ttccaatcaa acaagcatag caggatattt tttggaaaaa ttaaaacttg
     9061 aagctccaaa agaagatttt atcaaggcta tgcaatgctc attaatcctt tatgcagagc
     9121 atgaatttaa tgcttcaact tttacagcta gaatttgtgc ttctacaaaa agtgatattt
     9181 ttagtgcggt tgctgcggct attggagctt taagagggcc tttgcatgga ggagcaaatg
     9241 aagcagcgat gcacttaata gaaagtttta aaagtgttga ggatgccatt gagggtgtga
     9301 ataaaaaatt agaaaataaa gagcttttaa tgggttttgg tcaccgtgtt tatggacttg
     9361 gaggtgatcc tagaaatgca cttattaaag tttggagtaa gcatttaggg ggcgatgatt
     9421 tgctttttaa aatcagtgaa gccatagaag ctttgatgaa agaaaaacgc ccaagtttgc
     9481 cacctaatgc agatttttat agtgcatcag cttatcattt tatgggaatt ccaactgagt
     9541 attttacgcc gatttttatt atgagtcgcg taagtggttg gtgtgcgcac attaaagagc
     9601 aaagagcaaa caataagctt atacgcccaa gtagcgaata tataggcgtt gaaccaagaa
     9661 aatttgtaaa aattcaagat agataaggag aaaaaatgag tgatatggga attttagagg
     9721 caaaacgccc tgaatttgat gaacttttaa caaaaattgc aaaatacgct gatgaatttg
     9781 aaatcacaag tgatttggct ttagaaacgg ctagatattg tttgatggat actataggtt
     9841 gtgggctttt agcgcttaaa tatcctgctt gcaccaagct tttaggacca agtgttgaag
     9901 gggctgaatt tagacctttg ggtgcaaaag tgtttggaac atcttatcaa ttagagccaa
     9961 tccgtggggc ttttaatgtg ggtgctatgg taagatggct tgattttaat gatacatggc
    10021 ttgcggctga atgggggcat ccaagcgata atttaggtgc gatttgggca gtggctgatt
    10081 atgtaagtcg taaaaatatc agcgaaggaa aagagccttt aaaagtaaaa tgtgtcctaa
    10141 aagccatgat aaaagctcat gaaattcaag gagttttggc gcttgaaaat tgttttaata
    10201 aagtaggaat ggatcatgtt ttacttgtaa gaatagcaag cactgcagta gctgcaaagc
    10261 ttttgggttg tgattttgaa gaaattcgca atgctatttc tcatgccttt atcgatggtg
    10321 gagctttaag aacttatcgc catgcgccaa atacaggcag tagaaaaagc tgggcagcag
    10381 gtgatgcttc aagtcgtggt gtggatcttg ctttaaaagc taaaacagga gagatgggtt
    10441 atccttcggc tttaagcgct aaattttggg gttatgaaga tgtgaaaatg aaaggacaaa
    10501 aacttaccat tcctcaagaa tttggttctt atgtaatgga aaatgtttta tttaaaattt
    10561 cttttccagc tgaatttcac gcacaaactg cagtagaagc agctttagct ttacatgatg
    10621 aggtaaaaga tcgtttagag caaatagaaa aaatcattat cacaactcaa gaatcaggac
    10681 atcgcatcat taacaaagta ggcgagcttg caaaccctgc cgatagggat cattgtatcc
    10741 aatacatggt tgctgtgcca cttatatttg ggcgtttgaa tgcagatgat tatgaagata
    10801 gtgttgcaag cgatgaaaga atcgatgctt taagagctaa gatgcaagta gaagtggatg
    10861 atcgctatac aaaagagtat ttagaaagcg ataaaagaag catagctaat gccgtgcaag
    10921 ttttctttaa agatggcaca agtacaaaaa aagtcgaagt tgagtatcct ataggacaca
    10981 aaagacgcag aagtgaagga attccgcttt taattgctaa atttaaagcc aatcttgctg
    11041 cgcgtttaag tccaaaacaa tgtgaaaaaa tcatgcaaat ttgcgaagat caaaagagct
    11101 tagagcaaat gaattttaat gaatttagcg atcttttttg gttgggttaa ggcagacaca
    11161 agactattct agtcttgtgt ttaatatagt taatataatg atttaggatt aaaaatgtta
    11221 tttgaaaaaa ctattctaaa agaacttaaa gtgctttata aacttgataa ctatcatgga
    11281 atttttgctg tattatggga ttatttacaa attattttga caatagccat ttcttgtttt
    11341 atgcacaaca tttttatgta tttatttgca gttttattta ttggcacgag acaaagggct
    11401 ttagcgacta ttttacacga gtcagcccat agaatactgg caaaaaatag aaaattaaat
    11461 gattttttag gtaaatatcc aagtggatat cttatttttc agacttttga aaaatacaga
    11521 caaagtcatg ttattaaaca tcatggtttt ttaggaattg aaaataaaga tcctgattat
    11581 gatttttata tacaatcaaa gctttttgct tcccgttctt taaaagaatt tatttttagg
    11641 caccttatct tgcctttgtt tttgggtaag acttttgatt ttatttctta tcttataaga
    11701 aatcgcttgg gtgattttaa ggataaagaa attaaatatc ttattttatt ttggattgct
    11761 atttttggta tttgttttta tgttaatgtt cttgatattt tgttaatgta ttggtttgtg
    11821 cctttactta caagttttcc tatggtagga cattttatag agatggcaga acattttcct
    11881 attataaaaa acaaaagaga aatagaaaaa tcttggaata gatttggcaa taaaattgaa
    11941 ttatttttta ctggcttaca taaggaaaat tatcatttaa tccaccattt gtttgcaaat
    12001 attccttttt ggaatttaga taaagctcat aatattttat gtaaaaatga agaatacaga
    12061 cttttaaact ctaatatagg aggtattttt agctcttcaa ataaagcttc ctctctatgg
    12121 aaaaaaataa ttaaaaagga gcttaaaata tgctaaaaaa tcctaaattt caagctttct
    12181 tttttgcttt tttagccgct atatttaacg cttttgttgg aatttttagc gtttttcttt
    12241 ttaaaaaagg ttttatgagt tcagaagtag ctttttataa atgctttgtg gctagtgtga
    12301 ttttgtttgc gattttaatt tatatgagaa aattgggcgc tttgctagtt tttatcaagc
    12361 agaaaatttt cacacttttg cttcttgctt tttttggatt ttttatgctt tatcattttg
    12421 agagtgctgc ttacacaagt atgggtgtgg ctaatgtagt ttttgtgctt tttggtgtgg
    12481 ggatgattat cacttttatt tgtgaagcat tggacgctaa acgctttttt catttaaatg
    12541 agcttttggc tatggttttt gcacttttgg ggctttggat gatttttttg gccgaaggtg
    12601 gaactttgga aaatttcact catttaaaag gccttgtaaa tgctatttta gcagggattg
    12661 gttatgcttt atttttattt tttactagaa aattaaaact gggttttggg ttaattcctc
    12721 tttgtgcttt gctttttata ggaagtttgt atttgagtat tcctttgttt ggagcaaatt
    12781 taaatcttaa tttttcttta gagagtctta tcttgatttt agctttggcg tttttgccta
    12841 ctataggcgg attttactgc actactagag ccttaagtct tgcaaagtca aattcagtcc
    12901 agcttataga acttagcgag cctttatttg ctatgctttt tgggtttttg tttttggctc
    12961 aaagtgtttc atttttgcaa attttaggtg gagttttcat actttttgct atttttgttc
    13021 atgaatttaa attaaaattg taaaaagcag tttttcagaa atttttttca attggatttt
    13081 taaaatttct ttagaaagag cagatgcttt atggcaagca aaagattgtt tattgcttga
    13141 gttttgacat tgattttgac tatttttttg tgtgatttta ataagatata attgcatagc
    13201 ttgatctttg gaatttttat caactgccat attctaatca gtataatatc cagcctgaca
    13261 agatttataa aaaagttttt gggctaaaat atcattttga ttaaataatt caacccagcc
    13321 ttgcgcaaag cacaactttg tatctttttc acaagcttta gagcttaatt ctttagcttt
    13381 gattaagtct ttttctaccc cttgtccgca tgcatacata taagaaagtc ctgcacaaat
    13441 agcatcatgc cttgctcgca gctttttttg gctagtataa ttgctgattt tatatcttgt
    13501 ttactaagcg tagtgatatg ttctaataaa gcaaaacttg agttttgatc taaaaaatat
    13561 tttaaattgc tttgataagt ttcttcatct aactttttca gtaatttaaa ttttatattg
    13621 ttgattctca cgcaagagtc caatctccca agtttacaag ctttttggaa aagcaataaa
    13681 gctttgttta aatccaaagg aagtctcgtg tttgctgcaa attctcttcc taataagcac
    13741 atgcggtggc attattttct aagcattgtt tttgaaaaag acttaaatta ccctcgaaaa
    13801 aatattcccc tttggagtaa gagcaaattt ttcctttaag ggctgattta aaatttcttt
    13861 taaactctcg tccaagaatt gat
//
LOCUS       DAQUWA010000048        12611 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.048, whole genome shotgun sequence.
ACCESSION   DAQUWA010000048 DAQUWA010000000
VERSION     DAQUWA010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12611
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.048"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(62..1174)
                     /gene="ftsZ"
                     /locus_tag="R8X70_001274"
     CDS             complement(62..1174)
                     /gene="ftsZ"
                     /locus_tag="R8X70_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEF2929047.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISNSLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAENGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFKLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     IEISAAANNIEEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDRDSIAKKAAEEAE
                     TPKKNPYLNLRKVSGGFDEEIMAQIETPTFLRRQMD"
     gene            complement(1191..2579)
                     /gene="ftsA"
                     /locus_tag="R8X70_001275"
     CDS             complement(1191..2579)
                     /gene="ftsA"
                     /locus_tag="R8X70_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEF2929048.1"
                     /translation="MILNILGIDLGSTQTCAIVAQKDEEGLKIIGFAKAKTNGVKKGA
                     ITNIELASKSIEEAVRNAEMMSGVHYDKVVVSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNALIQIPSMGDER
                     KVNEVSLDIISNVIYARAEETLMILAKILSDNRYANSIGGGVVLTGGMTKLAGIDELA
                     PATFDNRSVRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENYNRQIRQEIIPQKEVENETKSDFFGENLQENDTIIIQEQLDFKEPKEKKPSV
                     FSNIWHKIMNQF"
     gene            complement(2576..4063)
                     /locus_tag="R8X70_001276"
     CDS             complement(2576..4063)
                     /locus_tag="R8X70_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEF2929049.1"
                     /translation="MLTWMQHHKKYLVVTIWISTIAFVGAGFLGWGAYDFNLNRSSSV
                     AVVGDEKINYNEFNVRYNQIFNYYNQISNGGLNEESAKQLGIENAALSSLVEDKLLLN
                     FSKDLGLGSSENEVIQALAETKAFQDPSGDFNKTIYYELLNANNMTPKEYEKTLSNEI
                     IIGKLEQIFNLPQTDEELKMLGASYFMQDSLNIAKLEQDKENIKVNEEELKKLWNEHK
                     EDYKTKKVYEISTYYLPVDMQKIDDSKLEEFYNNENNKFKYKDFSGKIMSFEAAKKDV
                     AKDYALAQLKNIANAKFLELKEGKDKFQKDENITDSDVYYPLEALSRVKNGDVLRPSE
                     YQNGYIIIKLNKTNPVRTKTFDEAKEELMPIYISEQVKKNLEEKAKQNLENFSGTNIG
                     FVSRDTVRNDAKISNILNEAEFSYFLMNVFNSDQNRSYVILNEDKAMLYKINKQKLDM
                     NPEKFQQYRIMLNQNLQSLKANEMKQELIEELKKTYPIKIYYKGK"
     gene            4216..5151
                     /gene="rsmH"
                     /locus_tag="R8X70_001277"
     CDS             4216..5151
                     /gene="rsmH"
                     /locus_tag="R8X70_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEF2929050.1"
                     /translation="MKIPHIPVLLNEVNQAFEKLNSGYFLDCTLGFGGHSESLLKDHP
                     NLKLIACDQDKEALEFSKKRLHDFKDRTEFVLSNFSQILDQISHDKLNDLKGILADIG
                     VSSYQLDNNKRGFNLHSDFLDMRMNQDAKISAFEIINNYTQEQLSDIFKKYGELNDGY
                     FIAQKICQERQKNKIKSAKELYEIIGKTKQNHRSVSKATLVFQAIRIEVNQELEVLKN
                     FLEKLEKIKLKNCILAIICFHSLEDRIVKNYFKKWAKNCICDERAFRCECGNNHSLGE
                     IISKKAITPSKEEIMINSRSSCAKMRLFHFKNMEK"
     gene            5151..6038
                     /locus_tag="R8X70_001278"
     CDS             5151..6038
                     /locus_tag="R8X70_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929051.1"
                     /translation="MLDDDFLKEKQNIRQKMLKFSRAVNQGKPLDDDLKEEISSDDIL
                     RRRFKKRSNHFLDEIEEDYELEYTKKSNIYLKEDLINVKLEEKQSLAKKIFSKIKEKN
                     KNQEPKKKKTKKLFSFLKKKEIQGIQNKNTHNTQEKHLHTDKQIEIKKIQNNKIQPTQ
                     TDPKPDIKQSLENLQKKIQTQEVKIEIEKSEIQPIKTEHDEDTQKVKNVLLEGFSNAT
                     KEDKNLNFNHLLFAVLFVSFALVLFVPQIYIRNQIYYLSREIATLRVEESVLDEENKD
                     LKRRLEIMRFQNQILDYLE"
     gene            complement(6026..6517)
                     /locus_tag="R8X70_001279"
     CDS             complement(6026..6517)
                     /locus_tag="R8X70_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929052.1"
                     /translation="MKKFKDFSCNFLFKISDQPVLLRDLLEANALFNDGMLVDPSKLN
                     FNFKILNSYIYFGIFCALVLLPLLLITHYLFTRLDFHISIISAVAVTACVFISYDIFK
                     VYARKMISKKLIQKAWALHFPYFSYEKYSIMAGNFYKEALKEEIPKANLEQYVLEKII
                     HSK"
     gene            complement(6591..7781)
                     /locus_tag="R8X70_001280"
     CDS             complement(6591..7781)
                     /locus_tag="R8X70_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEF2929053.1"
                     /translation="MKILVLNSGSSSIKFKFFDDKVVKASGLVEKIGEEKSKVILKNA
                     LNDETFERELPIKNHEHGLQIVNELFKESGILEDLNALDGCGHRIVHGGRNLSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANAAIFDTAFHRTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAFVSARAAQLLGKNKEDLNAISAHLGNGASVCAIEGG
                     KSIDTSMGFTPLEGLVMGTRCGDLDPAILPFISHLKGLTIEEIDTLLNKKSGLYGICG
                     SNDFRDIGAKIEQGDDRARLAFDMFCYRLLKYIGAYFTVLPRTDAIIFTGGIGENAAL
                     VRQKVCERLSHLGVELDIELNNKKASCERMISTANSKVKIFIVPTDEELEIARITEEL
                     INKS"
     gene            complement(7795..9300)
                     /gene="pta"
                     /locus_tag="R8X70_001281"
     CDS             complement(7795..9300)
                     /gene="pta"
                     /locus_tag="R8X70_001281"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEF2929054.1"
                     /translation="MMANLYLMRSRSDELNTLVTTKLLKNYSKIYKNIAIYCPVIYVH
                     RIPVLQGWLEEFDIKQTLKNAYSFTFREAMEEFSKDPHSFFNTILEEYEELNRKYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINNEDKLIAQKYFDEALDGRDYALINE
                     NFNFEEMHKLQAYDFMTPHRFKYELIKKSVKNKKTVVLPESNDERILKAVEILLKSSV
                     VDLILLGDEQDIKQKADELALDLTAVKILNPLHSEYNEEFATLLYEARKSKGMSLEEA
                     KELVKDRTYFGTLLIHSGKADAMVSGASTTTAETIRPALQIIKTQEGVDSVSGIFFMG
                     LDDKVLAFADCAVNPNPNAEQLATSAYVSAMTAKSFGIEPRIALLSYSSGDSGKGESV
                     DLVKEALRIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGNVNVYIFPDLDAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            9402..10100
                     /gene="flgH"
                     /locus_tag="R8X70_001282"
     CDS             9402..10100
                     /gene="flgH"
                     /locus_tag="R8X70_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HEF2929055.1"
                     /translation="MKKVLFYVLPFAFFGCSATVDPQISMKPPAYVEELAPKQSNNVE
                     TSPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGAL
                     TGGSGLLGTAIDKVNAYSNIGFQTNSTNNYQGTGTQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSRYIADAKILYKTEGEVDRSTR
                     KPWGSKVIEAIWPF"
     gene            complement(10184..11257)
                     /gene="ispG"
                     /locus_tag="R8X70_001283"
                     /gene_synonym="gcpE"
     CDS             complement(10184..11257)
                     /gene="ispG"
                     /locus_tag="R8X70_001283"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEF2929056.1"
                     /translation="MEYKRFKTRQIKVGDVLIGGDAPISVQSMLFTKTRDIEGSLEQL
                     NRLYFTGANIVRLACLDMADARALKEIKAKSPLPLIVDIHFNHNLAVFCAEFIDGVRI
                     NPGNIGSKENIKDVVKACKERGIPIRIGVNHGSIEKEFSDKYGYGVDAMLESALYNIK
                     LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTIKSSIAL
                     GNLLLKGIGDTMRVSMTGELEEEIKVARAILQDSGVQKSGVNIISCPTCGRIQSDLIS
                     AIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLK
                     ENELVDRFLAEVEDEVKSREIKE"
     gene            11384..11902
                     /locus_tag="R8X70_001284"
     CDS             11384..11902
                     /locus_tag="R8X70_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEF2929057.1"
                     /translation="MQFITKGGVIWLTGLAGSGKSCIAEALYQKLKEKYDNIIYLDGD
                     EFRELLGYYKYDKQSRIEVSIKRSKFAHFLSSQNMLVIVSAISMWDEIYRYNRKTLKN
                     YYEIYIKCDIEELKKRDKKRLYSKALSGKISNVVGIDINYDEPNADLILDNSKLDLLD
                     EKVDRILQALNT"
     gene            11937..>12611
                     /locus_tag="R8X70_001285"
     CDS             11937..>12611
                     /locus_tag="R8X70_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein"
                     /protein_id="HEF2929058.1"
                     /translation="MEQILKILKQMLSPDQAQILLKALKNSNNENFYNFALENIEIIC
                     EWLNSKEFQENYTNHPYPPLLNPNYIDTDASRHCAELAWDLNLPLPKHYKFIYISPHG
                     VGAAAFLRYLNEACNVFCLASWMLPYDAKERYCINYMCLNDKNISDQAINISELNIIN
                     LEKYLALLDPHSKVICGIRDPIGILKHNWGRDWSKVQRNFQNEFDLTYDYRNYINFLN
                     HKKPEIK"
BASE COUNT         4392 a         2220 c         1705 g         4294 t
ORIGIN      
        1 aatagtaaaa attttaaaaa agcaagactt aagtaaaaat cttgcttaaa aatattctat
       61 tttagtccat ttggcggcgt aagaaagtag gagtttcaat ttgagccatt atctcttcat
      121 caaaaccacc acttactttt ctaagattta aataaggatt tttcttagga gtttcagctt
      181 cttcagcggc ttttttagct atgctgtctc tatcttcaaa tcctgtggca ataatggtca
      241 cttctaccct atcttccatg ctatcatctg tagtagaacc aaaaataatc tttgcatttt
      301 catcaacaat ttcttctata ttatttgcag cagcagaaat ttcaattaaa gagcaattag
      361 aacttgtttt aaaatgtaaa ataacccctt tagctccttt aatatccata ccatctaata
      421 atggggattc tatggcatta gaaagagcct cttcgatagc attttcaccg ctagcactgc
      481 ctacgcccat aagcgctaaa ccacgatggc tcattatggt tctaacatca gcaaagtcaa
      541 cattgatatc accattgtct aaaagtatag acaccatacc cttaacagca cgcgccaaaa
      601 tatcatcaac taatttaaaa gcatctttaa ttcctgcttt tttatcgata atacttaaaa
      661 gcttttcgtt ttgaattaca aggatagaat cactttcttt tttcaattca aggagtccgt
      721 tttcagcaag tttttttctt tgtttccctt caaaagcaaa aggcatagtt acaacagaaa
      781 cagttaaagc acctatttct ttagctgctt gtgcgattac tggagtagcg cccgttcctg
      841 tgccaccacc aaaacctgaa gcaataaaaa cgatatcact ttggctaaga ctagctttaa
      901 tctcttcaaa gctttctcta gcactctctg ctccaacctc tggtagcatg cccgcaccca
      961 agccttttgt ttttttctcg ccaagttgaa ttttggtttt tgctaatgaa tttgaaatag
     1021 cttgtgcatc agtattagcc gcgattaaat cgaggtcatt taagcccatc ttgaccatat
     1081 gattaatcat atttccaccg ccaccaccgc agcctataac tttaatttta gcgcctttat
     1141 tatgttgcat ctcttctact aaaaattcgc tcataaaaac tttctccttg ttaaaattga
     1201 ttcattattt tatgccaaat atttgaaaaa acactaggct ttttctcttt tggctcttta
     1261 aaatctaatt gttcttgtat tattattgta tcattttctt gcaaattttc gccaaaaaaa
     1321 tcagattttg tttcattttc cacttctttt tgtggaatta tttcttgtct aatttggcgg
     1381 ttataatttt ctatctcccc tttatatctt aacttttcat ttgaatcaag ttcataaggc
     1441 gtaaaataac ccgcaccata taaacaaagt cctatagcac aagtattttc aggatcatta
     1501 aaaatttcac taaacccagt aattaaatct tttctagcag tagcaagtct aacagaacga
     1561 ttatcaaaag ttgcaggagc taattcatca atacctgcta atttagtcat tccgcctgtt
     1621 aatacaacgc caccccctat gctatttgca taacgattgt cgcttaaaat tttggctaaa
     1681 atcattaaag tttcttcagc tcttgcatag attacatttg agatgatatc taaagaaact
     1741 tcatttactt ttctttcatc tcccatagaa ggaatttgta tcaatgcatt aggttgttga
     1801 gaaagggctg cataatttaa tttaattttc tcagcttctt ttaaaggagt gtgcaaagcc
     1861 atcgataaat cttgagtaat attaatcgat ccaatttgca agcaatcatt ataacgaatt
     1921 gaatttccag tatgaacaac catatcgcag atcgctccac ccatatcaat caaaacagca
     1981 cctagttctt tttcactatc atctaaacaa gctatagctg aagcatagcc agaaaggact
     2041 atattatcaa ctcttaaatc agccaactca acagcttttt ttaaattttt aatatgagat
     2101 tcttgagaaa taactatatg agtcgaaacc tccaagcgat ttccgctcat acccaaagga
     2161 tcatctacat gttctaaatc atttacctta aaattataag gtaaaacatg aataatttca
     2221 taaccactcg gaagatttgc agtgtgtttg gctgtgctta ccgcacgatg aatttctttg
     2281 atgcctattt catgatttgg tatatttact acacctatac tatcaacact tttagtataa
     2341 gcgcccgaaa tagaaaccac tactttatca taatgaacac cgctcatcat ctctgcattt
     2401 ctaactgctt cctcgatcga ttttgaagca agctcgatat tggtaatagc gccttttttt
     2461 acaccattgg tttttgcttt tgcaaaacca ataattttta aaccttcctc atctttttga
     2521 gcgacaatgg cacaagtttg tgttgaacct aagtcaattc ctaatatatt caaaattatt
     2581 tacctttata ataaattttt attggatatg tttttttaag ctcttcgatt aactcctgct
     2641 tcatttcatt agcttttaaa ctttgtaaat tttgattaag cattatgcga tattgctgaa
     2701 atttttcagg attcatatca agcttttgct tattaatttt ataaagcata gccttatctt
     2761 catttaaaat aacataagaa cgattttgat cagaattaaa aacattcatt agaaaataac
     2821 taaattctgc ttcatttaat atattactaa ttttagcatc atttcttaca gtatccctgc
     2881 ttacgaaacc tatattagtt ccgctaaaat tttctaaatt ttgcttagct ttttcttcta
     2941 aattcttttt cacctgttcg ctgatataaa taggcataag ctcttcttta gcctcatcaa
     3001 aagtcttagt tcttacagga ttggttttgt taagcttgat aataatataa ccattttgat
     3061 attcactcgg tcttaacaca tctccatttt ttacccgaga taaagcctca agtggatagt
     3121 aaacatctga atctgtgata ttttcatcct tttggaattt atctttacct tctttcaatt
     3181 ccaaaaattt agcattagct atgtttttaa gctgtgctaa agcataatct ttagcaacat
     3241 cctttttagc agcttcaaaa ctcatgattt tgccactaaa atctttatat ttaaatttat
     3301 tattttcatt attataaaat tcttctagct tactatcatc aattttttgc atatccaccg
     3361 gtagataata agtagaaatc tcatatactt tttttgtctt ataatcttct ttgtgttcat
     3421 tccaaagctt tttaagctct tcttcattaa cttttatatt ttctttatct tgctctagtt
     3481 ttgctatatt taaagaatct tgcataaaat aactagctcc tagcattttc aactcttcat
     3541 ctgtttgagg gagattgaat atttgttcta gtttgccgat aataatttca tttgaaagag
     3601 ttttctcata ttcttttgga gtcatattgt ttgcattcaa aagttcataa taaattgttt
     3661 tattaaaatc acctgaagga tcttgaaagg ctttagtttc agcaagtgct tgaataactt
     3721 cattttcact tgaacctaat cccaaatctt tagaaaaatt taacaaaagc ttatcttcaa
     3781 ccaaagagct taatgcagcg ttttcaattc ccaattgctt agcactctcc tcatttaagc
     3841 caccgttgct aatttgattg taataattaa aaatctgatt atatcttaca ttaaattcat
     3901 tataattgat tttttcatct ccaactacag caacactcga acttctatta agattaaaat
     3961 cataagcacc ccaacctaaa aacccagctc caacaaaagc tatggtgcta atccatatag
     4021 taacaacaag atattttttg tgatgttgca tccaagtaag catatcattc cttgataaaa
     4081 attaaactac atattttatc gcagaagtgt ttaattagag tttaattagt ggttttttgt
     4141 taaatatttt cattttgatt ttagttaaaa tttcgttata attatagctt ataaaaattt
     4201 tataggatat aggatttgaa aattccacac attcccgttt tgctcaatga ggtaaatcaa
     4261 gcatttgaaa aactaaactc aggatatttt ttagattgta ctttgggttt tggtggccat
     4321 agcgaatcct tacttaaaga tcatccaaac cttaaactta tagcatgcga ccaagacaaa
     4381 gaagcgcttg aattttctaa aaagcgtctt catgatttta aagatagaac agaatttgta
     4441 ttaagcaatt ttagtcaaat tttagaccaa atttcacacg ataaactgaa cgatctcaaa
     4501 ggcattttag ctgatattgg agtatcttct tatcaacttg acaataacaa acgaggcttt
     4561 aatcttcatt ctgatttttt agacatgaga atgaatcaag atgctaaaat ttcagctttt
     4621 gagattatta ataattatac ccaagagcaa ttgagtgata ttttcaaaaa atatggggaa
     4681 ttaaatgatg ggtactttat cgctcaaaaa atttgccaag aaagacaaaa aaataaaata
     4741 aaaagtgcta aagaacttta cgaaataata ggaaaaacaa aacaaaatca cagaagtgtt
     4801 tctaaagcaa ccctagtttt tcaagctatt agaatagaag tcaatcaaga acttgaagtt
     4861 ttaaaaaatt ttttagaaaa attagaaaaa attaaattaa aaaattgtat tctagctatc
     4921 atttgctttc attctttaga agataggata gtaaaaaact attttaaaaa atgggctaaa
     4981 aattgtatct gtgatgaaag agcttttagg tgcgaatgtg gaaacaatca ttctttagga
     5041 gaaattataa gcaaaaaagc tataactcca agcaaagaag aaattatgat taattctcgt
     5101 tcaagttgtg caaaaatgcg cctgtttcat tttaaaaata tggaaaaata atgctagatg
     5161 atgatttttt aaaagaaaaa caaaacatac gccagaaaat gcttaaattt tctcgcgctg
     5221 ttaatcaagg taagccttta gatgatgatt taaaagaaga aatctctagt gatgatattt
     5281 taagacgccg ctttaaaaaa cgctcaaatc atttcttgga tgaaatagaa gaagactatg
     5341 agttagaata tacaaaaaaa tcaaatatat acttaaaaga agatttgata aatgttaaat
     5401 tggaagaaaa gcagtcttta gctaaaaaaa ttttttccaa aataaaagaa aaaaacaaaa
     5461 atcaagaacc aaaaaagaaa aaaacaaaaa aacttttttc ttttctgaaa aaaaaagaaa
     5521 ttcaaggtat acaaaataaa aacacacaca atactcaaga aaaacatttg catacagaca
     5581 agcaaataga aatcaaaaaa atacaaaata acaagattca acccacgcaa actgacccaa
     5641 aacccgatat aaaacaaagt ctagaaaatt tacaaaaaaa aatacaaact caagaagtaa
     5701 aaatagagat tgaaaaatcc gaaattcaac ccattaaaac agaacatgat gaagatacac
     5761 aaaaggttaa aaatgtatta ctagaaggat ttagtaatgc tactaaagaa gataaaaatc
     5821 tcaatttcaa tcacttactt tttgccgtat tatttgtcag ctttgctctt gttttatttg
     5881 taccacaaat ttatataaga aatcaaattt actatcttag ccgagaaatt gccactttaa
     5941 gagtagaaga aagcgtactt gatgaagaaa ataaagattt aaaaagacgc ttagaaatca
     6001 tgcgctttca aaatcaaatt ttagattatt tagaatgaat gattttttct aaaacatatt
     6061 gttctaaatt tgcctttgga atttcttctt ttaaggcttc tttataaaaa tttccagcca
     6121 taatagaata tttttcatat gaaaaataag gaaagtgcaa agcccatgct ttttgtatta
     6181 atttttttga aatcatttta cgagcataaa ccttaaaaat atcataagaa ataaaaacac
     6241 atgcggtaac cgctacagcg ctgataatac tgatatgaaa atcaaggcga gtaaaaagat
     6301 aatgcgtaat gagtaataat ggtaataaaa ccaaagcaca aaaaattcca aaatatatat
     6361 aagaatttaa aattttaaaa ttaaaattaa gcttagaagg atccacaagc attccatcat
     6421 taaacaaagc attagcctca agcaaatcac gcaaaagaac aggttgatcg gatatcttaa
     6481 aaagaaaatt acaactaaaa tctttaaatt ttttcatatt tttacacttt taaattttta
     6541 gtttaaaata ctatctaaag aaaattaaat ttgggttaaa acaaaagctc ttagcttttg
     6601 tttatcaact cttctgtgat tctggcaatc tcaagttctt catctgtagg aacgataaaa
     6661 atctttacct tagaattggc agtactaatc attctttcac agcttgcttt tttgttgttt
     6721 aattctatat caagctcaac accaagatga gataatcttt cacaaacttt ttggcgaact
     6781 aaagcagcat tttcacctat accgcctgta aaaataatag cgtcagttct aggtaaaacc
     6841 gtaaaataag cccctatata ttttaaaagg cgataacaaa acatatcaaa agctaaacgc
     6901 gccctatcat caccttgctc gatttttgct cctatatctc taaaatcgtt agaaccgcaa
     6961 attccataaa gtccgctttt tttattaagc aaagtatcaa tttcttctat tgttaaaccc
     7021 ttaagatggc taataaatgg caaaattgca gggtctaaat caccacagcg agttcccata
     7081 acaagacctt caagaggagt aaaacccatg gaagtgtcta tacttttacc tccctcaata
     7141 gcacaaacac tcgcaccatt tccaagatgt gctgaaattg cgtttaaatc ctctttattt
     7201 tttccaagta attgggctgc cctagcactc acaaaagcgt gagaagtacc atggaaacca
     7261 tatcttctta tattgtgctt atcataaaaa tcataaggca aagcatacat ataagcaaaa
     7321 tcaggcatag tgcgatgaaa agctgtatca aaaatagctg cattagcaac actaggtgca
     7381 gctttgatca ttgtttttat acctgctaaa tgcgcaggat tatgcaaagg agcaaaaata
     7441 ctaaccctat ctatctcttt aagaacataa tcatccacta aacaatgctc gcttaaattt
     7501 cttcctccat gcactatgcg atgaccacag ccatctaaag catttaaatc ttccaaaatt
     7561 ccagattctt taaaaagctc gttgacaatt tgcaatccat gttcgtgatt ttttatagga
     7621 agttctcttt cgaatgtttc atcatttaag gcatttttta gtatgacttt tgatttttct
     7681 tctccaattt tttctaccaa accactggct ttaaccactt tatcatcaaa aaatttaaat
     7741 ttaatagatg aagagcctga atttaaaact aaaatcttca ttcactttcc tttcttattg
     7801 tgcttgtata gcacttaaaa taaccgtatc tactatatca tcaaccaaac atccacgact
     7861 taaatcattt acaggttttt taagtccttg caaaatagga ccgattgcca aagcatttgc
     7921 tgttctttgc acagccttat agcaaatatt tgcagcgtca agatcaggaa agatatatac
     7981 atttacatta cctgctatct tagaatttgg cattttttta gcagcagttt taggatcata
     8041 agcacaatca aattgcatag ggccatcgat atttaattct ggatattttt ctttagcaat
     8101 tcttaaagct tctttaacaa gatctacact ctcaccctta ccgctatctc cactagaata
     8161 agaaagcaaa gctatccttg gctcgatacc aaaagacttt gcagtcatag cacttacata
     8221 agcactagtg gcgagttgct cggcatttgg atttggattt acagcacagt ctgcaaaagc
     8281 taaaacctta tcatcaagcc ccataaagaa aattcccgaa acagagtcaa caccctcttg
     8341 agttttgata atctgaagcg caggacgaat agtttcagct gtcgtagtag atgctccact
     8401 taccatagca tcagctttcc cactatgtat caacaaggtt ccaaaataag tcctatcttt
     8461 aaccaattct ttagcctctt caaggctcat tcctttagat tttcttgctt catataacaa
     8521 agtggcaaat tcttcgttat attctgaatg aagcggattg agtattttta ctgcggttaa
     8581 atcaagtgcc aattcatcgg ctttttgttt gatatcttgc tcatcgccca ataaaataag
     8641 atccactaca ctacttttaa gtaaaatttc aactgctttt aaaattcttt catcattgct
     8701 ttctggtaaa acaacggttt ttttattttt aacacttttt ttaatgagtt catatttaaa
     8761 acgatgcgga gtcataaaat cataagcttg caacttatgc atttcttcaa aattaaaatt
     8821 ttcattaatc aaagcataat ctctaccatc taaagcttca tcaaaatatt tttgagctat
     8881 taatttatcc tcattattaa taatagccgc tataggagtg ttaagatttt tagccaattt
     8941 tatactcaaa tcaaaaccat caagtattcc aaattcgcaa aaactattaa caagaacaaa
     9001 atcatattta cgatttaatt cctcatactc ttctaagata gtattgaaaa aactatgcgg
     9061 atctttgcta aattcttcca tagcttctct aaaagtaaaa ctataagcat ttttcaaagt
     9121 ttgcttaata tcaaattcct caagccatcc ttgcaaaaca gggatacgat gtacataaat
     9181 cacgggacag taaatagcta tatttttata tatcttgcta tagtttttca ataatttcgt
     9241 ggtgactaat gtatttaact catcactcct agatctcatc aaataaagat ttgccattat
     9301 tttctccttg gttttaaaaa gtggaacact ctttgcttta tacttacttg aaaaactatt
     9361 ttaacaaata aaaatgaaat ttcatcattt aaaggacgaa aatgaaaaaa gttttattct
     9421 atgtgttacc ttttgcattt tttggatgtt ctgcaacagt agatccgcaa atttctatga
     9481 aacctcctgc ttatgtagaa gagcttgcac ctaaacaaag caacaatgta gaaacttctc
     9541 ctggatcgct ttttggaaaa ggcgataatc ctttattctc tgataaaaaa gcaatgaatg
     9601 taaatgattt agttactgtg gttatccaag aaagcactac tcaaagcact caagccaata
     9661 aggccacaag tagaaccaat acttccaatt taggaggagg agctttaaca ggtggaagtg
     9721 gcttacttgg aactgcgatc gataaagtaa atgcttattc taatataggc tttcaaacca
     9781 atagtactaa caactaccaa ggaacaggca ctcaaagtcg caatgaaagt tttaacacta
     9841 cgatttcaac tcgcgtgatt aaaattttgt ctaatggtaa ttattttatt gagggttcaa
     9901 gagagctttt gatcaatgga gagaaacaaa tcatacaact tagcggtgtt attcgtcctt
     9961 atgacatcgg tcaagataat actatagata gtagatatat agcagatgca aaaattcttt
    10021 acaaaactga aggtgaagtg gatagaagca ctagaaaacc ttggggaagc aaagtcatag
    10081 aagctatatg gcctttttaa ataaacttat aatttaagtc cttaaaataa ggacttaagt
    10141 tttattgcga ttttatttta aatatctata attaaaataa aatctattct tttatctctc
    10201 tactcttaac ctcatcttct acttcagcta aaaatctatc cacaagctcg ttttctttga
    10261 gttttgccac cacttctcca tgtcttataa caagtccttg attttttcca aaagctatag
    10321 ccacatcagc gcccttagcc tcacctaaag cattaacaac acagcccata acactgatat
    10381 ttagaggctc tttaatatgt ttagtttttt cttctacgat tttaatagca ctgattaaat
    10441 cactttgaat tcttccacaa gttgggcatg agatgatatt aactccactt ttttgcaccc
    10501 cgctatcttg taaaattgct cttgcaactt tgatttcttc ttcgagctca cccgtcattg
    10561 aaactctcat ggtatcacct atacctttaa gaagcaaatt tcccaaagcg atagaacttt
    10621 ttattgtgct atgaaattta gtccctgctt ctgttactcc taaatgaaaa ggataatcac
    10681 aaagcggtct taatctttca taggcttcta tggtcttttg agcatcagag gttttcattg
    10741 aaatttttat atcaaaaaaa tccaaatcct ctaaaagctt gatattatac aacgcgcttt
    10801 ctagcattgc gtctacgcca tatccatatt tatcactgaa ttctttttct atagaaccgt
    10861 gatttacgcc tatacgtata ggaatacctc gctccttgca agcttttacc acgtctttaa
    10921 tattttcttt tgagcctata ttgcctggat ttatacgaac tccatcaata aattcagcac
    10981 aaaatacagc taaattgtga ttaaaatgta tatctacgat caaaggcaaa ggactttttg
    11041 ccttaatctc ttttaaagct cttgcatccg ccatatccaa acatgccaaa cgcacgatat
    11101 tagctcctgt aaaataaagg cgattgagtt gctctaaaga tccttcaata tctcttgttt
    11161 tagtaaaaag catggattgt actgaaatag gtgcatcacc acctattaaa acatcaccta
    11221 ctttaatttg tcttgtttta aatcttttat attccatttt taagcttctt tattataagt
    11281 aattttaaaa ttttagctat tttttgcttt aattatagtt taattttgtt agaattttaa
    11341 aatagatttt agtataacac aataaatttt taaagggaaa ataatgcaat ttatcacaaa
    11401 aggtggagtt atttggttaa ctggcctagc gggaagtgga aaaagctgca ttgcagaagc
    11461 tttatatcaa aaattaaaag aaaaatatga caacattatt tatcttgacg gtgatgaatt
    11521 tagagagctt ttaggatatt ataaatatga taaacaaagt cgtattgaag tatctataaa
    11581 acgttcaaaa tttgcacatt ttctcagctc tcagaatatg ttagttatcg taagtgctat
    11641 ttccatgtgg gatgaaattt atagatataa taggaaaact ttaaaaaact attatgaaat
    11701 ttatattaag tgcgatatcg aagagttgaa gaagcgtgat aaaaaaaggc tttatagtaa
    11761 agcattaagt gggaaaatat ctaatgtagt gggcatagat ataaattatg atgagcctaa
    11821 tgccgatctt atcttggata attctaagct tgatttactt gatgaaaaag tcgatagaat
    11881 tttgcaagcc ttaaacacat aaaaataaat ttaaaaaaga tagggagagg gatatcttgg
    11941 aacaaatttt aaaaatttta aaacaaatgt taagtcctga tcaggcacaa attctactta
    12001 aagcattaaa aaattcaaat aatgaaaatt tttataactt tgctttagaa aatattgaaa
    12061 tcatctgcga atggctaaat tctaaagaat ttcaagaaaa ttataccaat cacccttatc
    12121 cacctttact aaatccaaat tatatcgata cagatgcaag taggcattgt gcagaattag
    12181 cttgggattt aaatttaccc ttacctaaac attataaatt tatctatatt tctccacatg
    12241 gcgtaggtgc tgcagccttt ttaagatacc tgaatgaagc atgtaatgtt ttttgtcttg
    12301 cttcttggat gttaccctat gacgcaaagg aaagatattg tattaattac atgtgcctaa
    12361 atgataaaaa tatatccgat caagccataa acatttcgga actaaatata attaatcttg
    12421 aaaagtattt ggctttattg gatcctcatt caaaagtgat ctgtggaatc cgtgatccga
    12481 taggaatttt aaaacataat tggggaagag actggagtaa agttcaaaga aactttcaaa
    12541 atgaatttga tctaacttat gactatagaa attatattaa ttttttaaac cataaaaaac
    12601 ctgaaataaa a
//
LOCUS       DAQUWA010000049        12575 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.049, whole genome shotgun sequence.
ACCESSION   DAQUWA010000049 DAQUWA010000000
VERSION     DAQUWA010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12575
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.049"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            95..379
                     /locus_tag="R8X70_001286"
     CDS             95..379
                     /locus_tag="R8X70_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929059.1"
                     /translation="MKKNFFLLALLLGFFITSAFAGNTDSIGAKGLWDIVSGWLNDTY
                     VSRIIALLLFCVGVWRAFAGSILQFFLMLGFAVLVTQGSTIIETINSATF"
     gene            461..766
                     /locus_tag="R8X70_001287"
     CDS             461..766
                     /locus_tag="R8X70_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraL"
                     /protein_id="HEF2929060.1"
                     /translation="MAKTENGYVEINKFIDTKPMFGNWEVDTLAIFCIFIATAIMFAK
                     GLVAYGIIITFGVVAAKYYEKLKKSRVKGFFFHIIYMLGLRQPKTLPPSYMRYFLGA"
     gene            770..1348
                     /locus_tag="R8X70_001288"
     CDS             770..1348
                     /locus_tag="R8X70_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraE"
                     /protein_id="HEF2929061.1"
                     /translation="MLFDKYKNQMDKYIFENITFRIVTLILSFVILVLIWVILARTDS
                     QKVVFMPPKIVNQEFWIAGNQVSKGYLHEMGQFISFNLLNITKENARNNIDNLLTLVD
                     PKFYQEVKTKLLEQMNYIIDNAISRTFFVSAIDADTKGQIKVFGVVKDIISDKVVRSS
                     QSVLKINYIIEQGRFILNDLSIEEEKNNKEKN"
     gene            1345..2157
                     /locus_tag="R8X70_001289"
     CDS             1345..2157
                     /locus_tag="R8X70_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system secretin
                     TraK"
                     /protein_id="HEF2929062.1"
                     /translation="MKKVILSALTLSTSLFAINVIDNPSSDIININVSNSSVNRIVLP
                     TQILDVAYSKEKGIDIKISGNQAFIKFLPIQKEQVRSVGKDRYEPVGEPEIVYDKAKG
                     SEVFFVTANRTYSFALNPKNMDAETVIINDFSAQKDEILKYESDDPYMSTMAKITESI
                     LKGGVPQGYKIKKINKVASSDKTLTTRELTNYDGLLYKATLLEVENKTDKAIRLNPKD
                     YISIAKEAPKAISIYYNNEVNHLLPYSKAQIIIITKGGRNTNGGVFDGGMSK"
     gene            2154..3494
                     /locus_tag="R8X70_001290"
     CDS             2154..3494
                     /locus_tag="R8X70_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraB"
                     /protein_id="HEF2929063.1"
                     /translation="MKNPFIKFFSNDKSPIDAQKTQNKNKVLIFTGVFVIAGALLFLV
                     GGGDKKESKEKVGNFNLVQDDPMAKTRWVGEASDDLTLAKKRVDNLDTRNKELSKQVS
                     DLKKIVTDMKKENDANKRNYELNLKNMQEAQKKAMESTPATVLEDTPNNKEEDLYKNF
                     PQPNKNAANTQKPSDYGLTHFGDVPELNEVTQTRYTPIQDSLSFTNIAKPEEKEKVEK
                     KSTRHVIPTGSIVKAVLLSGMDAPTMTQAKTEPLPVLMKVTDLSILPNRWGYDINECF
                     LMGEGYGDLTSERAYIRVNNISCVTNKGQKIDMAMKGAATGEDGKLGLRGEVVTKQGA
                     LLARTLIAGFLQGVGEGFANQNQIVTQNGFGGTTTTNSDMSASATLQAGAFKGLSKSA
                     EKLADFYLKMADQVSPVIEIAAGREINIITTATLELKTLEEQQQDSAKKNNNKK"
     gene            3507..4271
                     /locus_tag="R8X70_001291"
     CDS             3507..4271
                     /locus_tag="R8X70_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEF2929064.1"
                     /translation="MKIFSKIILGSLALASLLHAQTLIEQQEESLVKGVIPSTKIAKV
                     ERSQIDGFYKAYLDNGNILYVNPFKRVIFIGELYTNTGVSLTANDRDAWQSEVSAKQA
                     KDLNLKEVTQYAKKVDFGKGSKKYEFVLFTDPECPFCARVEELFIKKDVSVYVNFFPL
                     SIHPHAEQWSKEILSAPDFKEALIKLRETQKDLEVKITPQAEQTLKNMRELGEKLNIM
                     GTPKLLVVDKKKKKIIDVIDGANMQKINSYLDKDKQ"
     gene            4268..5263
                     /locus_tag="R8X70_001292"
     CDS             4268..5263
                     /locus_tag="R8X70_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEF2929065.1"
                     /translation="MIKNGVITLSLAASIFLGACSMLPYKENFSCEKGKDNGMCGSVI
                     EVYDLSSDMDELRKKTDREYEQKHPEVKAEAKTKAEQEARDSFRTLKLQEMVESVEIR
                     KIQNETPTIFRYYLSEEEASNKADVALISENDKESKAIRKDLKNQTKKANSQTNKNTK
                     NGKNTHLKHSNKSASKNDSKIKNNANKETNINKLYDGIKIYDNNESGIKDANLTNKEG
                     NASSVNTLDINSTKSNTEQNLSTANTNGIDKNSQVANEPAIDCSASSDSKITQINGKV
                     KVCVYHANIREMPSCKALVLRVANQGEELEALYEQGGWIKLKDGTYVHKSIVTKD"
     gene            5232..5735
                     /locus_tag="R8X70_001293"
     CDS             5232..5735
                     /locus_tag="R8X70_001293"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEF2929066.1"
                     /translation="MYIKASLQKISLVSLALAFSLTNLSAKEAQTSEYDNNLLLKKAV
                     LKLYRENQELEKRVAVLEEKLGISRPEQNASVVNPKPLDQNAFVFLSRVKDEFRKGRK
                     IVLGQAIKDTKYYSKPSISSRVVGNVAKGKRIIIKGVTEQNGNAWYKIEDWMYIDASA
                     VSFRSKK"
     gene            5732..6178
                     /locus_tag="R8X70_001294"
     CDS             5732..6178
                     /locus_tag="R8X70_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929067.1"
                     /translation="MNKKSILILCATLLFTACASKQQITKEPSVDAQLKLLVDGGMKY
                     TDLDKQDEDELIRGLLKNSPSFAQSNQQSAVKENMVKLPNNMPLFRQPLFAQMVVFPY
                     VSDDGIYHGYSESWLKIKEGEFVLSDPRSKQDPSERIFDMNDVGTK"
     gene            6175..8703
                     /locus_tag="R8X70_001295"
     CDS             6175..8703
                     /locus_tag="R8X70_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraC family protein"
                     /protein_id="HEF2929068.1"
                     /translation="MSLSDFINEKLGINQSVKKITSLQTNVWNACMQRYKFSDFLPYM
                     SYDSQKEYYINNDNSFGTVFLCSPRIRMGESTAVAVEEMLGKLPENMFIQFTLFGSKN
                     IKDIVEYWKYMHLERADRENNELLFKAIKNMEEFYYSKTKEGISSSMTTRLKNYYLLV
                     SIKSNSEEDVISYKHILKNILTSNNFSPVVAEPEVLKPMLYELFNGNHDINNIPNYDR
                     TCYLNRQVIMPTTEILIKDDELKIDGRSFISLTPQSFPQEAHIGDFGEKLGDYISRAL
                     DNNQFKDTFLITASVCALSKKKTARVKDNHSMLLTQKWSENIFRQFAAARKESVSILE
                     RIDNQKEKLYAFDLNVIVSGDNYNEASLNASTIISYWNKGGSKAIVLDEALGIHQLNL
                     IASLPMGINKEYMFDITVKYRSMFPDQISQFIPLEADFKLNIPNLILFSRRAQIAGLD
                     LFVSSSNYNAYLVATSGVGKSVLLNMLAFNSYARNDRIFIIDQDNSFINICDAVGGQY
                     LALDPSKPISFNPFSGLKNNDRDSFAEDLEYLSRLIYMLGSSKNQDRALEDERLIKAK
                     TQAIMEELFLSKGNTMEVTDIRDELAKVDDQRFRDFADQLRPFCKEGIYGKYFNGPCE
                     FNIEKEFIVTEFKGLEGYDDLKDPLIMLLIYHINQLMYMSTDRKSRIQIIIDEAHRFL
                     GKNPKMDDFIEQAYRRARKYGASAIIATQGFDDIYNAKDGGLSRAGTVIVNNSAYKIF
                     MKQTETSVNMLIKSEVFSLSETDKEILRSIRTIKGEYSELFLMTPDDVKLPYRLVLDK
                     YFYYLTTTDATDKAKIKELTDQGIPLGEAIDLLANTKTKSNEAK"
     gene            8657..9193
                     /locus_tag="R8X70_001296"
     CDS             8657..9193
                     /locus_tag="R8X70_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S26 family signal peptidase"
                     /protein_id="HEF2929069.1"
                     /translation="MIYLPILRQKAMKLSKNQIRTLINKALFVLIAFIIGNIVVSALS
                     QFYGIGVIHTKSIDKDVFIYQKKFQGDLKDSLIYFSLPVQTRYFDKDSNFGKYVRCEE
                     GQTLSVKDLKYYCDNVFLGIAQKTDKDGNKVEQFIFNGVIPKDKFFVMGTHPRSFDSR
                     YWGFVDRKDIKGVSIWAF"
     gene            9181..10647
                     /locus_tag="R8X70_001297"
     CDS             9181..10647
                     /locus_tag="R8X70_001297"
                     /inference="COORDINATES: protein motif:HMM:NF017892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraH"
                     /protein_id="HEF2929070.1"
                     /translation="MGILKKRVIISAIACAFLLPSALNANLSSFIQNNLGSSITSENS
                     GYYKSQVSGFISGGSSRIRWGGGETIRPYSVTAPSFNVGCSGIDMIFGGFSYLNFEYL
                     VEKLKKIASAAPAYAFQMALSTLCKDCQTIMDELEKIANAINSMNFDTCQMTTNWTNK
                     FGKMLSSNTESGQNDSWLTSFAKGMEGTAQTVQNFAKEANAFVNGTTPDKSGETNAAK
                     ILKQGSIIQKIIEKGKASFFADAFGENQYEDILRGVFGDLVAYTEKSTSITNKKMSDP
                     EKVMLIGPTLNTDKFIEALWNKNGENKSITLEFTAYTINKDENGLYQEPVGKETKVTI
                     DKDIRSLLIEKFKAIVAKIKAKTSLDDADKNLINAAPLPVADILNIEASTGLNGDAVY
                     EFVALLMVDAFVNELFNEFITNINTVQGLDPKFSSDHKDDLAKFNAAVAKVQETTRAL
                     LSENAQAIIRDNQQVDSIRKIISNFYGVSDIFNYGTGR"
     gene            10656..11846
                     /locus_tag="R8X70_001298"
     CDS             10656..11846
                     /locus_tag="R8X70_001298"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929071.1"
                     /translation="MRKYLFLIFVVCNFLQAANNAAAEGNSFGSQLNNYFKSNADAAI
                     NSLTNGGEIRTVDGKQKANVQMTCDESKSGEFLNIDYTGTSDINIKIKFDKNVDGKVD
                     KIWSFDNVSGICTNGVVKCDKNSWNNCEYFQYNYGDNINLVKTTIDNLNGCYCINSSC
                     GSAAAKNRDKILSDIAGPIYSALSAKTQLVLSKTTKVGSALSYRGQDYSVCDNYGQAV
                     NIDSSSNLEGLGQELAASQSNNENSVYSVFHKGTDNTVPKDENFNNKVSNSSVSIDQS
                     AKYSKGSSKIDFSYIDTTSGKNVAGDMQATPDVDAKFCEVNVAKEDTSAFNDGTNREN
                     STNNTTVYQSEIRECTNNWTKCPVNGKNETLKHDCGKINDMGEALAQLSALDEASKDM
                     VCSK"
     gene            11834..12190
                     /locus_tag="R8X70_001299"
     CDS             11834..12190
                     /locus_tag="R8X70_001299"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929072.1"
                     /translation="MFKIKTTPKVVSLWSRALQKAVSYFLDLKNIFLISSLKSVINTA
                     VTAMNVFRKSIVDSFLGVISSRIPNLIAKKKARPFLRIELLSHLQGSVKPLLSIYLMD
                     KNIITQNSKKGNDENI"
     gene            12263..>12575
                     /locus_tag="R8X70_001300"
     CDS             12263..>12575
                     /locus_tag="R8X70_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraN"
                     /protein_id="HEF2929073.1"
                     /translation="MKNYNLLRFFSKNTSVEQITPKTLRLAILLSASLSFSQAAIQCT
                     DYNDFKQFNGHYYTATVQKMTFEDARKLAEDSGGYLAIPDSKAENDFLSSLFRGGQYA
                     WI"
BASE COUNT         4681 a         1636 c         2263 g         3995 t
ORIGIN      
        1 agatatatta tataaaaata tatcctgttt taagtatata aaagaagctc caatctgggc
       61 taagagctac acaagtccaa attgtgaggt ttttatgaaa aagaattttt ttctcctagc
      121 tttacttcta gggtttttca ttacaagtgc ttttgcagga aatactgata gtattggtgc
      181 aaaagggctt tgggatattg taagtggttg gttaaatgat acttatgttt caagaattat
      241 agccttgcta cttttttgtg ttggcgtttg gagagctttt gcaggttcaa ttttgcaatt
      301 tttcttaatg ctaggttttg cagtacttgt tactcaggga agtacgatca ttgaaactat
      361 caattctgct acattttaat aaaaagggtg taaaaaccct tttttatttt tcttgagatt
      421 ttttaatgaa atttcaataa atataaaaaa ggagttaatt ttggcaaaaa ctgaaaatgg
      481 ttatgttgaa ataaataaat ttatagatac aaaacctatg tttggtaatt gggaagttga
      541 tactttagct atattttgta tatttatagc tactgcaatt atgtttgcta aaggtcttgt
      601 tgcctatgga ataattatta cttttggggt tgtagctgca aaatattatg agaagttaaa
      661 aaagtcaaga gtaaaaggtt ttttctttca tatcatttat atgctaggtt taagacaacc
      721 taaaactttg cctccttcgt atatgagata ttttttagga gcttagaaaa tgttatttga
      781 taaatataaa aatcagatgg ataaatatat atttgaaaat attaccttcc gtattgtaac
      841 gcttatttta tcctttgtta ttttagtgct tatttgggta attcttgcaa gaacagactc
      901 gcaaaaagtt gtatttatgc cgccaaaaat tgttaatcag gaattttgga ttgcgggaaa
      961 tcaggtttcg aaaggatatt tgcatgaaat gggacaattc atatctttta accttttaaa
     1021 tattaccaaa gaaaatgcaa gaaataatat agacaacttg cttacacttg tagatccaaa
     1081 attttatcaa gaagtaaaaa caaaactttt ggagcaaatg aattatatta ttgataacgc
     1141 aattagtcgc actttctttg tttctgctat tgatgcggat acaaaaggac aaattaaagt
     1201 atttggagtg gttaaagata ttatatccga taaggtggtt cgctcatctc aaagtgtttt
     1261 gaaaattaat tatattatcg aacaaggaag atttattctc aacgatcttt ctatagaaga
     1321 agaaaagaat aacaaggaga aaaattgaaa aaagtaatat tatcggcttt gactttaagc
     1381 actagcttat ttgctattaa tgttattgat aatccttcga gcgatattat caatattaat
     1441 gtttcaaata gcagtgttaa tcgaattgta ctacctactc aaattttaga tgtagcatac
     1501 tctaaagaaa aaggtataga tattaagatc tcaggaaatc aagctttcat taaattccta
     1561 cctatccaaa aagaacaagt tagaagtgta ggaaaagata gatatgagcc tgtgggtgaa
     1621 cctgaaattg tttatgataa agcaaaaggt tctgaagttt tttttgtgac tgcaaataga
     1681 acctattctt ttgcattaaa tcctaaaaat atggatgctg aaactgtaat tattaatgat
     1741 tttagcgcac aaaaagatga aattttaaaa tatgaaagtg atgatcctta tatgtccact
     1801 atggcaaaaa taactgagag tattttaaaa ggtggagttc cacaaggata taagattaaa
     1861 aagattaata aagttgcttc aagcgacaaa accttaacca caagagagct aactaattat
     1921 gatggtctgc tttataaagc aactttactt gaagttgaaa acaaaactga taaggcaata
     1981 agactaaatc ctaaagatta tatttctatt gcaaaagaag ctccaaaggc tataagtatt
     2041 tattacaaca atgaagtaaa tcatttatta ccttattcta aagcacaaat tataatcatt
     2101 actaaaggcg gaagaaatac aaatggcggt gtatttgatg gggggatgtc aaaatgaaaa
     2161 atccttttat aaagtttttt agcaatgata aaagtcctat cgatgcacag aaaactcaaa
     2221 ataaaaacaa ggttttaatt tttacaggtg tttttgtgat tgcaggagct ttactttttt
     2281 tagtaggcgg tggcgataaa aaagaatcta aagaaaaagt aggcaatttt aatcttgttc
     2341 aagatgatcc tatggctaaa acaaggtggg taggtgaagc aagtgatgat cttactttag
     2401 ctaaaaaaag agtggataac ttagatactc gtaataaaga actttcaaaa caagtcagtg
     2461 atcttaaaaa aattgtcacc gatatgaaaa aagaaaatga tgcaaataaa agaaattatg
     2521 aattaaattt aaaaaatatg caagaagcgc agaaaaaagc tatggaaagt actcctgcaa
     2581 ctgttttaga agacactcca aataataaag aagaagattt atataagaat tttcctcaac
     2641 caaataaaaa tgcagcaaat acacaaaaac caagtgatta tggcttaaca cattttggtg
     2701 atgttcctga attaaatgag gttacacaaa caagatatac accgattcaa gattctcttt
     2761 cttttacaaa cattgctaaa cctgaagaaa aggaaaaagt agaaaaaaag tcgactaggc
     2821 atgtcattcc tacaggctcg attgtaaaag ctgttttact ctcaggtatg gatgccccta
     2881 cgatgactca agcaaaaact gagccgttgc ctgtactcat gaaagttact gatctttcta
     2941 ttttaccaaa tcgatggggt tatgatatta atgaatgttt tttaatgggc gaaggatatg
     3001 gggatttaac aagtgaaaga gcatatatta gagttaataa tatttcttgt gttactaata
     3061 aaggacaaaa aattgacatg gcaatgaagg gtgctgcaac cggtgaagat ggcaaattag
     3121 gcttgcgtgg tgaggtagtt accaagcaag gagctttgct tgctaggact ttaattgcag
     3181 gttttttaca aggcgtagga gaaggttttg ctaatcaaaa tcaaatcgta actcaaaacg
     3241 gttttggtgg aactacaaca acaaatagtg atatgagtgc gagcgctact ttgcaagcag
     3301 gtgcatttaa agggctttca aaaagtgccg aaaaacttgc agatttttat ctaaaaatgg
     3361 cagatcaagt ttcccctgta attgagattg cagcaggtag agaaattaac attatcacca
     3421 cagctacttt ggagttaaaa accttagaag aacaacaaca agatagcgca aagaaaaata
     3481 acaataaaaa ataaggagaa aaatacatga aaatcttttc taaaataatt ttaggctctt
     3541 tagctttagc aagcttactt catgctcaaa ctcttattga acaacaagaa gaatcattgg
     3601 ttaaaggtgt tattccttca acaaaaatag ctaaagtaga aagaagtcaa attgatggat
     3661 tttataaggc ttatttggat aatggaaata tcttatatgt taatcctttt aaaagggtaa
     3721 tatttatcgg agaactttat acaaatacag gtgtaagttt aacagccaat gatagagatg
     3781 cttggcaaag cgaagttagc gctaaacaag ctaaagactt aaatttaaaa gaagtcacac
     3841 aatatgctaa aaaagtagat tttggaaagg gttctaaaaa gtatgagttt gttcttttta
     3901 ccgatcctga atgtccgttt tgcgcaagag tagaagagct ttttatcaaa aaagatgtta
     3961 gtgtttatgt aaatttcttt cctttaagta ttcaccctca tgctgaacaa tggagtaaag
     4021 aaattttatc tgcgcctgat ttcaaagaag ctctaattaa acttagagaa actcaaaaag
     4081 atttagaagt aaaaattact ccacaggctg agcaaactct taaaaatatg agagaattag
     4141 gtgaaaagct aaatattatg ggtactccaa aacttttagt agtggataaa aaaaagaaaa
     4201 aaatcattga tgtaattgat ggagcaaata tgcaaaaaat caattcttat ttagataagg
     4261 ataagcaatg attaaaaacg gtgtaattac attatcttta gctgcctcta tctttttagg
     4321 agcttgctct atgttgcctt ataaagaaaa cttttcttgt gaaaaaggaa aagataacgg
     4381 aatgtgtggc tcggtgattg aagtgtatga tcttagttct gatatggatg agcttagaaa
     4441 aaaaacagat agagaatatg agcaaaaaca tcctgaggta aaagctgaag caaaaactaa
     4501 agctgaacaa gaagcaagag atagttttag aaccttaaag cttcaagaaa tggttgaatc
     4561 tgtagaaatt cgtaaaattc aaaatgaaac gcctactatt tttagatact acttaagcga
     4621 agaagaggca agcaataaag ctgatgtcgc tttaatcagt gaaaatgata aagaaagcaa
     4681 ggcaattcga aaagatttga aaaatcaaac taaaaaagca aattcgcaaa caaataagaa
     4741 tacaaaaaat ggtaaaaata ctcatttaaa acattctaat aagtctgcat ctaaaaatga
     4801 tagcaagata aaaaataatg ccaataaaga aaccaatatt aataaacttt atgatggcat
     4861 taaaatctat gacaataacg aaagtggaat aaaagatgca aatcttacaa ataaagaagg
     4921 taatgcaagc tcagtcaata ctttagatat aaattctacg aaatctaata ctgaacaaaa
     4981 tctttcaact gcaaatacaa atgggattga taaaaattca caagttgcta atgagcctgc
     5041 tatagattgt tctgcaagtt cggattcaaa gatcactcaa attaatggca aggttaaagt
     5101 ttgtgtttat cacgcaaata ttagagaaat gccttcttgt aaagctcttg ttttaagggt
     5161 ggctaaccaa ggcgaagaat tagaagcttt gtatgagcaa ggcggatgga ttaaattaaa
     5221 ggatggaact tatgtacata aaagcatcgt tacaaaagat tagtttagta agtttagctt
     5281 tggctttttc tttaacaaac ctaagtgcta aagaagctca aacaagcgaa tatgataata
     5341 acttgttatt gaaaaaagct gttttaaaac tttatagaga aaatcaagaa cttgaaaaaa
     5401 gagtagcagt tttagaggaa aaattaggca tttcaagacc tgagcaaaac gcttcggttg
     5461 taaatcctaa acctttagat caaaacgctt ttgtattttt atcaagggta aaagatgagt
     5521 ttagaaaagg tagaaaaata gttttagggc aagccattaa agatacaaaa tactattcta
     5581 aaccttcaat ctcatctagg gtagtaggta atgtagctaa aggtaaaaga attatcatta
     5641 aaggcgttac agaacaaaat ggcaacgcat ggtataagat cgaagattgg atgtatattg
     5701 atgcaagtgc tgtttcattt aggagtaaaa aatgaataaa aaatctatat taattttatg
     5761 cgcaacgcta ctttttacag catgtgcaag taaacaacaa atcactaaag aaccaagtgt
     5821 tgatgctcaa ttaaaattac ttgttgatgg tggtatgaaa tatacggatt tagacaaaca
     5881 agatgaagat gaacttattc gtggattgct taagaattca ccttcttttg cacaaagcaa
     5941 tcaacaaagt gcagtaaaag aaaacatggt gaagttgcca aataatatgc ctttgtttag
     6001 acaaccttta tttgcacaaa tggttgtttt tccttatgta agtgatgatg gtatttatca
     6061 cggctatagt gaaagttggc taaaaatcaa agaaggcgag tttgttctta gcgacccaag
     6121 aagcaaacag gatccaagtg aaagaatttt tgatatgaat gatgtaggta caaaatgagt
     6181 ttaagtgatt ttattaacga aaaattaggt atcaatcagt ctgtaaagaa gattacttct
     6241 ttgcagacta atgtgtggaa cgcttgcatg caaagatata aattttcaga ctttttacct
     6301 tatatgagct acgattctca aaaagaatat tatattaata atgataattc ttttggaaca
     6361 gtttttttgt gttctccaag aattagaatg ggtgaatcta ctgctgttgc tgttgaagaa
     6421 atgctaggca aattgcctga aaatatgttt atacaattta cactttttgg aagtaaaaat
     6481 atcaaagata tagttgagta ctggaaatac atgcacctag aaagagctga tagagaaaat
     6541 aatgagcttt tgtttaaggc aattaaaaat atggaagagt tttattattc caaaaccaaa
     6601 gaaggtattt caagttctat gactacaaga ttaaaaaatt actatctttt agtttctata
     6661 aaatctaata gcgaagaaga tgtaatttct tataaacata ttttgaaaaa tattcttact
     6721 tcaaataatt tttcacctgt tgtagctgag cctgaggttt taaaacctat gctttacgag
     6781 ctttttaatg gtaatcatga tattaataat attccaaatt atgataggac ttgctatctt
     6841 aatagacaag ttattatgcc tacaacagag attttaatta aagatgatga attaaaaata
     6901 gatggtagaa gttttattag tttaacacca caatcatttc cgcaagaagc acatattggt
     6961 gattttgggg aaaaattagg tgattatatt agtagggctt tggataataa tcaattcaaa
     7021 gatacttttt taattactgc ttctgtttgt gctttatcta agaaaaaaac cgcacgagta
     7081 aaagataatc attctatgct tttgacacaa aaatggagtg aaaatatttt tagacagttt
     7141 gcagcagcca gaaaagaaag cgtttctata cttgaaagaa tagataatca aaaagaaaag
     7201 ctttatgctt ttgatttgaa tgttatagtt agtggtgata attataatga agcttcttta
     7261 aatgcaagca ctattatttc ttattggaat aaaggcggta gtaaagctat tgtgcttgat
     7321 gaagctttag gaattcatca acttaatctt attgcttctt tacctatggg gattaataaa
     7381 gaatatatgt ttgatattac tgtaaaatat cgttctatgt ttcctgatca aatttcacaa
     7441 ttcattcctt tagaagcaga ttttaaactt aatattccaa atttgatttt attttcaaga
     7501 agagcgcaaa ttgcaggact cgatttgttt gtttcaagtt caaattataa tgcttatttg
     7561 gttgctactt caggtgttgg aaaatcagtg ctattgaata tgcttgcttt taattcttat
     7621 gctagaaatg atagaatttt cattatcgat caggataact cttttattaa tatttgtgat
     7681 gcggtaggag ggcaatatct tgcgcttgat ccttcaaaac ctatcagctt taaccctttt
     7741 agcggcttaa aaaataatga tagagattct ttcgcagagg atttggaata tctatcaagg
     7801 ttgatttata tgttgggaag ttctaaaaat caagatagag ccttagaaga tgaaagactt
     7861 attaaagcta aaacacaagc aattatggag gagctttttt tatcaaaagg caatactatg
     7921 gaagttacag atattagaga tgagcttgcc aaagtagatg atcaacgctt tagagatttt
     7981 gcagatcaat tacgcccttt ctgtaaagaa ggaatttatg gtaaatattt taatggtcct
     8041 tgtgagttta atatagaaaa agaatttatt gtaactgaat ttaaagggct tgaagggtat
     8101 gatgatttaa aagatccgct tatcatgctt ttaatctatc atattaatca gcttatgtat
     8161 atgagtacag atagaaaatc aagaattcaa atcatcattg atgaggcaca ccgtttctta
     8221 ggaaaaaatc caaaaatgga tgacttcatc gaacaagctt atcgccgtgc tagaaaatat
     8281 ggcgcttctg caattattgc aactcaaggt tttgatgata tctataatgc taaagatgga
     8341 ggattaagtc gtgcaggaac agttattgta aataactcag cctataagat ttttatgaaa
     8401 caaactgaaa cttctgttaa tatgttaatt aaatcagaag tgttttccct aagtgaaact
     8461 gataaagaaa ttttgcgttc tattaggact ataaaaggag aatattcaga actctttttg
     8521 atgactcctg atgatgtgaa attgccctat cgtttagtat tggataagta tttttactat
     8581 cttactacta ccgatgcaac agataaagct aaaatcaaag aattaaccga tcaaggaata
     8641 cctttaggag aagccattga tttacttgcc aatactaaga caaaaagcaa tgaagctaag
     8701 taaaaatcaa attagaacgc ttatcaataa agctttattt gttctaattg cttttattat
     8761 tggaaatata gttgtttcag ctttatctca attttatgga ataggcgtaa ttcataccaa
     8821 aagcatcgat aaagatgttt tcatatatca aaaaaagttt caaggagatt taaaagattc
     8881 tttaatttat ttttctttac ctgtgcaaac aagatatttt gataaggatt ctaactttgg
     8941 aaaatatgta agatgtgaag aaggacaaac attaagtgtg aaagatttga aatattattg
     9001 tgacaatgtt tttttgggta ttgctcaaaa aacagataag gatggaaata aagtagaaca
     9061 atttatattt aacggagtta taccaaaaga taaatttttt gtaatgggaa cacatcctag
     9121 aagctttgat agtaggtatt ggggttttgt agatagaaaa gatattaaag gagtttctat
     9181 atgggcattt taaaaaagag ggtgataatt tctgctattg catgtgcatt tttgttgcca
     9241 agcgctttaa atgcaaattt atcaagcttt attcaaaata atttaggcag ttctatcact
     9301 tctgaaaatt caggttatta taaatctcag gtttcaggtt ttattagtgg tggtagttca
     9361 agaattagat ggggtggtgg tgaaactata cgcccttatt cagtaactgc gccaagtttt
     9421 aatgtggggt gtagtggtat tgatatgatc tttggtggat tttcttatct taattttgag
     9481 tatttggttg aaaaactcaa aaagattgct tcagctgcgc ctgcctatgc ttttcaaatg
     9541 gcactttcta cgctttgtaa agattgtcaa accattatgg atgagcttga aaaaatagca
     9601 aatgctatta atagtatgaa cttcgatact tgccaaatga caacaaattg gactaataaa
     9661 tttggaaaaa tgctcagttc taatacggaa agtggacaaa acgatagttg gttaacttct
     9721 tttgctaaag gcatggaagg aacagctcaa acggtacaaa attttgctaa agaagcaaat
     9781 gcttttgtaa atggaacaac tcctgataaa agcggtgaaa caaatgcagc taaaatttta
     9841 aaacaaggat caattattca aaaaataatt gaaaaaggta aagcaagttt ttttgctgat
     9901 gcttttggag aaaatcaata tgaagatatt ttaaggggtg tttttggtga tttggtagct
     9961 tatactgaaa aaagtacttc tatcactaat aagaaaatga gtgatcctga aaaagttatg
    10021 ttaataggtc ctactttaaa tacagacaaa ttcattgaag cgctatggaa taaaaatggt
    10081 gaaaataaat ctataacgct tgaatttaca gcttatacga tcaacaaaga tgaaaatggt
    10141 ttgtatcaag aacctgtagg aaaagaaaca aaagtaacca tagataaaga tattcgctct
    10201 ttattaattg aaaaatttaa agctatcgtt gcaaaaatca aggcaaaaac ttctttagat
    10261 gatgcggata aaaacttaat taatgctgca cctttgcctg ttgccgatat tttaaatatt
    10321 gaagcatcaa caggacttaa tggggatgct gtttacgaat ttgtggcgct tttaatggta
    10381 gatgcttttg ttaatgagct ttttaatgag tttataacaa atatcaatac cgtacaaggc
    10441 ttagatccta aattttcaag cgatcataaa gatgatcttg ctaaattcaa tgcagctgtt
    10501 gctaaagtgc aagaaactac aagagctcta cttagtgaaa atgcacaagc tattattaga
    10561 gataatcagc aagttgattc aattagaaaa atcatttcga atttctatgg agttagcgat
    10621 atattcaatt atggaacagg tagataggag aaagcatgag aaaatatctt tttttaattt
    10681 ttgtagtttg taacttttta caagctgcaa ataatgctgc tgctgaaggc aatagttttg
    10741 gttcacagtt aaataattat ttcaagtcaa atgctgatgc ggctattaat tcactcacaa
    10801 atggaggtga aattagaaca gtcgatggaa agcaaaaagc taatgtacaa atgacttgcg
    10861 atgaatctaa gagtggagaa tttttaaata tagattacac aggtacaagc gatatcaata
    10921 ttaaaattaa atttgataaa aatgttgatg gcaaagtaga taagatttgg agttttgata
    10981 atgttagcgg aatatgcacc aatggcgttg ttaagtgtga taaaaactca tggaataatt
    11041 gtgagtattt tcagtataac tatggcgata atattaatct tgttaaaact acaattgata
    11101 atttaaatgg atgctactgt attaatagtt cttgtggttc tgcagcggca aaaaatagag
    11161 ataaaattct ttctgatatt gcaggtccta tctactcagc attatctgca aaaactcaac
    11221 ttgttctttc taagactact aaagtaggca gcgccttaag ttatagagga caggactatt
    11281 ccgtatgtga taattatgga caagcagtta atattgattc atcgagtaat ttagaaggtt
    11341 taggacaaga attagcggct tcacaatcaa acaatgaaaa cagtgtttat tctgttttcc
    11401 acaaaggaac ggataataca gtacctaaag atgaaaactt caataataag gtttcaaata
    11461 gttcagtatc gattgatcaa agtgctaaat attcaaaagg cagttcaaaa atagattttt
    11521 cttacataga tactacgagt ggaaaaaatg ttgcaggcga tatgcaagct actcctgatg
    11581 tagatgctaa gttttgcgaa gtgaatgtag ccaaagaaga tacttcagct ttcaacgatg
    11641 gaactaatag agaaaactca acaaacaata ctacagtata tcaaagtgag ataagagaat
    11701 gcactaacaa ttggactaaa tgccctgtta atggaaaaaa tgaaacttta aagcatgatt
    11761 gtggaaaaat caatgatatg ggtgaagctt tagcacaatt atcagcactt gatgaagcaa
    11821 gtaaggatat ggtatgttca aaataaaaac tactccaaag gtggtaagtc tttggagtag
    11881 ggctttacag aaggcggtta gctacttttt agatttaaag aatatttttc ttatctcttc
    11941 tctaaaaagt gtgattaaca ctgcggtaac cgcaatgaat gtatttagaa aatccattgt
    12001 ggactccttt ttaggtgtga tttcctcccg catacccaac ttaatagcca aaaaaaaagc
    12061 tcgacccttt ttaagaatcg agcttttatc acacctacaa ggctctgtaa aacctttgtt
    12121 gtccatctac ctcatggata aaaatattat aacacaaaat agtaaaaagg gaaatgatga
    12181 aaacatttaa ttgtaatatt gaaattaata aaaataaaac taaacaacca aaattttcat
    12241 tcaatgaaaa aggaaaaata atatgaaaaa ttacaatttg ttaagatttt ttagtaagaa
    12301 tacatcggtt gaacaaatta ctcctaagac attaagactt gctatactcc tttcggcgag
    12361 tcttagcttt tctcaagctg ctattcaatg tacagattat aatgatttta aacaatttaa
    12421 tggacactat tatactgcta ctgttcaaaa aatgactttt gaagatgcaa gaaaactagc
    12481 agaagatagc ggtggctatt tagcaattcc tgattctaaa gctgaaaatg atttcttaag
    12541 ttctttgttt aggggagggc agtatgcttg gatag
//
LOCUS       DAQUWA010000050        12499 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.050, whole genome shotgun sequence.
ACCESSION   DAQUWA010000050 DAQUWA010000000
VERSION     DAQUWA010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12499
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.050"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..1139)
                     /locus_tag="R8X70_001301"
     CDS             complement(<1..1139)
                     /locus_tag="R8X70_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929074.1"
                     /translation="MTINSANPYQNLALSNPLQNSQALNLIKDKKGSNLEENENNLEN
                     LNYIFNTTSYASEFSFRIDEKGFFEKDLNKIANIPESYNINIKSVRNIAKELTRQDAT
                     LNYNKIDLPYLLNSYYSSLKSVNLEFSENDNANLSRDMISKFATGFSTENGEFLGKIS
                     RIYNNQEELNSALNKTLSLNTLMLDNKITNFHFDRALNNTSSNEILKPYLTKNAEVSK
                     SGLLMNFIYHDIKTQNDNELNFFMKPASLDLNAHTNFQKILRGEMDIKDYIKQQNEQK
                     MSFDLYLYVNGVDKKTASQDKLSVFFQQYVNYQKDMDLREFANSSSIFQIYIDENHSE
                     FNSLKEEYQSQNKDLEKLDNANNMRSSSIENFLDRRQKQANLNKI"
     gene            1292..1483
                     /gene="rpmI"
                     /locus_tag="R8X70_001302"
     CDS             1292..1483
                     /gene="rpmI"
                     /locus_tag="R8X70_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEF2929075.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLR
                     TAKYVHSTNVKAVEKMLGI"
     gene            1577..1930
                     /gene="rplT"
                     /locus_tag="R8X70_001303"
     CDS             1577..1930
                     /gene="rplT"
                     /locus_tag="R8X70_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEF2929076.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNDLSYSKFINGLKKAGIELDRKILADLAMND
                     AAAFAKIAEAAKKAL"
     gene            2217..3080
                     /locus_tag="R8X70_001304"
     CDS             2217..3080
                     /locus_tag="R8X70_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HEF2929077.1"
                     /translation="MATDMNEILLRSVEVLPPLPDTINKLRKYINESGSNVKIDEIAN
                     IISSDPLMTAKLLRLANSPFYGFSREITSLAQVVSLLGIGNIVNTIMADSIRDSFKID
                     VSPYGLSTTEFVNKCSEETSFIMDWLGNEDKKLSHLLVPCSMLLRLGIVVFSNFLIQN
                     KKDAEFLARLEKNNFSDLSMVENEFLGVDHISFLGFLLYRWKFDDMLVETICFARSPH
                     AARNEVKKSAYALSVVDHLFTPHNNFSSFNIKASIALINEARSQGIDFNLDNFISKLP
                     KEAKENLIKEG"
     gene            3102..3578
                     /gene="cheQ"
                     /locus_tag="R8X70_001305"
     CDS             3102..3578
                     /gene="cheQ"
                     /locus_tag="R8X70_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HEF2929078.1"
                     /translation="MKSIILPPNEFLDHYVLNAEFHRLAGISKNAYKFWKKVEIGRYQ
                     GTRIIFLHKNSILEKHREVLKQCSDLSGFVLASAFCSFTGLAPSHLVKKNNSSIYKLL
                     DLKEIHGIKFVNLKKFYDFLGLNYYQHIYIEKCHFFSPTPFEKRIKITESMCVGYY"
     gene            complement(3547..4857)
                     /locus_tag="R8X70_001306"
     CDS             complement(3547..4857)
                     /locus_tag="R8X70_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2929079.1"
                     /translation="MRKILSKKDIKTLGLSSLGGTLEFYDFIIFAFFSSYISKNFFPE
                     NLSPFWQLFNTYGIFAAAYVVRPLGGIVMAHFGDKFGRKKMFMLSILLMVIPTFALAF
                     IPSYESIGYLCVVFLMLIRIAQGISIGGELPGAWIFVYEHSPQGQRRTYIGFLTASVV
                     GGILLGSIVFLLMHKIYTQEELYEWAWRVPFFLGGIFGLISIYLRKFLSETPVFEQMR
                     KENVLEKFPLKEVFKRAKAGVLISMLITWVLTGCIIVMILFIPKYMAEILQFDTNFQT
                     YLQMGGIFFISLGCIISGILADKIGIFKSSIIFSLFFGLACAFYFHFLYNTNADITLV
                     SIFYLLACLFGGVMNFCPLIMNEAFEAKIKFSGLSFSYNIAYAIAGGITPQLTLLLHK
                     FAFANLDNAWRFSLGYYMFLIVLLALLSAFIFRYLNNTQRTYSQ"
     gene            complement(4860..5012)
                     /locus_tag="R8X70_001307"
     CDS             complement(4860..5012)
                     /locus_tag="R8X70_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HEF2929080.1"
                     /translation="MAYDDEDLEFDDYEGEEDEYAHNHHKSYNYDDDDYDFDDEANDD
                     DFYEMD"
     gene            5107..5580
                     /gene="moaC"
                     /locus_tag="R8X70_001308"
     CDS             5107..5580
                     /gene="moaC"
                     /locus_tag="R8X70_001308"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEF2929081.1"
                     /translation="MELTHLDENNRPKMVDVSQKDISKRVATASGMISMSEEAFKAIK
                     NNTAKKGPVLQTAVIAAIMGAKKTSEIIPMCHPLMISKVETDIVEFPKDYTFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKTMKISEIVLESKEGGKSGKFVRS"
     gene            5558..5821
                     /locus_tag="R8X70_001309"
     CDS             5558..5821
                     /locus_tag="R8X70_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HEF2929082.1"
                     /translation="MVNLCDLKQEPIVNYPTFWDYKVIFEAHVHAGALFEELLGQRDF
                     KYKHSNASSSGKYQSFLLSVYVDSKKDRLDIFEKLKAKAKFVL"
     gene            5836..6972
                     /locus_tag="R8X70_001310"
     CDS             5836..6972
                     /locus_tag="R8X70_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929083.1"
                     /translation="MKNTLIIFENSLSNLKKDEVKDLLEDLSFNLAYKQISQDPHSTK
                     KILNSLLVEFLTILKKLDLFDDENVAKVIKALVKASVGDAQNVLYEYISEAELLNKQI
                     ENQKNLIKNQISDNFLEFENILQECSFCDEFSSGLNDAILFDIEMLGILKETAESAFL
                     TTLEKAEDIELTSSEIAKSLVYNAICEAHFEKERILKISSIILNTAFEIANESIAYAK
                     DLCLGAIKGTRDGISLAMEKFKTTLAYAKFEEDVSLKSKELIGIEDDFIALLKREIKE
                     QKNPSKDIVENLLEHELDNLFAKFKRLAVESREQLLLVLNDIKKNPKINDFNRLTQRK
                     LHRFKQEILELEKVAGEKYKELNSKKAKKLGVRLWERAKKLIKK"
     gene            complement(6990..7748)
                     /gene="xth"
                     /locus_tag="R8X70_001311"
     CDS             complement(6990..7748)
                     /gene="xth"
                     /locus_tag="R8X70_001311"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEF2929084.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWIIKENIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYSNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLSFKMKFYAKFLVYLEKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDY
                     FFISTGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
     gene            7864..9411
                     /locus_tag="R8X70_001312"
     CDS             7864..9411
                     /locus_tag="R8X70_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine--lipid A transferase"
                     /protein_id="HEF2929085.1"
                     /translation="MFKFKLSWFGFVLFNSILITLLNFNLHSFVYEKLSQNLLLTLVF
                     IVAYFGLVHMIFSLIFVKYLTKILSIFFILSSCTSLYFITFYGVLIDSDMIQNVMQTD
                     IKEVKDLLSWRLVLLAIVVLLFCVFILRIRIENNTEQGFFKKIRVRVLSALLGCSIFL
                     IAFVPLSKTFIPFFRTYNEIRMYNVPFYPIYAVYRYYVRFLKPKSEFKTIGDDAFREN
                     NSSKKLLVLVVGETARAANYSLGGYAKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPC
                     MFSLSKRQNYSSSEYQENVMDILQKTGVKASWIDNNSGGCKGVCDRLSDKQQLSSDWD
                     ENLLPFLKERLGNLDTQNIIVLHLQGSHGPAYYKRYPSEFKKFIPTCDTNELSKCDSE
                     ALINTYDNTLLYTDYLLSEIIKLLKEKKDYESSLIYLSDHGESLGENGIYLHGMPYAI
                     APSYQTHIPVIFWSNDKKLMMTAQNHKGLKLSQDNLFSTLLGYFDVKTMVYESDYDLL
                     NQTLKAN"
     gene            9411..9767
                     /locus_tag="R8X70_001313"
     CDS             9411..9767
                     /locus_tag="R8X70_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEF2929086.1"
                     /translation="MKPKYHLLNNARYALEGILALLKNEMAFRLELCVIIPAIVFSFF
                     LDVSFLEHLFLITVLILILITEALNSAIEACVDLITNEWHEKAKVAKDCASAAVFFSV
                     CLALFIWGFILGKLWL"
     gene            9758..10000
                     /locus_tag="R8X70_001314"
     CDS             9758..10000
                     /locus_tag="R8X70_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HEF2929087.1"
                     /translation="MAVKIENLMREILGKKRFELLQFLCENADENGFVMIKISELEAR
                     LNQSKPTIIATFKFLEEKKLFKKLKNGFYQLCIPCD"
     gene            10102..11106
                     /gene="pyrC"
                     /locus_tag="R8X70_001315"
     CDS             10102..11106
                     /gene="pyrC"
                     /locus_tag="R8X70_001315"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEF2929088.1"
                     /translation="MTLKNPLDMHLHLRDKNMLSLVAPFSAKDFRAGVIMPNLVPPLC
                     DLESLKSYKTRIINACENENFTPLMTLFFKNYDEKFLESAKDEIFGIKLYPAGITTNS
                     KGGVSSFDIENLKPTLEAMSDLQIPLLVHGETNDFVMDRESNFAKIYENLAKNFPRLK
                     IVMEHITTQTLCELLKDYENLYATITLHHLIITLDDVIGGKMQPHLFCKPIAKHYKDK
                     EALCELAFGGYEKVMFGSDSAPHPKHEKECCGCAAGVFSASVALCVLADLFSKNSNEA
                     NLQRFISDNACKMHNLTFEKEKIIVLENQEWQVPNEYKNENEKVVPFMAGESLKFRVK
                     "
     gene            complement(11147..11521)
                     /locus_tag="R8X70_001316"
     CDS             complement(11147..11521)
                     /locus_tag="R8X70_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEF2929089.1"
                     /translation="MDINTVLMMISDKIPSNSLPLVQDKLKNASEDKINSLAILPFKS
                     HIIGLILGLFLGAFGIDRFYKGDIGLGIAKLITWLVGVVTIWIYIGGLILFVLWIWCI
                     VDWFLVWKGIKKDNLNKILAVL"
     gene            complement(11674..12384)
                     /locus_tag="R8X70_001317"
     CDS             complement(11674..12384)
                     /locus_tag="R8X70_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEF2929090.1"
                     /translation="MNLWDKKAKSYARYNQKLNSIQEQSFKELEKLNINFKDKKIIDI
                     GCGTGVWTLHLAQNAKEITALDNAKAMLEILKEDANKLQLTNIKYENCTFTEWINKNQ
                     NAQFDIAFLSMSPALQDKKDYLNFMRLAKIRIYLGWADYRKSDFLDPIFKHFNTEFKG
                     IYKQDLESYLLENNVKFHKFIFDETRIVKRKKDEAIENALWHLNMNGVKASKQDLETF
                     VKGDIKETIQSKIKLLVF"
BASE COUNT         4416 a         1763 c         1923 g         4397 t
ORIGIN      
        1 aatatcttat ttaaattggc ttgtttttga cgacgatcta agaaattttc tatggagcta
       61 gaacgcatat tattagcatt atctagcttt tctaaatctt tattttggct ttgatattct
      121 tctttaagag agttaaattc gctatgattt tcatcaatat aaatttggaa gatagagctt
      181 gaatttgcaa attctcttaa atccatatct ttttgataat tgacatattg ttgaaaaaaa
      241 actgaaagct tatcttgaga agcggttttt ttatctactc cattcacata aagatataaa
      301 tcaaagctca ttttttgttc gttttgttgt ttgatatagt cttttatatc catttcccct
      361 ctaaggattt tttgaaaatt agtatgagca ttgagatcca aactcgcagg tttcataaaa
      421 aaattaagct cgttatcatt ttgtgttttg atatcatgat aaataaaatt catcaaaagc
      481 cctgattttg aaacttcagc atttttggtt aggtaaggtt ttaaaatttc attagatgag
      541 gtattgttta aagctctatc gaagtgaaaa ttagtaattt tgttatctag cattaaagta
      601 tttaggctta gagttttgtt tagcgcggag tttaattctt cttgattgtt gtaaattctt
      661 gaaattttgc ctaaaaattc cccattttca gtagaaaatc cggtggcaaa ttttgaaatc
      721 atatcgcgac ttaaattagc attatcattt tcgctaaatt ctaaattgac agactttagc
      781 gagctataat agctgtttaa aagatagggt aggtctattt tgttataatt taaagttgca
      841 tcttgtcttg ttaattcttt ggctatattt ctaacacttt tgatgttgat attataagat
      901 tcaggtatat tagcgatttt atttaaatct ttttcaaaaa aacctttctc gtctatccta
      961 aagctaaatt cacttgcata agaagtggtg ttaaaaatat aatttaaatt ttctaaattg
     1021 ttttcatttt cttctaaatt tgaacctttt ttatctttga ttaaattcaa agcttggcta
     1081 ttttgtaaag gattggatag ggccaaattt tgataagggt ttgccgaatt tatagtcatt
     1141 ttaaatcttt caaaaatatt gctagttttt tataagcaaa aggtgtgcca agttttttaa
     1201 atacaaaatt cagtcaaaaa ttagcaaaaa tttgctagca tttagctttt ctttttgaaa
     1261 aaatttaaaa atttatccga aaggaaagcg tatgccaaag atgaaaagcg taaaaagcgc
     1321 agttaaacgc tttaaagtag gtaaaaataa aatcaaaaga ggctctgctt ttagaagcca
     1381 tattttgact aaaaaacctg caaaaagaat gcgtgatctt cgcacagcta aatatgtgca
     1441 cagcactaat gtaaaagctg tagaaaaaat gctaggaatt taagtttttg acataagtca
     1501 ttcaaactct ccttaagttg ctaaaaattt aagggcaagc tccaaaatgg acgccacttt
     1561 atgaaaggaa ataaaaatgg caagagtaaa aacaggtgtt gtaagacgcc gcagacataa
     1621 aaaagttcta aaattagcac gcggttttta tagcggacgc cgcaaacatt ttagaaaagc
     1681 aaaagaacaa ttagaaagaa gtcttgttta tgcgtatcgt gatagacgcc gcaagaaaag
     1741 agattttcgc cgtctttgga ttgtgcgtat caatgctgct tgcagattaa acgatttaag
     1801 ttattctaaa tttatcaatg gacttaaaaa agcaggcatt gagcttgata gaaaaattct
     1861 agctgattta gcaatgaatg atgctgctgc ttttgcaaaa atcgcagaag ctgcaaaaaa
     1921 agcgctttaa tttaatgagt taagatttaa atcttaactc atgattgtca atataaactg
     1981 catttaaatt ttaaaataca actcattaaa aactaatttt atttaggatt tattaataaa
     2041 atcataaaaa ttatatgata ataaaattaa aatatcactt ataagccata gagttttgta
     2101 acacaataag gccattttag aaactttctt gcatatatat taaaaatcat cgtataagta
     2161 aattaaaatt tagttataat aatagattaa taaaaattat agcccaagga aaatatatgg
     2221 caactgatat gaatgaaatt ttacttcgaa gtgttgaagt tttacctcct ttgcctgata
     2281 ctataaataa actaagaaaa tatatcaacg aatcgggttc taatgtaaaa attgatgaaa
     2341 ttgctaatat tatttcaagt gatcctttaa tgactgctaa gcttttacgc ttggctaatt
     2401 ctccctttta tggtttttca agagaaatca cctctttggc tcaagttgtc tctcttttgg
     2461 gtataggtaa tatcgttaat actatcatgg cagattcaat tagagatagt tttaaaatcg
     2521 atgtatcacc ttatggatta agcacgacag aatttgtaaa taaatgcagc gaggaaactt
     2581 cttttatcat ggattggttg ggcaatgagg ataaaaagct atcgcattta ctagtgcctt
     2641 gttctatgct tttaagactt ggtattgtag ttttttctaa ttttcttatt caaaataaaa
     2701 aagatgccga gttcttagct agattggaaa aaaataattt tagtgattta tctatggtag
     2761 agaatgaatt tttaggtgtt gatcatattt cattcttagg atttttgctt tatcgttgga
     2821 aatttgatga tatgctagtt gaaactattt gttttgctcg ctctccgcac gcagctagaa
     2881 atgaggttaa aaaatcagct tacgctcttt cagttgttga tcatcttttt acacctcata
     2941 ataatttttc ttcttttaat atcaaggctt ctatcgcttt gattaatgag gctcgaagtc
     3001 aagggattga ttttaatctt gataatttta tttcaaaact tccaaaagaa gctaaagaaa
     3061 acctaataaa agaaggttaa attgtttatt ttattaaatt aatgaaaagt atcattttac
     3121 ctcctaatga atttttagat cattatgttt taaacgcgga atttcatcgt ttagctggaa
     3181 tttcaaaaaa tgcttataaa ttttggaaaa aagtagaaat tggtagatat caagggactc
     3241 gtattatttt tttacacaag aattccattt tagaaaaaca tcgagaagtt ttaaaacaat
     3301 gtagcgattt aagtggtttt gtgctagcaa gtgctttttg ttcttttacg ggattagctc
     3361 catcgcatct tgtaaaaaaa aataattctt caatctataa acttttagat ttaaaagaaa
     3421 ttcatggtat taaatttgta aatttaaaaa aattttatga ttttttaggg ctaaattatt
     3481 atcagcatat ttacatagaa aaatgccatt tttttagccc cacgcctttt gaaaagcgta
     3541 taaaaatcac tgagagtatg tgcgttgggt attattaaga tatctaaaaa taaaagctga
     3601 taataaagcc aataaaacga ttaaaaacat ataataaccc aaagaaaaac gccacgcatt
     3661 atctaaattt gcaaatgcaa atttatgcaa taaaagtgta agttgagggg ttatacctcc
     3721 tgcaatggca taggcgatat tataagaaaa agaaagtcct gaaaatttaa tctttgcttc
     3781 aaaagcttca ttcattatta aaggacaaaa attcatcact ccaccaaaaa gacaagctag
     3841 caagtaaaaa atactgacta gagttatatc ggcatttgta ttgtaaagaa agtgaaaata
     3901 aaacgcacaa gctaagccaa aaaacaagga aaaaataata ctagatttaa aaatacctat
     3961 tttatcagct aaaattccac ttataataca acccaaagaa ataaagaaaa ttccacccat
     4021 ttgtaaataa gtttggaaat tggtatcaaa ttgtaaaatt tctgccatat attttgggat
     4081 aaataaaatc attacaataa tacaacctgt taaaacccaa gtgattagca tagagataag
     4141 aacacctgct tttgctcttt taaatacttc tttaagtgga aatttttcta aaacattttc
     4201 ttttctcatt tgctcaaaaa caggagtttc acttaaaaat tttctaagat atattgaaat
     4261 aagtccaaaa attccaccta aaaagaaagg aactctccaa gcccattcgt ataattcttc
     4321 ttgagtgtaa attttgtgca tcaataaaaa tactatactt ccaagtaaaa ttccacccac
     4381 cacagaagct gttaaaaagc ctatataagt tcttctttgt ccttgcggtg aatgctcata
     4441 tacaaaaatc caagcaccgg gtaattctcc tcctatggaa ataccttgag ctattcttat
     4501 aagcattaaa aatactacac aaagataacc aatactttca taagaaggga taaaggccag
     4561 tgcaaaagtt ggtattacca taagcaaaat acttagcata aacatttttt tgcgcccaaa
     4621 tttatcgcca aaatgtgcca tcactatacc gcctagcggt cttactacat aagctgctgc
     4681 aaatatgcca taggtattaa aaagttgcca aaaagggctt aaattttcag ggaagaagtt
     4741 ttttgaaata taacttgaaa agaatgcaaa gataataaaa tcataaaatt ccaaggttcc
     4801 acctaaagat gaaagtccta gtgtttttat atctttttta ctaagaattt ttctcatttt
     4861 taatccattt cataaaaatc atcatcattt gcttcatcat caaagtcata atcatcatca
     4921 tcataattat aggatttgtg atgattgtga gcatactcat cctcttcacc ttcataatca
     4981 tcaaattcta aatcttcatc atcataagcc attatttact ccttgataaa caaaataaaa
     5041 tctaatttta gcttaaattt gattgctttt gctataattt tttatatttt ttaaaaaagg
     5101 ttgattatgg aattgactca tttagatgaa aacaaccgcc ctaaaatggt agatgtaagc
     5161 caaaaagata taagtaaaag agtggctaca gcaagcggta tgatcagtat gagcgaagaa
     5221 gcttttaagg ctataaaaaa caatactgct aaaaaaggcc ccgtacttca aactgctgtt
     5281 atagcagcta tcatgggtgc taaaaaaaca agtgaaatta tccctatgtg tcatcctttg
     5341 atgatttcta aggttgagac agatatagtt gaatttccta aagattatac ttttaaactt
     5401 atagtaacgg taaaatgcga gggtaaaaca ggggtagaaa tggaagcttt aagcggcgtt
     5461 agcataggac ttttaactat ctatgatatg attaaagcca tcgataaaac aatgaaaata
     5521 agtgaaattg tacttgaaag caaagaaggg ggtaaaagtg gtaaatttgt gcgatcttaa
     5581 acaagagcct attgttaatt atcctacttt ttgggattat aaggtgattt ttgaagcgca
     5641 tgttcatgca ggagctttgt ttgaagagct tttgggacaa agagatttta aatacaaaca
     5701 ttctaatgca agttctagtg gaaaatatca aagtttttta ctcagtgttt atgtagatag
     5761 caaaaaggat cgtttggata tttttgaaaa attaaaagct aaagccaaat ttgtgcttta
     5821 agaaagaggg attaaatgaa aaatactttg attatatttg agaattcttt atccaatctc
     5881 aaaaaagatg aagtgaaaga cttgcttgag gatttaagtt ttaatcttgc gtataagcaa
     5941 atttcacaag atccacacag cactaaaaag attttaaatt cacttttggt tgagttttta
     6001 accattttga aaaaacttga tttatttgat gatgaaaatg ttgcaaaagt tatcaaagct
     6061 ttggtaaaag ctagtgtagg agatgctcaa aatgtccttt atgaatacat cagcgaggca
     6121 gaattattaa acaaacaaat cgaaaatcaa aagaatttaa ttaaaaatca aatcagtgat
     6181 aatttccttg aatttgaaaa tatcttacaa gaatgttctt tttgcgatga atttagcagc
     6241 ggattaaatg atgcgatttt atttgatata gaaatgcttg gaattttaaa agaaactgct
     6301 gaaagtgctt ttttaactac tcttgaaaaa gctgaagata tagaacttac tagcagtgaa
     6361 attgccaaaa gtcttgttta taatgctatt tgcgaggcac attttgaaaa agagcgtatt
     6421 ttaaaaattt caagtattat tttaaataca gcttttgaga tagcaaatga atctatagct
     6481 tatgctaaag atctttgtct tggtgcgatt aaagggacta gagatggaat ttctttagct
     6541 atggaaaaat ttaaaaccac acttgcttac gcaaaattcg aagaagatgt gagtttaaaa
     6601 agtaaagagt taataggcat agaagatgat tttatcgcac ttttaaaaag ggaaattaaa
     6661 gaacaaaaaa atccatcaaa ggatatagtt gaaaatttat tagagcatga gcttgataat
     6721 ctttttgcta aattcaaacg ccttgctgtt gagagtaggg agcaattgct tttggtttta
     6781 aatgatatca agaaaaaccc aaaaatcaat gattttaata gactaactca aagaaaattg
     6841 catcgcttta agcaagaaat tcttgagctt gagaaagtag caggggaaaa atacaaagaa
     6901 ttaaattcaa aaaaagctaa aaagttaggc gtaagacttt gggaaagggc aaaaaaactc
     6961 attaaaaaat aatatcccat tttgggatat taaatatcta tttctatgcc tacaggtgcg
     7021 tgatctgaac caaaaatatc atctcttatg aaagcatttt tcagcttgtc ttttaaacct
     7081 gttgaaatga aaaaataatc gattctccag cccacatttc tttctcttgc cttcattcta
     7141 taactccacc acgagtattt ttctttgata tcgccattga tctctctaaa agtatcaata
     7201 aaaccaagtt ttagcaaatc atcaatccaa gctctttcta tcggtaaaaa tcccgaggta
     7261 ttggcatttg cctttggatg ggtaagatcg atttctttgt gtgcggtatt gacatcacca
     7321 caaatgataa tttcaaagcc atcctttaaa agtttttcta aatacaccaa aaatttcgca
     7381 taaaatttca tcttaaagct taaacgctct tcatcttttt gtccatttgg aaaatagata
     7441 ttaaaaagtg ctatgttttt aaaacgatgt tctaaaactc tgccttcttc atcatcaaaa
     7501 aattcacatt ttttaacttc actatcaaaa ttgcaaaggc tcataacacc cgagtatcca
     7561 gcccttttgg cagaattaga atacatatgc ttaaaagggt attcataaat ttttttagga
     7621 aatttatctt catgtgcttt aatttcttga aaacctataa aatcaatatt ttcttttatt
     7681 atccaatcaa gcgcattttt atcacaaata gctcttaagc cattgacatt ccatgaaagt
     7741 agtttcatca gttaatcctt aaatttttga aataaaaata atatcataat taataaaaaa
     7801 tattactaat ggttagtttt ttctttctaa actttacttt ttagttattt ttaaggggag
     7861 aatatgttta aatttaaact ttcttggttt ggatttgtac tttttaattc catactcatt
     7921 acacttttaa attttaattt acattcattt gtttatgaaa aattatccca aaatttactg
     7981 cttactttag tttttatcgt agcttatttt ggtttggttc atatgatttt ttcacttatt
     8041 tttgtaaaat atttaactaa aatattgtct atatttttta ttttatcatc ctgtaccagt
     8101 ctttatttta tcacttttta tggagtttta attgattcag atatgataca aaatgttatg
     8161 caaactgaca taaaagaagt gaaagatttg ctaagttggc gtttggtttt attggctatt
     8221 gtcgtcttgc ttttttgtgt ttttatttta agaattcgta ttgaaaataa tacagagcaa
     8281 ggtttcttta aaaagatacg ggttagagtt ttaagtgctt tgttgggttg ttctatcttt
     8341 ttaatcgcct ttgtgccttt aagtaaaacc tttatacctt tttttagaac ttacaatgaa
     8401 ataagaatgt ataatgttcc tttttatcca atttatgccg tatatcgtta ttatgtgcgt
     8461 tttttaaaac caaagtccga atttaaaacc ataggtgatg atgcttttag ggaaaataat
     8521 agcagtaaaa aacttttagt tttagtcgta ggtgaaaccg ctagagcggc aaattactct
     8581 ttgggtggat atgctaaaaa tgataccaat ttttatacca aaaaagataa tgtagtattt
     8641 tttgataatt tttcttcatg cggcactgct acagcggtga gtctgccttg tatgttttct
     8701 ctttcaaagc gtcaaaacta ttcaagtagt gaatatcaag aaaatgttat ggatatcttg
     8761 caaaaaacag gcgtaaaagc ttcttggata gacaataact caggcggatg caagggagtt
     8821 tgcgatagat tatctgacaa gcagcaactt tctagcgatt gggatgagaa tttattgcca
     8881 tttttaaaag aaagactagg aaatttagat actcaaaata tcatagttct tcatttacaa
     8941 ggctctcatg gaccagctta ttataagcgt tatccaagcg aatttaaaaa atttatccca
     9001 acttgtgata ctaatgaact ttcaaaatgt gatagtgaag ctttaatcaa tacttatgat
     9061 aatactttgc tttatacgga ttatctttta agtgagatta tcaaactttt aaaagaaaaa
     9121 aaagattatg agagttcttt aatatacctt tcagatcatg gagaaagttt gggtgaaaat
     9181 ggaatttatt tacacggaat gccttatgct atagcgccaa gctatcaaac tcatatccct
     9241 gtcatttttt ggagcaatga taaaaaactc atgatgacag ctcaaaatca taaaggctta
     9301 aaactttctc aagataatct tttcagcaca cttttgggtt attttgatgt taaaaccatg
     9361 gtttatgagt cagattatga tttattaaat caaaccttaa aggccaatta atgaaaccaa
     9421 aatatcatct tttaaacaat gcacgatatg ctctagaagg aattctagcc ctgcttaaaa
     9481 atgaaatggc ttttcggcta gagctttgtg tgattatccc cgctatcgtt tttagctttt
     9541 ttttagatgt aagctttttg gagcatttgt ttttaatcac tgttttaatt ctcatcttaa
     9601 tcactgaagc tttaaattca gctattgaag cttgtgtgga tttgattaca aatgaatggc
     9661 atgaaaaagc taaagttgct aaagattgtg caagtgcggc agtatttttt agtgtgtgtt
     9721 tagcactttt tatttgggga tttatcttag gaaaattatg gctgtaaaaa ttgaaaattt
     9781 aatgagagaa attttaggta aaaaacgctt tgagctgctt caatttttat gtgaaaatgc
     9841 ggatgaaaat ggttttgtga tgataaaaat aagcgagctt gaagcaagat taaaccaaag
     9901 caaacctacc atcatcgcca cttttaaatt tttagaagaa aaaaagcttt ttaaaaagtt
     9961 gaaaaatgga ttttatcaac tttgcatccc ttgtgattag aaaataaatt tttattttaa
    10021 gtattcttta tcttagaacc actttttatt attattttta gctttatagg ataaaatttg
    10081 ctgattgatt taggagaaaa aatgacactt aaaaacccac tagatatgca tttgcattta
    10141 agagataaaa acatgctaag cttggttgca ccttttagtg ctaaagattt tcgtgcgggt
    10201 gtgattatgc caaatttagt tccaccgctt tgtgatttag agagtttaaa atcttataaa
    10261 acgcgtataa taaatgcttg tgaaaatgag aatttcactc ctttaatgac tctttttttt
    10321 aaaaattatg atgaaaaatt tcttgaaagt gctaaggatg aaatttttgg tatcaagctt
    10381 tatcctgcgg gcatcaccac aaattcaaaa ggtggggttt caagttttga tatagagaat
    10441 ttaaaaccca ctttagaagc gatgagtgat ttacaaattc cacttttggt acatggagaa
    10501 accaatgatt ttgtgatgga tagggaaagc aattttgcta aaatctatga aaatttagct
    10561 aaaaattttc cgcgtcttaa gattgttatg gagcatatta cgactcaaac cttatgtgaa
    10621 cttttgaaag attatgaaaa tttatatgca accattactt tacatcattt aatcatcact
    10681 ttagatgatg ttatcggtgg aaaaatgcag ccccatcttt tttgcaagcc tatagcaaag
    10741 cattataaag ataaagaagc gctttgtgag cttgcttttg gtggatatga aaaagtgatg
    10801 tttggaagcg atagtgcgcc acatcctaag catgaaaaag aatgttgcgg ttgtgcagcg
    10861 ggtgtattta gtgcgagtgt agcactttgt gttttggctg atctttttag taaaaattca
    10921 aatgaagcta atttacaaag atttatttcg gataacgctt gcaagatgca taatttaacc
    10981 tttgaaaaag aaaaaatcat tgttttagaa aatcaagaat ggcaagttcc aaacgaatat
    11041 aaaaacgaga atgaaaaagt agttcctttt atggcggggg aaagtttaaa atttagagta
    11101 aaataaaaac tagttttaaa actagttttt atctaagttg ctatttttat aatacagcta
    11161 agattttatt aagattgtct tttttgatgc ctttccatac taaaaaccaa tccacaatgc
    11221 accatatcca taaaacgaat aaaattaaac caccgatata aatccaaatg gtaacaacac
    11281 ctactaacca agttataagt ttagcaatac ccaaacctat atcaccctta taaaaacgat
    11341 caattccaaa ggcacctaaa aacagaccta agatcaaacc tataatatga cttttaaaag
    11401 gtaagatagc aagagagttg attttatctt cacttgcatt tttaagctta tcttgcacaa
    11461 ggggcaagct attggatgga attttgtctg aaatcatcat caatacagta tttatatcca
    11521 taaaatctcc tataataata ttagaacaaa ataataacta aaataatcta aaattacttt
    11581 taagtttaat tttataaaat gagcattttg ataaaaatat ttcagtatta caagattata
    11641 tatctacctt aagatagaat tttatctcaa ggattaaaaa accaaaagtt tgatttttga
    11701 ttgtatggtt tctttgatat cgcctttcac aaaagtttct aaatcttgct tagaagcttt
    11761 aactccattc atatttaaat gccacaaggc attttctatg gcttcatctt tttttctttt
    11821 tactatgcgt gtttcatcaa agataaattt atgaaatttc acattatttt ctaacaaata
    11881 actttccaaa tcttgtttat aaataccctt aaattctgta ttaaaatgtt taaatatagg
    11941 atctaaaaaa tcactctttc tataatcggc ccagccaaga taaattcgaa ttttagccaa
    12001 tcgcataaag tttaaatagt cttttttatc ttgcaaagca ggggacatac ttaaaaatgc
    12061 tatgtcaaat tgagcgtttt gatttttatt tatccattct gtaaaagtgc aattttcgta
    12121 tttgatattt gttagttgga gcttgttagc atcttctttt aaaatttcta acatagcttt
    12181 tgcattatca agagcagtga tttcttttgc attttgtgct aagtgtaaag tccatactcc
    12241 tgtgccacat cctatatcta taatcttttt atctttaaag tttatattta gtttttctaa
    12301 ttctttaaaa ctttgctctt gtatggaatt gagtttttga ttgtatcttg cgtagctctt
    12361 agctttttta tcccaaagat tcattgatag tccttatttt taaatcaata aaatcatagc
    12421 ataaaaaata ctaaattatt aaattatcta tttgtaaatt ctactaacac ctagttcaaa
    12481 ctaggtgtta gtgaacaat
//
LOCUS       DAQUWA010000051        11640 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.051, whole genome shotgun sequence.
ACCESSION   DAQUWA010000051 DAQUWA010000000
VERSION     DAQUWA010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11640
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.051"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            1..1188
                     /locus_tag="R8X70_001318"
     CDS             1..1188
                     /locus_tag="R8X70_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929091.1"
                     /translation="MFLILCLCFGFVFAKEQKLVDVKPAENFYPKISTQECDSNCLLE
                     LLEARLYLSFLSEFVDQHDQFLSNIYAKLLNSITDFDKNLQKITSVKLAIIIPEKTIK
                     SYSNTIINSSIAYLLSQRAEIKVKVFLTGTEDNDKIRSTLEQVQAQGYQYAIAALTLK
                     GVNQLKDYSGDMKIFIPTLHKNNVSFSNLNKNIIFGSIDYDAQVLALLNKANSDIAAF
                     SDGSMLSSNLNSRVLEQNANTRFYRVEGEKLDFYRLLRSQGSLNNASIFLNTPLIKTA
                     LISSQLRVYNIQPFVLLSTQINYNSTFLSLTQEGDRKNFILANSIDNHDDNLSYLNEI
                     FNQSIDYNWIAYATSIGTDYFYTQFLNTKSDSLFDEKIQNSQILYKVRLMKGSKASFE
                     ELK"
     gene            complement(1180..1554)
                     /locus_tag="R8X70_001319"
     CDS             complement(1180..1554)
                     /locus_tag="R8X70_001319"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HEF2929092.1"
                     /translation="MKIRIYYEDTDAGGVVYHSNYLKFCERARSEIFFAKNAPIFDAN
                     KGHFLLTKANCFFIKSAKLGDIIEVKTKLLKIKNASVDIAQEIYRDEILLFKVELTLA
                     YIQNEKPVKIDAGIKKLFEELF"
     gene            complement(1830..3116)
                     /locus_tag="R8X70_001320"
     CDS             complement(1830..3116)
                     /locus_tag="R8X70_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929093.1"
                     /translation="MSETYEIYTPDGLTLDVEKDTNKILFKENIKPTGNYTEEYSKAV
                     FKSYYIMKNSPYKDYQPKYLDPNFYTGKASTLLEFTEWQSIYLKDPIKGSIAPWTKAE
                     KAYYKSLKTKRERYKYLIIRSGIRSTVIDIPYDAYANVDEKGYLINEEYAYIYDEVNN
                     NKETLKSSLFRQEWGIAAGILGKPEYFVRSKNHGFNARMIQCFILYIQLTGGGYEELG
                     IKRGIYNYADNLLEIGIGMAGIHKNPLRAKLVKELAKTIQPDEFGMLPFIDEIMGADW
                     VIDLNKYDFAYDKEGRIIWALYNDIEKGKLKDPRDVDSTPESRNEFDDAMDGYRNGMK
                     TNFDVDIRNERDERSAKLTMDTLILSAKLAALTPPQGYPNAPYYFTPERLEWIYKRGY
                     LDKLLDPRIPAIYRYNFPKELRAKILKFDEKNGIKD"
     gene            complement(3158..3658)
                     /locus_tag="R8X70_001321"
     CDS             complement(3158..3658)
                     /locus_tag="R8X70_001321"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929094.1"
                     /translation="MTILTSFDNEAEMDETIFADYLFDFSNLYKLANHYADDYVAIVG
                     QLFLDDYIDFWRCAYHKMDNENTKTPNLSQYKKENKYETWKYFRDNYIYSYNDNLVNH
                     VTKGDFWGNLDNWDVYNINCFRTQKGTKYFNEILAPKFYNKYKDLEVEIDDKGNIIRW
                     IGKINR"
     gene            complement(3851..4535)
                     /locus_tag="R8X70_001322"
                     /pseudo
     CDS             complement(3851..4535)
                     /locus_tag="R8X70_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005022107.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4545..5282)
                     /locus_tag="R8X70_001323"
     CDS             complement(4545..5282)
                     /locus_tag="R8X70_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929095.1"
                     /translation="MKYNYIKWNKEEKCAIFFPDIDYSLWKKTQLKENAYNNPSLIIS
                     SCLITKMDILELFEYYILFICGKSMGASRWECNDLILLGTCNIDNLSNPFSLNTPKPT
                     YISEYINILGQLFLAGYIDFGSYCDEEDRNKIDYPSNLSYYKEDKYQAWIYFRDNFFY
                     QDKFIRDLDDPETLDEGGYSLILNDVSWDTPQYWSQYNIWVATTPKGTKYFNEILAPK
                     FYNKYKDLEVEIDDKGNILRWIGEINR"
     gene            complement(5272..6068)
                     /locus_tag="R8X70_001324"
                     /pseudo
     CDS             complement(5272..6068)
                     /locus_tag="R8X70_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811677.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6084..7013)
                     /locus_tag="R8X70_001325"
                     /pseudo
     CDS             complement(6084..7013)
                     /locus_tag="R8X70_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838773.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7367..8883)
                     /locus_tag="R8X70_001326"
                     /pseudo
     CDS             complement(7367..8883)
                     /locus_tag="R8X70_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935935.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
     gene            complement(9137..9529)
                     /locus_tag="R8X70_001327"
     CDS             complement(9137..9529)
                     /locus_tag="R8X70_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929096.1"
                     /translation="MNNKEQIKKLRDNAELAWASYGYFDFINKQYSFDEKDKDKFKTL
                     YAKINDLKKSDEKVQNAKATYTDILNMEYNSLFDGEFSPLQAKQFFERYDLLIHQPNT
                     ESSFSAALFYDTHKDGFVVWFRGIECGF"
     gene            complement(10062..10827)
                     /locus_tag="R8X70_001328"
                     /pseudo
     CDS             complement(10062..10827)
                     /locus_tag="R8X70_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910001.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
     gene            complement(11034..11195)
                     /locus_tag="R8X70_001329"
     CDS             complement(11034..11195)
                     /locus_tag="R8X70_001329"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929097.1"
                     /translation="MSKNIKTQEAKLDLITKFLDYANIADASYAMLQYVFKGIIKYKN
                     DNGNELEKK"
     gene            complement(11199..11369)
                     /locus_tag="R8X70_001330"
     CDS             complement(11199..11369)
                     /locus_tag="R8X70_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929098.1"
                     /translation="MVFIIQRIYPIIYDNYGIFLKGDEGAGLYFRYMEVLSCKNIDKK
                     FKKDDWQVETLE"
BASE COUNT         3812 a         1886 c         1393 g         4549 t
ORIGIN      
        1 atatttttaa tcttatgttt atgctttggc tttgtttttg ccaaggagca aaaattagtc
       61 gatgttaaac ctgctgaaaa tttttatcca aaaataagca cacaagaatg tgactcaaac
      121 tgcctactag aacttttaga agcaaggctt tatcttagtt ttttgagcga atttgttgat
      181 caacatgatc aatttttatc aaatatttat gccaaacttt taaattctat tacggatttt
      241 gacaaaaatt tacaaaaaat cacttctgta aagcttgcca tcatcatacc tgaaaaaact
      301 ataaaaagtt attctaatac cataatcaac tcaagcattg cctatctttt aagccaaagg
      361 gccgaaatta aagttaaagt ttttttaacc ggcacagaag acaatgataa aattcgttca
      421 acactcgagc aagttcaagc tcaaggctat caatacgcta ttgctgcact aacacttaaa
      481 ggcgtgaatc aattaaaaga ttattcagga gatatgaaaa ttttcatccc tactcttcat
      541 aaaaataatg tttctttttc aaatttaaac aaaaatataa tctttggaag catagattat
      601 gatgctcaag tgttagcact tttaaacaag gcaaattccg atatagcagc ctttagcgat
      661 ggatctatgc tttcgagtaa tttaaattct cgcgtacttg aacaaaatgc aaatacaaga
      721 ttttatcgtg ttgagggaga aaaacttgat ttttatagac tcttacgctc gcaaggcagt
      781 ttaaataatg cttcaatatt tctcaacact cctttaatca aaacagcact tataagctct
      841 caattacgcg tatataacat ccaacctttt gtgctcttat caactcaaat caattataat
      901 tctacatttt taagtcttac tcaagaaggg gaccgtaaaa attttattct tgcaaattct
      961 attgataatc acgatgataa tctatcatat ctaaacgaaa tttttaatca aagcatagat
     1021 tacaactgga tagcatatgc tacgagcata ggaacagatt atttttacac tcaattttta
     1081 aataccaaaa gcgatagcct ttttgatgaa aaaattcaaa attctcaaat tttatataaa
     1141 gttcgcctca tgaaaggatc taaagctagt tttgaagaat taaaataatt cttcaaaaag
     1201 ctttttaatt cccgcatcta tcttaacagg cttctcattt tgaatatacg caagggtaag
     1261 ttcaacctta aaaagcaaaa tctcatctct ataaatctct tgcgcaatat caactgaagc
     1321 attttttatt tttaaaagct ttgttttaac ctctataata tcaccaagtt tagctgactt
     1381 tataaaaaaa caatttgctt ttgttaataa aaaatgtccc ttattagcat caaaaatcgg
     1441 tgcattttta gcaaaaaaaa tttcacttct tgctctttca caaaatttta aataattact
     1501 atgatacact actcctccag catctgtatc ttcataatat atgcgtattt tcattttaga
     1561 atccttttgt caaaaattca atcaaaaact aatgtatcaa aaaatatgtt aaatttttct
     1621 aattttaaac atatctaaat gaaattttat ccatatttaa aaagtaatca agctttacat
     1681 tattataaaa attaaaatta aaatgcagtt ttacttttta agatatcttg aagctgccat
     1741 acaaaacaat attaaagaag ataagattct ttttgagaat cttaccctaa aagcattgga
     1801 aaagtatatt aaagattttg agtgattttt taatctttaa tgccattttt ttcatcaaat
     1861 tttagtatct tagctctaag ctcctttggg aaattatatc tataaatagc agggattctt
     1921 ggatcaagga gtttgtctaa atatcctctt ttataaatcc attccaatct ttcaggcgta
     1981 aaataataag gggcattagg atagccttga ggaggagtga gggctgcgag tttggcactt
     2041 aatattaggg tatccatagt cagtttagca gatctttcat ctctttcgtt tctaatatct
     2101 acatcaaaat tagttttcat cccatttcta tatccatcca tagcatcatc aaattcattt
     2161 ctactttcag gagtagaatc cacatctctt ggatctttta atttaccttt ttcaatatca
     2221 ttatataaag cccaaatgat tctgccttct ttatcatagg caaaatcata tttatttaaa
     2281 tcaatcaccc aatctgctcc cataatctca tctataaaag gtagcatacc aaattcatca
     2341 ggctgtatag ttttagctaa ttcttttacc aatttagccc ttaaaggatt tttatgtatc
     2401 cctgccatac ctatacctat ttctaaaaga ttatcagcat aattataaat tcctcttttt
     2461 atacctaatt cttcatatcc tccacctgtg agttgaatat ataaaataaa acattgtatc
     2521 attctggcat taaagccatg atttttagaa cgcacaaaat attcaggttt tcctagtatt
     2581 cctgctgcta taccccattc ttgtctaaaa agagaagatt ttaaggtttc tttattattg
     2641 ttaacttcat cataaatata ggcgtattct tcattgatta aatatccttt ttcatctaca
     2701 ttagcataag catcataggg tatatctata actgtacttc ttataccact tcttataatt
     2761 agatatttat atctttctct tttagttttt aaagatttat aataagcttt ttctgcttta
     2821 gtccaaggag ctatgcttcc tttgatagga tcttttaaat atatgctttg ccattctgta
     2881 aattcaagta aagtagaagc tttacctgta taaaagttag gatctagata cttgggttga
     2941 tagtctttgt agggggagtt tttcataata taataagatt taaaaaccgc tttggaatat
     3001 tcttcggtat aattgcctgt gggtttaata ttttctttaa ataatatttt attggtatct
     3061 ttttccacat ctaatgttaa tccatcgggt gtataaatct cataagtttc gctcattatt
     3121 tatccttcgt aaaatccaat gtaaaatcca aataaactca tctattaatt tttcctatcc
     3181 atcttataat attaccctta tcatcaatct ctacttctaa atctttgtat ttgttgtaaa
     3241 atttaggagc taagatttca ttaaaatatt ttgtaccttt ttgagtgcga aagcaattga
     3301 tattatacac atcccaatta tccaaattcc cccaaaaatc gccttttgtt acatgattta
     3361 ctaaattatc attataagaa taaatataat tatctctaaa atatttccaa gtttcatatt
     3421 tattttcttt tttgtattgt gataaattag gagtttttgt attttcattg tccattttat
     3481 ggtatgcgca acgccaaaaa tcaatataat catctaaaaa aagttgtcct acaatggcta
     3541 cataatcatc cgcataatga tttgctaatt tatataaatt tgaaaaatca aataaataat
     3601 cagcaaaaat tgtttcatcc atttctgctt cgttatcaaa acttgtcaaa attgtcattt
     3661 caaacaattc taaaatatct gttttttaag gtttggaatt tgtagaaaaa ggtgcatttc
     3721 atagtattta cttatttttt tacctaactc gtaaaaataa aaattcatat gctctttatt
     3781 taatacttta tatttcatct taaatctctc aaattgtgaa tttttgtttt tgattctaaa
     3841 atttttagat tcatctatta atctctccaa tccacctaag cacactacct ttatcatcaa
     3901 tttctacttc taaatctttg tatttgttat aaattctagg ttctaaaatt tcacggagat
     3961 atttcgtgcc tttctctgtt cttgctaccc aaaatctata tctatcccaa tattgtggcg
     4021 tattccaaga agaataaaca taatcatcat cactcatatc tttatagagt tctttaactt
     4081 ccattatatc cctacaataa gcttctgtat aaaagaaatt atctctaaaa taaatccaag
     4141 cttggtattt atcacctttg attggaaagt aaattttcct ccttattttg caaaccacac
     4201 ataccaaatt ctatataacc tgctaggaaa agttgtccta taatgcttac atactcgcta
     4261 ttgtaattcg gttttatgga gttttttaag ttttcatctt ctgtaaaaaa caaaggaaaa
     4321 catgtatcat taaattcgca cccatcttgc agagttgatc ctaaaaaatg atcttcaaaa
     4381 tattctaaaa tatcggtttt tttaatattt ggaatttgta gaaaaaagag catttcccaa
     4441 tcaccacgat aaatctcata ttttatttta taaaatatct catcaaaatc aggaaaaaat
     4501 gagccgtatt tatgaattac tttaccaatc gccattttta tctttcatct attaatctct
     4561 ccaatccacc taagtatatt acccttatca tcaatctcta cttctaaatc tttgtatttg
     4621 ttgtaaaatt taggagctaa aatttcatta aagtattttg tgcctttggg ggttgttgct
     4681 acccagatat tgtattgtga ccaatattgt ggcgtatccc aagaaacatc atttaaaata
     4741 agactatatc caccctcgtc taatgtttca ggatcgtcca aatctctaat aaatttgtct
     4801 tgataaaaga aattatctct aaaatatatc caagcttggt atttatcttc tttataataa
     4861 gataagtttg agggatagtc tattttattt ctatcttctt catcgcaata agaaccaaag
     4921 tctatatatc ctgctaagaa tagttgtcct aagatgttta tatattcact tatataggta
     4981 ggtttgggtg tatttaaaga gaaagggttg ctaagattgt caatgttaca ggtacccaat
     5041 aaaattaaat cattacattc ccatcttgat gcgcccatgc tttttccaca aataaataaa
     5101 atataatact caaataactc taaaatatcc atttttgtta tcaggcaaga agatataatt
     5161 aaagagggat tattgtaggc attttctttt aattgtgttt tcttccataa gctataatct
     5221 atatcaggaa aaaatatagc acatttttct tctttattcc atttgatata attatacttc
     5281 atttttcacc ccattttcta tatgtattgt tctaagattt cctcttggtt tattagaatt
     5341 tacctctatg gtcccacctc cacttttaga agctttttat attgtataat agtttgatca
     5401 tctaattttc tcatttttat agtacctcca agtttatctt gatttatatc ttttaatatg
     5461 tctgccccat ctgtaatctc ttcccaaatt tcttttattt gtttattatc cttaacccag
     5521 aaaacattct tgcttctacc aagtcctaat tctttagaag tcttaagatt gtatttattt
     5581 tttaacacct ctatcacttc ttgtttagtg gcatatttgg attttttctt aataatattt
     5641 tttgcatttt taggattttt cactgcacca agcattgcta aggcatcacc gataatgctg
     5701 acattttcaa gtgaatttga aatatcttcc actatacctt ctaatggggt aaataaaggc
     5761 tttatggctc cgcttgatga tttttcccat tctttaaatt catcaaatat tatctcaata
     5821 aactctccac taccatcttg tgtttgtatt cttataacat tatcagggat gatttcttga
     5881 gtattgttat agttttcatt ggtgtgagct tgtgtggtat ttgtatcatc ttttatatta
     5941 tcacttataa gcatatcttt atcatttgcg ttaaaataat ccttagtata aacattaaag
     6001 caacacacat tttcattatc aagccactca tctaaacctt ttgcaatttc aaaaccaatc
     6061 ttttgcattt tagcaggagc taaaaaaact ctatgatgga tgatgttttc attttctcta
     6121 taatctttat catattcatg tagctgtgta aaatacccta ctcctagatc cttgttttta
     6181 aattctttat aagcactttt ataaactttg gcaatgtttt tggggataac aaagattaat
     6241 tttaacaaat gcataccaag tctaatctca cactctttaa attcataatc tttactaaag
     6301 tcttgtttaa gagtatttag tacattaata tcatttagat tgaataaatc atttttagat
     6361 aattctaatt tatctaaacc ttgttcgttt taatataggg tatcgtttag atataaatta
     6421 gtgaaaagat tgtctttttg atatttgtgc tctttataat acattcttaa tctagcttct
     6481 tttaactcta tttgattttt gctttgttct cctaagccct cctcaggatc aaagctgtga
     6541 tcaaatttaa acttagtagg ggtaaagctt acttttaaag caaagccttt atctgtttta
     6601 caagctgaga tgagttcttg taatatagcg tattctccat ttactttctt ttgagataag
     6661 gagcctttaa tatccactac cttagtacaa ggataactta cattagctat agtgtgagga
     6721 caagctacta tactagagtt taataaatca ctttctagca ttatagggat accatcactt
     6781 ttaaaggatt ttcctttgtt tgatttaagt atgactttgc ctccatggat acattctagg
     6841 ttttgatttt ctaaaagagc gtgaagtttg gctatgcttt gttttttatc tacttgtgtg
     6901 gttttttgtt cttttagagt gtttgaaatt aaatctttgt attctaagct ttgttttctt
     6961 aagcattcta atttgatatt taaagaattt tctataatag aataattaag caagcaaagt
     7021 tcatcatttt tataaaagat actaagtctt cctaaaccac tgccttcatc tttaggagaa
     7081 aaataataac tgggtatatc ttgttttata agattatctt gatctaattc tccaaagtaa
     7141 aaaggattat taggaagttc ggtggagcct gtaaggaggg tggagtttcg gaagatataa
     7201 gcttgatagc tttggagttc ttcaaaagta aaatctgtcg ttgcttctaa tttataaagt
     7261 tcttcataaa tgctttgaca atcaatgatg cttttatttt cacaaaataa atactttttt
     7321 atctttatga atagaatata aaaagtctct acctatcata attttcctaa ataataccta
     7381 ttttggcttt tccactaaaa tataaagctt gcgatatttt acaaactcta cctaaatacc
     7441 gctcatccca aatttgatct tttagcctat aaacttttga attatatcca tatatttttg
     7501 ttatattgtt aatattttca agacatttca tatctttata aactgcaatg aaaattctaa
     7561 attccccaat ggcaatttta tgggctaaat tttcttgatt attaataaag gaacaatctt
     7621 ttctgtattt attaaaatca tttttatcaa gaattaaaat atatttttct ttttcttgca
     7681 cctttaaaat aaaatctata atttctgttt aactaataat aggaacttta taacttgtat
     7741 aataactatc tccaagctct tctaaaatac cattggtttc ttgcattata gtggctatta
     7801 atgaaagaga atactcaaag tggttaatct tttctggatg gtttttattg aacccaaaag
     7861 agctattttt attagtagca ttatttttta acacaaaagt ttctgtataa atttgaatat
     7921 ttttcataaa atgattaaga tactctatac actcactaag gcttttatct ttaactttgt
     7981 tatagttagc atctaattct aaaagataag aataaaaata gagagtatta acaagaggtt
     8041 ttatggagtg atcgtttttt cctgtatata tacctaaggc attgcttgca tcatattgag
     8101 ctgaagcaat gatttcaact ccaccattat caaatacaca aacaatcttt tctggattta
     8161 aaatttgctc cacaatatta tttccaagca aattagctaa gaatctcatt agcatattat
     8221 tattccatct atggtaggag aattaaaagt acaaactttt gaagcactaa attttatttg
     8281 attaaaatcg gtacaaagtg ttctatcgat tgtatcacaa aactgcattg caacaacagc
     8341 taaatatcca cccagagaat gtcctacaaa ggtaatttta ctagaatcta tattatttag
     8401 aataggtgct atatctaata aaaattgttt taaggcatta gcttgaaaat ctcctttacc
     8461 aaaagtaagt cctatatcgg caaatgcatc catacttaca attccttctg ttcctcgaaa
     8521 actagcaata tactcatctt tttgaatgtc ataaaaaagt gtagcagaaa aaccactaaa
     8581 agtattgggt tggtgaaatt tgattatata gcgttttgca aaattttgtg tttggatttc
     8641 tctaaattca ccattgagtt ttggataaaa aactaacgaa tcatcataaa taaaataatc
     8701 tctatggtct ttagacaatg ctttataata ttcaaatttt tctatatttt ctttatcttt
     8761 taagattctt tctgttccta ttgtgaaatc attagttttt tgtccatcaa tatagataag
     8821 gttgaaatag cttgcccaag ctaactcagc atagtctcta agattcttga tttgttgctt
     8881 catgcttttt ccttttaatc aaatataaga tataataaaa ttaccaatgg acaatataac
     8941 aataatagaa gaaaccttat caaatatttt ttaattcttg ttattaaaaa taaccataga
     9001 ttgactacta ttggaggcaa aattatccat ccaatcacta tgagaaattc cttaaatcta
     9061 tctggattat gtccaattaa aggtgatatt atccaagcaa agataaaaaa tataatccag
     9121 caaatataaa gtatttttag aatccgcatt ctattcccct aaaccacacc acgaaaccat
     9181 ctttgtgtgt atcatagaac aaagcagcag aaaagcttga ctctgtattt ggttgatgga
     9241 ttaataaatc atatctttca aagaattgtt tggcttggag tggggagaat tcgccatcaa
     9301 ataaggaatt atattccata ttgagaatgt cggtgtaggt agctttggca ttttgtactt
     9361 tttcatcgct tttctttaaa tcatttattt ttgcatataa agttttaaac ttatctttat
     9421 ccttttcatc aaagctatat tgcttgttta taaagtcaaa ataaccataa ctagcccaag
     9481 ctagttctgc attgtctcta agctttttaa tctgttcttt attgttcatt ttatttcctt
     9541 tttaaaataa gcacaatttt cataattttc acgccattca agctcataag aagcaacact
     9601 ctttgttgta agatacttcc ttctattatg ccattctaca tagaaaaaaa ctttttttaa
     9661 tggtaaaatt tcattagtag ttttattttt ttctatgtcc aatcctagac taaacgataa
     9721 acgccctttg tctctatctt cattaaaact atataattct atatttctct ttggatatat
     9781 tgactatttg aaacattggc cattccttta tttccctgta aaacttcttc aaaatttgtg
     9841 ttaaaataaa ctaataattt attatagtat tccttgtcta tcttaccacc attagactga
     9901 tatattttgg gttatagctt acacatctct ttaaattcgt gataactcgg ttgtaggcta
     9961 taaggcacaa accaccccca accaaatatc atactccata taattatcaa aggaagtaga
    10021 ataaaacttg atatttttag aatcttttta agtcttatca tttatacact ctctttagat
    10081 tttatattat tataagcaag ttgtctataa tatggtgcaa tatctgctaa gatagggata
    10141 gcattaatat cgagtgtcat cattgttgta tgagtagaaa gactcattgt tatcccatag
    10201 tattgacttt gtttttcttg gattatcttg tgtaatatct ttcgtatctt actttctaag
    10261 aaaatattat ctttgcctaa atctcttgct ctatttgcta tattttctat ttcttctttt
    10321 ataaatcttt cttgttgttc tttactgtga aatacaaaga gttttactat ataatcataa
    10381 ggaggtgcta tctttctagc tccaggtgca ttataagtat ataaatttga tattgtttct
    10441 attcttatca tcacagatac ttaaagcaaa gagttgtgca agacagcctc caagagagtg
    10501 tcctgtaata gtaagagaat ctttttcttt gatttgtgga taatctttaa tacaagtttc
    10561 ataaaagttt agcatatcat catattgggc tttaggtata gagcctatgg ctaaagaagc
    10621 atcagctaca aacaaatctt taaaagaact catttctgtt cctctaatgg ctaaaatata
    10681 attgatatag ccatattcac ttgtatagct ttcttctttt gttttactat taatttgttt
    10741 tcttttttct ccaaataaag tagcagagaa gccacttgta gtgttgggct gatgttttaa
    10801 aagtttaaat ctatttacaa aatcaatagt tcttttacta agtgcatcat ttaaccctac
    10861 cctgctaata tcattatcca atgttatttc tttactatca aaacaagtat ttataagaga
    10921 aatacaatat ttaggttcta ttttaactat tttattttgt tcaaaacgag cttgtatagc
    10981 tcttgcatag gtagaatttt gattattatg tttatcacct agtctttgga tatctacttt
    11041 ttttctaatt cattgccatt atcattttta tatttaatta tacctttaaa aacatattgc
    11101 aacatcgcat aactagcatc tgctatatta gcatagtcta agaatttagt gattaagtct
    11161 aatttagctt cttgcgtttt aatattttta ctcatttgtt attccaaagt ttcaacttgc
    11221 caatcatctt tcttaaattt tttatcaata ttcttacaac ttaatacttc catatatcta
    11281 aaatataatc cagcaccttc atcacctttt aagaatatac cataattatc ataaataata
    11341 ggataaatgc gttgaataat gaataccata ataatcttca aatgtaactt ctgttaaagt
    11401 aaatttattt ttttgcaaca cattaatgct tttttgattt tttaaaatca aaatatattt
    11461 ttttatttat tttttgatta aaaaagaatt ctcctttttc atcatgtatt gtatttcctt
    11521 tttctctatt gctaaatatt tcccaataag ctttattgta aattattact ttattatcta
    11581 tatctttaca caagctccta aactcataat actgcggatc catatattta taagaacatc
//
LOCUS       DAQUWA010000052        11548 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.052, whole genome shotgun sequence.
ACCESSION   DAQUWA010000052 DAQUWA010000000
VERSION     DAQUWA010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11548
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.052"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(197..271)
                     /locus_tag="R8X70_001331"
     tRNA            complement(197..271)
                     /locus_tag="R8X70_001331"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(237..239),aa:Asn,seq:gtt)
     gene            complement(353..1603)
                     /locus_tag="R8X70_001332"
     CDS             complement(353..1603)
                     /locus_tag="R8X70_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEF2929099.1"
                     /translation="MNRSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKY
                     SLIANARLLNFAGIISEREFEEQTKNYNKMEPILEVRQIRRILFGGEVLARVEVNNGL
                     IEIISYDRQVYLNIIFDGKVNLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKL
                     KPLKALKKQIDKFAQGKLNDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRN
                     MMHELKTPITKGLITLEMLEDNKYKERLESIFNRLEILINEFAAIEQITSGAAFINRK
                     KYNILDVLDEAKEIAMRDDNNIRIFMDESFFVNVDFKLFTTAIKNMIDNGIKHSENGF
                     IQIDIMDDYICFKNRGPELNNTLEYYTQAFTQGGSKQKSSFGLGLYIVNTILESHGMK
                     LDYDYEEGINLFYFRNLKSIIVKE"
     gene            complement(1600..2274)
                     /locus_tag="R8X70_001333"
     CDS             complement(1600..2274)
                     /locus_tag="R8X70_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEF2929100.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIISSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            complement(2357..3775)
                     /locus_tag="R8X70_001334"
     CDS             complement(2357..3775)
                     /locus_tag="R8X70_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEF2929101.1"
                     /translation="MKKLILSLSLASALFAANINFNETSITSNRVNPAAGDVVLSYHN
                     SIRDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFPQRRGGNDKEVVSS
                     LGSGVIISQDGYIVTNNHVVDDADTISVSLPGSDTEYKAKLIGKDPKTDLAVIKIEAN
                     NLWAITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGFLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGRID
                     RGFLGVTISALQGDTKKAYKNQDGALITDIQKGSSADEAGLKRGDLVTKVNDKVIKSP
                     SDLKNYIGTLEIGQKISLDFERDGENKRVDFILKGEKENPKTVQNDLIEGMTLRNLDP
                     RFKERLQIPKDVNGVFVESVKDKSRAKDSGFKEGDIIIGVGQSEIKNLKDLEQALRQV
                     KKKEFTKIWVYRNGFATLLILK"
     gene            3981..4880
                     /locus_tag="R8X70_001335"
     CDS             3981..4880
                     /locus_tag="R8X70_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HEF2929102.1"
                     /translation="MNSLYETLGVSKNASADEIKKAYRRLARQYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSKNTGGVNLDDILKDLFGGGFGG
                     GSSRGSRFNGFSSKGFNTGFGGFGGFEEEDLDSTIELSIPFEKAVVGGEYSFNLQGET
                     IKFKIPHGIKQGEKLRIRNKGKNGRNGTRGDLIVKVKLGESEIYQREDDDLYQKVDIS
                     LKTALFGGKVTVNTLKENKKEATITIPANSKNGQKIRLKGYGVQNRKSDIYGDMYLVL
                     NVVLPNTETLDEKLIEMLKEKLS"
     gene            4897..5271
                     /gene="hspR"
                     /locus_tag="R8X70_001336"
     CDS             4897..5271
                     /gene="hspR"
                     /locus_tag="R8X70_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HEF2929103.1"
                     /translation="MEHHYNEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDRIKLILRLTRDMGVNLAGVDVILKLKNQLHEFENLIDELRLELSKQQNP
                     NASSKAVVKHKNSFDLIFYEKK"
     gene            5272..6894
                     /locus_tag="R8X70_001337"
     CDS             5272..6894
                     /locus_tag="R8X70_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEF2929104.1"
                     /translation="MDNFLEIFLITAALAIVLNVIFKKFEIPTIIGYIAAGEIISKIY
                     HLSGKGEITHIAEFGIVFLMFTIGLEFSFKHLIAMKQEVFLNGSLQMLTCGFVFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIGQLLLTTLLSAVILIALLFFIGKYLVDRIFRLIIRASSQEIFIS
                     TILFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIAADLIPFRDLLLGLFFIT
                     VGMQIQLHIVAQNWFIICVLTLLIMGLKFGIVCGFLFLYTKKRVALKTAFSIAQVGEF
                     ALAIFSLLQAKSMLDVETAQILIVVSIVTMIITPFVLNNIRKIANVVEDMTLNTNVVQ
                     QSTHSTLKNHLVIFGYGRLGQEIVQKIKNTGVPYLVLESDLNLVELGISRGENVVFAN
                     AAQEETLKIANITECAVAIVTITNEAKLEMICQVLASYPKPIDTIIHVNGSLEKILFS
                     SIDENIRIVRSEKVIARNLVQEALECRIHKNT"
     gene            6904..7236
                     /locus_tag="R8X70_001338"
     CDS             6904..7236
                     /locus_tag="R8X70_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929105.1"
                     /translation="MAKIDEKTLRVKYLRALEKFANAAISALKKENFDKEKFQERMEK
                     NKKIVEKCEAVNLNSSYNKSLENFVNHCLDFSKQKEELLSLANALDKLKKGEKKEKHK
                     TYLKDYYD"
     gene            7229..7849
                     /locus_tag="R8X70_001339"
     CDS             7229..7849
                     /locus_tag="R8X70_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEF2929106.1"
                     /translation="MINVFFDMDGTLIDSANAISCAVNEIRNELNLSPLSREKIMQTI
                     NTPNVDWAKELYSIDNFHHSSFKDGFEKYFIKHYEQSVVLFEGVKEILEFLKEQNCFL
                     AIATNAPQSSLSSILKKHEIIPYFDKILGVSLGIEPKPHPMMLDLLKSEAPHKISVFI
                     GDSQKDRECAKNANVPYFHAKWYQKDLQENEFSNANELKNFLEKYL"
     gene            7902..9896
                     /locus_tag="R8X70_001340"
     CDS             7902..9896
                     /locus_tag="R8X70_001340"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEF2929107.1"
                     /translation="MSELLIEIGTEELPAIPLLKELANIEKKWKDVLEDYRLVSDFKF
                     YYTPRRLVIFHENFASKQEDSFAEFIGAPKNVAYKDGQLSAAGQSFLQKAGISENELS
                     FKEIKGKEVLYHQKAIKGLQSQEVLGEMIHQFLKSLNFGKSMRWGANSFEFIRAIRSI
                     VCILDDNLVEFESYGVKSAKKTFIHRSVSYDLQEFNNAKEYFSLLEKNYIILDPLQRK
                     ERILKQFKLLESQNNIQIGEDEELLAEVIAIVEYPNALLGSFEEEYLQIPSEVIITSM
                     RENQRYFAVFNEKGLSNHFIVVSNAVCEDYSKIIHGNERVLRARLSDAMFFYQNDLQS
                     GLNPEKLAKMTYLEGLGTMQDKSLREIKIAEVLCQMLNNDKIANISTAIKYAKADLAT
                     QMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEFSSIVALANK
                     LDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQALLEKLASHYKNFD
                     MQILKDFIFERLYTFYSVNASFIKAVLSSKNTDLIHINQSVKALIELSKKANFQENFT
                     TFKRLANIANKTSHKVDESLFVEEAENKLYKAFKEKIQAHSLQEKLENLFSLKPFIDE
                     FFDKVMINAKDEKLKNNRQALIYEIYEEFLKIADLKELSL"
     gene            9893..10714
                     /locus_tag="R8X70_001341"
     CDS             9893..10714
                     /locus_tag="R8X70_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEF2929108.1"
                     /translation="MKAFFLFLSLALWLFGAQNFELIKGQALFLELDKKDFISLKNED
                     KILATLPHPKNQEKILAIFSLPYKNPPQNTKLTALYKNKKEEIFIKTLEGNYKSEKLS
                     VENKKVFPPKAVKERIAKEFKEANAIYSSYTPKALFDGSFNTPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRAAVGTPIYAANSGVVKIAKDRYFAGKSVVIDHGFGIYSQYYHLS
                     KIEVKVGQKVKKGDFLGLSGATGRVSGPHLHFGILAGGKQVDPLDFISKFNTLFQ"
     gene            10711..>11548
                     /locus_tag="R8X70_001342"
     CDS             10711..>11548
                     /locus_tag="R8X70_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEF2929109.1"
                     /translation="MKFSEFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAK
                     HFLDLIDKKVLKLPLELVEIGANEGYLSRDFLAALLEFRPEIFSKLSFFIIEPHEKLR
                     NLQKKTLEGVEFTHKRSLKECHFENAFFFCNELFDSFTCELIDDDKMAFIKDFKLVFE
                     PMEAKLKEKCEILNLKKGELSLELEEFFKDLDKASKKFIFASFDYGVFNPQQFSIRIY
                     QKHEVFNPFEITLKDFFSKSDLTYNVNFNQIQQLIKEHDFKLLALKKQNQALIDFGFE
                     ELL"
BASE COUNT         4081 a         1821 c         1831 g         3815 t
ORIGIN      
        1 aacataaaat aaataaattt catatttcaa atactaagaa tttatatcaa aatttgctat
       61 ttaaaagata aaaaataaat taaaaaactg atatgattat aacattgggt tttggtatga
      121 taaaatatac ttaattccat aacttaatat ttggatttat taaaaaataa aatatgattt
      181 tatagagagt tagaagtggc tccggatgta ggattcgaac ctacgaccaa tcggttaaca
      241 gccgactact ctaccgctga gctaatccgg aatatcttaa aaagtaaaat gtaattatat
      301 ttgattttta aaactttgtc aagcattttt ttaaaaaaat gcaaaaaata ttttattctt
      361 taacgataat actctttaaa tttctaaaat aaaataaatt tataccctct tcataatcat
      421 aatcaagctt cattccatga gattctaaaa tagtattgac tatgtaaagt ccaagtccaa
      481 agcttgattt ttgcttcgag cctccttggg taaaagcttg agtataatac tctaaagtgt
      541 tatttaattc aggacctcta tttttaaaac aaatataatc atccattata tcgatttgta
      601 taaagccatt ttcagaatgc ttaataccat tatcaatcat atttttaatc gcagtggtaa
      661 aaagcttgaa atctacattt acaaaaaagc tttcatccat aaaaatgcgt atgttattat
      721 catctcgcat agcaatttct ttggcttcat ccaaaacatc taaaatattg tattttttgc
      781 ggttgataaa tgctgctcct gaagtaatct gctctatggc cgcaaattca ttgataagaa
      841 tttcaagacg gttaaatata ctttctaatc tttctttgta tttattatcc tctagcattt
      901 caagagttat aagccctttg gtaatcgggg ttttaagctc gtgcatcata tttcttaaga
      961 aaaattggcg tgattgattg agcttacgaa tttgaacgat cgcttgataa aaagcctcac
     1021 ttacttgaga aatttcatcc acccccgtgc ttacatcttc tatatcatta agctttcctt
     1081 gtgcaaattt atcaatttgc ttctttaaag cttttaaagg cttcagtttt ttaaatatat
     1141 aaatatagag caacacaagt atacaaatca cggctacagc tatggcttta atgataaaat
     1201 atctataggt ttgatagtct tgatctttgt aaagatttac cttgccatca aaaatgatat
     1261 ttaaatacac ttgtctatca taagagatga tttcgatcaa gccattattg acctcgactc
     1321 tagctaacac ttccccgcca aaaagaattc tacgaatttg tctaacctct aagataggct
     1381 ccattttatt gtaatttttc gtttgttctt caaattctct ttcactaatt atccctgcaa
     1441 aatttaaaag ccttgcgttg gctattaaag aatatttggt atttaattct ctagtataat
     1501 tttgctgatc gtattctata agccacaaaa acccaagaat aacactgaca ccagcaaaaa
     1561 taaaaataaa agttatggta taaaaaatag atgaacgatt cattgagtca gcttatagcc
     1621 tatacctctg atagaatgga tatattttgg agtttttgga tcatcaccca ttttttgacg
     1681 aatacggctg atgattacat cgatgctttt attgcttgag tcttcactga ttgaagaaca
     1741 attataaaca agctcttcgc gactgacaac accgccttct tttttgatca aatagcttaa
     1801 aatgtcaaat tccgcattgg ttaaagtcag ctcttgtcct ttcattgtga tgatatgctt
     1861 gtattgatca taaacaagat ctttaacgct ttttgctatg gcgctttttg tatttgaaat
     1921 gcgtcttaaa tggcttttaa tgcgcgcttg aagttcttta ggattataag gctttggcaa
     1981 ataatcatcc gcgcccaatt ctaaagcatt aaccttatct gtaatatcat gtctagcgct
     2041 tgagataata ataggcgtat catacttttt acgaatttcc tcacacactt caagtccatc
     2101 aagtcctggc aaggaaagat ccaaaattat aagctgatat tcttttaaag caagttttga
     2161 aagacctata taaggctcgt gtgcgatatc aactttcata tcaaattttt ctaaatactc
     2221 agccgtaatt tcagcaagct ctaaatcatc ttctatcata aggatatttg tcattgcatt
     2281 ccttttactg tatttaatct tagtttttaa attctaaact aaattatata acgaaaggga
     2341 aaccctttca taaaaattat ttaagtatta acaaagttgc aaaaccatta cgataaaccc
     2401 aaattttagt aaattctttt ttcttcactt gtcttaaggc ttgttctaaa tcttttaaat
     2461 ttttaatttc actttgtcct acgcctataa tgatatcacc ctctttaaat cctgaatcct
     2521 tagccctgct cttatcttta acactttcta caaaaacccc atttacatct tttggaattt
     2581 gcaaacgctc tttaaatctt ggatctaaat ttcttaaagt cataccctcg atcaaatcat
     2641 tttgaacggt tttaggattt tctttttctc ctttaaggat aaaatcaacc cttttatttt
     2701 ccccatctct ttcaaaatcg agtgaaattt tttgacctat ctctaaagtg cctatatagt
     2761 ttttaagatc gcttggactt ttaatcactt tatcatttac cttagttacc aagtccccac
     2821 gcttaagtcc tgcttcatca gcacttgaac ccttttgtat atcggtaatt aaagcaccat
     2881 cttgattttt ataagctttt ttagtatcac cctgtaaagc agaaatagtt acacccaaaa
     2941 atcctctatc aatcctaccc ttttcaataa gctttttagc tatatctttc accatattcg
     3001 aaggtattgc aaagccgatg ccattatttc cacccccacg agaaagaatg gctgaattta
     3061 ttcctactaa aaatccgcga ctatcgacta aagcgccgcc tgaatttcca ggattgattg
     3121 aagcatctgt ttggatgaaa ttttcatatt ggtttaagcc tatattgtct ttatttaaag
     3181 cagaaattat cccgcttgta acactaaatc caacaccaaa aggatttcct aaggcaaaaa
     3241 caacatctcc ttccattaaa tcatctgaat ttgtaaaagt aatagcccaa agattgtttg
     3301 cttctatttt aatcactgct aaatccgtct ttggatcctt gcctataagc ttggctttat
     3361 attctgtatc actgcctggc aaacttacac tgatagtatc tgcatcatct actacatggt
     3421 tgtttgtaac gatataacca tcttgcgaaa taatcacacc cgagcccaaa gagcttacca
     3481 cttctttatc atttcctcct cttctttgtg gaaaatcaaa atcaaaaaat tgtttaaaat
     3541 aagggtcgtt aaaaaaatca tctaaaggac ttggacgatt ggctcttgta atggtttttg
     3601 aagtagagat atttacaaca gattttttag catctcttat cgaattatga taagaaagaa
     3661 ctacatctcc agccgcagga ttgacacgat tgcttgttat acttgtttca ttaaaattga
     3721 tatttgcagc aaataaagca cttgctaaac tcaatgataa aataagcttt ttcattttgt
     3781 ttcctttttt atttatatta ttcttaaaac atataatttg taaaatattt tacgcatttc
     3841 ataagtataa aaccgaaaat ttacaaaatt gtaaatgaaa gcttgagtga taaaaattta
     3901 taaaacttga ttgacttagg ctaaagtttt tgatataatt tctattaaat aaaacaatta
     3961 tatatttttt aaggaataac atgaatagct tatatgaaac acttggagta tctaaaaatg
     4021 ctagcgcaga tgaaataaaa aaagcctatc gtcgtttagc aagacaatat catcctgata
     4081 tcaataaaga aaaaggcgct gaagaaaaat ttaaagaaat caatgccgct tatgaaattt
     4141 taagtgatga aaaaaaacgc gcacaatacg atcaatacgg agactccatg tttggaggac
     4201 aaagttttca cgatttctca aaaaatacag gtggggtcaa tttagatgat atcttaaaag
     4261 atctctttgg tggaggcttt ggtggaggct cttctagagg aagtcgtttt aatggctttt
     4321 catcaaaagg ctttaacacc ggctttggag gttttggcgg atttgaagaa gaggatttgg
     4381 attctactat agaacttagc attccttttg aaaaagcagt ggtaggtgga gaatatagct
     4441 ttaatcttca aggagaaacg atcaaattta agattccaca tgggatcaaa caaggagaaa
     4501 aacttagaat tcgtaacaag ggtaaaaatg gccgcaatgg aacacgcggg gatttgattg
     4561 ttaaagttaa attaggagaa agtgaaatat atcaaagaga agatgatgat ttatatcaaa
     4621 aagttgatat ctctttaaaa actgccctat ttggtggaaa agtcaccgtt aatactctta
     4681 aggaaaacaa aaaagaagcc accataacca tacctgcaaa ttctaaaaac ggacaaaaaa
     4741 ttcgccttaa aggctatggg gtgcaaaatc gcaaaagtga catctatgga gatatgtatt
     4801 tggtattaaa tgttgtttta ccaaacactg aaaccttaga tgagaaatta atcgaaatgc
     4861 taaaagaaaa actatcataa aaaaaggagt aaagtcatgg agcaccatta taatgaaccc
     4921 gtatatttaa taagtgtcgt agcaaaagta ttaagcatac atccacaaac cctaagacaa
     4981 tatgaaagag aaggtttgat agaacctagt agaactgatg gaaaaataag gctctattct
     5041 caaagggata tcgatcgtat caagcttatc ttgcgtttaa cgcgcgatat gggggtaaat
     5101 ttggcaggag tagatgtgat tttaaagctt aaaaatcaac ttcatgaatt tgaaaattta
     5161 atcgatgagc tacgcttaga gcttagcaaa caacaaaatc caaatgcaag ctcaaaagca
     5221 gttgtaaaac ataaaaatag ttttgattta attttttatg aaaaaaaata gatggataat
     5281 tttttagaaa tttttttaat tacagctgct ctagctatcg ttcttaatgt tattttcaag
     5341 aaatttgaaa ttcctactat tatcggttac attgctgcag gagagattat ttctaaaatt
     5401 tatcatctaa gtggcaaggg tgagattaca catattgctg aatttggtat agtattttta
     5461 atgtttacta tagggcttga attttctttt aagcatttaa tagccatgaa acaagaggta
     5521 tttttaaatg gctctttaca aatgcttact tgcggctttg tttttatgtt gctagctata
     5581 ggaattttag gacttggtga taaaagcgca accatagtag gttttgctct agctctttct
     5641 tcaaccgcag tggtgcttaa aattttaaat gataatggcg atattaatga gcaatacgga
     5701 agaaaagcct tagggatttt actttttcaa gacatagctg tgattccttt gttattgctt
     5761 gtggatattt tctcttcaaa taatcaaaac ataggacaat tactccttac aactcttctt
     5821 tcagcagtta tcttaatcgc tttacttttc tttataggta aatacttagt cgataggata
     5881 tttagactga ttatacgcgc ttcctcgcaa gaaattttta tcagtactat actctttatg
     5941 gtgattgggg caagcttttt ggcaaattat tttggttttt cttattcttt aggagctttt
     6001 atcgcaggag ccttgatagc agaaactaaa tataaacata aaatcgcagc agacttaatc
     6061 ccttttagag atttactctt aggcttattt tttataaccg taggaatgca aattcagctt
     6121 catatcgtag cacaaaattg gtttattatc tgtgtcttaa ccttacttat aatgggttta
     6181 aaatttggca tagtatgtgg ttttttattt ttatatacca aaaaaagagt ggctttaaaa
     6241 actgcttttt ctatcgctca agttggagaa tttgctttgg caatcttctc gctcttgcaa
     6301 gcaaaaagta tgctagatgt tgaaactgct caaattttga ttgttgtttc tattgtaact
     6361 atgattatca ccccttttgt attaaacaat ataagaaaaa tagccaatgt agtagaagat
     6421 atgactttaa acactaatgt tgttcagcaa agcactcaca gcaccctaaa aaatcatctt
     6481 gtaatctttg gatacggacg cttaggacaa gagatagtgc aaaaaatcaa aaatactggt
     6541 gttccttatt tggttttaga aagtgattta aatttggtag aacttggcat aagtcggggt
     6601 gaaaatgtcg tttttgccaa tgctgcccaa gaagaaacac tcaagatagc caatataaca
     6661 gaatgcgcag tagcaatcgt aaccataacc aacgaagcca aactcgaaat gatttgtcag
     6721 gttttagctt cttatccaaa gcctattgat acaattatcc atgttaatgg tagtcttgaa
     6781 aagatacttt tttcaagtat cgatgaaaac atacgcattg taagatctga aaaagtcatc
     6841 gcaagaaatt tagtccaaga ggctctagaa tgcagaattc acaaaaatac ttaaaggatg
     6901 gtattggcaa aaatagatga aaaaactcta agggttaaat atttaagagc cttggaaaaa
     6961 tttgcaaatg cagctatttc ggctttaaaa aaagaaaatt ttgataaaga gaaatttcaa
     7021 gaaagaatgg aaaaaaataa aaaaatagtt gaaaaatgcg aggcggtaaa tttaaattca
     7081 agctataata aaagcttaga aaattttgta aatcattgcc ttgatttttc aaaacaaaaa
     7141 gaagaacttc taagccttgc aaatgcttta gataaactta aaaaaggtga aaagaaagaa
     7201 aaacataaaa cttatttgaa ggattattat gattaatgta ttttttgata tggatggcac
     7261 cttaatcgac agtgcaaatg ctatatcttg tgctgtcaat gagataagaa atgaactaaa
     7321 tttaagccca ctttctaggg agaaaatcat gcaaaccatc aatactccaa atgtagactg
     7381 ggcaaaagag ctttatagta tagataattt ccatcattct agctttaaag atggttttga
     7441 aaaatatttc atcaaacact atgagcaaag cgtggtttta tttgaagggg ttaaagaaat
     7501 attggaattt ttaaaagagc aaaattgttt tttagctatc gccactaatg cgcctcaaag
     7561 ctcgctttct agcatactta aaaaacatga aatcattcct tattttgata aaattttagg
     7621 tgtaagtctt ggtatagaac ccaaacccca tcctatgatg ctagatcttt taaagtctga
     7681 agcgccccac aaaataagtg tttttatagg tgatagtcaa aaagatagag aatgtgcgaa
     7741 aaatgctaat gtgccttatt ttcatgcgaa atggtatcaa aaggatttac aagaaaatga
     7801 atttagcaat gcaaacgaac ttaaaaactt tttagagaag tatttataag ttttttaatg
     7861 aaaattgagt taaaataaaa taaattttta aaagagtaca tatgagtgaa ttattaatag
     7921 aaatcggaac agaagaacta cccgctattc ctttactaaa agaattagcc aatatagaaa
     7981 aaaaatggaa agatgtttta gaagattatc gcttggtgag tgattttaaa ttttactaca
     8041 ctccgcgtcg cttggtgatt tttcatgaaa atttcgcaag caaacaagaa gatagctttg
     8101 ctgaatttat aggtgcacct aaaaatgtcg cttataagga tggtcaatta tcagccgcag
     8161 gacaaagctt tttacaaaaa gcaggcatta gcgaaaatga gctttctttt aaagagatca
     8221 aaggtaaaga agtcttgtat catcaaaaag ccattaaagg tttgcaaagc caagaagttt
     8281 taggagagat gattcatcaa tttttaaaaa gtcttaactt tggtaaaagc atgcgttggg
     8341 gtgcgaattc ttttgaattt atccgtgcaa tccgctctat agtttgcatc ctagatgata
     8401 atttagtcga atttgaaagc tatggtgtta agagtgctaa aaaaactttt atacacagaa
     8461 gtgtaagcta tgacttgcaa gaatttaata acgcaaaaga atattttagc cttttagaaa
     8521 aaaattacat tatcttagat ccactccaaa gaaaagagag aatactcaag caatttaaac
     8581 tcctagaaag ccaaaacaat atccaaatag gcgaagatga ggagcttttg gctgaagtta
     8641 ttgctatcgt agaataccct aatgcacttt taggaagttt tgaagaagaa tatcttcaaa
     8701 ttcctagcga agttatcatt acttccatga gagaaaatca acgctatttt gcagtcttta
     8761 atgaaaaagg tttaagcaat cattttatcg ttgtaagcaa tgcagtgtgc gaggattact
     8821 caaaaatcat tcacggtaac gaaagagttt tgcgcgcaag acttagtgat gcaatgtttt
     8881 tctatcaaaa cgatttgcaa agtggcttaa atcctgaaaa actcgctaaa atgacttatc
     8941 ttgaaggctt aggaacaatg caagataaaa gtctaagaga gataaaaatc gctgaagttt
     9001 tatgtcaaat gctaaacaat gataaaatcg caaatataag cactgcgatc aaatacgcaa
     9061 aagctgactt agcaacgcaa atggtttatg aatttacaga tttgcaaggc attatgggaa
     9121 gctattatgc acaaaaaatg ggtctagatt atgaaatttg tcttgctata aaggagcaat
     9181 acctaccaaa ttccgaacaa gctccacttc ctagcactga attttcaagc atagttgccc
     9241 ttgcaaacaa gcttgatacc ctcataggac tttttagcat aggtaaaatt ccaagcggta
     9301 caaaagatcc ttacgcctta aggcgtgctg ctaatgggat aatcaaaatt gccctaaatt
     9361 taaacaaaga atttgacatt caagcactac tagaaaaact agcaagccat tataaaaact
     9421 ttgatatgca aattttaaaa gattttattt ttgaaagact ttataccttt tatagcgtta
     9481 atgcttcttt tatcaaagcg gttttaagct ctaaaaacac agatcttatc cacatcaatc
     9541 aaagcgtaaa agcccttata gaattaagca aaaaagctaa ttttcaagaa aatttcacta
     9601 cctttaaaag actggccaat atcgctaata aaacttcgca caaagtcgat gaaagccttt
     9661 ttgttgaaga agcagaaaat aaactttata aagcctttaa ggaaaaaatt caagcacact
     9721 ctttacaaga aaaacttgaa aatctcttct cacttaaacc ttttatagac gaattttttg
     9781 ataaagtaat gatcaatgcc aaagatgaaa aacttaaaaa taatcgccaa gcacttatct
     9841 atgaaattta cgaagaattt ctaaaaattg ccgatcttaa agagctaagc ctatgaaagc
     9901 tttttttctt tttttaagtc ttgctctttg gctctttgga gctcaaaatt tcgagcttat
     9961 caaaggacaa gctttatttt tggaactgga taaaaaagat tttatttctt tgaaaaacga
    10021 agataaaatt ttagctaccc ttcctcatcc taaaaatcaa gagaaaattt tagctatatt
    10081 ttcactgcct tataaaaatc ctcctcaaaa tactaagctt accgctcttt ataaaaacaa
    10141 aaaagaagaa atttttataa aaactttgga aggcaattac aaaagtgaaa aattaagcgt
    10201 agagaataaa aaagtttttc cacctaaagc tgttaaagaa cgcattgcta aagaatttaa
    10261 agaagctaat gcaatttata gttcttatac tccaaaagct ttatttgatg gctcttttaa
    10321 tacgccttta aattctttta ttacgagtga ttttggcaaa gcaagaacct ttaatgaaaa
    10381 agttgcaagc tatcatagcg gaacagactt tagagccgct gtaggaaccc ccatctatgc
    10441 ggctaattca ggtgtagtaa aaatagcaaa agatcgctat tttgcaggaa aatcagtagt
    10501 cattgatcat ggttttggca tttactcgca gtattatcat ctttctaaaa tcgaagttaa
    10561 ggtaggacaa aaggttaaaa aaggtgattt tttggggcta agtggagcta caggaagggt
    10621 tagtggacca cacttacatt ttggtatttt agctggaggt aaacaagtag atcctttgga
    10681 ttttatctct aaatttaata cactttttca atgaaattta gcgaattttt tcacgcttgg
    10741 ctgcatgaaa gttattataa aaacgctgtt agtataggca aaaatggaga tttttttacc
    10801 gcagtaagcg tgggaaatct ttttggtact cttttagcaa agcatttttt agatcttata
    10861 gataaaaaag tcttaaaact tcccttagaa cttgtagaaa taggagccaa tgagggctat
    10921 ttgagtagag attttttagc cgctttgctt gaatttaggc ctgaaatttt ttccaagctt
    10981 tcttttttta tcatagagcc tcatgaaaaa ttaagaaatt tgcaaaaaaa gaccttagaa
    11041 ggcgtggaat ttacacataa gagaagctta aaagaatgtc attttgaaaa tgcctttttc
    11101 ttttgcaatg agctttttga tagttttact tgtgaattga tagatgatga taaaatggcc
    11161 tttattaaag attttaaact tgtttttgag cctatggagg ctaaattaaa agaaaaatgc
    11221 gaaattttaa atttaaaaaa aggcgaatta agcctagaat tggaagaatt ttttaaagat
    11281 ttggataaag cttctaaaaa atttatcttt gcaagttttg attatggcgt gtttaatccc
    11341 caacaattta gcattagaat ttatcaaaaa catgaagttt ttaatccttt tgaaatcact
    11401 ttaaaagatt tttttagtaa aagcgattta acctacaatg tcaattttaa tcaaattcaa
    11461 cagcttataa aagaacatga ttttaaactc ttagctctaa aaaaacaaaa ccaagccttg
    11521 attgattttg gttttgaaga attattaa
//
LOCUS       DAQUWA010000053        11326 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.053, whole genome shotgun sequence.
ACCESSION   DAQUWA010000053 DAQUWA010000000
VERSION     DAQUWA010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11326
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.053"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            12..197
                     /locus_tag="R8X70_001343"
     CDS             12..197
                     /locus_tag="R8X70_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929110.1"
                     /translation="MDKKIKYYISNKTKYSYPILTKDVQCSNCKNFYSIEFASNLKKI
                     EKECPSCKTKMDIKLKD"
     gene            complement(194..1225)
                     /locus_tag="R8X70_001344"
     CDS             complement(194..1225)
                     /locus_tag="R8X70_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HEF2929111.1"
                     /translation="MKKNIVFFEVRGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKNEIYNYVKENFDGYVSRINPGNLKEENEYFDMLRKLCQEGLVGMPHPDAMIGY
                     GAKDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGEVKGDILPLDTKIKCTEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAQYRYDKPEDWKNLVDMFLGEL
                     PKVREKLGNYDLPLIWTADFILDNDEKGNDKYVLGEINCSCVGFTSHLELADEVAQNI
                     INIVSKAKN"
     gene            complement(1333..2229)
                     /gene="sppA"
                     /locus_tag="R8X70_001345"
     CDS             complement(1333..2229)
                     /gene="sppA"
                     /locus_tag="R8X70_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEF2929112.1"
                     /translation="MQILKSFFKGLGSVIKFINTYFKTFVLLLIVIWLLVPSSNSSSS
                     YANLERIDLKGEILDSSELLEKIISAKNNDNIKGVLFVIDSPGGAFAPSMELALAIKD
                     LKTKKPVIAYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSELAKKIGI
                     KEQTIQAGEFKSAGTFTRAWSEEEREFLQNLIDESYDLFSEFVAKERDLELDKRKDWA
                     NARVFLAQNAKDLGLIDELSNYENAKKELQELAKVLNPVWKEEGRIDRFLNRLESQSS
                     NFLGKVISDTVLRLNANFLELK"
     gene            complement(2217..3446)
                     /locus_tag="R8X70_001346"
     CDS             complement(2217..3446)
                     /locus_tag="R8X70_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEF2929113.1"
                     /translation="MYIISAKYIFLCDEQFSILENKAFVFENEILELGELEELKKRYP
                     EAKLIKTSPNCVILPAFINPHTHLEFSANSTTLYFGEFLIWLKSVINSRSMLNEQAKE
                     ELILKNIQKMQKSGIGTIGEISSFGSDLNPCVRASQNGMRVVFFNEILGINEAQIQDK
                     KQEFLTRFEKSLKFKDEFFIPAISVHSAYSTHPELAKFAINLAKKQKLLISTHFLESK
                     AENAWLKEAKGGFKEWFKNFTPDPKPLYKASEFIQLFKGVRTLFTHCVYLKEMDLLDK
                     NLHSITHCAFSNRLLSQKTFDLKKALKSGLNIHLGTDGLSSNISLSILDEMRASLLVH
                     TDFDLLKLAPKLLQMATLYPAKALNLNLGEIKQGKMADFSVFELGECNKEQAPLQFIL
                     NAKEVQKLFIKGKECKF"
     gene            3539..4027
                     /gene="aroQ"
                     /locus_tag="R8X70_001347"
     CDS             3539..4027
                     /gene="aroQ"
                     /locus_tag="R8X70_001347"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEF2929114.1"
                     /translation="MKVMVIQGPNINMLGVREVRIYGAMKMEDIHTQMKMAASQNNVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAISAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGSIVGFGPFGYHLALMGIIQICEQVKNLHATQAQQMQAGA
                     QN"
     gene            4030..4512
                     /gene="folK"
                     /locus_tag="R8X70_001348"
     CDS             4030..4512
                     /gene="folK"
                     /locus_tag="R8X70_001348"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEF2929115.1"
                     /translation="MLKIKGARRLETSRFFPYFSQNKKEFKYLALVGLGSNIEPEKKR
                     FNKLFRVMMEDRRFKILATSPFLINEAFGFKAQKDFTNAAMLIQTNLHARAFLKVLLF
                     YELKFKRKRTFKNAPRTLDLDLLYFSQKVKRDEGCMVPHIGANQRISVILPLGLTKGL
                     "
     gene            4513..5943
                     /gene="flhF"
                     /locus_tag="R8X70_001349"
     CDS             4513..5943
                     /gene="flhF"
                     /locus_tag="R8X70_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HEF2929116.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRA
                     ALYEVMVAIEESDYEEHLKKMGKSLPPKKTIAKTLEKQNLEEKVNASIPQNNEDEDVI
                     LDFSNTRANLAKTKTSDTNYQDFPQSKINPNPTMGFNDFKERLSEVSNEISKVTNTPL
                     VDNYAPNPNYNKKIENFEKQINKLNDKIDLLADMMWDEKAEARNNLIIPPEFATIYKK
                     AKESGMLEKHLEAIMKATIENMPAAMKTNKDAVQRYFYSLLRNILPCRVESEIKKQKI
                     MMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQYAKMMKLPI
                     IDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQNKLAKTKEFLMHSNAEIDVSLVVS
                     ANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLIYETNIPLSFFSTGQEVP
                     DDIEVANSDFLVRCILEGFNKGKDNE"
     gene            5936..6802
                     /gene="flhG"
                     /locus_tag="R8X70_001350"
     CDS             5936..6802
                     /gene="flhG"
                     /locus_tag="R8X70_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HEF2929117.1"
                     /translation="MNNQANKLRSLMNQNGGKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMSDEVVV
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNRL
                     NLEFLGHLSASKDVSGSIKKRTLFTDENSASSDELKALASKLLYRLERKVLDNVTSRS
                     FSNFFRKIIERF"
     gene            6822..7178
                     /locus_tag="R8X70_001351"
     CDS             6822..7178
                     /locus_tag="R8X70_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929118.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSIISIEEAFDILISTCFITFMFY
                     VFIHIAIMNFIDIKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNESKERRKNAKRAA"
     gene            7159..7851
                     /locus_tag="R8X70_001352"
     CDS             7159..7851
                     /locus_tag="R8X70_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HEF2929119.1"
                     /translation="MQKEPPKAYAQMIKDEQDQLVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNDSFWGFARKRVNGAMLDFLRSLDVMSRNNRKIIK
                     DIDILIDEYFREHEEEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDDQLELYNED
                     DTLEKLEKEQLLEKIHEVLEDLKERDQLIIQLYYYEELSLKEISEILEISESRISQIH
                     KKLLKKLRERLV"
     gene            7851..8927
                     /gene="fliM"
                     /locus_tag="R8X70_001353"
     CDS             7851..8927
                     /gene="fliM"
                     /locus_tag="R8X70_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HEF2929120.1"
                     /translation="MAEILSQEEIDALLEVVDDNTNTPTASEKDGKDERNIVVYDFKR
                     PNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSPT
                     SFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILRI
                     IMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNICY
                     PVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEFL
                     ELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEIL
                     ERYEEERKAKASVYDEPEEEEEEI"
     gene            8924..9760
                     /gene="fliY"
                     /locus_tag="R8X70_001354"
     CDS             8924..9760
                     /gene="fliY"
                     /locus_tag="R8X70_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HEF2929121.1"
                     /translation="MINEFLKLFTNECTSTIEGLTGKSAEFSEYKEFDVSSQDTLKPP
                     LVYAVFNIKEGGKIGILAGAVLMSAIGEWMMGEEEISKNDQLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFEISSCEFVAENVDFKDFTKLYFFDVKIEDLEEQISLIVDQ
                     TLHNILSGKAADDGHAHSSSNSENKGFEISEELKNINLIMDVRLPVRVRIGNKKMLLK
                     DVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERLEQ
                     LR"
     gene            complement(9809..10408)
                     /locus_tag="R8X70_001355"
     CDS             complement(9809..10408)
                     /locus_tag="R8X70_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEF2929122.1"
                     /translation="MEKILKILLFLPILALSAKAEWVVKSYQEIKNERVIRQTYEQSC
                     GASSLATLLNILDDQKKFDELELLKIMSGQELYTDMVSFADLSDAVKKLGFQSNSYQI
                     NRENLDKLVNIPMLVKIEDDPRFPHFVVIINHKGNYLQVLDPSHGEYISSKNQFFSIW
                     DRYNKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF"
     gene            complement(10393..11247)
                     /locus_tag="R8X70_001356"
     CDS             complement(10393..11247)
                     /locus_tag="R8X70_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929123.1"
                     /translation="MKKIFLTFMVLVNCVFASDELNIDSLFKKQIGLRSITSFSLLST
                     GNANSYSLYPNITIGGDPTIWNDTKQVFLTQTFIYTLTPKFDILISGGGSYARQEYTN
                     FFTNAYSHKDRIGFDNLWLGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKS
                     QSLQASLRGYSDPVVYSIYTGFGYNQSRKFKTLKIEYGNSIYVGGDLSIILSPKITLD
                     LGAEQRFQTEQKINGYQNSEVRSIPTLSLGSTYSINSDTAVSVNASFGGSSASPDSIF
                     GISLWKKF"
BASE COUNT         4048 a         1870 c         1779 g         3629 t
ORIGIN      
        1 ttgattctac tatggacaaa aaaataaaat attatatctc aaataaaaca aagtattctt
       61 atcctatttt aaccaaggat gttcaatgct ctaattgcaa aaatttttac tcgatagaat
      121 ttgcttcaaa tttgaaaaaa atagaaaaag aatgcccatc ttgcaaaaca aaaatggaca
      181 ttaagcttaa agattagttt tttgccttgc ttacaatatt gatgatattt tgagcaactt
      241 catcagcaag ttctaagtgc gaagtaaagc ctacgcaaga gcaatttatc tcacctaaaa
      301 catatttatc attgcctttt tcatcattat ctaaaataaa atcagccgtc caaatcaatg
      361 gtaagtcgta attgcctaat ttttccctta ccttaggaag ttctcctaaa aacatatcta
      421 ccaaattttt ccaatcctcg ggtttatcat agcggtattg cgccccacta aaaagcgtag
      481 cagaaaaagc atcggcatct tcggctggtt ttttatgcac tacatttaca ggagtgttat
      541 aaagcattaa aagtcttatc tctccttctt taatgcgtgg taaaaaagtc atatctacaa
      601 gcataccatt atcacctatg atatattgct cacaaaaatc cataaattca cccagttctc
      661 tatgctctac atgattgtct tttgcttcgg tacatttgat tttagtatct aaaggcaaaa
      721 tatctccttt tacttcgccc tctacactca cacgccaaat tccctctcct gtagagccac
      781 gattttgttt taaaaccctt tcgcctttag ccaaactttt tggaaaattt tctttaaaag
      841 tcttgatatc atagtatgca taagtatcac ttggcacaag atctgtatct gcaagttttg
      901 ttaaagcgtc tttggctcca taacctatca tcgcatcagg atgaggcata cccacaagac
      961 cttcttggca aagttttctt agcatatcaa aatactcatt ttcttcttta agattgccag
     1021 gattaatacg cgaaacataa ccatcaaaat tttcttttac atagttataa atttcattct
     1081 ttttgcctac ttcaaaaaaa atcacctcgg cattccaacc cttagctttt aaagcattta
     1141 ccataggcat agtatctttt ctatagccat cttcaccctt atcgctaccg cctctaacct
     1201 caaaaaagac tatatttttt ttcattgcac tgctcctttt aagttaaaat ataaacaatt
     1261 atttcataaa aatgttataa aagttaaacg aataagaggc tttttctcct ataagatata
     1321 aaaaatttag aattatttta attctaaaaa attcgcattc aatctaagca cagtatcact
     1381 tatcacttta cctaaaaaat tggaactttg actctctaaa cgatttaaaa atctatcgat
     1441 tctaccctct tctttccaaa caggatttaa aactttagca agttcttgaa gttctttttt
     1501 tgcattttca taattgctta attcatcaat aagtcctaaa tcttttgcat tttgtgctaa
     1561 aaacaccctt gcatttgccc aatcttttct tttatctaat tccaaatcgc gttctttggc
     1621 tacaaattct gaaaaaagat cataactttc atcaatcaaa ttttgcaaaa attctctctc
     1681 ttcttcactc caagcccttg taaaagttcc tgcactctta aattcccctg cttgtatggt
     1741 ttgttcttta atccctattt tcttagccaa ctcactcaaa tcagcaccct gcataatcac
     1801 acctatagat cctataaaac tagcaggatt tgccaaaatt ttatttgctc ctactccagc
     1861 caagtaactc ccactcgcca tagtcccact tgcataagct ataacaggtt ttttagtctt
     1921 taaatcctta atagccaaag ctagctccat acttggagca aaagcacccc caggagaatc
     1981 tatcacaaaa agcacgcctt taatattatc attattttta gcactgataa ttttttccaa
     2041 aagttctgag ctatctaata tctcgccttt taagtcaatg cgttctaaat ttgcatatga
     2101 tgagcttgaa tttgagcttg gtaccaaaag ccaaatcacg atcaacaata aaacaaaagt
     2161 tttaaaataa gtattgataa attttatcac gctacccaaa cccttaaaaa atgattttaa
     2221 aatttgcatt cttttccttt tataaataat ttttgcactt ctttagcatt taaaataaat
     2281 tgcaatggcg cttgctcctt gttgcattct cctaattcaa atacactaaa atcagccatt
     2341 tttccttgct tgatttcacc taaatttaaa tttaaagctt tagctggata aagcgttgcc
     2401 atttgtaaaa gcttaggagc taattttaac aaatcaaaat ctgtatgcac aagcaaacta
     2461 gcacgcattt catctaaaat cgataaagaa atattagaac ttaaaccatc tgtacccaaa
     2521 tggatattta agccgctttt taaagccttt tttaaatcaa atgttttttg acttaaaaga
     2581 cgatttgaaa aagcacaatg ggtaatagaa tgtaaatttt tatcaagcaa atccatttct
     2641 tttaaataca cacaatgggt aaaaagcgtc ctaacacctt taaataattg aataaattca
     2701 ctagctttat aaagaggctt aggatctggc gtaaagtttt taaaccattc tttaaaccct
     2761 ccttttgcct ctttaagcca agcattttca gccttacttt ctaaaaaatg cgtactgatt
     2821 aataactttt gctttttagc aagattgatt gcaaattttg caagctctgg atgagttgaa
     2881 taagcagaat gcacagaaat agcaggtata aaaaactcat ctttaaattt taaagatttt
     2941 tcaaatcttg ttaaaaactc ttgtttttta tcttgaattt gggcttcatt tatgcctaaa
     3001 atttcattaa aaaatacaac acgcattcca ttttgacttg ctctaacaca aggatttaaa
     3061 tcgctgccaa agcttgaaat ttcacctata gtacctatac cgcttttttg cattttttga
     3121 atgtttttta atataagctc ttctttagct tgctcattta acatagaacg agagttaatc
     3181 acgcttttaa gccaaattaa aaattctcca aaatacaaag tggtcgaatt tgcgctaaat
     3241 tctaaatggg tgtgcggatt gataaaagca ggcaaaatga cgcaattagg gcttgttttt
     3301 ataagcttag cctctgggta tcgttttttt aattcttcta attcgcctaa ttctaaaatt
     3361 tcattctcaa aaacaaaggc tttgttttct aaaatactaa attgctcgtc acataaaaag
     3421 atatattttg cactgattat atacattctt ttttccttga ataaaatcac attgtagcga
     3481 aaatttattt taaaatgtta taataaaagg ttaaaaataa aaattttaag gcaaaattat
     3541 gaaagtaatg gtcatccaag gcccaaatat caatatgcta ggcgtaaggg aagttagaat
     3601 ttatggtgca atgaaaatgg aagacattca tactcaaatg aagatggcag cttctcaaaa
     3661 caatgttgaa ttagattttt ttcaaagcaa ttttgaaggc gaaattgtag ataaaattca
     3721 agaatgtctt ggtacagtag atggtataat catcaatgct gcaggctata ctcatacttc
     3781 agtagccatt cgtgatgcga tttctgcagt ggctttacct acgatagaag tacacatcag
     3841 taatgtttat cgcagagaag aatttcgtca aaaaagcctt atagctcctg tatgttctgg
     3901 atctatagta ggatttggtc cttttggtta tcatttagct ttaatgggca ttattcaaat
     3961 ttgcgagcaa gtaaaaaatt tgcatgctac gcaagcacag caaatgcaag ctggggctca
     4021 aaattaaaaa tgctaaaaat aaaaggagca agacgacttg aaacaagccg tttttttcct
     4081 tattttagcc aaaacaaaaa agaatttaaa taccttgctc tagtaggtct aggaagcaat
     4141 atagagccag aaaaaaaaag gtttaacaag ctttttcgtg taatgatgga ggatagaagg
     4201 tttaaaattt tagccacatc tccatttttg atcaatgaag cttttggttt taaagctcaa
     4261 aaagatttta cgaatgcagc aatgcttata caaacaaacc tacacgcaag agcttttttg
     4321 aaagttttac ttttttatga gcttaaattt aaaagaaaaa gaactttcaa aaacgctcct
     4381 agaacacttg atttagatct tttatatttt tcacaaaaag tcaagcgtga tgaggggtgt
     4441 atggtgcctc atataggggc taatcaaaga ataagtgtaa ttttgccctt gggcttaaca
     4501 aaaggattgt aaatgggaca acttatccat acctttactg tagaagatac agagcaaatt
     4561 atcccgaaag taaaagagga ttatggcgac aaagctttaa ttattaccaa taaacaaatt
     4621 cgtcccaaaa cacttaaccg cgctgctctt tatgaagtaa tggttgctat agaagagagt
     4681 gattatgaag agcatttgaa aaaaatggga aaatccttgc ctcctaaaaa aactatcgct
     4741 aaaactttag aaaaacaaaa tcttgaagaa aaagtcaatg cttcaatacc acaaaataac
     4801 gaagatgaag atgtgattct tgatttttca aatactagag caaatttagc aaaaaccaaa
     4861 actagcgaca ctaattacca agactttcca caaagtaaaa tcaatcctaa tcccaccatg
     4921 ggttttaacg attttaaaga acgcttaagt gaagtaagca atgaaatttc aaaagtaacc
     4981 aatacccctt tggtagataa ttatgcaccc aatccaaact ataataaaaa aatagagaat
     5041 tttgaaaaac aaatcaataa gcttaatgat aaaatcgatt tactcgcaga catgatgtgg
     5101 gatgaaaaag cagaagctcg caacaatctt atcattcctc ctgaatttgc aaccatttat
     5161 aaaaaagcca aagaaagcgg tatgcttgaa aagcatttag aagctatcat gaaagccact
     5221 atagaaaata tgcctgcggc catgaaaaca aacaaagacg ctgtgcaacg atatttttat
     5281 tctcttttga gaaatatttt accttgcagg gtagaaagtg aaatcaaaaa acaaaaaatt
     5341 atgatgcttg taggcccgac aggggttgga aaaaccacaa ctttagcaaa gctagctttt
     5401 cgttatgctt atggagataa gcgctataaa acaggtataa tcactttaga tacttataga
     5461 atcggtgctg tagaacaact tttccaatat gcaaaaatga tgaaacttcc catcatcgat
     5521 agtatagaac caaaagattt ggacgaggcg attaaaagtc ttaataactg cgaagtaatt
     5581 ttagtcgata ctataggaaa ttcgcaatac gatcaaaaca aacttgccaa aacaaaagaa
     5641 tttcttatgc attcaaatgc tgaaattgat gttagtctag tcgtttctgc taataccaag
     5701 catgaagatc tgatggaaat ttacaaaaat ttttcatttt taaatatcga cacccttatc
     5761 atcaccaaat ttgatgaaac taaggttttt ggaaatattt tctctttaat ttatgaaact
     5821 aatatcccac taagcttttt ctctacagga caagaagtgc ctgatgatat agaagtagcc
     5881 aatagcgatt ttttagttcg ctgtatctta gaaggtttta acaaaggaaa agataatgaa
     5941 taatcaagcc aataaactcc gtagccttat gaatcaaaat ggaggaaaaa aatcacaaaa
     6001 cactcatttt atagcgatta caagtggaaa aggtggagta ggtaaaagca ccattagcgc
     6061 aaatttggca aatgtacttg ctaataatgg atataaagta ggactttttg atgcagatat
     6121 tggcttagca aatcttgatg ttattttaaa tgttcgcatt caaaaaaatc ttttacatgt
     6181 tttgcgtgga gaatgctctt tagaagatat tttgatcgaa gtaaagccaa atttatggct
     6241 catccctggt gaaagcggtg atgaaatttt aaaatacaac gataaaaaca tttatgaaag
     6301 atttttaaat caagcaagta ttttagatga gcttgatttt cttatcatcg acacaggtgc
     6361 aggaatagga ggaaatatac tgaatttctt agaaatgtca gatgaagttg tagtagtaac
     6421 cgttcctgat cctgctgcga ttaccgatgc atatgcaacc attaaaacca cctctaagac
     6481 aaaagaaaat ttactgatgc tatttaatgt tgtcaaaaat gaaaatgagg ctttaaaagt
     6541 ttttgaaaat attaaaaaag ttgctgatgc aaatataaaa aatcgtttaa atttagaatt
     6601 tttaggacac ttgagcgctt caaaagatgt aagtggtagc attaaaaaac gcaccttgtt
     6661 tacagatgaa aattctgctt caagtgacga gcttaaagcc ctagcttcca agcttttata
     6721 taggttggaa cggaaagtgc ttgataatgt cacaagtcga agtttttcaa atttctttag
     6781 gaaaatcatc gaacgattct aagcaataaa gagaagatat tatgagacct gaaaattatg
     6841 tagcattttt taccgtttgc ggatttttta taggattggc ttttagtatt attagtatag
     6901 aagaagcttt tgatatttta atttctactt gttttattac ttttatgttt tatgttttta
     6961 tacacattgc tattatgaat tttatcgata ttaaaaaaat cagtgggcga attttcaata
     7021 aacatgatta tgaaaagact agcaataata ttataaatga cttagtcatt cgtgaaaaga
     7081 aaatggatat aatcttagaa aagcttaacg aagaaagaga agagcttaag aaaaacgaat
     7141 caaaagaaag acgcaaaaat gcaaaaagag ccgcctaaag cctatgctca aatgataaaa
     7201 gatgaacaag atcagctagt tttatcctat atgcctgcac ttcgtgcaat ggcttttaga
     7261 ctaaaagaac gcttgccttc tagcattgat gtaaatgatc taattagcat tggcgttgaa
     7321 gaaatgatca agctttcacg ccgctacgat aaagagcaaa atgatagttt ttggggattt
     7381 gctagaaagc gtgttaatgg cgctatgctt gattttttac gctctttgga tgtaatgagt
     7441 cgcaataacc gtaaaatcat taaagatatt gatattttaa tcgacgaata ttttagagaa
     7501 catgaagaag agcctgatga tgaatatcta gctaaaaagc ttgatttgga tgtagaaaag
     7561 attaaagaag tgcgcaccgc acatgctatt agctatactt tacccattga tgatcaatta
     7621 gagctttata atgaagatga tactttagaa aaattagaaa aagaacaact tttagaaaaa
     7681 attcacgaag tattagaaga tcttaaagaa cgcgatcaac tcatcataca gctttattat
     7741 tatgaagaac tcagtcttaa ggagattagt gaaattttag agattagcga gagtagaatt
     7801 tcacaaattc ataaaaaact tttaaaaaaa cttagagaaa ggctagtgta atggcagaaa
     7861 tactctccca agaagaaatt gacgctctac ttgaagttgt cgatgataat accaatacgc
     7921 ctacagcctc tgaaaaagat ggaaaagatg aaagaaatat agttgtatat gactttaagc
     7981 gtccaaatag ggtatctaaa gagcaactta ggacaattaa aggtatacac gataaactag
     8041 caagaaattt agcttctcaa atttcgtcca tgatgagaag tattgttgaa accaaacttc
     8101 actcggtgga tcaaatgact tatggtgagt ttttgatgtc gctaccaagc cctacaagct
     8161 ttaacgtttt ctctatcaag cctcttgatg gaaactgcgt tttagagatt aacccaagca
     8221 ttgcttttcc tatgatagat agacttttag gaggtcaagg cgatagctat gaggcttcgc
     8281 gagagcttac tgatatagag cttaatttgc ttgattctat tttgcgtatc atcatgcaaa
     8341 gacttaaaga aagctgggct acagtaactg aaatttatcc tagtatagaa gctaaagaat
     8401 caagccccaa tgttgtacaa atcgtatcgc aaaacgaaat cgttatcatg gtggtgatgg
     8461 aaatcatcat aggaaattca agcggtatgg taaatatctg ctatcctgtt gtccatttag
     8521 aaagtatctt gagtcgttta gcaaaccgtg atattatgat gggtgaaacc tcagccaaaa
     8581 aatcacgcaa caaagaactt aaaactttaa tcggtcgtgc tgaagtggta tatgaggcaa
     8641 ttttaggaaa aaccttaatt aatgttcatg aatttttaga acttaaacaa ggcgatattt
     8701 taaggcttga tagagaagca gacgataaag ctatagtaag tatcgataaa aaagatgttt
     8761 tcttagcaca aattggccta catcgcttta gaaaatctat taaaatttta gaacttatac
     8821 gcactgataa agatgaaatt aaagaaattc tagaaagata tgaagaagag cgtaaagcaa
     8881 aagctagtgt ttatgatgag cctgaagagg aggaagaaga aatatgatca atgaattttt
     8941 aaaattattt acaaacgaat gcacaagcac catagaagga cttacaggaa aaagtgcaga
     9001 atttagcgaa tataaagaat ttgatgtttc atcacaagat acactcaaac cgcctcttgt
     9061 ttatgcggtt tttaacatca aagaaggtgg caaaataggt atattagcag gtgctgtact
     9121 tatgagtgct attggtgaat ggatgatggg cgaagaagaa atttctaaaa acgatcaact
     9181 aggccctgat gaaatggacg ctgctaaaga agcaattcaa aacatcattt cggctttttc
     9241 taccacttta ggcgcacaaa aagacatacc aaaaatggat tttgaaatca gctcttgcga
     9301 atttgtagca gaaaatgttg attttaaaga ttttacaaaa ctttatttct ttgatgtcaa
     9361 aatagaagac ttagaagagc aaatttcttt aattgtagat caaactcttc ataatatttt
     9421 aagcggcaaa gctgcagatg atggccatgc acactctagc tcaaattcag aaaataaagg
     9481 ttttgagata agtgaagaac ttaaaaatat caatctcatc atggatgtgc gtttgcctgt
     9541 gcgcgtaaga attggcaaca aaaaaatgct tttaaaagat gttttaacca tggatatagg
     9601 ctcagtagta gagcttaatc aacttgcaaa cgatccgctt gaaattttaa tcggagataa
     9661 aagaattgct tatggcgagg tagtaattgt cgatggtaac ttcggcgttc aaattacaga
     9721 aattggttct aaaaaagaaa gattagaaca actaagataa aaagttttag cctacaaatt
     9781 aagaataata aatataaacg aattaaaact aaaacaaact aaaagggctg aaatcaaaat
     9841 gtaaagattt tggagtattt aacttaaaag gttttagctc ttttttagga gcaacaatta
     9901 aagcataacc acctttatta tatctatccc aaatactaaa aaattgattt ttggaactta
     9961 tatattctcc atgacttgga tcaagcactt gtaaataatt acctttatga ttaataatta
    10021 ccacaaaatg tggaaagcgt ggatcatctt caatttttac aagcattgga atatttacaa
    10081 gtttatccaa gttttctcta ttgatttgat atgaattgct ttgaaagccc agttttttaa
    10141 ctgcatcgct taaatctgca aagcttacca tatccgtata aagttcttgt ccgctcataa
    10201 tctttaaaag ttcaagttca tcaaactttt tttgatcatc aagtatatta agtaaagttg
    10261 ctaaagatga agccccacaa gattgctcat aagtttgtct tattactctt tcgtttttaa
    10321 tttcttgata agacttaact acccattcgg cttttgcact caaagcaaga atgggtaaaa
    10381 ataataaaat ttttagaatt ttttccataa gcttatccca aatatgctat caggagaagc
    10441 agagcttcct ccaaaactag cattaacaga aactgcggta tctgaattaa tgctataagt
    10501 agaacctaaa cttaaagttg gaatagaacg cacttcagaa ttttgataac cattaatttt
    10561 ttgctcggtt tgaaatcttt gctctgctcc taaatctaaa gtaattttag gacttagaat
    10621 aatagataaa tccccaccca cataaatact atttccatac tctattttaa gggttttaaa
    10681 ttttcttgat tgattataac caaatcctgt ataaatacta taaaccacag gatcgctata
    10741 tccccttaaa ctagcttgta agctttgtga ttttagataa aagtttttgg tttgattgat
    10801 tgctttttct ctttgaacga ctgcagtttg aaaggtaatt tgtggaatta aatctgcaat
    10861 gctatcgcct gtataaataa aacctagcca tagattatca aatcctatgc gatctttatg
    10921 ggaatatgca tttgtgaaaa aatttgtata ttcttgtctt gcataacttc cgccccctga
    10981 aataagtatg tcaaacttag gtgttagggt ataaatgaaa gtttgagtta aaaacacttg
    11041 ctttgtatca ttccaaattg taggatctcc gcctattgtt atattaggat aaagagaata
    11101 cgagtttgca tttcctgtgc taagtaaaga aaagcttgta atgcttctta agcctatttg
    11161 ctttttaaat aaactgtcta tatttagttc atcactagca aaaacacaat taactaaaac
    11221 cataaatgtt aagaaaattt ttttcattgt caatccttac attttaaata atcagctcaa
    11281 gttaatttta aaatttaatc cttgatattg aaaagtttat tattct
//
LOCUS       DAQUWA010000054        11041 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.054, whole genome shotgun sequence.
ACCESSION   DAQUWA010000054 DAQUWA010000000
VERSION     DAQUWA010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11041)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11041)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11041
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.054"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..973
                     /locus_tag="R8X70_001357"
     CDS             <1..973
                     /locus_tag="R8X70_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEF2929124.1"
                     /translation="IKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLTQSLTASNLPS
                     GGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTNGKNYLNLDYT
                     NKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSTTPMGIDAINTFSVDDS
                     FSPVFNANKGDVVNMGTIKANEIVLVGNKVENIKGTLQADKVDIKGDKVYLEDFGINS
                     THLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSAS
                     NEEMINSWKGFAKLVNEGIFGELKFKDVYLGKDIVVQSILWGLVMVL"
     gene            1441..3106
                     /locus_tag="R8X70_001358"
                     /pseudo
     CDS             1441..3106
                     /locus_tag="R8X70_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784453.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3147..5461
                     /locus_tag="R8X70_001359"
                     /pseudo
     CDS             3147..5461
                     /locus_tag="R8X70_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822858.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5779..6111
                     /locus_tag="R8X70_001360"
     CDS             5779..6111
                     /locus_tag="R8X70_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEF2929125.1"
                     /translation="MKKILVGLKLCVGVCIANDILIKKGENLYKKCIACHGANGDKIA
                     PGSKGNIKIGGLNKAYLIKQLQGYAAGKADNGGAKVIMYANMKNWKFTTSDIEAVSAY
                     IAQLPKAK"
     gene            6134..7897
                     /locus_tag="R8X70_001361"
     CDS             6134..7897
                     /locus_tag="R8X70_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006656736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEF2929126.1"
                     /translation="MEKPFLKSIILASCLLTRALSQQNKENAEALEQMIEISHYKNVP
                     QNENIQNTLKSKQSPLDIKMDKQDSLQEDTKKVLDKEGLVAPSSEEFRFKYKFFVDTK
                     EDGKTLTLEDLGINEVWLRESIIALKRSDLNVETLQEIVNIVSYYFQYHGYPSATAYI
                     PQQEITDSIQINIMLGKLGEYQVKNYSKHLKESAISSKLKESLQGKILRTKALEDAIY
                     KINEMSGIKASGSLVAGSEYETTDVIITIEDSKKANAMLFFGNYGSKGSGVYRAGVSG
                     ALNNLLGYGDSLNYFAQLSDEMQKSYGFTYNFFLGNLKVSPRVNKSNYELGEEYESLG
                     AYGSSLDLGVDLSYPLFINTTNSLYLTGGYVYRKLEDIYGSFGIDFNKESNAFYLGTE
                     GTIGLIPNNILSYNTQLTYGDIKPKSVFLENSPVMGEFWKFNAALNNAYYFNNKISHI
                     LNISYQKTIGDYQLDSSETATLGGAYGVRAYPNGFGEADSMILTTIGLRFNIFNPNFY
                     ITLFYEFAHGWNEDYLDNDINMAGREGKNDIFVDAVGLELLYIKPNGFYIKLDLAKAA
                     YKYEADGKRRDRLYTSMGFYF"
     gene            complement(7964..8329)
                     /locus_tag="R8X70_001362"
     CDS             complement(7964..8329)
                     /locus_tag="R8X70_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEF2929127.1"
                     /translation="MKQETRNYSLRMPLELKERLDNLSKNLSKPKSSIVREALEAYLN
                     EIEDFSFAVNALEELKDGDYSKASKKIDKVVENLQKESDDLGDFDFAIEALEELKDGD
                     YSKASKKIDKIVKNLKKPE"
     gene            complement(8343..8942)
                     /locus_tag="R8X70_001363"
     CDS             complement(8343..8942)
                     /locus_tag="R8X70_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEF2929128.1"
                     /translation="MLPKWDSSFSVHNAKIDDQHKKLFELAAKVEIVSDRSVSKNEVK
                     ELLAEFFNYMKDHFNDEEKYMQLIAYPAFEEHKKIHKEIIQTMINLIKDIKSTNDLKE
                     KLYIIAKKWLLEHILYEDMKVEKWRSSSLATDEGKDVSFEAADDSDDDKPQFYLYKCN
                     CPGKVHDVPYGIHQKIELQGHKFTCKICKQAITFFQKHS"
     gene            9077..9742
                     /locus_tag="R8X70_001364"
     CDS             9077..9742
                     /locus_tag="R8X70_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEF2929129.1"
                     /translation="MAARILLLEDDLSLSEIIEEFLIDEGYEVYLCTNAKEALELAYE
                     KHFDLWILDVKVPLGDGFSLLKELRACGKQTPAIFMTSLNTTEDLKEGYNAGCDDYIR
                     KPFELAELSIRIQALLKRAFSHKNEDYEDLGNGFKFSFTSQILYHFDKALTLPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWEYDEEPSELSLRAYIKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            9735..10940
                     /locus_tag="R8X70_001365"
     CDS             9735..10940
                     /locus_tag="R8X70_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEF2929130.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLAIFFTLWYQKLYEELVVVKGTSL
                     RENHRNIIINILNSRFVPMNESASNIAQSTGLKFAIFDKKQAIFDNLDFDFRKAKVEL
                     KGRGIYDGKVFFLDRMNTDNYFLKHTNEDNANTESGLKILIQGEDVKKDLIWIRIKVF
                     SFAIMAFCILGLIAYILVKIALKPLEDKIITLNRFIKDSTHELNTPLSVILMSIEQLE
                     NQKLEYNTKFTRIKLAAKSLSQVYSDLVFYNFPNTLELNKQELDLKALIEERLEYFKI
                     FFEQKKISLKLNLHQASIFASKNQISKLIDNLLSNAIKYNKKGGEISIELKTGFLSIA
                     DTGCGISKPNLKHIFDRYARFNTDQGGFGIGLSLVKKICDDNDIKIICESVENQGSVF
                     ELSWSAKKI"
BASE COUNT         3994 a         1483 c         1945 g         3619 t
ORIGIN      
        1 cataaaacat tttttaaata cttcatcata ctttactaat catcttagca aatctttaag
       61 agttattgta aatatttctg taattacaag tttggtttta actcaaagct taacagcatc
      121 aaatttacct agcggaggta agtttatcaa tggaactgga agtattgcta caaatggcaa
      181 tataatgaat atcacaggag ataaaacaca caatgtgatt gcttggggcg gtggatttaa
      241 tatcggaaaa gacaatactg ttaatttcac tacaaatggc aaaaactatt taaatctaga
      301 ttataccaac aaagcttctc aaattctagg aactttaaat ggtggaacta acaatgttta
      361 tattgtaaat cctagtgggg tattagtagg cgaaggagct acaatcaatg ctaataaatt
      421 tggagtttct acaactccaa tgggtataga tgcaatcaat actttttcag tcgatgattc
      481 tttttctcca gtttttaatg ccaataaagg cgatgtggtt aatatgggaa ctattaaagc
      541 caatgaaatt gttttagtag gaaacaaggt agaaaatata aaaggaacac ttcaagcaga
      601 taaagtagat atcaagggag ataaggttta tttagaagat tttggaatca actctactca
      661 tttaaaagca gaaattggga gtgaaggctt ttttaaatat gaggtaaaag atgtatatga
      721 tgcctataaa gatgattcaa atttagttga taattatgag tttactggta ctgctactac
      781 taatggaaat tttaaagaat acctttacat tggatctcaa agtgcaagca atgaagagat
      841 gattaattct tggaaaggat ttgcaaaatt agtcaatgag gggatatttg gagaattaaa
      901 atttaaagat gtatatttag gcaaagatat tgtagtacaa tcaatcctgt ggggtttggt
      961 aatggttttg taggtaattt ttatggtaat aaccatacac tttctaatat acaaattgat
     1021 gttgctgata aaacttatgt aggattattt ggttatatta agggtgggag tgtgcaaaat
     1081 ttaactattg atggattgca atttcccaaa tatgcctttt cttataaata cctaggagga
     1141 cttgcagggc atatagaaaa tggaactttt aataatatca gtttaaaaaa tctaggcaac
     1201 attggagttg cgaaatatgc aggtggcttt gctggtcaaa ttaacggtgg agatttttca
     1261 agtattattt taagtaatat agaaagtatt tatggtaaga ataatggtgg gggttttgta
     1321 ggatatacaa cgggcaatac aacttttgat ggcatcagtt taaaagatat aagatttatt
     1381 aaatctgggg cttttacagg tggttttgcg ggaatgacac aaggtaatgt gatatttgag
     1441 aatattgttc taaatgattt agaagagatt agtggtagtc atgcaggtgg ctttgctgga
     1501 tggataaatg atggaacttt taacaacatc attttaaata atatagaaaa atcagtgtta
     1561 gcgctacaca taaatatatc tttacaggtg gctttacagg atatgcaggc gctggaactt
     1621 ataaaaatat tattttaaat aacataggag aaattagcgc caatggtacc gctagtctgg
     1681 atgaaaaatc tatttatgca ggtggatttg cggggagaat aaaaagtgat ggtataaatt
     1741 tttcaaatat tgttttaaac gacatagata aaattagtgc tagtattgct gcaggtggat
     1801 ttgttggaaa tatagagaat ggtagtaaca ttgccaattc taatatttac ttctatgggt
     1861 tattaaattc atcgtcgaac aagaattata ttacccacaa tgaaaatatc ctaaatctat
     1921 caaatacaac tgattttcaa actcttatta atcaaagcaa aattgcaggt ttggagtatc
     1981 ttacaaatac ttccactagc aactcccatc ttcatatgat aaatggtggt aaaataggaa
     2041 atgagaaatc caaaatcacc ttcgataagg ataattttac ttacaatact ccaaaaatat
     2101 cagaggtaga tcccgacgga tcaggatcaa gctcttcacc tacagctcca aacgaaggag
     2161 agctttcaag tattactctt gaacagagtg attttgaaga tgaaatttta aaaaccatca
     2221 tcgatgaaat tttaaatgag gattatgtgt taaatataga ttctatcgat tttaacaaat
     2281 tcaatgaagg tgatgtggct attcttttat atctattaaa aaatacaagc gataaaaagc
     2341 taaaagaatc tttaaaacaa tccttagaat tctatactga atttaacaaa ggaggattaa
     2401 aaacagaatt tgaaaaatgg tatggaagtg atgaaagtac ttacaaaacc tctatgggta
     2461 aatacaatta tatcattgag agtcttgcca atctaaaaga gtatgtaaac actactttaa
     2521 aacctgaatt agaaagtatt aaaaacaatc tcaatcgatt ggaattttta aaagctgaaa
     2581 taaaaagatt agaaagagtc tatcaaaaag ctatgcaaaa tgatttactt ccttatgatc
     2641 agttagaagt tgtctataaa aacacacaag aaaaaatcga tgcttactat gctgaagcac
     2701 agggtttatt ggatattctt aaaaacaaaa ataaaccttt tttagacgtt taattactaa
     2761 agaatattca tttgaagata aatatactga tattcaaggg acatttgcta tcgcaggaag
     2821 tagtattgat gctaatgcca tcgaaaattt ggcagataaa cctattttat ctcttccaga
     2881 aaatgagaat tcaggagata gccaaactac aaacaacaca gatagcacag atatagttaa
     2941 tactttttct aaacaagtaa aacttacctc tacagagtct attcttattc ttcctgcaga
     3001 agaaacacaa agtcatatca aagaagacga aagagaacga ggaagagttt gcatcacaag
     3061 tgacaatgca aaaactaata atccttgtat agcaatcaca ttttaatcaa atataatttc
     3121 aatttattaa gttgaggggg aaaataatgc aggtgaaatt ttttctaaaa aatagaatat
     3181 ttttatcttt tgcgagcgta gctttgatat ttaatagcgt atcgtatgca gcaagtcaag
     3241 ctatatctat aggcgataaa agatttcaaa ctccaaggca tagtttttct aatgaggaag
     3301 tttgggattt tgatgacaaa acctttaagc aaatcaatgg cactaattat tatggtgtat
     3361 ttaaacaagg acttgtaagc aacatcactt tagaagtttt taaccctaag cagtctttac
     3421 aaggcgctaa gcttgaaatt ttaactctta atcattcctc agaagaaatc ttggaagtgc
     3481 aaagtatgca tgctgctaac cctatggata aaaacttgca tcctataaaa atccttcctt
     3541 ttttagtggc cgggagttct ctaaagggag attctatcaa caataaactt cttattaaag
     3601 aggcagaatt aagctctgcg gtttttctag agccaagcaa cataaaaaca aaaaatcctc
     3661 caaaaaaaga agagaaagat aaaataaatt atgttattag tggtgggctt gctagagaag
     3721 gaaatgcgaa aaataatacc ttagaacttc ttgatggaag ttatataaat atgggagtag
     3781 aaaatattta taatcttaaa ttaaacggag ctccttatgc tgtaggaggg cttgctatct
     3841 ttggtgatgc gataggaaat tctttgcttg cccaaaaagg ctctaaagta gatattcaca
     3901 ctgcctcttt ttatagagat atggtagggg aatttattct tgatgaaagg ataacccatc
     3961 ttgttggagg attagcctat aatggaaagg ttgaaaaaaa taaacttaat cttaatgggg
     4021 tggaattcaa catccatgct ccaagcggtt tgtattcttc ttttgctcct gttcatatcg
     4081 cgggagcttt tgttgatggg aatggtaaaa aagcttatga tgcaaccaaa aacacccttg
     4141 ttatagataa ttttctttta aatttaagag cggatggaaa aactcccatt ttttataacg
     4201 ctatttttta gcaaatttct ttggaggaaa gacaaataaa ggggatgcaa atgcaaactc
     4261 cattgtctta aaagatgttc ctgcgctaaa aagaataagt aaaaaagtga aagtacaagg
     4321 gatttatgat ttctttagtg gatacacact tgatggagag gctaatttta ataccttaga
     4381 tatcgagtta aagtcccctt tacaagtgag taattcttat ttaagacaca gcggttttgg
     4441 gttttatggt gcttttgcaa gcaaggatgc aagcaataat accattaaga ttagaaataa
     4501 cctcacagta atcaatggca cacaaaatcc tagtgatagg atcaatatca ttacaggaag
     4561 aactttagca ggagaggcta attttaatgt gattgatttt aaagattctc aagcttctct
     4621 accacttttt atttatgcaa ccacacaaga aaactttgaa ggatctatcc attatccaga
     4681 gtatgcaaaa cacaataaga ttagcttaaa taatatcttt ggaagaaagg atattcgctc
     4741 tggagtagag gctatgaatg tagaaaacaa tcaagtcttc tatcacaatg tagaagcaca
     4801 agcttctgga gagggagtta atagagaaag cagtgtgtat attagagcag ccaatcttgc
     4861 aaagaataat ctctttaaag caagcaatta ttgggcgact tctatgctta atatttatgg
     4921 tattcgtgag gtggaagaat ctaaaaataa tcaagttatt tttaataatg taggctttaa
     4981 tactgataga atttctgaag gttcggaatt gattttaata ggtggagttg gcaagagagt
     5041 acatcacaat cttttaagta ttcaagattt agaaattgga gcttatgata aagaaaaaga
     5101 ttttatctat attgcagcaa gtgcaattcc tgatgccaat agcaatctag cactctctta
     5161 tggcaataca ctctatattg gtggagatgt ttctatccat gagcgatcgc ttttaaatgt
     5221 gctaagtggg agtgtgatta gaattccaaa ctatacaaat aataaagccg atgatatcac
     5281 actgcctgca ccttctttgg cgcagcttac aaaagataac catttgattt tagagcaagc
     5341 tctgagggct agagtagtta ataactttga acattatagt ttaatttatc attctaataa
     5401 tcaagataaa ccttttattg aaagtttaga gactcctatt aatctctctg aagaatccta
     5461 aatcactcta cttttaaaaa agggagaaaa agctcctgaa aaaggaagta aaattgcatt
     5521 aatttcaagt caaaatggtt ttagtggtat taatggcaat gctatgaata aaagccaatt
     5581 aaatcaactc ttagggagga tttctaaaaa tccaaaaaca cttaattata aaaagattcc
     5641 tcagctccaa caagaaaacc taagggttgt tcctttaact ttatctttag ataataaagg
     5701 aaaagtgatt tatggagaaa tccaaagtga ttaaaaatca ataacttaac aaagaaaatt
     5761 ttaaaagaag gacaaaaaat gaaaaaaata ttagtgggtt taaaattgtg tgtaggagta
     5821 tgcatagcga atgatatcct aatcaaaaag ggagagaatc tttataaaaa atgtattgct
     5881 tgtcatggcg caaatggaga taaaatagct cctggaagca agggtaatat caaaatcgga
     5941 ggattaaata aagcctatct cataaaacag cttcaaggct atgctgcagg gaaagcagat
     6001 aatgggggag caaaagttat catgtatgct aatatgaaaa attggaaatt taccacttcc
     6061 gatattgaag cagtgagtgc ttatatcgcc caattgccta aagcaaaata aaaaatacaa
     6121 agcaaggaaa tttatggaaa aacctttttt aaagagtatc attctagctt cttgtctttt
     6181 aacaagagca ctttcgcaac aaaacaaaga aaatgcagaa gctttagagc aaatgataga
     6241 gatttcccat tataaaaatg tccctcaaaa cgaaaacatt caaaatactc taaaaagtaa
     6301 acaatcccct ttagatatta aaatggataa acaagattct ttacaagagg atactaagaa
     6361 agtcttagat aaagagggat tagtagcacc aagctctgaa gaatttcgct ttaaatataa
     6421 attctttgtg gatactaaag aggatggaaa aacactcact ttagaagatc ttggaatcaa
     6481 tgaagtatgg cttagagaat ctattattgc tctaaaaaga tcggatttaa atgtagaaac
     6541 cttgcaagaa attgtcaata tcgtttctta ttattttcaa taccatggtt atccatcggc
     6601 aactgcctat attcctcaac aagagatcac agattcaatc caaattaata ttatgctagg
     6661 aaaacttgga gaatatcaag ttaaaaatta ttctaagcat ctaaaagaga gtgctattag
     6721 ctctaagcta aaagaatcac tccaaggaaa aattttaaga actaaagcat tggaagatgc
     6781 gatttataaa atcaatgaaa tgtcaggaat taaagcaagc ggaagtttag ttgctgggag
     6841 tgagtacgaa actacagatg tgattattac aatagaagat tccaaaaaag caaatgcgat
     6901 gcttttcttt ggtaattatg gaagcaaggg ctctggtgtt tatagagctg gtgtgagtgg
     6961 cgctttaaat aatctcttag gatatggaga ttctcttaat tactttgcac aactttctga
     7021 tgaaatgcaa aaaagttatg gatttactta taattttttc ttaggaaatc tcaaagtttc
     7081 tcctagagtg aataaaagca attatgaatt aggagaagaa tacgaaagtt taggtgctta
     7141 tggaagttct ttagatttag gggtggattt atcttatcca ctctttatca acacaactaa
     7201 ttctctatat cttactggag gttatgttta tagaaagctt gaagatattt atggaagctt
     7261 tggaattgat tttaacaaag aaagcaatgc cttttattta ggaactgaag gaactatagg
     7321 tttaattcct aataacattc ttagctataa cacgcaactt acttatgggg atataaagcc
     7381 aaaaagtgta tttttagaaa atagtcctgt catgggagaa ttttggaaat ttaatgcagc
     7441 tttgaataat gcttattatt ttaataataa aatttcacac attcttaata ttagctatca
     7501 aaaaactatc ggagattatc agctagattc tagtgagact gcgactttgg gaggagctta
     7561 cggcgttaga gcttatccta atggatttgg agaggcagat agtatgattt taacaacaat
     7621 tggactaaga tttaatatat ttaatcctaa tttttacatt accctttttt atgaatttgc
     7681 ccatggatgg aatgaagatt atttagataa tgatatcaat atggcgggta gagaaggaaa
     7741 aaatgatatt tttgtggatg cagtggggtt ggaattgctt tatattaaac ccaatggatt
     7801 ttatattaaa ctagatttag caaaggcagc ttataaatac gaagcagatg gaaaaagaag
     7861 agatagactc tatacaagta tgggatttta tttttaaggc ttttaaatca attttacagc
     7921 caagaaactt tatcgcattg tgataaagtt tctataaaag tttttattca ggttttttga
     7981 ggtttttaac gattttatct atctttttac ttgcttttga ataatctccg tcctttagtt
     8041 cttctaaggc ttcgatagca aaatcaaaat cacctaaatc atctgattcc ttttgaagat
     8101 tttccacaac cttatctatc tttttacttg cttttgaata atctccgtct tttaattctt
     8161 ctaaggcatt gactgcaaaa gaaaaatctt caatttcgtt aagataggct tctaaggctt
     8221 ctctaactat acttgattta ggcttggaaa gatttttact caaattatct aagcgttctt
     8281 taagttctaa aggcattcta agggaataat ttctagtttc ttgtttcatt aacttaacct
     8341 ttctaggaat gtttttgaaa aaatgtaatt gcttgcttac agattttgca agtgaatttg
     8401 tgcccttgta attcaatttt ttgatggata ccataaggga catcatgtac tttacctggg
     8461 caattgcatt tataaagata aaattgcggc ttgtcatcat cactatcatc tgctgcttca
     8521 aagctgacat ctttaccttc atctgttgct aaagaagagc ttctccattt ttctaccttc
     8581 atgtcttcat agagtatgtg ctctaaaagc cattttttcg ctatgatgta aagtttttcc
     8641 ttaagatcat ttgtagattt gatatcttta ataagattaa tcatagtttg tatgatttct
     8701 ttatgaattt ttttatgttc ttcaaatgct ggataagcaa tgagttgcat atatttttct
     8761 tcatcattaa aatgatcttt catgtaattg aaaaattcag ccaaaagctc ttttacttca
     8821 tttttgctta ccgatctatc agaaacaatt tcaacctttg ctgcaagctc aaaaagtttt
     8881 ttatgctgat catcaatttt ggcattgtgc acactaaaac tgctatccca ttttggaagc
     8941 attttgactc cttgaaaaat ttatttgcat taaagattat aacataaaaa taagttaaat
     9001 ataaattaat ttgtattaaa ccattttttc aatatttttt gatacaattt caagaaatat
     9061 caaagaaagg tgtcttgtgg cagctagaat tctgctttta gaagatgatt taagtttaag
     9121 tgagattata gaagaatttt taatcgatga gggttatgaa gtttatttat gcaccaatgc
     9181 taaagaagct ttagaacttg cttatgaaaa acattttgat ttgtggatac tagatgttaa
     9241 ggttcctttg ggtgatggat tttctttatt aaaagaatta agagcttgtg gaaaacaaac
     9301 tccagctatt tttatgactt ctttaaatac gacagaagat ttgaaagagg gttataatgc
     9361 aggttgtgat gattatatac gcaagccttt tgagcttgca gaactttcaa ttcgtattca
     9421 agctttgtta aagagagctt tttctcataa aaatgaagat tatgaagatt tggggaatgg
     9481 gtttaaattc agctttacct cacaaattct ttatcatttt gataaggctt taactctacc
     9541 cagtaaagag atcaagctat tatctttgct tttaaaaaat aaaaataatt ttttaagtac
     9601 agaaagaatc tttgaagagc tttgggagta tgatgaagaa cctagcgagc ttagtttaag
     9661 agcgtatatt aaaaatttac gcaaaatatt aggaaaagaa aaaattatca atcaaagggg
     9721 tagaggatat tgctatggct aaaaaagtca ttaggcaaat tttattgatt tatttaacta
     9781 ctacgggtat ttttttagca atctttttta ccttatggta tcaaaaatta tatgaagaat
     9841 tagtggttgt aaaaggtact tctttaagag aaaatcatag aaatatcatt ataaatatcc
     9901 taaattctcg ttttgttcct atgaatgaaa gtgctagcaa tattgctcaa agtactggac
     9961 ttaaatttgc tatttttgat aaaaaacaag ctatttttga taatttggat tttgatttta
    10021 gaaaagcaaa ggttgaactt aagggcaggg gaatttacga tggaaaagta ttttttcttg
    10081 atcgtatgaa tacagataat tattttttaa aacatacaaa tgaagataat gcaaatactg
    10141 aaagtggatt gaaaatttta attcaaggtg aggatgttaa aaaggatctt atttggatta
    10201 gaataaaggt tttttctttt gctattatgg ctttttgcat attgggtttg atagcttata
    10261 ttttagtaaa aattgcccta aagccactag aggataagat tatcactctt aatcggttta
    10321 tcaaagattc aacccatgag cttaacaccc ctttaagtgt gattttgatg agtatagaac
    10381 aacttgaaaa tcaaaaacta gagtataata ccaaattcac aaggataaaa ttagctgcaa
    10441 aaagtttatc tcaagtgtat tcagatcttg ttttttataa ttttcccaat accttagagc
    10501 ttaacaaaca agaacttgac ctaaaagcat tgattgaaga aaggctagaa tattttaaaa
    10561 tattttttga gcaaaagaaa atcagtctaa agcttaattt acatcaagca agtattttcg
    10621 cttctaaaaa ccaaatttct aaactcatag ataatctttt aagtaatgca atcaaataca
    10681 acaaaaaagg tggggaaatt tcgatagagt taaaaacagg ttttttaagt atcgcagaca
    10741 caggttgtgg aatttcaaaa ccaaatctta agcatatttt tgatagatat gcgagattta
    10801 ataccgatca aggaggcttt ggcatagggc tttctttggt gaaaaagatt tgcgatgata
    10861 atgatattaa aatcatttgc gaatctgtag aaaatcaagg gagtgttttt gagttaagct
    10921 ggagtgcaaa gaagatttga aaaaggacaa taaaattttt gcatccatgc ttgaaactct
    10981 ctctataaac attttctcat tttataatag ttattatcaa taaaaattta tttttctata
    11041 a
//
LOCUS       DAQUWA010000055        11030 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.055, whole genome shotgun sequence.
ACCESSION   DAQUWA010000055 DAQUWA010000000
VERSION     DAQUWA010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11030
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.055"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..619)
                     /locus_tag="R8X70_001366"
     CDS             complement(<1..619)
                     /locus_tag="R8X70_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929131.1"
                     /translation="MKKVFPILISLCSLSLANVYEKLNDFAYEKKPNKDFKIQEVKLV
                     QFLQDDKNCLELLIEAGRVRILKSYNECQKLSKDADFQKFLNEDFLRLYKNNGYSINE
                     NLQDLKKAMQDIMIYYKLRFAFSKNIQDMSKNKNLSILNIDEKEGGTLLYKINNQACV
                     AIELARHNSRMAMKVYGMENLDKECKLFIQAPSFKNISFTKNDFKW"
     gene            complement(616..858)
                     /locus_tag="R8X70_001367"
     CDS             complement(616..858)
                     /locus_tag="R8X70_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929132.1"
                     /translation="MPQTHNKNLKNELEDLRYELSIVLEAMLLYAGVKREKLESAIEA
                     YIDNIDSVLENSNKEGVDEVLEVVEFLKNQHSELFQ"
     gene            complement(839..1891)
                     /locus_tag="R8X70_001368"
     CDS             complement(839..1891)
                     /locus_tag="R8X70_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HEF2929133.1"
                     /translation="MKIYHLSHTDLDGYACQYIVNFYFKNVNFYNSNYGKEINENFNA
                     ILADIEKDNSFGQAIILITDLNLNLNQCEEFDKICKEKNIKIFLLDHHQSGEECAQKY
                     AWYLLDNQRCATKITYDFFSKICKPDLELLNFAQVVNAVDIWLSEDANFELGKVFLGL
                     IANAKEINRVMFKEAQVFYMFFLLERARKFINQPNSHILLDNAIHFIKKDFFAKNHDD
                     TLSNLISYFVVEKLSELKEEFSIEYEGHKGILTSNIGNTSIIGNEFLVKNPDYDFFID
                     VSSRKTLSFRANGKIDVSLMAKKLVGGGGHKNASGGLFAAYKDGANYNYIKAQIVDLI
                     KSKELKKGNSDATNTQ"
     gene            complement(1900..4077)
                     /gene="flhA"
                     /locus_tag="R8X70_001369"
     CDS             complement(1900..4077)
                     /gene="flhA"
                     /locus_tag="R8X70_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HEF2929134.1"
                     /translation="MAKNKLVDLVFPFLGPLIGPVLRAKSLTIVGFIVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPAAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEIIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGAFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPHLSLGFMALVFLGLGYLTK
                     QVKEGKIEVNAPKKAKASAANAASGAGGAGGVTAPAKKSEEEILKEEEHKINDILKVE
                     ILELELGYGLIKLAESELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLK
                     GVSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIV
                     IDPASVISTHMSELIKAHASELLTRQEVQNLLDKVKNDYPIIVEGALGVAPVSLIQKI
                     LKDLLKHNIPIKDMLTILESISDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLD
                     IFILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCV
                     EPQLRKFIADICYNFNINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            complement(4064..4474)
                     /locus_tag="R8X70_001370"
     CDS             complement(4064..4474)
                     /locus_tag="R8X70_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HEF2929135.1"
                     /translation="MLFTKASEYALLSLIYIAHKENPQDVDSLALELNIPKSFLAKIL
                     QTLAKDNLLKSFKGAKGGFALIKEPSQYSIKEIVNSAEKKEVSVFECSGGVCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSLTLADIMNHNGKK"
     gene            4640..4912
                     /gene="rpsO"
                     /locus_tag="R8X70_001371"
     CDS             4640..4912
                     /gene="rpsO"
                     /locus_tag="R8X70_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEF2929136.1"
                     /translation="MALDSAKKAEIVAKFARKAGDTGSTEVQVALLSARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLAYLKRKDYNSYSKLITELNLRDK"
     gene            complement(4983..7952)
                     /locus_tag="R8X70_001372"
     CDS             complement(4983..7952)
                     /locus_tag="R8X70_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HEF2929137.1"
                     /translation="MLAPDMGVWLYKANLFLFGEFAYYYPFFLFILNYVYYKRNYKLA
                     NFTRRELFGIGFAFFSSLLLFAVFYPNSGYILELAYAIFSTILGHTGSGIFALLLLFF
                     SFILLFPKTTKELFKIEINFNILLKIENALKVLLMRVFGGENEKDDLSKIEPKAPIVT
                     LEKNTAFVQEKIQHENENLNLNPTEELVKYSNINASKNSIITAKENFEKLKNQILDEK
                     VEIDKESIKEAKSFIYENSQQVRNFAQKASRMSIKLDEDFNFISEEEVDMIPERFLKP
                     KKLEDIKQIDTSNKNLDEPSYKRKNIEISIPKQEIKPKIFTKELELRENLMKEAKLEQ
                     EYKAYQNEILENKVQEEIKELEKKDSLEPNLNHIIQGSKYNFGTPLQEVSSAKEEIKT
                     QNAPIPSILEKTNEVEIIDFDESEIEIKKMESINKSIHDFIPIVEELEHPYIEPTPIV
                     KIEELEPLNNQINKQIPIQEKDEITEQDNSFSKEQISQEPSQEITRQKAILAKEIELN
                     KALLREIEQGEMEKPKDFELPPLEFLTNPSHNKQEINESEIDKKIYNLLEKLRRFKIG
                     GDVISTYIGPVVTTFEFRPSADVKVSRILNLQDDLTMALMAKSIRIQAPIPGKDVVGI
                     EVPNDEIQTIYLREILESEVFKNAKSPLTIALGKDIVGNAFVTDLKKLPHLLIAGTTG
                     SGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYNDIPHLLTPVITDPKKAVNA
                     LSNMVAEMERRYRLMAEAKTKNIENYNEKMKELGEEELPFIVVIIDELADLMMTAGKD
                     VEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYKVGQKIDSKVILD
                     AMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKIVDFLKDQQSVEYDESFLKD
                     QQSMGVTSSESMNNGEYDELYEDAKRVILSDGKTSISYLQRKLNIGYNRAANIIDQLT
                     ESGVLSEPNSKGQREIL"
     gene            complement(8063..10315)
                     /gene="flgL"
                     /locus_tag="R8X70_001373"
     CDS             complement(8063..10315)
                     /gene="flgL"
                     /locus_tag="R8X70_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HEF2929138.1"
                     /translation="MRITNKLNFTNSISTSMGAQSSLYQISQQLSSGIKIQNSYEDAS
                     VYIDNTRLEYELKTLEQVKQATNSAKEMTQNSMKALQDMVKLLEDFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFADNRWDLNKDPDKTKYLTGDSKW
                     QQLIGQGYVKDNSLDADKDFEYDDSKLDFPPTTLYVQGTRPDGTSFKSAVLVKPEDTL
                     EDVMENIGTLYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKLDFHAVAFTPQADTKDE
                     LKNIIEAANQEGISMNEVTNRVMQAATAAPSNGDITKLNNPVTVTINNQQFTIDLKQT
                     DFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMA
                     GDSLNGTTLNLKVNSKGGNSYDVAINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNS
                     GVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVD
                     VSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSL
                     TIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNT
                     TMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQTQLAYQASLKASTT
                     IAQLSLLNYM"
     gene            10566..10652
                     /locus_tag="R8X70_001374"
     tRNA            10566..10652
                     /locus_tag="R8X70_001374"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10600..10602,aa:Leu,seq:caa)
BASE COUNT         3502 a         1913 c         1551 g         4064 t
ORIGIN      
        1 accatttaaa atcatttttt gtaaaagaaa tattcttaaa agatggagcc tgtataaata
       61 atttgcattc tttatctaaa ttttccattc catagacttt catagccatt ctagaattgt
      121 gtcttgctag ctctatggct acgcaagctt gattgttgat tttataaaga agtgtgcctc
      181 cttctttttc atctatattt aaaatgctta aatttttatt tttactcata tcttgtatat
      241 ttttactaaa agcgaaacgc aatttataat atatcataat atcttgcata gcctttttaa
      301 gatcttgcaa attttcattg atagaatatc cattgttttt atacaatctt aaaaaatctt
      361 cattaagaaa tttttgaaag tcagcatcct tgcttaattt ttgacactca ttatagcttt
      421 taagaattct tacccgccct gcttctatca aaagctcaag gcaattttta tcatcttgta
      481 aaaattgcac caatttaact tcttgaattt taaaatcttt attaggcttt ttttcatatg
      541 caaaatcatt gagcttttca taaacattag caagtgataa agaacaaaga ctaataagta
      601 tcggaaatac ttttttcatt gaaaaagctc tgaatgttga ttttttaaaa attctaccac
      661 ttctaaaact tcatcaaccc cttctttgtt tgaattttcc aagacactgt ctatattatc
      721 tatataagct tctatagcac tttctagctt ctctctttta acacctgcat ataaaagcat
      781 agcttctaaa actatgctta attcatatct tagatcttct aattcatttt ttaaattttt
      841 attgtgtgtt tgtggcatct gaatttcctt ttttaagttc tttacttttt atcaaatcaa
      901 cgatttgagc tttgatatag ttataatttg ctccatcttt ataagctgca aaaagcccac
      961 cactagcatt tttatgccct cctccaccta ctagcttttt agccatcaag cttacatcaa
     1021 tcttaccatt tgcacgaaaa cttaaggttt ttctagagct tacatcgatg aaaaaatcat
     1081 agtcgggatt tttaactaaa aattcattac ctatgataga ggtattgcct atatttgagg
     1141 taagaattcc cttatgaccc tcatattcta tactgaattc ttcttttaac tcgctaagct
     1201 tttctactac aaaataagag atgagattag aaagagtgtc atcatgattt ttagcaaaaa
     1261 aatctttttt aataaaatgg atagcattat ctagtaaaat atgtgaattg ggttggttta
     1321 taaattttct tgctctttca agcaagaaaa acatataaaa aacttgagct tctttaaaca
     1381 tcacacgatt gatttctttt gcattggcaa tcaaacccaa aaaaactttt ccaagctcaa
     1441 aattcgcatc ctcacttagc caaatatcaa cagcatttac aacctgagca aaatttaaaa
     1501 gttctaaatc aggcttacaa attttagaga aaaaatcata agtgatttta gtcgcacatc
     1561 tttgattatc cagtagatac cacgcgtatt tttgagcaca ctcttcaccg ctttgatgat
     1621 gatctaataa aaagattttg atattttttt ctttacaaat tttatcaaat tcttcacact
     1681 ggtttaaatt taaattcaag tcagtgatta aaataatagc ctgcccaaaa ctattatctt
     1741 tttctatatc tgctaaaatt gcattaaaat tttcattgat ctctttacca taattagaat
     1801 tataaaaatt tacattttta aaataaaaat tgactatata ttgacaggca tagccatcaa
     1861 gatcagtatg tgaaagatga taaattttca ttgatttcct taaagttcta tcctaataat
     1921 accttcggta ttaaaatttg tattttctgc tatttctgca aaactgagta caactatatt
     1981 gatattaaaa ttatagcaaa tatcagcaat gaattttcta agttgtggct caacacaaag
     2041 tataaaaggc ttgatacgcc catttgctac tgcggcaact tcagctctta aagtgtctac
     2101 caaagttcct gtttgcgcta cacttaaagg tagatggtag ctaccatctc taaattgcac
     2161 attttccatt aaaactgcag aactagcaga gtctaaaatg aaaatatcta aatttccttt
     2221 atcgtcaaga tacatattag taatcattct agccaaagac gcccttacat gctctataat
     2281 catatcaaag cttttgctta cttcagcaat atcgcttatg gattctaaaa tagtcagcat
     2341 gtctttaata ggtatattgt gcttgagtaa atctttaaga attttttgaa taagactcac
     2401 aggagctaca cctaaagcac cctctactat gattggataa tcatttttaa ccttatcaag
     2461 aagattttgc acctcttggc gtgtaagaag ttcgcttgca tgtgctttga taagctcgct
     2521 catatgcgtt gagatcacac ttgctggatc tataacgata tagccattta aagttgcttc
     2581 atcttttaaa tttgcatcta tccaaagtgc atcagagtta aaagcaggtt cttttgtagc
     2641 aatcccttca atctcttctg tgataaagcc actatccata gccaaatatt tatcaggata
     2701 aatttcagca cttgctatag atacgccctt tagtttaaag ctgtattcat tgggcttaag
     2761 tcgtaaatta tctcgaattc taatttttgg cattaaaaag cccaagcttt cggcaatact
     2821 tcttctcatg gagcgaattc tttcggttaa ttcgctttcg gcaagtttta tcaaaccata
     2881 acctagctca agctctaaaa tttcaacctt gagtatatcg tttattttat gctcttcttc
     2941 ttttaaaatt tcttcttcgc tttttttagc aggagcagta actccgccag ccccacccgc
     3001 tccacttgca gcattggccg cacttgcttt tgctttttta ggtgcattaa cttcgatttt
     3061 accctctttt acctgtttgg ttagataacc aagtcctaaa aataccaaag ccataaaacc
     3121 tagtgataaa tgtggcaaac ctggaacaag agcaaagata aaaaggacaa aacctacgat
     3181 taaaagcgtt cggtattcgc ttaaaagctg tgtcaatgtc ccttcggcaa aattttcctc
     3241 atccttactt gcgcgggtaa tgataatagc tgttgctgta gaagtgataa gtcctggaat
     3301 ttgtgataca agaccatcgc ctatggtaag tatagtatag gtggaagctg catcagataa
     3361 ggccatatcg tgctgaaaag cacctattaa aaagccgcct ataatattta taatggttat
     3421 aataatacct gcaaccgcat cccctttgat aaatttagaa gaaccatcca ttgcaccata
     3481 gaaattggct tcagcgataa tttcttgacg cctcgctctt gcagtttgct catcaataag
     3541 tcctgcattt aaatccgcat cgatagccat ttgttttcct ggcatcgcat caagggtaaa
     3601 tcttgcttgt acttcagaga cccttgtact acctttggtt acaaccataa agttgatcaa
     3661 aaccaaaata caaaatacaa tcaccccaat gaccatattt ccacccacaa caaattctcc
     3721 aaaggctgcg atgatctcac tcactgctgc tggaccattc tgcccttcgc ttagaatcat
     3781 tcttgtagtg gctatattta aagaaagtct aaaaagcgta atgatgagga taagagttgg
     3841 aaaagtggtt aaatccgttg gtttagggat ataaatagaa attaaaataa taagcactga
     3901 caaagcaata cttaaagcta aaaaaaagtc caaaatagga cttggcaaag gaacgataat
     3961 aatagctaaa atacatacta taaatccaac tatagtaagg cttttagccc ttaatacagg
     4021 accaattaaa ggccccaaaa aaggaaaaac aagatcgact aatttatttt ttgccattat
     4081 gattcataat atccgctagg gtaagggagt ctaaaaattc atctactttg ttttgtaaat
     4141 ttacaagcat tggcataaga gtacaatttt cttctttgtt attagggcat actccaccac
     4201 tgcattcaaa aacacttact tctttctttt ctgcactatt gacaatttct tttatgctgt
     4261 attgacttgg ctctttaata agagcaaaac cacctttagc gcctttgaag gattttaata
     4321 aattgtcttt agctagagtt tgtaaaattt tcgctaaaaa acttttagga atattaagtt
     4381 ctaatgctaa agaatcaaca tcttgaggat tttctttatg agcgatataa atcaaagaaa
     4441 gtaaagcata ctcgctagct ttggtaaata gcacggattt ctccttttat ttaataaaaa
     4501 aatagtttta attataataa aaaaacctta gaaaatggct taaaaaatga tgattgaaat
     4561 aaaaatataa aattcagctt attttttgtt ttatttgata taatcttagc ttttaaaatc
     4621 accaatcagg aggtctatca tggctttgga ttcggctaaa aaagcagaaa ttgttgcgaa
     4681 attcgctaga aaagcgggcg atactggctc gacagaagtt caagtagcac ttttaagtgc
     4741 aagaattgca gaacttacag aacatttaaa aatctacaaa aaagattttt cttcaagatt
     4801 aggactttta aaacttgtag gtcaaagaaa aagactttta gcttatctaa aaagaaaaga
     4861 ttacaattct tatagtaaat taattacaga attaaatctc agagataaat aaaatttcac
     4921 aagccctttt tttcagggct tgatcttcaa atcattcttt aatcttttaa attaccaaag
     4981 atttataaaa tttctctttg tcctttagag tttggttcgc tgagcactcc gctttctgta
     5041 agctgatcaa taatattggc tgcgcggttg tatccgatat taagctttct ttgcagataa
     5101 gaaatacttg tttttccatc gcttagtata acgcgtttgg catcttcata aagttcatca
     5161 tattcgccat tattcatact ttcactactt gttacgccca tactttgttg atcttttaaa
     5221 aagctttcat cgtattctac gctttgttga tcttttaaaa agtctacgat tttttctatc
     5281 tcaaattcgc ttgcaaatgg agcatgtaaa cgaacgatag agcttgttcc aggaggagta
     5341 aacaaacaat cccctctacc taacaaactt tcagccccca tagcatctaa gataacttta
     5401 gagtcaattt tttgccctac tttataagaa attctacttg gtaaattggc cttgataagc
     5461 cctgttacaa catctaccga tgggcgttgt gtcgcaacga tcaaatgaat tccacttgct
     5521 cttgccattt gcgctaaacg acctatataa aattccacat ccttacctgc agtcatcatc
     5581 aaatcagcca gttcatcgat aatcacaaca ataaaaggaa gttcttcttc ccctagctct
     5641 ttcatctttt cattataatt ttctatgttt ttagtttttg cttcagccat taaacgatag
     5701 cgtctttcca tttctgcaac catatttgaa agagcattaa ctgctttttt tggatcggtg
     5761 attactggtg ttaaaagatg agggatgtca ttataaatac taaattcaag catttttgga
     5821 tctatcatca ttaagcgtag agtttttgga gagttgcgat ataaaaggct taaaagcata
     5881 gaatttatac ccacgctctt tccacttcct gtggttcctg caatgagtaa atgtggaagt
     5941 ttcttaagat cagttacaaa agcatttcct actatatctt tacccaaagc tatggttaaa
     6001 ggactttttg cgtttttaaa gacttcgctt tctaaaattt ctcttaaata aatagtttga
     6061 atttcatcat ttggcacttc tatacccact acatcttttc caggaatagg cgcttggata
     6121 cggattgact ttgccattaa agccatggtt aaatcatctt gcaaatttaa aatacgactg
     6181 actttcacat ctgcactcgg acgaaattca aaagtagtta caacaggtcc tatgtaagtg
     6241 ctgataacat cgccccctat tttaaaacga cgcaattttt caagtagatt atagattttt
     6301 ttatcaattt cactttcatt aatctcttgc ttgttgtgac tagggtttgt tagaaactca
     6361 agcggtggaa gctcaaaatc tttaggtttt tccatttcgc cctgctctat ttccctaagt
     6421 aaagctttgt taagctcgat ttctttagct aaaattgctt tttgcctagt gatttcttgg
     6481 cttggttctt gtgaaatttg ctccttgcta aagctattgt cttgctctgt gatttcatct
     6541 ttctcttgaa ttgggatttg tttatttatt tgattattta aaggctctag ctcttcaatt
     6601 tttacaatag gagtaggctc tatataagga tgttccaatt cttcaactat gggtataaaa
     6661 tcatggatgc ttttatttat actttccatt tttttgattt caatttcact ttcatcaaag
     6721 tctataattt caacctcatt tgtcttttct aagatagaag gaattggtgc attttgtgtt
     6781 tttatttctt cttttgcgct tgatacttct tgcaaaggtg taccaaaatt gtatttactt
     6841 ccttgtatga tatgatttaa attgggctct aaactatcct ttttttctaa ttctttaatt
     6901 tcttcttgaa ctttattttc taaaatttca ttttgataag ctttgtattc ttgttctaat
     6961 tttgcctctt tcattaaatt ttctctaagc tctaattctt tagtaaaaat ttttggtttt
     7021 atttcttgct taggtataga aatttcaata ttttttcttt tatagcttgg ctcatctaaa
     7081 tttttattgc ttgtgtcaat ttgtttaata tcctcaagct ttttaggttt taaaaatcgt
     7141 tctgggatca tatctacctc ttcttctgaa ataaaattaa aatcttcatc aagttttata
     7201 ctcattctac tcgctttttg ggcaaaattt cttacttgtt gcgagttttc ataaatgaaa
     7261 cttttagctt cttttatgct ttctttatct atctctactt tttcgtctaa aatttggttt
     7321 ttgagttttt caaagttctc ttttgcggtg attatggaat ttttgcttgc gtttatattg
     7381 ctatatttaa caagctcttc tgttggattt aagtttaaat tttcgttctc atgttgaatt
     7441 ttttcttgaa cgaaagctgt attcttttct aaagtaacaa taggtgcttt aggctctatc
     7501 ttgcttaaat catctttttc attttctcca ccaaaaactc tcattaataa tacttttaaa
     7561 gcattttcta ttttgagtaa aatattaaaa ttgatttcaa ttttaaaaag ctcttttgta
     7621 gtttttggaa acaataaaat aaaagaaaaa aacaaaagta aaagagcgaa aattccgctc
     7681 ccagtatgcc ccaaaatagt agaaaaaatc gcataagcaa gctctagtat atagcctgaa
     7741 ttaggataaa aaactgcaaa taaaagcaaa ctcgagaaaa aggcaaatcc tataccaaaa
     7801 agctctcttc ttgtaaaatt agctaatttg taatttcttt tataataaac ataatttaaa
     7861 ataaataaga aaaaaggata ataatacgca aattctccaa acaaaaacaa atttgcctta
     7921 taaagccaaa ctcccatatc tggagctagc atacaaagac acagataaaa gataccaaaa
     7981 gtagaacttg taaagatggc ttcttttttg atgatttttc cttgaaaata attttttaag
     8041 aagccattat agcatagttt ttttacatat aatttaataa gctaagttgc gctatcgtcg
     8101 tgctagcttt taaagaagct tgataagcaa gctgtgtttg cattaaattc atcatcgcct
     8161 caccataatc aacatcaatc acatttgatt ttatactttg gacattaacg cttaaaaagg
     8221 atgtgcgtgt attaacacct tcgatagtat tatgatatgc tcccatagtt gtattaagct
     8281 tgctaacatg atctgctaaa tgatcaagtc tttctaaagc tccttgcata cctgtatttc
     8341 tagggttttc actttcggag tctgctctca tattgccttt taaaacagca tcaatcattg
     8401 aatctaaatc tttaataata tccacatttg gttcatctat agttaaagaa ttattcgcgc
     8461 taaaactaaa atttggacca ttttgtacag tagaagttgt ggtaaaagga ggtgctggaa
     8521 attggccact ttgagaatca ctaagagaaa tttctatatt ggttcctgat gaaagtttat
     8581 cagtaacact aatacgacct ttataatcca tacttacatc aacagtagct tgtgaatctt
     8641 tcatgagttg ttgtatttgg gtataatctg cattattaat ttgaccatta ttggcttgta
     8701 tggttgttgt aggaatttta tctgcagcaa acatacctat aatatcatta atttgaccat
     8761 aagtaatatc atttgatcct gtaacaaccc cactatttcc agttgcagga ttagtatgca
     8821 taataggaaa gcttatggtt tgacctggat tattaggatc aggatagctt acagttgaag
     8881 tttgtaaatt tatagcaaca tcgtaagaat ttccaccttt ggaattgact tttaaattta
     8941 aagtagtacc atttaggcta tctcctgcca ttacctcgct aagtttggtt gaatcagtgg
     9001 cataagcatt gcttcctttg ataacttgag aaacattacc ataaacagta ttgccatttt
     9061 tttcaaaata cacattatcg taatcagctc cattagcagc atttccatct gtatctgtca
     9121 ttttactttt gataaaatca gtttgtttta aatcaattgt gaattgttga ttgttgattg
     9181 ttacagttac agggttgttt aattttgtta tatctccatt actaggagca gccgtagcag
     9241 cttgcataac cctatttgta acttcattca ttgaaatacc ctcttgatta gcagcttcaa
     9301 taatattttt aagttcatct ttggtatcag cttgtggtgt gaaagctaca gcatgaaaat
     9361 cgagtttatt attaccttgc tttagatctg taatttgaat ttgaccacta tcattcatac
     9421 ttacttctac tactttatta tttggagtat taccataaag agttccaata ttttccatta
     9481 catcttctaa agtatcttcg ggtttgacga gtacagcact tttaaaactt gttccatcgg
     9541 gtcttgtacc ttgaacataa agagttgttg gaggaaaatc tagcttgcta tcatcatact
     9601 caaaatcttt gtcagcatct aagctattat cttttacata accttgtccg ataagttgtt
     9661 gccatttaga atctcctgtg agatatttag ttttatcagg gtctttattt aaatcccaac
     9721 gattatctgc aaaactaaca ttagtgctta tttgtttttt atagtctcca tctgctttaa
     9781 aaaataaatc ccaacctggt atattgtatg ggctttcagt tccagctcca gttactacat
     9841 taatattatt tttatctcca taataatttc cattagaatc aaatggttta ttggctactt
     9901 gtgaacccgc aaaaagatac tgaccattaa cactggtatt tgcaagctga actatgcttt
     9961 ctttaatgcg ttctagttct tttgctatag cttctcttga ggtttgagaa ttgctatcgc
    10021 ttgcagcttg ggttacttta actttaaaat cttcaagaag tttaaccata tcttgtaaag
    10081 ctttcatact attttgagtc atttctttag ctgagtttgt agcttgttta acttgctcta
    10141 aagttttgag ttcatattca aggcgagtat tatctatata aacacttgca tcttcataag
    10201 aattttggat tttaatccct gatgaaagtt gctgcgaaat ctgatacaaa gagctttgag
    10261 cgcccataga agtgcttata gaatttgtaa agttgagttt atttgtaatt ctcatattca
    10321 tccttggagt tttgatttaa ataaatcttt tcaaacattg ctttgtaaat acaagcaata
    10381 attgttccaa ttttattttt acaatatcgg catcaataaa aatttaataa tattttatcc
    10441 ttaaaaaatt ttgatatttt tcatacaaaa ctccatttaa gcaaataaaa aataaatttt
    10501 aaaatatttt atatattttt aaagtctttt ttagtctaaa atagatataa ttacaccttt
    10561 acaaagcctg agtggtgaaa ctggtagacg cgccagactc aaaatctggt aagggcaacc
    10621 ttgtgtcggt tcgagtccga cctcaggcac cattccactt gaatttaact aacttcaaag
    10681 attttattat aaaaatattt atcatttgta tttttattgt ttccatttgt tttgaaaaat
    10741 tcatttaata ttagtttttc ccagttaaag catttattat aatatatgaa gaatattttt
    10801 atgcaagcaa atatgcttta aattatgtta aacatttaat tataaattat ttaaaaacaa
    10861 taagctcact ctcttaaaat aagataaaaa taaccctata ttcttaaata agattaaaaa
    10921 tatatgatta aacttaaatt aaactaaaat ttgatatagt tcgcgcaata gagaaagttt
    10981 aaataaaaaa ttaaaaagtc atatttattt aaactgaaat atttgtatta
//
LOCUS       DAQUWA010000056        10792 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.056, whole genome shotgun sequence.
ACCESSION   DAQUWA010000056 DAQUWA010000000
VERSION     DAQUWA010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10792
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.056"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..300)
                     /locus_tag="R8X70_001375"
     CDS             complement(<1..300)
                     /locus_tag="R8X70_001375"
                     /inference="COORDINATES: protein motif:HMM:NF019313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929139.1"
                     /translation="MENNQNKQEKLESVNIDKPIEKKEEDLFSRNSVAEQLNTIIKNY
                     KEEDSITFGIIGDWGSGKTSFVNMTLEDFKDDENFIIVKFNPWNISTRKKLISDFF"
     gene            complement(829..2559)
                     /locus_tag="R8X70_001376"
     CDS             complement(829..2559)
                     /locus_tag="R8X70_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929140.1"
                     /translation="MLIDEKRLMRNYILKPAYPSNIGELDTQEVYKQWFTYAMIGVNK
                     YVELLHKQLIRKGRSYSQNATHPLYPNSYIVKKYNIKSASTAPYDKHSHGNLGLNQFF
                     VGQDPYKPYKGDPSSKNGIYHDICEIRTKYNLGNMQYYYGFPNNLTLLFEKEKAWKYN
                     GKRFFYIDEKINFKDILNKALENINYEMLINDIEVVIFCQTIQKNNEWIYPSIDDIKI
                     PNIKVENIEFKPLFGKPYKKLCIDVEKFYNDFKELNKNIFRIEKVEIAYNVYEKAQKT
                     RESDPSKIYYTLTSKKVSFFEVFNSIKENYKCKYATPLCFYNSFNFVCYEEPYVAFSS
                     LNNARWGKKDTSVTPSIYPLYRKSSNLPYGRRDRWFALWDSFYYLYVYEKSSKGFLSF
                     LAPIVTIVLAVATWWIGGQGAWLGTLIGVSETIASGITLGISLGLAIGSLTGNKTFSI
                     LNAVWGLVNFLGAWGANNWNLAADFTKNTAQIAQEMTTFESTLNIAGNLLSGASKIFD
                     VVQSITANTPDMINEQKGSDLDNNEGGNGSEALELAKDMINPTIWYNFETTDILNEKI
                     EKNRNLIFAF"
     gene            complement(2562..3188)
                     /locus_tag="R8X70_001377"
     CDS             complement(2562..3188)
                     /locus_tag="R8X70_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929141.1"
                     /translation="MSNTNVDYNKRLEVFKEIYPQILEMSLAEKSPFGEFKKLLEQFG
                     NDNIIRNDTQFQSLAQALVSVGQTIVAQSQNTALQMILGGDENIVNQANINLTNARIE
                     TEKANANLVKRQTAQIDDELELKEQSVNIDKSLSIEKEKLLQAQTETEKAKPALIARQ
                     TAQIDDNLRIEAAKVTQSVQFGYCTGGLDIPQEIMKLVKEKIENIEKF"
     gene            complement(3181..3378)
                     /locus_tag="R8X70_001378"
     CDS             complement(3181..3378)
                     /locus_tag="R8X70_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929142.1"
                     /translation="MQTGQVVTKIEIQKVRIPQELLTLSPLEKPKAKNELDILNAYSM
                     LFYKYKQCEIQISKIKELNNE"
     gene            complement(3332..3715)
                     /locus_tag="R8X70_001379"
     CDS             complement(3332..3715)
                     /locus_tag="R8X70_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929143.1"
                     /translation="MINLLFGNAKLYIALVSMAILAGYFYLRLDSTKAKLEKSQSDLA
                     LALEINRNNEAKLKELTQIHKAELKAINEANNQKNEVQKKVQYVKEYIYKSNENNITK
                     LFNDVVDRLWDANRASSNQNRNSKS"
     gene            complement(3947..4408)
                     /locus_tag="R8X70_001380"
     CDS             complement(3947..4408)
                     /locus_tag="R8X70_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929144.1"
                     /translation="MKIKIIRRYTGKTCVIGKFKVLDDEEKILFECFALEEDKEGLES
                     GKDLRIPEGNYNLRRHTPSRFENTLRSITKKDDDTMINVYNDEVPASRAILIHWGNTD
                     KDTQGCILLGLTKDNNNESVGQSRQACKEFYDFMYGKNLEDIKLEITNELA"
     gene            complement(4398..4871)
                     /locus_tag="R8X70_001381"
     CDS             complement(4398..4871)
                     /locus_tag="R8X70_001381"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929145.1"
                     /translation="MKIAFYKVKENDKSTFLDKAIAFFTSSWKERLNGDFLKSYSHCE
                     IILDNLMISSSPRDKGVRIKEFKDSGRWDFIEINDINETKIKEFLYSQIGKKYDFLGI
                     LGFFTFTKDSEDKWFCSEIIIRALQIGGLVKLGDMNAGSSSPNRLYKKLKDTNEN"
     gene            complement(4868..5248)
                     /locus_tag="R8X70_001382"
     CDS             complement(4868..5248)
                     /locus_tag="R8X70_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929146.1"
                     /translation="MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEA
                     GEKTKELISETKNTNVLIREQIAISKASNDSLIKFIQTHCSKTNDKLEAIETDLMRMD
                     ERLVKLTQIRNDDLRMIYKRKENE"
     gene            complement(5245..5880)
                     /locus_tag="R8X70_001383"
     CDS             complement(5245..5880)
                     /locus_tag="R8X70_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HEF2929147.1"
                     /translation="MFYDLKNKSLKYDDVFLKDVKIQNEEGEIDAQDTYFLSACDDGL
                     LKELGFAKVKEEEAPSFNEKTQKLNQVQNYDEKSNLYIISYEIKEKTLEELKELKLEE
                     LKAIKEEKLLFMPFKNTTFQIDTEAKINISGKVSEIMLANLNNTPLENISWIDKDNRI
                     ITFSKDEFLEFGVNIAKYTESIIFKNDELRNKVKNATSLEELNLIAWESEK"
     gene            complement(5893..6342)
                     /locus_tag="R8X70_001384"
     CDS             complement(5893..6342)
                     /locus_tag="R8X70_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929148.1"
                     /translation="MNCLLLSNNGIALNLPPSLGGSVTNYNYMLKLDMIYKQAVVLPS
                     NINNKEVVMLGEVWTTGNMSNKTSANTLHITWNNFNSSVELHALSKYYTANAKIKVEK
                     RFNFGNINNLQIMLSSYQSGSSKSRAGWNLNDGNRLNPRANLTLYWN"
     gene            complement(6344..7516)
                     /locus_tag="R8X70_001385"
     CDS             complement(6344..7516)
                     /locus_tag="R8X70_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929149.1"
                     /translation="MADLEQVVNDLNLASQSLQELREKYDGALDLLDNKNTQITGAID
                     SAKSNALQEIQTISDTATNQISQLKNTSLNLVNEAKNTATTEISNKKEEHKQELETKK
                     NEYINKIVAKANEYDIANINAQVQAKVTKTGDETIAGVKTFSVPPVSATNPTANNQVA
                     NKSYVDTVVNTVGNSKVALSGNQTIAGVKTFSSSIVIPNATANNHATNLGQLNSKVAL
                     SGNQTIAGVKTFSVPPVSATNPTANNQVANKSYVDTVGNSKVALSGNQTIAGVKTFSV
                     PPVCSANPTQDAQLARKWYVDYGGGIKNLGNQTAPKIDLRQAQHFILTMTARGAIGIA
                     NWGGAGKSGTITVNNAQNITAFSAPFKFRVAQSGFSGTETFAYFCIASNNVRLVRT"
     gene            complement(7520..9181)
                     /locus_tag="R8X70_001386"
     CDS             complement(7520..9181)
                     /locus_tag="R8X70_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929150.1"
                     /translation="MGTSLNELKTGREKLEIINQVLARISNVATALDNTRIEEIVGLK
                     EQVNNFYNQILNLKNLVVKNSELTQSNTDFTKNKRNEIEKISNEIKNTLNNIEEIYNN
                     IIKSEKDISNGVNFVKDKYPELNEFNKNFEIIKIKLEEYYNIAVDFNAGLKKIEENKN
                     LTKSYLDLSIELKQQILQELEHAQSIKEDLHSNIELVNKLVSNIVATKNEIISITNNF
                     KNVKSEVQNIVNDAEATIKLKINTILFENQRLNQNMINLLKRCEKLEDEIVGKYEDIL
                     KIEDLINSSTEIINDLREAVKQSEQISEDMRSFTAIINDFKTEISNLKADLESYGERL
                     KGQLDLKLAQANSSVDAKISSIETLKNQIEAYVEANKNTVHTALANFIERSKIANEDL
                     GRLAEVARTELANDKTAIESYLLELKQSMVNAMKKVSSDITDETSGILAQKNQIELII
                     TQGKSDLDTLINNFNSNYQNKLNEFNSNTNEKLASINSLSEESITNIQNKTDENISRL
                     DTASEEKLAKIDEIIKDNLGGIYSHIFSIENVLFDKKIIKLSYKE"
     gene            complement(9184..9378)
                     /locus_tag="R8X70_001387"
     CDS             complement(9184..9378)
                     /locus_tag="R8X70_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929151.1"
                     /translation="MKEHGCECNFTNKFNRALSYKDYAQSINSADFIAYLDDKKWLLA
                     MDDLLFFCEKRIKDSDYYEG"
     gene            complement(9359..9763)
                     /locus_tag="R8X70_001388"
     CDS             complement(9359..9763)
                     /locus_tag="R8X70_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002796938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929152.1"
                     /translation="MLCIMAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVP
                     SVLLKNVEQCEKVFRQVRNNHFLIIPDEPDFDNEKEHLMIDEALSFAVINYVCYLITR
                     CEEKDFLALCDKIINEYIANDGKELDDERTWL"
     gene            complement(9763..>10792)
                     /locus_tag="R8X70_001389"
     CDS             complement(9763..>10792)
                     /locus_tag="R8X70_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5309 family protein"
                     /protein_id="HEF2929153.1"
                     /translation="LPSMGHTAPATENVKLKQSIYETIIKIGATETPILNKIGTSKVT
                     NPLTHSWLTDTFEEPKKNANLELSKFVGETKNTAQKTTNATQIFITEAMVSKALLKAN
                     QYGGNEMEYQIGKKTKEHKMDMEYALFGLGRDSDVKKSVFKDYVQAQEATSGEMAGLF
                     HYIAKGKDSFADGKRGNVLAFDETGDWSGTATELTEDKLNQILQTIWNSGVTPKDVFL
                     GADLKGAINKFATRILGNETKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGD
                     FEYMKHGLYIPTMIEDVPTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKAKA
                     VLKAARGA"
BASE COUNT         3131 a         1806 c         1360 g         4495 t
ORIGIN      
        1 aaaaaaatcg ctgataagtt tttttctagt agagatattc caaggattaa atttcactat
       61 aatgaaattt tcatcatctt taaaatcctc caaagtcata ttaacgaaag aggtctttcc
      121 actaccccaa tcacctataa ttccaaaagt aatactatct tcttctttat aatttttaat
      181 aattgtattt agttgttctg ctactgaatt tctactgaac aaatcctcct cttttttctc
      241 tataggtttg tctatattaa cgctttctaa tttttcttgt ttgttttgat tattttccat
      301 aaaataagct ccttttggtt tttgagatta tatataattt taactatgtt ttatgataaa
      361 aagaaccaaa ggtattctaa tcactcttga gagggtaaaa aatatttttg gttttttgct
      421 ttaaataagg aaagataaaa agctatctat aattttttaa gatctattgt ttaggttttt
      481 actaaaatca tctagagata gttggatgtt ttttgaaaaa tatcatttgt aatttaaaat
      541 aggttctttg tatcgatttt tcctaacttt ttggaataaa aaataaaaag ttaggagaaa
      601 agttaggaaa aaagtttcaa aatggatttt aatggaaaaa actttaattt aggctttata
      661 tagctacaaa tgcctatttt atctatattt tataagtctg atatttatag tagcttatgg
      721 tacaaatggt gcggttagcg agatttgaac aatatagaga tattgcctat atttacatat
      781 aattatttta tatattttta caaagtcaat atataggtca ataacttttt agaatgcaaa
      841 aataagattt ctattttttt ctattttttc gtttagtata tctgtggttt caaaattata
      901 ccatattgta ggattaatca tatcttttgc taattccaaa gcttcgctcc catttccgcc
      961 ttcattgttg tctaaatcgc tacctttttg ctcatttatc atatcagggg tattagctgt
     1021 aatgctttgt accacatcaa aaatcttact agctccgctt aataaattac ccgcaatatt
     1081 taaagttgat tcaaaagttg tcatctcttg tgcgatttgt gctgtatttt ttgtaaaatc
     1141 agcggctaaa ttccaattat tagcacccca agcacctaaa aaattaacaa gaccccaaac
     1201 agcattaaga atggagaatg ttttatttcc agttagagaa cctatggcta aacctaagct
     1261 aatccctagt gtgattcctg aagcaatggt ttcgctcact cctattaaag taccaagcca
     1321 tgcaccttgc ccgccaatcc accaagtagc tacagctaaa acgatagtga caataggtgc
     1381 taaaaagctt aaaaatcctt tgcttgattt ttcgtataca taaagataat aaaaactatc
     1441 ccataatgca aaccatctat ctctgcgccc ataaggcaaa tttgaacttt ttctatatag
     1501 cggatatata cttggcgtaa cactcgtatc ttttttaccc catcttgcat tatttagaga
     1561 agaaaatgct acataaggct cttcataaca aacaaaatta aaactattgt aaaaacataa
     1621 aggagttgca tatttgcatt tataattttc ttttattgag ttaaatactt caaaaaaaga
     1681 tacttttttg cttgttaaag tataatatat tttactcgga tcactctctc tagttttttg
     1741 tgctttctca tatacattat aggctatttc tactttttcg attctaaata tatttttatt
     1801 taattcttta aaatcattat aaaatttttc aacatcaatg cataattttt tataaggttt
     1861 tccaaataat ggtttaaatt caatattttc cactttaatg tttggtattt taatatcatc
     1921 aatactagga tatatccatt cattattttt ttggatggtt tggcaaaaaa taactacttc
     1981 tatatcattt ataagcattt cataatttat attttccaat gctttattga gtatatcttt
     2041 gaaatttatt ttttcatcga tataaaaaaa tctttttcca ttatatttcc aagctttttc
     2101 tttttcaaat aaaagagtta aattgtttgg aaaaccataa taatattgca tatttcctaa
     2161 attatattta gttcttatct cgcaaatatc atgatatatt ccatttttac tgctaggatc
     2221 tcctttatag ggtttgtacg gatcttgacc cacgaaaaat tgatttaagc ccaaattgcc
     2281 gtgactatgt ttatcataag gggctgttga tgcacttttt atgttatatt tttttacaat
     2341 ataggagttt gggtaaagag gatgtgttgc gttttggcta taactcctac cttttcttat
     2401 gagttgttta tgtaaaagtt caacatattt atttacgcct atcatggcat aggtaaacca
     2461 ttgtttatat acttcttgtg tatccaattc tcctatgttt gatggataag caggcttaag
     2521 aatataattt ctcataagcc ttttttcatc tattagcatt attaaaattt ttctatattt
     2581 tctatttttt ctttaacaag tttcataatt tcttgtggta tatcaagccc accggtacaa
     2641 tatccaaatt gaacactttg tgtaaccttt gcagcttcta ttcttaagtt atcatctatt
     2701 tgagcagttt gtctagctat taatgcgggc tttgcctttt ctgtttctgt ttgcgcttgc
     2761 aatagttttt ctttttctat acttaagctt ttatctatat tgacactttg ctcttttagc
     2821 tctaattcat catctatttg agcagtttgt cttttgacta aatttgcatt tgccttttct
     2881 gtttctattc gtgcatttgt tagatttata ttggcttgat ttactatatt ttcatctcca
     2941 cctaaaatca tttgcaaggc agtgttttga ctttgtgcta ctatggtttg tccaacactt
     3001 actagagctt gtgctaagct ctggaattgt gtatcgtttc taattatatt atcatttcca
     3061 aattgttcta aaagtttttt aaattctcca aatggggatt tttctgctaa actcatttct
     3121 aaaatttgcg gataaatttc tttaaaaact tcaagtcttt tattgtaatc aacatttgta
     3181 ttactcatta tttagctcct ttattttgct tatctgaatt tcacactgtt tgtatttgta
     3241 aaaaagcata gaataagcat ttaaaatatc tagttcattt tttgcctttg gcttttcaag
     3301 gggacttaat gttaataact cttgcggaat tctaactttt tgaatttcta ttttggttac
     3361 tacttgccct gtttgcatcc cacaacctat caacgacatc gttaaaaagc ttggtaatat
     3421 tattttcatt gcttttataa atgtattctt taacatattg cacctttttt tgaacttcat
     3481 ttttttgatt atttgcttca ttgattgctt ttagctccgc tttgtgaatt tgcgtgagtt
     3541 cttttagctt tgcttcattg tttctgttaa tctccaaagc caaagctaaa tcactttgac
     3601 ttttttctaa tttggccttt gtgctatcaa gtcttagata aaaatatcct gctaagattg
     3661 ccattgatac taaagcgata taaagctttg catttccaaa taaaagattt atcatatttt
     3721 gttttagaag tttaagtaag gtttttgtat aataccccta agggttagcc gtaggtctag
     3781 ccccctatgg ctaaatttta cccttgaaag tgggtgattt tatgattaca tatcaccaaa
     3841 taatcgttat aattatactc ttatgtataa ttattgtcaa ggcttattag tcttgtcccc
     3901 tttttagggg attatttggt aacctactta aacttttatc tcctttctat gctaattcat
     3961 ttgttatttc taatttaatg tcttcaagat ttttaccata catgaaatca taaaattctt
     4021 tacaagcttg tctgctttga ccgacacttt cattattatt atctttagta agccccagca
     4081 agatacaacc ttgtgtgtct ttgtcagtgt ttccccagtg tattaaaatt gcacgacttg
     4141 ctggaacttc atcattataa acatttatca ttgtatcatc atcttttttt gtgatacttc
     4201 ttaaagtgtt ttcaaatctt gaaggtgtgt gtcttcttaa attataattt ccctcaggta
     4261 ttcttaaatc tttaccgctt tctaaacctt ctttgtcttc ttccaatgca aagcattcaa
     4321 aaagaatttt ttcttcatca tctaaaacct taaatttacc tataacgcaa gttttacctg
     4381 tgtatcttct aatgatttta attttcattt gtatccttta gttttttata taatctatta
     4441 ggacttgaac ttcctgcatt catatctcct agcttaacca aaccacctat ttgcaacgct
     4501 cttattatga tttcagaaca aaaccatttg tcttcactat cttttgtgaa tgtgaaaaag
     4561 cccaaaattc ctaaaaaatc atattttttt cctatttgag agtaaagaaa ttcttttatt
     4621 tttgtctcat ttatatcatt gatttctata aaatcccatc tgccactgtc tttaaattct
     4681 tttattctta ctcctttatc tctaggactt gagctaatca ttaaattgtc taagattatt
     4741 tcacagtgag aataggattt taaaaaatct ccatttaatc tttctttcca agatgaagta
     4801 aaaaaagcta ttgctttatc aagaaaagta gatttgtcat tttctttaac tttataaaat
     4861 gcaattttca ttcgttttcc tttcttttat aaatcattct taaatcatca tttcttattt
     4921 gagtaagctt aacaagcctt tcatccattc gcataagatc tgtttctata gcttctagct
     4981 tatcgttagt tttagagcaa tgcgtttgta taaatttgat taagctatca ttgcttgctt
     5041 tagatattgc aatttgttct ctaataagaa cattagtatt tttggtttca cttataagtt
     5101 cttttgtttt ttccccagct tctttatgta aagttttata taaatgccat gcaatcccag
     5161 ctaagacaaa aaccatcaat cctaataatg cagatccgct taaagaaccg agtatagcac
     5221 cttcttttat tatattttca gtactcattt ttcactctcc catgcaatta aatttaattc
     5281 ttctaaagat gtggcatttt tcactttatt tcttagttca tcatttttaa aaataatact
     5341 ttcagtatat ttagcgatat taaccccaaa ttctaaaaac tcatctttac taaatgtgat
     5401 gattctgtta tctttgtcaa tccaagaaat attttccaaa ggagtattat tgagatttgc
     5461 taacattatc tcgctaactt ttccgctgat attaattttt gcttccgtgt caatttgaaa
     5521 tgtagtattt ttaaaaggca taaataaaag cttttcttct tttattgctt ttaactcttc
     5581 taattttaat tcttttaact cttctaaggt tttttcttta atctcgtaag aaataatata
     5641 aagattactt ttttcatcgt aattttgaac ttggttaagc ttctgtgttt tttcattaaa
     5701 gcttggcgct tcttcttctt taactttagc aaaaccgagc tcttttaaaa gcccatcatc
     5761 gcaagcactt aagaaataag tatcttgtgc atcaatttca ccttcttcgt tttgtatttt
     5821 tacatctttt aaaaaaacat catcatattt taaactttta ttttttaaat cataaaacat
     5881 atttaccctt tcttaattcc agtataatgt taaatttgct cttgggttta atctattccc
     5941 atcatttaag ttccaaccag cacgtgattt tgaactacca ctttgataag aacttagcat
     6001 tatttgtaag ttgtttatat ttccaaaatt gaatcttttc tctactttga tttttgcatt
     6061 ggcagtgtaa tatttactta aagcatgcaa ttctacacta gagttaaaat tgttccatgt
     6121 gatatgcaaa gtatttgcag aagttttatt agacatattt ccagtcgtcc aaacttcgcc
     6181 taacataacc acttctttat tattaatatt tgatggcaat accactgctt gtttataaat
     6241 catgtctagc tttaacatat aattataatt tgtaaccgag cctcctaaag atggaggtaa
     6301 atttagtgct atgccattat tagaaagaag gaggcagttc attttaagtc cttactaatc
     6361 ttacattatt cgaagctatg caaaaataag caaaagtttc agtgccacta aatccacttt
     6421 gagctactct aaatttaaaa ggtgccgaaa aagcagtgat attttgagca ttattgacag
     6481 tgatagttcc acttttacct gctccacccc aatttgctat accaatagct cctctggctg
     6541 tcattgttaa gataaaatgc tgagcttgtc ttaaatctat ttttggtgct gtttgatttc
     6601 ctaagttctt aattccgccg ccataatcca cataccattt tcttgccaat tgtgcatctt
     6661 gtgtgggatt agcactacac acaggtggta ctgagaatgt ttttacgcct gctatagttt
     6721 gatttccgct taatgcaact ttgctatttc cgactgtatc tacatatgat ttgtttgcta
     6781 cttgattgtt agcagtagga ttagttgctg atacaggtgg tactgagaat gtctttacac
     6841 ctgctatagt ttgatttccg cttaatgcaa ctttgctatt taattgacct aaatttgtcg
     6901 catggttatt ggcagttgca tttggtatta ctattgaact agagaatgtt tttacacctg
     6961 ctatagtttg atttccgctt aatgcaactt tgctatttcc gactgtattt acaactgtat
     7021 ctacatatga tttgtttgct acttgattgt tagcagtagg attagttgct gatacaggtg
     7081 gtactgagaa tgtctttacg cctgctatag tttcatctcc agtttttgtt accttagctt
     7141 gaacttgcgc attaatattg gcaatatcat actcattagc ttttgcaaca attttattaa
     7201 tatattcatt cttcttagtt tctaactctt gtttatgctc ttccttttta tttgatattt
     7261 cagttgtagc tgtattttta gcttcgttga ccaaatttaa ggatgtgttt tttaactgcg
     7321 aaatttgatt tgtagctgta tcgcttatag tttgtatttc ttgcaaggca ttagattttg
     7381 cactatctat cgcacctgtt atttgtgtat ttttattatc tagtaaatcc aaagcaccat
     7441 catatttttc tcttaactct tgtaagcttt gtgatgccaa atttaaatca tttacaactt
     7501 gctctaagtc cgccattctt tactccttat aacttaattt aattattttt ttatcaaata
     7561 aaacattttc gattgaaaaa atgtgagaat aaattccacc caaattatct tttataattt
     7621 catcaatttt agctagtttt tcttcgctgg ctgtatctaa tctgcttata ttttcatctg
     7681 ttttattttg tatatttgtt atactttctt cactgagtga attaatagaa gctaatttct
     7741 cattagtatt agaattaaat tcgttaagtt tgttttgata atttgagtta aagttgttga
     7801 ttaaagtatc taaatctgat tttccttgtg ttatgataag ctctatttgg tttttttgag
     7861 ctaatattcc acttgtttca tctgtgatat cactggatac tttcttcatg gcattaacca
     7921 tactttgttt aagctctaat aaatagcttt caatagctgt tttatcatta gccagctcag
     7981 ttcttgctac ttcagccaat cttcctaaat cttcattagc tattttagat ctttctataa
     8041 agttagctaa agctgtatgt acggtatttt tattagcttc tacatatgct tcaatttgat
     8101 tttttagagt ctcaatgctt gaaatcttag catctacact tgagtttgct tgtgctaatt
     8161 ttaaatcaag ttgccctttt aatctttcgc catagctttc taaatctgct tttagattag
     8221 aaatttctgt tttgaaatcg ttgataatag ctgtaaaact tctcatatct tcgcttattt
     8281 gttcgctttg ttttactgct tctctcaaat catttataat ttctgtagat gagtttataa
     8341 gatcttctat ttttaaaata tcttcatatt ttcctactat ttcatcctct agcttctcgc
     8401 aacgctttaa taaattaatc atattttgat ttaatctttg attttcaaaa agaatagtgt
     8461 ttattttaag ttttattgtt gcttcagcat cattaactat attttgaact tctgatttta
     8521 catttttaaa attattagtt atagatataa tctcattctt tgttgccacg atatttgaaa
     8581 caagtttatt tacaagctct atattagaat gcaaatcttc tttaatactt tgtgcgtgtt
     8641 ctagttcttg taagatttgt tgcttaagtt ctatggataa atctaaatag gatttggtaa
     8701 gatttttgtt ttcctctatt tttttaagac ctgcattaaa atcaacagct atgttgtaat
     8761 attcttcaag ttttattttt ataatttcaa aatttttatt aaactcatta agttcaggat
     8821 atttgtcttt aacaaaatta actccattgc ttatatcttt ttctgatttt ataatgttgt
     8881 tgtagatttc ttctatatta tttaaagtat tttttatttc attgcttatt ttttcaattt
     8941 catttctttt gtttttagta aaatcagtat tgctttgagt aagctcgcta ttttttacaa
     9001 ctaaattttt aagatttaaa atttgattat aaaaattatt aacttgttct tttagtccta
     9061 caatttcttc tattctggta ttatccaaag cagtagcaac atttgaaatt cttgccaaaa
     9121 cttgatttat aatctcaagt ttttctctac ctgtttttaa ctcatttaag cttgttccca
     9181 tttttaacct tcataataat cactatcttt aattctcttt tcacaaaaga aaagcagatc
     9241 atccatggct aaaagccatt ttttatcatc taaataagct ataaaatcag cactatttat
     9301 actttgagca tagtctttat aactcaaagc tcgattaaat ttatttgtaa aattacactc
     9361 acaaccatgt tctttcatca tcaagctcct tgccatcatt agctatatac tcattaatta
     9421 tcttgtcaca taatgccaga aagtcttttt cttcgcatct tgtaatcaaa taacaaacat
     9481 aattaatcac agcaaaacta agtgcttcat ctatcattaa atgttctttt tcattgtcaa
     9541 aatcaggctc atcaggaata atcaaaaaat gattatttct aacttgcctg aaaacttttt
     9601 cgcattgttc tacatttttt aaaagaacac taggaacaca ttttgataaa atataataaa
     9661 atgcttccat aaaataggct ttcaaaactt catcatcttc tatcattttg taagaatttt
     9721 taactttagc gataatgagt tttttagcca taatacaaag cattatgcac ctcttgctgc
     9781 ttttaaaacc gctttagcct ttgcattatt tccactagtt aatcccacgc ctatagcaaa
     9841 agcatcagca tttcttactt ctaaagtgct ttgcgtataa aatctttttg cttttgcagt
     9901 aatatcagtt ggaacatctt caatcatagt aggaatataa agcccatgtt tcatatactc
     9961 aaaatctcca gcaattaaaa catcacccaa accatattta gggcttaata atctatgcat
    10021 atggaaattt accgttccaa aatctgtttc aaggcttact acttgtcctg ctagttttgt
    10081 ttcattgcct aaaattcttg tagcaaattt attgatagct ccttttaagt cagctcctaa
    10141 aaagacatct ttaggcgtaa ctccgctatt ccaaatggtt tgtaagattt gattaagttt
    10201 atcttctgtt agttctgttg cagttccgct ccaatctcct gtttcatcaa aagctaatac
    10261 atttccacgc tttccatcag caaagctatc ttttccttta gcgatataat gaaaaagtcc
    10321 agccatttct ccacttgttg cttcttgtgc ttgaacataa tctttaaaaa ctgatttttt
    10381 tacatcacta tctctgccta gaccaaataa agcatattcc atatccattt tatgttcttt
    10441 ggtttttttg cctatttggt actccatttc attgccacca tattgatttg cttttaataa
    10501 agcttttgat accatggctt cggtaatgaa tatttgagta gcatttgtag ttttttgagc
    10561 tgtgtttttt gtttccccta caaatttgct caattccaaa tttgcattct tttttggttc
    10621 ttcaaaagtg tctgtaagcc aactatgagt taaaggattt gtaacctttg aagtgcctat
    10681 tttatttaaa attggtgttt cagtagctcc aattttaata atcgtttcat atattgattg
    10741 ttttaactta acattttctg ttgcgggtgc tgtatgtccc attgaaggta aa
//
LOCUS       DAQUWA010000057        10723 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.057, whole genome shotgun sequence.
ACCESSION   DAQUWA010000057 DAQUWA010000000
VERSION     DAQUWA010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10723
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.057"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(13..837)
                     /gene="purU"
                     /locus_tag="R8X70_001390"
     CDS             complement(13..837)
                     /gene="purU"
                     /locus_tag="R8X70_001390"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HEF2929154.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEEMFFF
                     RAILEGEFDKKAFVGTLEAMLGEEAYIELCEKRKKDIIVFATKESHCLGDLLIKHYSN
                     ELEANIKAVISNHDTLKNLVEKFEIPYHCISAENLDRKEQENQILKCLEQYKFDYLVL
                     AKYMRILSPDFVRYFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVLPVSHEYTWQDMQQAGRNVEKNVLSKALDLVFDDRIFIHKNKTIVF"
     gene            complement(838..1953)
                     /locus_tag="R8X70_001391"
     CDS             complement(838..1953)
                     /locus_tag="R8X70_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEF2929155.1"
                     /translation="MQTSKISLKNNADLKFVIDFLSPYTQRAYLVGGSVRDLFLGLEI
                     YDYDIELYDITPSDFEKMMKKLGAQGFGKSFFVYKFKNYDFALARTENKTGYGHTGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLEQGILRHIDQTSFQEDSL
                     RILRAVAFASRFDFKIADESLKLMQSMNIKDLSRDRINAELYKFFKSSKLEVGYKYLQ
                     ELNMEKEIFGFDSAFKSMEFQDLLRKSREVVKDDALFLYLYLNFFNLNKEEFFKKSKI
                     KKEYFKKANQAFYLDEMSDFDLASIALDMPLKEWLGLWDKERIKWAKKFKLYENKFKT
                     SILAKDFLDAGIYGKMLGLKLKEARENELYEYIKRLN"
     gene            complement(1922..2419)
                     /locus_tag="R8X70_001392"
     CDS             complement(1922..2419)
                     /locus_tag="R8X70_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HEF2929156.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQSEILKEQEELRKTQIQEDMP
                     TVKLKEEPILEQELEDKISMAKFEEEQKIQEEIKNLDELNQENKEPVKEEAVLQSEIL
                     NPSIIAEVQTLNEDIFLKHLRERILVLFEGLNSVKEENLEHRLQLTINFLEFLLANIE
                     DKLKK"
     gene            complement(2416..2664)
                     /locus_tag="R8X70_001393"
     CDS             complement(2416..2664)
                     /locus_tag="R8X70_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEF2929157.1"
                     /translation="MMKNTVTEASIYEAQGLKDEALEIYKNILKEDPNNQNAIDAVRR
                     LSGFRSKHQDLNTQMLDFFINMKSDEEINEFKRWLIKI"
     gene            complement(2708..3289)
                     /locus_tag="R8X70_001394"
     CDS             complement(2708..3289)
                     /locus_tag="R8X70_001394"
                     /inference="COORDINATES: protein motif:HMM:NF013933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEF2929158.1"
                     /translation="MDYTLFILTFVSVSLLPGLCMSLAFSLGLSLGYKNTLWMIFGEL
                     VGLALVVLCCALGIEFILRYENLFKFFQIAGALYLLYIAFILFKSKSQITQEKIIHKK
                     KFSLIIQGFIASSSNPKAWIFMFFILPSFLKFQVNVNILLLIILLIEFCSLSLYALGG
                     SIFKIFMNKHLDKINKISALFIFAMALSVLYKV"
     gene            complement(3289..3609)
                     /locus_tag="R8X70_001395"
     CDS             complement(3289..3609)
                     /locus_tag="R8X70_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HEF2929159.1"
                     /translation="MLDKNILYAILAASLATYLTRVLAFILFKNKKENYHLLFVQYNM
                     PLVIIIILFFYTFYEVDFYSYPYGLDFIVSCILVFLIHLLFKNALLSIILGTIFYMFV
                     LRLF"
     gene            complement(3599..4279)
                     /locus_tag="R8X70_001396"
     CDS             complement(3599..4279)
                     /locus_tag="R8X70_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEF2929160.1"
                     /translation="MKQRELFLLTIPVLMGYIPLGAAFGILAASKDFSLFEILLSSIF
                     IYAGAGQFLLVALVAQNVSFLMIFFTLFLLNFRHFFYTLSLLKELKSINFLRHYIIFA
                     LTDESFALLSSIKEKIKNLSRAQRSLIMFEVCLLNQIYWVMGSVLGYYFKQGLNIDYS
                     GVEFSLNALFIVLAYELYKQNPNLKILLYSSFVALFALFCIDKPYMLAFCIFIALMIL
                     IFGKKYVR"
     gene            complement(4276..4452)
                     /locus_tag="R8X70_001397"
     CDS             complement(4276..4452)
                     /locus_tag="R8X70_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929161.1"
                     /translation="MVFLIPLLIIIAIIFGIDYLYFNDENVKVKEERQIHKSDPNLDK
                     QREEYLKHLFKEKK"
     gene            complement(4466..4801)
                     /locus_tag="R8X70_001398"
     CDS             complement(4466..4801)
                     /locus_tag="R8X70_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HEF2929162.1"
                     /translation="MNLSSVLIVAKVQHIDELKKEILKIPSCSIELCENEKIIVVIES
                     ESLEKELESYKMLEKLPHIISINMVFSYQDLDKDIQKAINSGAIQTIEKNENAENIRY
                     YGSIYNQMS"
     gene            complement(4788..5708)
                     /locus_tag="R8X70_001399"
     CDS             complement(4788..5708)
                     /locus_tag="R8X70_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEF2929163.1"
                     /translation="MKKILFILSFLYILSPAYELKLNSNITALKLDQQELYIGTDKGE
                     IYEYNLKDKSLKELLSLPKIKNYYEGDFARIYNIDVYQNSLLILSEGDFGAKNLSLYN
                     NNLQIQTLQESSVKEAFFIDENTYLLVLLGSKIELVDKDLKRINEFKFSHSSLNDAAL
                     NEEKTKFIAGFESGEVELFDLKSWKILKNYDKMHKDNIYQVDFKNDILISCGTDRRIG
                     LVKNEEQTFLQKDFLIYTCALSPSGKLAAYSDNEEGFNEVFDTNTLKTVRIFKDENLM
                     SEIIIFINERELIISGFGDKIVFRSLDESF"
     gene            complement(5713..6237)
                     /locus_tag="R8X70_001400"
     CDS             complement(5713..6237)
                     /locus_tag="R8X70_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HEF2929164.1"
                     /translation="MMKKKTILLGSVAIMFLAACALNSGVSSEQIGLRKASLENENKV
                     ALVDASFTALQPGESVLFERSFENAPPLISHTIEDMLPITKDNNTCLSCHDKAIATDV
                     GATPLPASHYYDFRTNKTTGDAISDSRFNCTQCHVPQSDAKPLVGNSFKAEFKNEGLK
                     NRSNLIDVINEGVE"
     gene            complement(6234..7019)
                     /gene="napH"
                     /locus_tag="R8X70_001401"
     CDS             complement(6234..7019)
                     /gene="napH"
                     /locus_tag="R8X70_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HEF2929165.1"
                     /translation="MMRYLIARRIVQIGILALFSFKATDFILKGNLSSSRLFDTLPLS
                     DPFAVIQIYLASFSIDLMALMGALIVLILYGVFLGRAFCAWVCPVNLITDFAAFVRSK
                     MAFKQSKVLILSKNLRYYILALSLILSFVLSLPVFESMSYIGIIHRGIIFGTTSWIFI
                     AFILFCIDAFLSPRAICSHLCPLGAFYALISRFALLKIKHNHQKCTKCYKCIGICPEK
                     QVLWMIAKESASVNSGECIRCGRCVEVCNDDALNFNIFDLRKK"
     gene            complement(7016..7756)
                     /gene="napG"
                     /locus_tag="R8X70_001402"
     CDS             complement(7016..7756)
                     /gene="napG"
                     /locus_tag="R8X70_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HEF2929166.1"
                     /translation="MKDRREFFASAFKGLCLCTAGGFLANLSLKADDDYALRPPGAED
                     EARFLSKCIRCGLCVKACPYNTLKLATLLDSAKNGTPFFKAREIPCYLCKDIPCIKEC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITEKPAIRVLPREYVLGKAGSHYVKGWDQE
                     DEDRIKDADTSKYFDAKKATNYLNEGEF"
     gene            complement(7774..10548)
                     /gene="napA"
                     /locus_tag="R8X70_001403"
     CDS             complement(7774..10548)
                     /gene="napA"
                     /locus_tag="R8X70_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HEF2929167.1"
                     /translation="MNRRDFIKNTAIASAASVAGLSVPRPVFGAQEEEWKWDKAVCRF
                     CGTGCGIMIARKDGKIVAIKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMND
                     KGEFDKKGKFKQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKIVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDKKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVAKENAITLDEEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFEEFKKGLAPYTLEYTAKVAKGDDNESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLG
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWITAARDMDNFIVVSDCYPGISAKVADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DDKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKSFTSNDAVMKDYDNSEVKGDERK
                     IQGSDGKEFKGYGFFVQKYLWEEYRKFGLGHGHDLADFNTYHQVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGEFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPNEEYPFWLSTGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
BASE COUNT         3724 a         2078 c         1297 g         3624 t
ORIGIN      
        1 ctcaatcttt tatcaaaata ctatggtttt atttttatgt ataaaaattc tatcatcaaa
       61 aaccaaatca agagcttttg aaagcacatt tttttcaaca ttgcgtccag cttgctgcat
      121 atcttgccaa gtgtattcat gacttacagg caaaactgct tgagtgataa taggaccttc
      181 atcaagatta ttatttacaa aatgtgccgt agctccaatt attttaaccc ctctttcaaa
      241 ggcttgttta taaggatttg ctcctataaa tgcaggtaaa aaagaatggt gaatatttat
      301 aatcttgcct tcaaaatacc taacaaaatc aggagataaa attcgcatat attttgctaa
      361 aaccaaataa tcaaatttat attgttcaag acattttaaa atctgatttt cttgctcttt
      421 acgatctaaa ttttcagcgc tgatgcaatg ataagggatt tcaaattttt ctactaagtt
      481 tttaagagtg tcgtgattag aaatcacggc tttgatatta gcctcaagct cattgctata
      541 atgcttgatc aataaatctc ccaaacaatg gctttcttta gtagcaaaaa caataatatc
      601 tttctttctt ttttcacaaa gctctatata agcttcttct cccaacatcg cctcaagtgt
      661 cccaacaaag gcttttttat caaattcacc ctctaaaata gcgcggaaaa aaaacatttc
      721 ttcgcccaca aattcatcat tttttactat attgatatga tatttaaaaa tcacatcaga
      781 aatacgataa atcaaacctt tttgatcctt ggtgcaaatt tttaatacag aaatcattta
      841 atttaacctt ttaatatatt catataattc attttctctt gcttctttaa gctttaaacc
      901 caacatttta ccataaattc cagcatcaag aaaatctttt gctaaaatac ttgttttaaa
      961 tttgttctca taaagtttga attttttagc ccactttatg cgctctttat cccaaagccc
     1021 aagccattct tttaaaggca tatccaaagc aatacttgct aaatcaaaat cactcatttc
     1081 atcaagataa aaagcttgat ttgccttttt gaaatactct ttttttattt tgcttttttt
     1141 aaaaaattcc tctttgttta aattaaaaaa atttaaatac aaatacaaaa acaaagcatc
     1201 gtctttaact acttctctac tttttctaag caaatcttga aattccatgc ttttaaaagc
     1261 actatcaaag ccaaaaattt ctttttccat attaagctct tgtaaatatt tatagcccac
     1321 ttcaagctta gagcttttaa aaaatttata aagctcagca ttgatcctat ctctgctaag
     1381 atcttttata ttcatgcttt gcattaattt taagctttca tctgctattt taaaatcaaa
     1441 tcttgaagca aaagccactg ctcttaaaat tcttaaacta tcttcttgaa aacttgtttg
     1501 atcaatatgc cttaaaatgc cctgctctag atcttttaat cctccataaa agtctaaaaa
     1561 ctcatcatta aaaagattga tcatcataga atttatagta aaatcgcgtc ttttggcgcc
     1621 taatttttca tcattacaaa tttgcacctc aaaacccgta tgcccataac ctgtcttatt
     1681 ttcagttcta gcaagagcaa aatcataatt tttaaattta tatacaaaaa aactttttcc
     1741 aaagccttgc gcgcctagtt ttttcatcat tttttcaaaa tcactaggcg ttatatcgta
     1801 aagctctata tcataatcat aaatttctaa acctaaaaat aaatccctta cactcccacc
     1861 aaccaaataa gccctttgag tatagggact tagaaaatca atgacaaatt ttaaatctgc
     1921 attatttttt aagcttatct tcgatgtttg caagcaaaaa ctctaaaaaa ttaatagtta
     1981 attgaagtct gtgttccaaa ttctcctcct taacactatt taaaccctca aaaagaacca
     2041 aaattctttc tctaaggtgt tttaaaaata tatcttcatt aagagtttgc acctctgcta
     2101 taatactagg gtttaaaatt tcactttgca aaacagcctc ttctttaact ggctctttat
     2161 tttcttgatt taattcatct aaatttttta tctcttcttg aattttttgc tcttcttcaa
     2221 atttcgccat agaaatttta tcttctaatt cttgctccaa aataggctct tccttaagtt
     2281 taaccgtagg catatcctct tgaatttgag tctttctaag ctcttcttgt tcttttagaa
     2341 tttcactttg ccttctttgt tcttccatga tagagctaac ttcactgata gttttctttg
     2401 ccaaatcttc taaattcata tttttatcaa ccacctttta aattcattga tctcttcatc
     2461 gcttttcata tttataaaaa aatcaagcat ttgagtattt aaatcctgat gcttagaacg
     2521 aaacccacta agacgacgca ctgcatcaat tgcattttgg ttattaggat cttcttttaa
     2581 aatattttta taaatctcta aagcttcatc cttaagccct tgggcttcat aaatggaagc
     2641 ttctgtaact gtgtttttca ttatctttcc taatattttt tttaatttta gcaaaaagca
     2701 ttttaagtta aactttatat aatacgctaa gagccattgc aaagataaac aaagcgctga
     2761 ttttattgat tttatctaaa tgcttattca taaagatctt aaatatactt ccacctaaag
     2821 cataaagact taaagagcaa aattctatca acaaaataat caaaagcaaa atatttacat
     2881 tcacttgaaa ttttaaaaaa gaaggcaaga tgaaaaacat aaaaatccat gcttttggat
     2941 tagaagatga agctataaag ccttggatga taagagaaaa ttttttctta tggatgattt
     3001 tttcttgagt aatttgactt tttgatttaa acaatataaa agcaatatat aaaagatata
     3061 aagcacccgc tatttgaaaa aatttaaata aattttcata tcgcaaaata aactctatcc
     3121 ccaaagcaca acacaaaacc actaatgcta atcccacaag ctcgccaaat atcatccata
     3181 aagtattttt atatcctaaa gaaagtccca aggaaaaagc taggctcata cacaatcctg
     3241 gcagtaaaga aaccgaaaca aaagtcaaga taaataaagt atagtccatt aaaacaatct
     3301 taacacaaac atataaaaaa tagttcctaa aataatgcta agaagtgcat ttttaaaaag
     3361 cagatgtatc aaaaatacca aaatacaaga gacaataaaa tcaagcccat aaggataaga
     3421 ataaaaatcc acctcataaa aagtataaaa aaataaaatg atgatgataa ctaaaggcat
     3481 attatactgc acaaaaagca agtgatagtt ttctttttta tttttaaaca aaataaaagc
     3541 taaaacacga gttaaataag tcgctaaaga agctgctaaa atcgcatata aaatattttt
     3601 atctaacata tttttttcca aaaatcaaaa tcatcagagc gataaaaata caaaaagcca
     3661 acatataagg cttgtctatg caaaataaag caaaaagtgc cacaaaagaa gaataaagta
     3721 aaatttttaa attaggattt tgtttataaa gctcataagc tagcacaata aaaagggcat
     3781 taagactaaa ttctacaccc gaataatcaa tatttaaacc ctgcttaaaa taataaccca
     3841 aaacagaacc cattacccaa taaatttgat tcaataaaca aacttcaaac ataataagcg
     3901 atctttgcgc acgactaaga tttttgattt tctctttaat agagcttaaa agagcaaaac
     3961 tttcatctgt taaagcaaag ataatatagt gccttagaaa attaatggat tttagctctt
     4021 ttaaaagtga taaagtatag aaaaaatggc gaaaattcaa taaaaacaaa gtaaaaaaaa
     4081 tcatcaaaaa agatacattt tgcgccacta aagctactaa aagaaattgc ccagcacctg
     4141 cataaataaa aattgaacta agcaaaattt caaacaaaga aaaatcttta ctagcagcta
     4201 aaattccaaa agcagcccct aaagggatat aacccattaa aacagggata gtaagaagaa
     4261 agagttctct ttgcttcatt ttttctcttt gaataaatgt tttagatatt cttctctttg
     4321 tttatctaaa tttggatcgc ttttatgaat ttgtcgctct tcttttactt tgacattttc
     4381 atcattaaaa tacaaataat caataccaaa aataatagct ataataataa gcaaaggaat
     4441 taaaaaaacc atctaaaagc tttaatcaag acatttgatt gtaaatacta ccataataac
     4501 gaatattttc agcattttca tttttttcta tagtttgtat cgctccgcta tttatagctt
     4561 tttggatatc tttatccaaa tcttgataag aaaaaaccat atttatactg ataatatgag
     4621 gtaatttttc aagcattttg taagactcaa gctctttttc taaactttca ctttctatca
     4681 caacgatgat tttttcattc tcacaaagct ctattgaaca tgaaggaatt tttaagattt
     4741 ctttttttaa ttcatctata tgttgtactt tagctacgat caaaacgcta gaaagattca
     4801 tctaaactcc taaatacaat tttatctcca aagcctgaga taatcaattc tctttcgttg
     4861 ataaaaatga taatttcact cattaaattt tcatccttga aaattctaac agtttttagg
     4921 gtatttgtat caaaaacctc attaaaaccc tcttcattat cactatacgc agccaatttc
     4981 ccactaggac ttaaagcgca agtatagatt aaaaaatctt tttgcaaaaa agtttgctct
     5041 tcatttttta ccaaacctat acgcctatct gtgccgcaac ttataagaat atcattttta
     5101 aaatcaactt gatagatatt atctttgtgc attttatcat agttttttaa tattttccaa
     5161 cttttcaaat caaaaagttc cacctcccca ctttcaaatc ctgctataaa cttggttttt
     5221 tcttcattta aagctgcatc atttaaacta gaatgagaga atttaaactc atttatacgc
     5281 tttaaatcct tatcaacaag ctctatttta gaacccaata aaaccaaaag ataggtattt
     5341 tcatctataa aaaaagcctc tttaacactg ctttcttgaa gtgtttgaat ttgaagattg
     5401 ttattataaa ggcttaaatt ttttgctcca aaatcgcctt cgctaagtat caaaagagaa
     5461 ttttgataaa catcgatatt ataaattcta gcaaaatcac cctcataata atttttaatt
     5521 ttaggcaaag ataaaagttc ttttaagctt ttatctttta gattatactc ataaatctca
     5581 cccttatcag tgcctatata cagctcctgc tgatcaagct ttaaagctgt aatatttgaa
     5641 ttaagcttta gctcataagc aggagataaa atatataaaa agcttaaaat gaaaagaatt
     5701 tttttcatta ttttactcaa caccttcatt aattacatcg attaaattag aacgattttt
     5761 caagccttca tttttaaatt cagccttaaa actatttcca actaaaggtt ttgcatcact
     5821 ttgtggaaca tgacattggg tacaattaaa gcgcgaatca ctgatcgcat ctcctgtggt
     5881 tttattagtt ctaaaatcat aataatgact cgcaggaaga ggagttgcgc caacatcggt
     5941 tgcaattgct ttatcatggc aactaaggca ggtgttatta tccttagtaa taggcaacat
     6001 atcctcaata gtatgcgaaa taagcggtgg tgcattttca aaagaacgct caaaaagcac
     6061 agattcacct ggctgtaaag cagtaaaact agcatcgacc aaagctacct tattttcatt
     6121 ttccaaactt gctttcctaa gtccaatttg ctctgaactc accccactat ttaacgcaca
     6181 agcggctaaa aacattatag caacgcttcc tagtaaaatc gttttctttt tcattatttt
     6241 ttccttaaat caaatatatt aaaatttaaa gcatcatcgt tacacacttc tacacagcgt
     6301 ccacatctta tacattcccc cgaatttaca ctcgcgcttt ctttagctat catccaaaga
     6361 acttgttttt caggacaaat tccaatacat ttataacact tagtgcattt ttgatgattg
     6421 tgcttgattt ttaaaagcgc aaaacgagag atgagagcat aaaaagcccc taaaggacac
     6481 aaatgcgaac atatcgctct aggactcaaa aaagcatcta tacaaaaaag tataaaagct
     6541 ataaatatcc aagaagtggt gccaaaaata atccctctat gtataatgcc tatataagac
     6601 atactttcaa atacaggcaa agacaataca aaagaaagaa ttaaactcaa agctaaaata
     6661 taatatctta aatttttact taagattaaa accttactct gtttaaaagc cattttagag
     6721 cgaacaaagg cagcaaaatc agtaatcaaa tttacagggc atacccaagc acaaaaagca
     6781 cgacctaaga aaactccata aagaattaaa acgatcaaag ctcccataag tgccattaaa
     6841 tctatgctaa aacttgctaa ataaatttga atcactgcaa aaggatcact taaaggcagg
     6901 gtatcaaaaa gcctagaaga acttaaattt ccttttaaga taaaatccgt agccttaaaa
     6961 ctaaaaagag ctaaaattcc gatttgaacg atgcgtctag cgattaaata cctcatcaaa
     7021 attctccctc atttaaataa tttgttgcct ttttagcatc aaaatattta gaagtatctg
     7081 catcttttat acgatcttca tcctcttgat cccagccctt tacataatgc gaaccagcct
     7141 tacctaaaac atactcgcgt ggtaaaacac gaatagcagg tttttccgta atacacgcaa
     7201 gctcgcaaag cccacagcct acgcatactt catgatcaac actaggcaat aaaaaggcgt
     7261 gcttagcagt gcgctcattg cgtttaagtt caagttttaa agccctatct atcaaaggac
     7321 aagctctata acaagcatca cactgaattc cccaatgcgc tacacaagaa gcactatcta
     7381 cgatcgcaat acccattttt aaagattcta tgccctgctc taaatgtttt ttatccaaag
     7441 catcggttgg acattcctta atacatggta tgtccttgca aagataacaa ggaatttctc
     7501 tagccttaaa aaaaggagtt ccgttttttg cactatctaa caaagtagca agttttaaag
     7561 tattgtatgg acaggctttt acacacaaac cacaacgaat acatttgctt aaaaatctcg
     7621 cctcatcttc agctcctggt ggcctcaagg cgtaatcatc gtcagccttt aagcttaaat
     7681 ttgccaaaaa tccacccgca gtacaaagac acaaaccttt aaaagcacta gcaaaaaatt
     7741 ctcttctatc tttcatcaaa tcaaaccttt atcttaagct ttatagattt ttaccgcaca
     7801 ttttttaaag tcagtttgct tagaaagtgg gcaagttgca tctagagtaa ctttattgat
     7861 atatacattc tcatcaaacc aaggcacata aacaagtcct acaggtggtt tgtttctgcc
     7921 acgcatatct actcttgctt ttactttacc acgacgcgat tctacccaaa ctaaatctcc
     7981 ttgatttaaa cctaattttt caccatcttt ttcactcata taacaaagtg cctctggaac
     8041 agcacggtaa agctctggca cacgcatagt catagtccca ctatgccaat gctctaaaac
     8101 ccttccagtt gaaagccaga atggatactc ttcatttggt ctttcaggtg ctttcataaa
     8161 tggtctaaag aaaattttag ctttattttt aatactatgt tctttttcat ccttaggagc
     8221 tatcaaatcc ccattggtaa gcattttatt aaattcacca tagaaagcaa aatctgaatt
     8281 tggagcagct tttttggcat aataatcaaa tttagtatta aatctccatt gtgtttcttt
     8341 accatttacc actggccatc ttagacctct tacttgatga taagtgttaa aatcagccaa
     8401 atcatgacca tggcctaaac caaatttacg atactcttcc caaagatatt tttgaacaaa
     8461 aaagccatat cctttaaatt cttttccatc actgccttga atttttcttt catcaccctt
     8521 aacttcacta ttgtcataat ctttcataac agcatcattt gaagtaaagc tttttgcttc
     8581 tttattggca aataaaacat caaaaagcgt atcatcttcg ctataaccca tagcttttgc
     8641 ttcttctagt acacttggta aagtaagctt atcatctact ttttgttctt tccaaacctc
     8701 tttaagctta aagcgttttg caaattctaa aatttgccaa gtatcactca tagcagcacc
     8761 tacaggtaaa acttgttgtt tccagtgttg agttcttctt tcagcattac cataagcacc
     8821 ccatttttca taaatcatcg cacttggcaa gataagatcg gctacttttg ctgaaattcc
     8881 aggataacaa tcactcacaa cgataaaatt atccatatct ctagctgctg tgatccagtg
     8941 atttgcattt gcggtatttt gccatggatt atttacttga acccaagcaa atttaatttt
     9001 accatcctct aaatccctca taataccaag ataaggcgaa cctggttttg gattgattgt
     9061 ttttgcaggc actttccaaa ttttttctga aatttctctg tgttttggat ttgccacgac
     9121 catatctgca ggcaagcggt gagagaatgt tcctacctct ctagcagttc cacaagcact
     9181 tggttgtcct gttaaagaga aagccccgct acctggctta gcttgtttgc caagtaaaaa
     9241 atgcaccata taagcttgtt catttaccca agagcctctt gtgtgttggt taaagcccat
     9301 agtccaaaag ctcactactt tacgattttt ttctatatat aaattagcca attcttggag
     9361 ttttttctta aaatcttcta aagattcatt atcatcaccc ttggctactt ttgcggtata
     9421 ttctaaagta taaggtgcta aacctttttt gaattcttca aaagaaattt cccaattctt
     9481 atcagctacg ccttgatgtt tcatttcaaa tttatcaccc gctttcacac caagataaga
     9541 aagagaggtt gcttcttctt catctaaagt gattgcattt tcttttgcaa cggtatcttt
     9601 ttcgctttct ttaaatttag gatggtttgg attatttctc atgccataac caatatctgc
     9661 ataacctgtt gcaaatacac aatgatcttt aatgaatttt ttatccatag cttcaggatg
     9721 attataaaca atctctcttg ctatatagtt ccaaatagct aaatctgtat taggtttaaa
     9781 aatgatttca atatcagcaa tatttgaagt acgattagaa aaagtgctta aattcacaat
     9841 tttaacttta tcaagattgc ttagctttct atcgctaact cttgaccaaa ggattgggtg
     9901 catttcagcc atattagctc cccaagtgat aatagtatct gtaagctcta tatcatcata
     9961 acagcctgat ggctcatcta caccaaaagt ttgcataaaa ccaaccactg cagaggccat
    10021 acaatgtctt gcatttggat cgatattatt tgttctaaaa cccgcttttg caagttttaa
    10081 agcagcataa ccttcttgga tagtgtattg cccactacca aaaatcccta tacctgtaac
    10141 gccgagttca ttgtaggctt ttttaaattg tttttccatt tcatcaaagg ctctttgcca
    10201 ggaaacttgc ttgaattttc cttttttgtc aaattctccc ttatcattca tacgaagcaa
    10261 aggcataaca agacgatctt ctccatacat gattttagcg ttaaaatatc ctttaataca
    10321 attaagacca cgatttacag gagcagcagg atcacctttg attgctacaa ttttgccatc
    10381 ttttctagct atcataattc cacagcccgt tccgcaaaat ctacaaacgg ctttatccca
    10441 tttccattct tcctcttgtg cgccaaatac tggccttggg acactaagac ctgcaacact
    10501 agcagcactc gcaatagcgg tatttttaat aaaatccctt ctattcatac tctaatcctc
    10561 caaaataata aaaatcattt tattataaaa aataaaaaat aaaattatct tgaatttttt
    10621 gcaaaaaata ataatttcaa agccctattt tataggactt ttattgtcct tttatcattt
    10681 ttgaaataat aagattataa aaaataaaac aggctagaaa act
//
LOCUS       DAQUWA010000058        10652 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.058, whole genome shotgun sequence.
ACCESSION   DAQUWA010000058 DAQUWA010000000
VERSION     DAQUWA010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10652
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.058"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            49..429
                     /locus_tag="R8X70_001404"
     CDS             49..429
                     /locus_tag="R8X70_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929168.1"
                     /translation="MEKYFLKIDLKSNPVPYKRTTQRSKFACKDYLKYLDFKKLLQME
                     FRRQNNISCFQAFDKQKKYEFSLKIGFNSKRHGDGDNIVKCVLDALFENDKNVLKGDY
                     EIISFKKSFLDLEIKEFNFKEGVA"
     gene            429..815
                     /locus_tag="R8X70_001405"
     CDS             429..815
                     /locus_tag="R8X70_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929169.1"
                     /translation="MARMMTNGKSITKEELVSKIENYFSEKTVLKETKESVIFAPKTK
                     VGLAVHLGISMQTLNEWEKDKDFGEIVANAKQRCEMDILNHSLIGTYTPSVSMFLLKN
                     QHGYVDKQEILSDNVQKIEIIRSEIK"
     gene            812..2104
                     /locus_tag="R8X70_001406"
     CDS             812..2104
                     /locus_tag="R8X70_001406"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929170.1"
                     /translation="MKLKLDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVI
                     ENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMR
                     SAERRENMEGFGYDLVILNEAGIILKGSKGEYIWYNAIRPMLLDNPKSRAIIGGVPKG
                     KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEDSEVVKQEIYGEF
                     IDSGGAELFSLTEIENAMSKNSFSIEKMQGENIWGLDVARYGDDKSVLAKRKGFVVDE
                     IKKYSQLGTMELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDVLLNYGLPVFEANSA
                     NSATSNEYLNKRAQMYFTFAKNLKHMEIIKDEELKKDMRMIEYEYSDKGLLKIVSKEQ
                     LKKNYGKSPDVSDAVALTFFEKLYSRNNTNEDWSYDGW"
     gene            2094..2366
                     /locus_tag="R8X70_001407"
     CDS             2094..2366
                     /locus_tag="R8X70_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002924542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929171.1"
                     /translation="MAGEFLMIYDAIDVNKIKKLSNLSDEAIKSSLANEFLELVSGFN
                     NISKKKFKREFAEFLFEKGVNEKDILKITNLSKTTIWRIMNENKKN"
     gene            2347..3882
                     /locus_tag="R8X70_001408"
     CDS             2347..3882
                     /locus_tag="R8X70_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929172.1"
                     /translation="MKTKRTNDERVSFLTQLIRESKSGYENYKPHFKELQDAYLLENK
                     VMQKLRKRNKSSIYIPKINSKVKYLITSLNEVYFNSERMADIETYINSDDTIIELWQN
                     AIDFYSGKINMFKIFQPLFLDVLLVGTSIAKLTWHKGMPRIERVDIDSIFFDPNALNS
                     EDIGYIVNEIYLTYNQIHERQKLGFYKNIEIEKLFDEDDEYKKVKLYDIYERKNDDEW
                     VVSTLFENNLLRNEVTLQDGQPFIWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDE
                     INITRNLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDDPKGIQILPPPNINS
                     SGINLQLLESELTEVTGVSPQNNGAQTAQNETATEISIKAQEGGRRSADYIRQYNETF
                     IEPLFDRFAMLVFKYGEDSFFNGFQREDIPSFRFKIQTGTGAMNKEVRRAGIQASMQV
                     FSGLYQMYMSIGDANSAYGIINASKELTKELLPILGVKNVNSLFAFENKQEIQQGETN
                     AQY"
     gene            3869..4072
                     /locus_tag="R8X70_001409"
     CDS             3869..4072
                     /locus_tag="R8X70_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929173.1"
                     /translation="MLNIEIKSDISKTKGGKNLIDFIKAKYSECFYIAKNNDEKELRL
                     KALDTMAFLDIIINKIKDEEDGK"
     gene            4062..4709
                     /locus_tag="R8X70_001410"
     CDS             4062..4709
                     /locus_tag="R8X70_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929174.1"
                     /translation="MENDALKDLINVITDDDKGDVANNGDEPTQVEDNEPMPVDNENE
                     PDYKAMFEAYKSENDNKLNALMSELEALKNPKKEPSEQELQREQYLKELGLDGLDEKL
                     KRLEELDKKQKDKEEQDALIAKYAQVESELRKAYPDADLKAMAELATKLNGLGEGNID
                     SWKTLLNLVGKSNNAKKAEDLSSANNNVRTSDFNDKLKKGEVSEIDLGKELLSLV"
     gene            4720..5100
                     /locus_tag="R8X70_001411"
     CDS             4720..5100
                     /locus_tag="R8X70_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929175.1"
                     /translation="MDFITALKGGTGLGSSFADTLMKTSNFTPNLASSSGGFLNGLKN
                     SFSNFGDWLFKSSDANKVTNFDRLGNVLGAGGALYGAYNQQKMAKKNFDLQKDAYSFN
                     KFLANEELNRRKNMENKLQNVWSN"
     gene            5365..5577
                     /locus_tag="R8X70_001412"
                     /pseudo
     CDS             5365..5577
                     /locus_tag="R8X70_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049716.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6421..9678
                     /locus_tag="R8X70_001413"
     CDS             6421..9678
                     /locus_tag="R8X70_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929176.1"
                     /translation="MTIQIPQGAKTMQLFDMNIDIPEGKTYIDIDDNFLQNKYNQFMQ
                     NNQQQNNFNSQEELALDGKPMSMYQAPQVSQNEPQEQGVWSKINKGLEDFNNLIDPKR
                     MISEGLDYLSPKVTSGEEGVRQKIEDATNQVSGGLLPRIFTSPSNEEQKQIFQIAYDE
                     IKKLGYEPFLEINNGDYKYIGVDKNGKEVDFTPSFRNTLASTKNELAFSVAGGYAGSL
                     AKTAGQTIAKKALNYFAPSAIGAGSGAVSDLHSQSNNTGIEVSYMDYAKRFGSAAAED
                     ALAGAVVGSAIKGIGKTYKSVGDLISSVKTGAQAGKDMIDGMAVKGGNLGNRVIDKIT
                     QKDIPMIGKFTDGGLQNAETIFNNLTKNVENKKQIDELIAKENPTYLENGKPTIEILK
                     NFVEQGLNKNNPQFIQDSAKRTSAILKNISNALQGVPTTQRREILLKSAQAYPEIGSF
                     LDDVLKSDKDASISFLNIIKEQDEVFKNKTGLNGEFDYKAWQKDNSSYKKRINNEYAQ
                     AIKSIDELNNGSIRLSKEGLAKIEEFKNNNFLEQDIKTNISSFLEDAIDKDLSAEQIF
                     NLRSAINKQLATGNKTYNTKEAYRLVKDTLDETMIKNASDKELAKKILEDANKNYALK
                     ENFNNSYLGKIKDQETPEALAQRIANGARNINEDKDLKRAFEGMNEAERKANEKHAFN
                     ALLAKHRIEDIGYDFKNLAKDMDNVEFVSKDLKYAKEVVNVYAKIYQNNKDLIMTALA
                     SSGKKTNSSIATTIQGVFDRILISGILARLHALVPFVKSAKEQALRNQILDALKLAKT
                     NKEVISNLKNIKIADKEQSRIFKDALDNYIKVDKEQNKILKDALIKEGVIKGDNFFMD
                     KADPSKAKSDLNVKISVSPNVRNLAKLTNDEIIADLEYLANKHKEMFKKPSDVFKLIK
                     EIKENPTFFYKNNRMDIALIAKRLNDNKLGKLGVNKDTGEVRHITKSRNADKENERII
                     KRDGKNPLVESPYSTQPVLSKDAEPTANGANALSKGNNPNSTQTKPKKNLMEDIKENI
                     EAKEVEKKNKKSVKQRLDEKIQDDKKAREERIKKIKQVIARKQKIDKVTDKKNNR"
     gene            complement(9844..10290)
                     /locus_tag="R8X70_001414"
     CDS             complement(9844..10290)
                     /locus_tag="R8X70_001414"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929177.1"
                     /translation="MKKSQKQKTPNTIKQENQNKENPSQTFNTQLNFLMENELNAIGK
                     LPKDLADRIVTMLEKSLEYKKDNDNKILDLENKNIEIRKKDIKSYHFWNGFGMVSFLL
                     ITITSICVGLYLILNGHNEGAYFAFILGALTLLPKIIDSIKNKPKN"
     gene            complement(10259..10435)
                     /locus_tag="R8X70_001415"
     CDS             complement(10259..10435)
                     /locus_tag="R8X70_001415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929178.1"
                     /translation="MTKTQAFVDGFVGKPIKNECFNLWDLNAIIREKQAKLYKENIEF
                     REKQIEKITKTKNT"
     gene            complement(10447..10632)
                     /locus_tag="R8X70_001416"
     CDS             complement(10447..10632)
                     /locus_tag="R8X70_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004306057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929179.1"
                     /translation="MLNINAFLFGFTNMFNADILKATSLKDRKTMISDFHKKSEELRK
                     HSNEEYNAKFEKITKQK"
BASE COUNT         4404 a         1262 c         1889 g         3097 t
ORIGIN      
        1 aagcaaaaaa gcttttaaaa aaataagcta attttaagaa ggcctgaaat ggaaaagtat
       61 tttttaaaaa ttgatttaaa aagcaatcct gtaccttata aaagaaccac gcaaagatct
      121 aaatttgcat gtaaagatta tcttaaatat ttagatttta aaaaactctt gcaaatggag
      181 tttagaagac aaaataatat tagctgtttt caagcctttg ataagcaaaa gaaatatgag
      241 ttttctttaa aaataggatt taacagcaaa aggcatggcg atggggacaa tatcgtaaaa
      301 tgcgtgttag atgcgttatt tgaaaacgat aagaatgttt taaaaggcga ttatgagatt
      361 attagcttta aaaaatcttt tttagactta gaaatcaaag aatttaattt taaagaaggg
      421 gtggcttgat ggctagaatg atgacaaacg gcaaaagcat cacaaaagaa gagcttgtat
      481 caaagataga aaactacttt agtgaaaaaa ctgttttaaa agaaactaaa gaaagtgtta
      541 tttttgcacc taaaacaaaa gtgggattag ctgtgcattt agggatttca atgcaaactt
      601 taaatgagtg ggaaaaagat aaagattttg gagaaatagt agcaaatgca aaacaaagat
      661 gtgaaatgga tattttaaac cattccttaa tcggtactta tactcctagc gttagtatgt
      721 tcttgctaaa aaatcagcac ggttatgtag acaaacaaga aatactcagc gataatgttc
      781 aaaaaataga aattataaga agtgaaatca aatgaaatta aagcttgact tttcttacac
      841 tcctgcacaa cttaaagttt ttgatgataa aaatccacgc tttataaccg tagcaaaagg
      901 cagaagactt ggttttacaa ggggaagtgc taagtttgtc atagaaaact tgcttttagg
      961 acaaaatgta ttatgggtgg ataccataca agcaaactta caaaactatt acgagctata
     1021 ttttacacct gagttaaaaa acttgccaaa agatttttat tcttggagtg tgcaagataa
     1081 gaaactaatc attaatggag cagtgcttca tatgagaagt gctgaaagaa gggaaaatat
     1141 ggaaggtttt ggatatgacc ttgttatttt aaacgaagca ggaattattt taaaaggcag
     1201 caaaggagaa tatatttggt ataacgccat acgccctatg ctacttgata atcctaaatc
     1261 aagagcgatt atcggtggag ttcctaaagg aaaaaatcta ttttatgaac tttgcagaaa
     1321 agaactcagc gataaaaatt ggaaacattt tcaattctca agttatgata atccattttt
     1381 aaaagaagag caaattaaag aattaattga agaagtaggc ggcgaagata gcgaagtagt
     1441 caaacaagaa atttatggag agtttataga tagcgggggt gctgaattat tttctctaac
     1501 tgaaattgaa aatgcgatga gcaagaactc ttttagtatt gaaaaaatgc aaggtgagaa
     1561 tatttggggg cttgatgtag caagatatgg agatgataaa agtgttttag caaaaagaaa
     1621 aggttttgta gttgatgaaa taaaaaaata ctcacaactt ggaaccatgg agttagcaaa
     1681 taaaatatta gctgaatata accaaagcga agacaaacca aaaggtattt tcatagatac
     1741 ttgcggtctt ggcgttggcg tgtatgatgt cttgttaaat tatggcttgc ccgtatttga
     1801 ggcaaattct gcaaattctg caaccagtaa tgaatactta aataaaagag cgcagatgta
     1861 ttttacattt gcgaaaaatt taaaacacat ggagattatt aaagatgaag aattaaaaaa
     1921 agatatgaga atgattgagt atgaatatag cgacaagggg cttttaaaga tagtttcaaa
     1981 agaacaatta aaaaagaact atggcaaaag tcctgatgtt agcgatgcgg tggctctaac
     2041 tttttttgaa aaactataca gcagaaacaa tactaatgaa gattggagtt atgatggctg
     2101 gtgagttttt aatgatttat gatgcaattg atgtaaacaa aataaaaaag ctttcaaatt
     2161 taagcgatga ggctataaag tcaagtcttg caaatgaatt tttagagctt gtatcaggat
     2221 ttaataatat ttctaaaaag aaatttaaaa gagaatttgc ggagttttta tttgaaaaag
     2281 gagtgaatga aaaagatatt ttaaaaataa caaatttaag caaaacaaca atatggagaa
     2341 ttatgaatga aaacaaaaag aactaatgat gagagagtat cgtttttaac acaactcatt
     2401 agagaaagta aaagtggata tgaaaattac aaaccacact ttaaagagtt gcaagatgct
     2461 tatttgcttg aaaataaggt aatgcaaaaa ttgagaaaaa gaaataaatc aagtatctac
     2521 ataccaaaaa taaactctaa ggtaaaatac ctaatcacta gcctaaacga agtttatttt
     2581 aatagcgaaa gaatggcaga tattgaaact tacattaata gcgatgatac gattatagag
     2641 ctttggcaga atgccataga tttttatagc ggtaaaatca atatgtttaa gatttttcaa
     2701 ccgcttttct tagatgtttt acttgtggga acaagtatag ctaagcttac ttggcataaa
     2761 ggaatgccac gcattgaaag agtagatatt gatagtatat tctttgaccc aaatgcacta
     2821 aatagcgaag atataggcta tatagtcaat gaaatttacc taacttataa tcaaatccat
     2881 gaaagacaaa agctagggtt ttataaaaac atagaaattg aaaagctttt tgacgaagat
     2941 gatgagtata aaaaagtaaa gctttatgat atttatgaaa gaaaaaacga tgatgagtgg
     3001 gtggtttcta ccttatttga aaataattta cttagaaatg aagttacttt gcaagatgga
     3061 cagcctttta tctggggttc aatgctacca caacttaaaa agatagataa tgaaaactat
     3121 gtaagtgctt atggcgagcc tataatggct tctgctatgc ctttgcaaga tgaaattaac
     3181 atcacaagaa atcttttaat cgatgcagta agaactcata ttatgccaaa aataatgatg
     3241 ccaaaatcaa tgggagtaag cagagaagat atagaaaccc taggaaagcc tatatataca
     3301 gatgacccca aaggaattca aatactgcct cctccaaata taaatagttc tggaataaat
     3361 ttgcaattat tagaaagtga gctaacagaa gttacaggag ttagtccaca aaacaatgga
     3421 gctcaaactg cacaaaatga aacagcaaca gaaataagca taaaagcaca agaaggtgga
     3481 agaagaagtg ctgattatat aagacagtat aacgaaacct ttatagagcc tttatttgat
     3541 aggtttgcaa tgcttgtttt taagtatgga gaagatagtt tttttaatgg ttttcaaaga
     3601 gaggatatac ctagttttag atttaaaatt caaaccggca caggagccat gaataaagaa
     3661 gttagacgtg caggaattca agctagtatg caagtttttt ctgggttata tcaaatgtat
     3721 atgagcatag gcgatgcaaa ttctgcttat gggattataa atgctagtaa agaacttact
     3781 aaagaattat taccaatttt aggtgtaaag aatgtaaata gcctatttgc ttttgagaat
     3841 aagcaagaaa ttcaacaagg agaaactaat gctcaatatt gaaattaaaa gtgatatatc
     3901 taaaactaaa ggaggaaaga atttaataga ttttatcaaa gcaaaatata gcgaatgttt
     3961 ttatatagca aaaaataatg atgagaaaga gttaaggtta aaagctttag atactatggc
     4021 ttttttagac ataataatca ataaaataaa ggatgaagaa gatggaaaat gatgctttaa
     4081 aagatttaat aaatgtcata acagatgatg ataaaggaga tgttgctaat aatggcgatg
     4141 aacctacgca agtagaagat aatgaaccta tgccggttga taatgagaac gagcctgatt
     4201 ataaggcgat gtttgaagct tataaaagtg aaaacgacaa caaattaaat gctttaatga
     4261 gtgagcttga agctttaaaa aatccaaaga aagaaccaag cgaacaagaa ttacaaagag
     4321 agcagtattt aaaagaatta ggacttgatg gacttgatga gaaattaaaa aggcttgaag
     4381 agcttgataa aaagcaaaaa gacaaagaag agcaagatgc actaatcgct aaatacgcac
     4441 aagtagaaag cgagttaaga aaagcctatc ctgatgcgga tttaaaggct atggcagaac
     4501 ttgccacaaa attaaatggt ttaggcgaag gtaatattga cagctggaaa accttactta
     4561 atttggtcgg aaaatcaaat aatgccaaaa aagctgaaga tttatcaagt gcaaataata
     4621 atgtaagaac tagtgatttt aacgataagt taaaaaaagg cgaagttagc gagatagatc
     4681 taggcaaaga attattaagt ttagtataaa ggagaaatca tggattttat aacagcttta
     4741 aaaggtggta caggactagg ctctagcttt gcagatactt tgatgaaaac aagcaatttt
     4801 actccaaatt tagcaagtag cagtggtggt tttttaaatg gattaaaaaa ttcttttagt
     4861 aattttggag attggttatt taaaagttct gatgcaaata aagtaactaa ttttgataga
     4921 ttaggaaatg ttttaggcgc tgggggcgct ttatatggtg cttataatca gcaaaaaatg
     4981 gcaaagaaaa attttgattt acaaaaagat gcttatagct tcaataagtt tttagccaat
     5041 gaagagttaa acagaagaaa gaatatggaa aataaacttc aaaatgtttg gagtaattaa
     5101 atagatttgg atttaaggag tttgttttaa agggtaaatc ttaacccctt gtataagggg
     5161 ctttgtttat tgattgttaa tttgcattga caacaataat acaaagtagt ataataacta
     5221 ttaagatttg tagcatctta tttcaccgcc tttctaggtg gtaatttagt gctaagggtg
     5281 gcgaccctta gcaccacacc ttttaaaatt atacacaaac ttccttaaat cctttatttt
     5341 aaaagaaaga ataaaggaaa caaaatggca ttttataacc cacaaagagt agtatttaat
     5401 cctgatacag gcgttataca aaacgcagga aaagtcggtg gtgtcttata tgacatcatg
     5461 agcaaaagtt ttgatgataa agttaaagct aatgagtttc agcaagagca agatttaaga
     5521 aagcaacaaa tggaatttaa tcaggctatg caaaataatc agcttttgca aaatgaattt
     5581 aataatgctt tagccttgca aaaatttgac cttgaaagac aaagacaagt tcaagataat
     5641 gctttaaatt gggctaaata taaagaagat aaagattata atcaaaaata tttagattat
     5701 ttaactggta aaaatagtaa tatagttact aataaaacta ataataattc aggctttagt
     5761 atagatgcta atggtaattt aagtgaaccg caaacaatga gagatgtttt tagcaaagaa
     5821 agtaatggcg gggatttgta tcattttgca aaaaccacta aaacgcaaaa tataaattta
     5881 aatgatattt atggatttgg agataccata aatcaaaaat taagaaatac tccttttagt
     5941 agtagtaaaa acttaaaaca agaattcgca gataagctaa aagctgaaat aaatttagca
     6001 ctagttaata tcacaagtgg caggatgagc aatgaagata ggcatagatt agaagaattg
     6061 gttaaaacag atagttttta cttctttgat aagtatgcta aacatgatat tgaaaaagca
     6121 gtagaaatac tatatagagt aaaaaatgat gccttaaaaa aagaatatat ggatatttgg
     6181 aaaacagaaa ggtatttaaa agatagagat aatatagaaa attattataa caatatgtat
     6241 aaaaagctag aaaatgaaaa ggctatgata aaagatttta taaatgctgg aaatatttta
     6301 gcttctcaag agcaaagagt gccattaaat aagattctat cacaacaacc gcaacaacaa
     6361 ttaaaccaag attttttaca acaaaacaat atgattacat ttagataata aggataaaag
     6421 atgacaatac aaataccaca aggtgcaaaa acaatgcaac tttttgatat gaatatagat
     6481 ataccagaag gaaaaactta tatagatatt gatgataatt ttttgcagaa taaatataat
     6541 caatttatgc aaaataatca gcaacaaaac aattttaatt cacaagaaga attagcttta
     6601 gatggtaagc ctatgagtat gtatcaagca ccacaagtaa gccaaaatga gccacaagaa
     6661 caaggagtat ggagtaaaat aaataagggt ctagaagatt ttaataacct tatagatcca
     6721 aaaagaatga tatctgaagg attagattat ctttctccaa aagttacaag cggagaagaa
     6781 ggagtaaggc aaaaaataga agatgctaca aatcaggtat caggtgggtt gctacctaga
     6841 atttttacta gccctagcaa tgaagagcaa aagcaaattt ttcaaatcgc atacgatgaa
     6901 ataaaaaaat tagggtatga accattttta gaaataaata atggagacta taaatatata
     6961 ggcgttgata aaaatggaaa agaagttgat tttactccta gctttagaaa tacacttgct
     7021 agcactaaaa acgagttagc attttctgta gccggtggat atgctggaag tttagcaaaa
     7081 acagcaggac aaacaatagc caaaaaagct ttaaattatt tcgcaccatc tgcaattggt
     7141 gctggaagcg gtgccgtatc ggatcttcat tcacaaagta acaatacagg aattgaagta
     7201 agttatatgg actatgctaa aaggtttgga agtgcagccg cagaagatgc cttagcaggt
     7261 gctgtagttg gatcagctat aaagggaata ggaaaaacat ataaaagtgt tggtgattta
     7321 ataagcagtg ttaaaacagg agcacaagcc ggtaaagata tgatagatgg catggcggta
     7381 aaaggtggta atttaggtaa tagggttata gataaaatca cccaaaaaga tattcctatg
     7441 ataggaaaat ttacagatgg tggcttgcaa aatgcagaaa caatttttaa taatcttaca
     7501 aaaaatgtag agaataaaaa acaaatagat gaacttatag caaaagaaaa tccaacatac
     7561 ttagaaaatg gaaagcctac aatagaaata ttaaaaaact ttgtcgagca aggacttaac
     7621 aagaataatc cacaatttat acaagatagc gctaaaagaa caagtgctat tttaaaaaat
     7681 atttctaatg ctttacaagg agttccaact actcaaagaa gagaaatatt attaaaatca
     7741 gctcaagctt atcccgaaat aggaagtttt ttagatgatg ttttgaagtc tgataaggat
     7801 gctagtattt cttttttaaa tataattaaa gaacaagatg aagtatttaa gaacaaaaca
     7861 ggtttaaatg gcgagtttga ttataaagct tggcaaaaag ataatagctc ttataaaaaa
     7921 agaattaata atgaatatgc tcaagctata aaaagtatag atgagcttaa caacggctca
     7981 ataaggttaa gcaaagaagg tttagcaaag attgaagagt ttaaaaacaa caatttttta
     8041 gagcaagata taaaaacaaa tattagtagc tttctagaag atgctattga taaagactta
     8101 agtgctgagc aaatatttaa cttaagaagt gctataaata agcaattagc cacaggaaat
     8161 aagacatata atactaaaga agcttatagg ctagtaaaag atactttaga tgaaactatg
     8221 ataaaaaatg caagtgataa agaactagca aagaagattt tagaagatgc taataaaaac
     8281 tatgcgttaa aagaaaattt taataatagt tatctaggaa aaatcaaaga ccaagaaaca
     8341 cccgaagcac tcgcacaaag aatagctaat ggtgctagaa atatcaatga agacaaagat
     8401 ttaaaaagag cttttgaagg tatgaatgaa gcagagcgaa aagcaaatga aaaacatgct
     8461 tttaatgcat tactagcaaa acatagaatt gaagatatag gatatgattt taagaaccta
     8521 gcaaaagata tggataatgt agaatttgta agtaaagatt taaaatatgc aaaagaagta
     8581 gtaaatgttt atgcaaaaat ttatcaaaac aataaagact taataatgac ggctttagct
     8641 agtagtggca aaaaaacaaa ttcttcaata gccacaacaa tacagggtgt ttttgataga
     8701 atattaataa gtggtatttt agctagattg cacgccttag ttccttttgt aaaaagtgct
     8761 aaagaacaag cgttaagaaa tcaaatacta gatgcattaa aacttgctaa aaccaataaa
     8821 gaagttatat ctaatcttaa aaacataaaa atagcggata aagaacaaag tagaattttt
     8881 aaagatgctt tggataatta tattaaagta gataaagaac aaaataaaat attaaaagat
     8941 gcgctaataa aagaaggtgt tatcaaaggc gacaacttct tcatggataa agctgatccg
     9001 agcaaagcaa agagtgattt aaatgtaaaa ataagcgttt ctccaaatgt tagaaatttg
     9061 gcaaagctta caaatgatga gattatagct gacttagaat atttagccaa taaacataaa
     9121 gagatgttta aaaagcctag tgatgtgttt aagcttataa aagaaattaa agaaaatcct
     9181 acattttttt ataaaaataa tagaatggat atagctttaa tagcaaaaag attaaatgat
     9241 aataaattag gaaaacttgg tgtaaataaa gatactggag aagttaggca tattactaaa
     9301 tctagaaatg ctgacaaaga aaatgaaaga attataaaaa gagatggcaa aaaccctttg
     9361 gtagagtcgc catactctac acagcccgta ttgtcaaaag acgcagagcc aacggcgaat
     9421 ggtgctaatg cactttcaaa gggtaataat cctaattcta cccaaactaa gcctaaaaaa
     9481 aacttaatgg aagatataaa agaaaatatt gaggctaaag aagtagagaa aaagaataaa
     9541 aaaagcgtaa aacaaaggct tgatgaaaaa atacaagatg ataaaaaagc tagagaagaa
     9601 agaattaaga aaataaaaca agttatagct agaaagcaaa aaatagataa ggttacagat
     9661 aaaaaaaata acaggtaaat agcaggaaaa ataggcactt atacgctaaa aaatcttatt
     9721 aaattaaaag aaaggagcga agataaataa aaattaaggg ttttatccct taattttatt
     9781 acaattgctt caatcttcaa actatttctt aatattaata ggaaaagata aagaaaatgt
     9841 aaattaattt ttaggtttgt tttttataga atcaattatt ttaggtaaaa gtgtcaatgc
     9901 tcctaatata aaagcaaaat aagcaccttc attatgccca ttaagaataa gatataatcc
     9961 aacacatata ctagtaatag ttataagtag aaaagatacc attccaaaac cattccaaaa
    10021 atgataagat tttatatctt tttttctaat ttctatattt ttattctcta aatctagtat
    10081 tttattatcg ttatcttttt tatactctaa agatttctct agcattgtca caattctatc
    10141 tgctaaatct ttaggcaatt ttcctatagc attaagttca ttctccataa gaaaattaag
    10201 ctgagtattg aaagtttgag atggattttc tttattttga ttttcttgtt taatagtatt
    10261 aggtgttttt tgtttttgtg attttttcaa tttgtttctc tctaaattca atattctctt
    10321 tatataattt tgcttgtttt tctcttataa tagcatttaa atcccataaa ttaaagcatt
    10381 cgttttttat aggcttacct acaaaaccat ctacaaaagc ttgtgttttt gtcattttgg
    10441 ttttccttat ttttgttttg taattttttc aaatttggcg ttatactctt cattgctatg
    10501 ttttcttaat tcttctgatt ttttatgaaa atcacttatc attgtttttc tgtcttttaa
    10561 agatgtagct ttaaggatat ctgcattaaa catatttgta aagccaaata aaaaagcatt
    10621 tatgtttaac atttttactc cttaaaattc tt
//
LOCUS       DAQUWA010000059        10264 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.059, whole genome shotgun sequence.
ACCESSION   DAQUWA010000059 DAQUWA010000000
VERSION     DAQUWA010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10264
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.059"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            19..438
                     /locus_tag="R8X70_001417"
     CDS             19..438
                     /locus_tag="R8X70_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEF2929180.1"
                     /translation="MDENLIIDKILNNTKTIAIVGLSPDESKPSFMIGQFLQENHYKI
                     YPIYPKCDEILGERVYRSLDDIDEKIDLVLMFRKGEFASSLLPSIIRKGIQNFWLQLG
                     ICNNEVAKECENLKINFIQDKCIMRELPLYQDRISKC"
     gene            432..1643
                     /locus_tag="R8X70_001418"
     CDS             432..1643
                     /locus_tag="R8X70_001418"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HEF2929181.1"
                     /translation="MLELNKIYQAKQKIADFVSKTPFIHSSFLSELCKSEVYLKNENL
                     QITGAYKIRGAYNKIANLDPEAKKAGVIAASAGNHAQGVAISAKKFGTKAIIVMPEST
                     PLLKVSATKSLGAEVILKGDNFDEAYAFATNYAKENGLSFIHPFEDELVMAGQGTLML
                     EMLDDVSDLDTIIAPVGGGGLISGIASAAKQINPNIKIIAVGAKGAPAMHDSFKAKEV
                     KNSKSVRTIADGIAVRDANPINLGIILECVDEFVQVDDEEIANAVLFLLEKHKIIVEG
                     AGAASVAALLHQKIDIKDSKKIGVVLSGGNIDVQMLNIIIEKGLFKAYRKMQINVTLI
                     DKPGALLNLTDSLKSANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEVRNIL
                     KDKGFDFYETF"
     gene            complement(1640..2365)
                     /gene="truA"
                     /locus_tag="R8X70_001419"
     CDS             complement(1640..2365)
                     /gene="truA"
                     /locus_tag="R8X70_001419"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEF2929182.1"
                     /translation="MMKLKIIFSYDGSKFLGSATQPHKKSVQDALQDALSHLGIFSSV
                     LMASRTDKGVHASYAVACVECGEHFRDLNYLKKQINKFSHPFIHVKNLKIMPSNFEVR
                     YDVKSREYRYIFYHGVYNPFLASYVHFYPFIDVLKADLVLQNFVGIKDFKFFCKSGGD
                     NKTTIREIFLAKAYSYKDFTIFRFKANGFLRAQIRLMVASVLKVLENKMSIEELKEQI
                     EAKKQYNHFLAPPCGLYLSRISY"
     gene            complement(2362..3387)
                     /locus_tag="R8X70_001420"
     CDS             complement(2362..3387)
                     /locus_tag="R8X70_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEF2929183.1"
                     /translation="MKLALRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIEI
                     NFADLLKLYGFMLPRILIFTLPIVFFIALTLALFRLSRENESIVLFTLGFSPKILAKF
                     FLKIAALVSALMLIIALVMIPIVFELQDNFVNFKKTQVKFNYKTGEFGQRFLEWMIFI
                     EKQESDRYENIIMYHPKRNIEDKEQLIIAKEATAQRNEDSFAFKLSNGKMYNFENGQT
                     LFIGNFDKLIVNTQFNDQNLQTKKFYEYWNDLNTNPKRAKEFVIYVTIALFPLASTLF
                     ALSFGIVTYRYEKGFIYFGMFGVIAVYFGLLSSFSQPPILACIGIFALSFIASIVCFK
                     KMILSRY"
     gene            complement(3384..4163)
                     /locus_tag="R8X70_001421"
     CDS             complement(3384..4163)
                     /locus_tag="R8X70_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEF2929184.1"
                     /translation="MENNPIAFLILAILGASLGSFCMSLTMRFCENKPLLSLRSYCFS
                     CYQKLKPLELIPIFSYIFLRFKCKTCHIKIPFSVFLAEVLGMIFAWIAYLLSQNIGEF
                     IHLLIFLFVLFALSCIDLKFQAVPQKLLWLIFFIAFSFAFNSNEFAYFFIFENFQNGF
                     MVQAFIFAGFLFLLKNFIAFLKNFRTKDIQENLGDADIIILASMAGVFGFKSAFIILF
                     LASLLSLPFFIHNKNTKLAFLPFINAAFVIYLIYLIVQELI"
     gene            complement(4153..4821)
                     /gene="uppS"
                     /locus_tag="R8X70_001422"
     CDS             complement(4153..4821)
                     /gene="uppS"
                     /locus_tag="R8X70_001422"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HEF2929185.1"
                     /translation="MNELKHLAVVMDGNRRWAKAKGFLAKLGYSQGVKTMQKLMEACV
                     EEGISNLSLFAFSTENWNRPQDEIEFIFELLDRCLDEALKEFEKNNVRLRAIGDLSRL
                     DTHLQEKIALVEEKTKHCDLLCVNLAISYGAKDEIVRSVKRLIEKGLEINEKNISDNL
                     DLPLDVDLMLRVGNAKRLSNFLLWQCAYAEIYFSETLFPSLTKREFKKIIKEFRKRER
                     TFGK"
     gene            complement(4824..5441)
                     /locus_tag="R8X70_001423"
     CDS             complement(4824..5441)
                     /locus_tag="R8X70_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929186.1"
                     /translation="MNMINSTLPIQMKVLAKSGYAHYTLLLNHRKIQTKSMIELEIGA
                     EYLAELYIEKGGAIAFKHLSKRPDFHPFEEGLSLMVEILEGRIDYKKYIISNLLECKD
                     KNKYHILKEMLFASFENIYHIPFIFKGKACLFQMKKRVKFLEIYLYFSVFGALKILID
                     EGGISIFTPFFKVQKFLNEHLQFNVLQDKNIQPLFVFKKLFDFKG"
     gene            complement(5438..6592)
                     /gene="coaBC"
                     /locus_tag="R8X70_001424"
     CDS             complement(5438..6592)
                     /gene="coaBC"
                     /locus_tag="R8X70_001424"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEF2929187.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFAS
                     KMSFEALVDEVLCEENESWQNSNNHIAFSKDADLVLFAPASVNSINKLAFGIADNLFI
                     QTLIAANKPLIIAPAANTNMFHHFSTQNSLKILKENKALIIEPICKVLACKDEGIGAL
                     AEVKDIFNISKRELFKQSFWCDKEVVISGGGTKEKIDNVRCVSNFSSGKMAKAIADAF
                     YFLGAKVTLLSSVYFDTPYSLKSFESSRELKELLEQNSNKDYLIMAAAVSDFIPEFKK
                     GKIKKNEHLKGLNLHLRLNEDLLKNLNFKGKKIGFKMEFDAQNALENAKKSLNDKKLD
                     MVCLNILEEENYFGSSKNEIHFITVNKIEKSGLKSKEDLAFDLVSWCEKI"
     gene            complement(6589..7878)
                     /gene="glmU"
                     /locus_tag="R8X70_001425"
     CDS             complement(6589..7878)
                     /gene="glmU"
                     /locus_tag="R8X70_001425"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEF2929188.1"
                     /translation="MKTSILILAAGLGTRMKSEKPKVLQELCQKSMILHILEKAFAIS
                     EDVSVVLSHQKERVEKEILKHFPKTQILEQDLINFPGTAGALKEFRPKNEKVLILCGD
                     MPLVEQTSLEALLSNNAKLNLAVFKARDPKSYGRVVIKNDSVEKIVEFKDANTQEKEI
                     NTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFM
                     GINDKFELSIAENFMQEKIKKYWMQQGVIFHLPQSTFIGADVEFVGECEVYENVRIEG
                     KSKIINSIIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFIECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSVNVEKGALFINRAGHKMIKDYYYKKFQK"
     gene            8028..8762
                     /gene="fliP"
                     /locus_tag="R8X70_001426"
     CDS             8028..8762
                     /gene="fliP"
                     /locus_tag="R8X70_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HEF2929189.1"
                     /translation="MLTLLFISGFFSVIFAAEATIPTVNLSLSAPDTPNQLVTTLNIV
                     IVLTILALAPSIIFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEQIGYEEAFARGVKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPVMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            complement(8759..8983)
                     /locus_tag="R8X70_001427"
     CDS             complement(8759..8983)
                     /locus_tag="R8X70_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929190.1"
                     /translation="MLEFIFTLILDFTFYSIKTLEKVFLGRTALVILFVVFIALFCVK
                     GLFLYILLALELFLLLYLFLGILFLRFYKS"
     gene            complement(9003..9236)
                     /locus_tag="R8X70_001428"
     CDS             complement(9003..9236)
                     /locus_tag="R8X70_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929191.1"
                     /translation="MKKVAFFLLFLFLSCTVLNAAREYCKYAYQEDRAIPLILNYGIR
                     LGVVGAGVANVPAPGGSTYNSKIDMMAARCHQA"
     gene            complement(9329..10099)
                     /locus_tag="R8X70_001429"
     CDS             complement(9329..10099)
                     /locus_tag="R8X70_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEF2929192.1"
                     /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGI
                     SVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKVVDFSIPY
                     AKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALKDK
                     LDNFIDESRKNGFLDFLGNKYLKDIKEVFKQNNITFFL"
BASE COUNT         3632 a         1814 c         1368 g         3450 t
ORIGIN      
        1 ttatataaag taacaacgat ggatgaaaat ttaatcatag ataaaatact caacaacaca
       61 aaaaccattg ccatagtagg acttagcccc gatgaaagca agccttcttt tatgatagga
      121 caatttttac aagaaaatca ttataaaatt tatcctatat atcctaaatg tgatgaaatt
      181 ttaggagaac gcgtttatcg aagcttagat gatatcgatg aaaaaataga tcttgtttta
      241 atgtttcgca agggcgaatt tgcctcttca ttactcccaa gtattatccg taaaggaatt
      301 caaaattttt ggctgcagct tggaatttgc aacaatgaag ttgctaaaga atgcgaaaat
      361 ttaaagatta attttataca ggataaatgc attatgcgtg aattgccact ttatcaagat
      421 aggataagca aatgttagaa ctgaacaaaa tttatcaagc caaacaaaaa attgctgatt
      481 ttgtaagcaa aactcctttt atacactctt cttttttaag cgaactttgc aaaagtgaag
      541 tgtatttaaa aaatgaaaat ttgcaaatta caggagctta taaaattcgc ggtgcatata
      601 acaaaatagc taatttagac ccagaagcta aaaaagcagg agttatagct gctagtgctg
      661 gaaatcacgc tcaaggtgtt gccataagtg caaagaaatt tggcacaaaa gctataatcg
      721 tgatgccaga atccacccct ctcttaaaag tttctgctac caaaagcttg ggtgcagaag
      781 ttattttaaa aggtgataat tttgacgaag cttatgcttt tgcaacaaac tatgcgaaag
      841 aaaatggatt aagttttatt catccttttg aagatgaact tgtaatggca ggacaaggca
      901 cacttatgct tgaaatgctt gatgatgtaa gcgatcttga taccatcata gctcctgtag
      961 gcggtggtgg acttattagc ggtatagcaa gcgctgcaaa gcagattaat cccaatatca
     1021 aaattattgc agtaggtgct aaaggagctc ctgcaatgca tgatagcttt aaagcaaaag
     1081 aggttaaaaa ctctaaaagt gtccgtacta tagcagatgg tattgctgtg cgcgatgcta
     1141 atcctattaa cctaggtatc atccttgaat gcgtggatga atttgttcaa gtagacgatg
     1201 aagaaatcgc taatgcggta ttgtttttgc ttgaaaaaca taaaattata gttgaaggcg
     1261 caggtgctgc aagcgtagcc gccctacttc atcaaaaaat agatataaaa gattctaaaa
     1321 aaatcggcgt tgttttaagt ggcggcaata tcgatgtgca aatgctaaat atcatcatag
     1381 aaaagggtct ttttaaagct tatcgtaaaa tgcaaatcaa tgttacttta atcgataaac
     1441 caggagccct acttaatctt acagatagct taaaatcagc caatgcaaac atagtcaaaa
     1501 ttgattatga tagattttca acaaagcttg attatggcga tgctatgatt tctattacct
     1561 tagaaactaa aggcaaagaa catcaagaag aagttagaaa tatcttaaaa gataaaggtt
     1621 ttgattttta cgaaactttc taataagaaa ttctactcag ataaagtcca caaggcgggg
     1681 ctaaaaaatg attgtattgt tttttagctt cgatttgctc ttttaactct tctatactca
     1741 tcttattttc taaaactttt aaaacactcg caaccattag tcttatttgc gcccttaaaa
     1801 aaccattagc cttaaaacga aaaatggtaa aatccttata agaatacgct ttagctaaaa
     1861 atatttctct gatagtcgtt ttattatctc ctccgctctt gcaaaagaat ttaaaatcct
     1921 taatacctac aaaattttgc aaaacaagat cagcctttaa aacatcaata aaaggataaa
     1981 aatgaacata agaagctaaa aaaggattat aaaccccgtg ataaaaaata tagcgatatt
     2041 ctctactttt tacatcgtat cttacttcaa aatttgaagg catgattttt aaatttttaa
     2101 catgtataaa aggatgagaa aatttattga tttgtttttt aagatagttt aaatccctaa
     2161 aatgctcccc gcattccacg caagcaacag catagcttgc atgcacccct ttatctgtgc
     2221 gagaagccat caaaacagag gaaaaaattc caagatgact taaggcatct tgcaaggcat
     2281 cttgaacgct ttttttgtga ggttgggtag ctgaacctaa aaatttcgat ccatcatagg
     2341 aaaaaataat ttttaatttc atcaataacg actcaaaatc atctttttaa aacaaacaat
     2401 agacgcaata aaacttaaag caaatattcc aatacaagct aaaataggag gctgtgaaaa
     2461 agaacttaaa agcccaaaat acacagcaat aaccccaaac atcccaaaat aaataaaacc
     2521 tttttcataa cgataagtta ctataccaaa agaaagggca aaaagcgtac ttgcgagtgg
     2581 aaataatgct atggttacat agattacaaa ttctttcgcg cgtttgggat ttgtatttaa
     2641 atcattccaa tactcataaa attttttagt ttgtaaattt tgatcattaa attgtgtatt
     2701 gactataagc ttatcaaaat ttccaataaa aagcgtttgg ccattttcaa aattatacat
     2761 tttgccatta gaaagcttaa aagcaaagct gtcttcattt ctttgtgctg ttgcttcttt
     2821 tgcgataatc aattgctctt tgtcttctat attgcgtttt ggatgataca tgatgatatt
     2881 ttcatatctg tcactttctt gcttctcaat aaaaatcatc cattcaagaa atctttgtcc
     2941 aaattcaccc gttttataat taaatttaac ctgagttttt ttaaaattaa caaaattatc
     3001 ttgcaattca aacactatag gtatcataac caaagctata attaacatca atgcacttac
     3061 taaagcggcg atttttaaaa aaaacttagc taaaatttta ggtgaaaatc ccaaggtaaa
     3121 taacactatg ctttcattct ctctagaaag cctaaaaaga gccaaagtaa gagcgataaa
     3181 aaaaactata ggcagggtaa aaataagaat tctaggcagc ataaagccgt ataatttaag
     3241 caaatctgca aaattaatct ctatactaga agtaagctta gcaagttgta taaaaaaaac
     3301 catagaaact atagtaaaaa gcacaaaaaa aatcgataaa tttgtactta aaaattgatt
     3361 taaaacatat cttaaagcaa gtttcatatt aattcctgaa caatcaaata tatcaaatat
     3421 atcacaaaag cagcattgat aaagggtaaa aatgctagtt ttgtattttt attatggata
     3481 aaaaagggta aagacaataa cgaagcaaga aaaagaatta taaaagcact cttaaaacca
     3541 aatacccctg ccatactagc aaggataata atatccgcat cacctaaatt ttcttgtatg
     3601 tcttttgttc taaaattttt taaaaatgct ataaaatttt taagtaaaaa caaaaaacca
     3661 gcaaaaataa aagcttgaac cataaatcca ttttgaaaat tttcaaatat aaaaaaatac
     3721 gcaaattcat tgctattaaa agcaaaagaa aatgcaataa aaaaaatcaa ccaaagcaat
     3781 ttttgaggca cagcttgaaa ttttaaatct atgcaagaga gtgcaaataa aacaaataga
     3841 aaaatcagta aatggataaa ttcccctata ttttggctta gcaaataagc aatccatgca
     3901 aaaatcatcc ccaaaacttc agccaaaaaa acagaaaaag gaattttaat atgacaagtt
     3961 ttgcacttaa agcgaagaaa aatataagaa aaaatgggta ttaattccaa aggcttaagt
     4021 ttttgatagc aagaaaagca ataagaacgc aagcttaata agggcttgtt ttcacaaaaa
     4081 cgcattgtta agctcataca aaatgaaccc aagctcgctc ctaaaatagc taaaatcaaa
     4141 aaagctatgg gattattttc caaaagttct ctctcttttt ctaaattctt ttataatttt
     4201 tttaaattct ctttttgtaa gagaaggaaa taaggtttcg ctaaaataaa tttctgcata
     4261 agcacattgc caaagcaaga aattagacaa tcttttagca tttcccacac gaagcatcaa
     4321 atccacatcc aaaggcaaat ctaaattatc gcttatgttt ttttcattga tttccaagcc
     4381 tttttcaatc aagcgtttaa ccgaacgcac gatttcatct tttgctccat aactgatagc
     4441 taaattcaca caaagcaaat cacagtgctt ggttttttct tccacaaggg ctattttttc
     4501 ttgtaaatgt gtatcaagtc ttgataaatc cccgatagct cttaatctta cattgttttt
     4561 ttcaaattct tttaaggctt cgtccaaaca acgatccaaa agctcaaaaa taaattcaat
     4621 ctcatcttga ggtctgttcc aattttccgt gctaaaagca aaaaggctta aatttgaaat
     4681 tccctcctct acacaagctt ccatcagctt ttgcatggtt ttaacacctt gagaatatcc
     4741 aagcttagct aaaaaacctt ttgccttagc ccaacgccta ttgccatcca ttacaacagc
     4801 aagatgtttt aattcattca ttatcaccct ttaaaatcaa ataatttttt aaatacaaat
     4861 aaaggttgta tatttttatc ttgcaaaaca ttaaattgca agtgctcgtt taaaaatttt
     4921 tgcaccttaa aaaagggggt aaatatcgaa attccaccct catcgatcag aattttcaaa
     4981 gctccaaaaa cgctaaaata aagataaatt tctaaaaatt taaccctttt tttcatctga
     5041 aacaaacaag ccttaccctt aaagataaaa gggatatgat aaatattttc aaaacttgca
     5101 aaaagcattt cttttaaaat atgatattta tttttatctt tgcactctaa aagatttgaa
     5161 ataatatatt ttttataatc aatcctaccc tctaaaattt caaccatcaa agataatccc
     5221 tcttcaaagg gatgaaaatc aggcctttta gataaatgct taaatgcgat cgcgccgcct
     5281 ttttctatat aaagctcggc taaatactca gctccaattt ctaattctat catgcttttg
     5341 gtttgaattt ttctatgatt gagcaaaagt gtgtagtgtg catagcctga ttttgctaaa
     5401 actttcattt gtataggtag ggttgagttt atcatattca tattttttca caccaagaaa
     5461 ccaaatcaaa agccaaatct tccttgcttt ttaaaccgct tttttctatc ttatttactg
     5521 taataaaatg aatttcattc ttagaacttc caaaataatt ttcctcttct aagatattta
     5581 aacaaaccat atcaagtttt ttatcattaa gcgatttttt cgcattttct aaagcatttt
     5641 gagcgtcaaa ttccatctta aagcctattt ttttaccttt aaaatttaaa tttttaagca
     5701 aatcctcatt taatcttaaa tgcaaattta aaccctttaa atgctcattt tttttgattt
     5761 tgcctttttt aaattcaggt ataaagtcac ttacagctgc cgccatgatt aaataatctt
     5821 tgtttgaatt ttgctctagc aattctttta attctcgcga gctttcaaaa ctcttaagag
     5881 aataaggagt atcaaaataa accgaactca aaagcgttac tttagccccc aaaaaataaa
     5941 acgcatcagc gattgccttt gccatttttc cacttgaaaa attactcaca caacgcacat
     6001 tatcaatctt ttcttttgtc cccccaccac taatgacaac ttctttatca caccaaaatg
     6061 attgcttgaa aagctctctt ttgcttatat taaagatatc ttttacttca gccaaagctc
     6121 cgataccttc atctttacaa gctaaaactt tacaaatagg ctctataatc aaagctttat
     6181 tttctttaag tatctttaaa gaattttgcg tgctaaaatg atgaaacata tttgtatttg
     6241 ccgcaggagc tatgataaga ggtttatttg ctgcgattaa agtttggata aaaagattat
     6301 ccgctatacc aaaagcaagt ttattgatag aattaacact tgcaggggca aacaaaacaa
     6361 gatctgcatc cttgctaaaa gctatgtgat tgtttgagtt ttgccaactt tcattttcct
     6421 cgcataaaac ttcatcaacc aaggcttcaa aactcatttt gctagcaaat tttaacaaac
     6481 cattagaaag caaaactttt accctaaagc cttctttttt aaacaaagaa ataagctcat
     6541 aagatttata aaaagctata ctaccgctaa tggctaaaag tatggttttc atttttgaaa
     6601 tttcttataa taataatctt ttatcatttt atgccctgct ctattgataa acaaagcacc
     6661 cttttctaca ttgacactta ctgtgcttcc tgctgctatg atcacttcat cttcgatttt
     6721 tacaggtgcg ataaattgtg tatccgaacc tacaaaaaca ttttttccta taatggtttt
     6781 atgctttttt accccatcat aattacaagt gatagtccca cagcctatat tagttccact
     6841 atctatctca caatctccta aataactcaa atgccctgct tttacggtat ttaacttcgc
     6901 atttttgcat tctataaaat ttcctatatg agtgtttttt aactcacaat ttggacgcaa
     6961 atgtgccaaa ggccctacat cgctattttc tacgatggaa ttttctatca cgcttgaact
     7021 tttaatgata gagtttataa tcttactttt gccctctatc cttacatttt catatacttc
     7081 acattcacct acaaattcaa catctgcacc tataaaagtg ctttgcggta aatgaaaaat
     7141 cacaccctgt tgcatccagt attttttaat tttttcttgc atgaaatttt cagctatact
     7201 gagttcaaat ttatcattaa tccccataaa ttcatcttca tctacaaaaa ctgctttaat
     7261 catcacatct ttttcttttg ctagttttac aatgtcggtt aaataatact cttttgccgc
     7321 attattgtta tcaatcaaag gtaaaagctc ttttaaaagt ctcgagtcaa tcacataaac
     7381 cccagcattg caagtattta tctctttttc ttgcgtattt gcatctttaa attcaacaat
     7441 tttttcaacg ctatcgtttt ttatcaccac cctaccataa cttttaggat ctcttgcttt
     7501 aaaaactgct agatttaatt ttgcattatt actcaacaaa gcttccaaac ttgtttgctc
     7561 aaccaaaggc atatccccgc aaagaattaa aactttttca tttttaggcc taaattcctt
     7621 taaagcgccc gcagtgcctg ggaaattgat caaatcttgt tctaaaattt gcgttttagg
     7681 aaaatgtttt aaaatttctt tttcaacgcg ttctttttga tgagataaaa ccacgctcac
     7741 atcttcactt atagcaaaag ctttctctaa gatatgtaaa atcatgcttt tttgacacag
     7801 ctcttgcaat acctttggtt tttcagattt cattcttgtt ccaagtcctg ctgctaaaat
     7861 caaaatggaa gttttcatta taaaaagcct tttgaggata attttatttt aattttaaca
     7921 ttttaaagtt aaatttttct ctaaattaaa acaagttaaa ctctttttta gtgagtaaaa
     7981 gttaaaatta agtttcattt tttaatcaag gtttattttt gaaaaaaatt ttaacattat
     8041 tgtttatcag cggttttttt agtgttattt tcgctgccga agcaacaatt cctacagtaa
     8101 atttaagcct aagtgctcct gatactccta atcaacttgt tacaacatta aacatagtca
     8161 tagtcttaac catacttgca ttagctccaa gtataatttt tgttatgact tcttttttac
     8221 gcttgattgt agttttttca ttcttgcgtc aagctatggg aactcaaagt atgccgccta
     8281 ataccatctt agtaaccttg gcattgattt taaccttttt tataatggag cctgtggcta
     8341 caaagtctta taatgaaggc atcaagcctt atttagcaga gcaaataggc tatgaagaag
     8401 cttttgcaag aggtgtgaaa ccttttaaag attttatgct taaaaataca cgcgaaaaag
     8461 acttagcttt attttaccgc atacgaaacc tgcctaatcc taaaaccata gatgatgttc
     8521 cacttacggt tttagttcct gcttttatga tttcagaact taaaactgct tttgagatag
     8581 gctttttgat ttatttgcca tttttggtta tcgatatggt tgtgagttcg gttttgatgg
     8641 cgatggggat gatgatgctt cctcctgtta tgatttcatt gccttttaaa cttttgattt
     8701 ttgtattagt ggatggatgg aatttgctag tgcaaaggct tgtggaaagc tttgtaacct
     8761 aagatttata aaatcttaaa aacaaaattc caagaaaaag atacaaaagc aaaaataatt
     8821 ctaaagctaa aagtatatac aaaaacaagc ctttaacgca aaaaagagct ataaaaacaa
     8881 caaaaagaat tactaaggct gttcgcccta gaaagacttt ttctagggtc ttgatagaat
     8941 aaaaagtaaa atctaaaata agagtaaaaa taaattctag cattgtaaaa tacacccaaa
     9001 aactaagctt ggtggcatct tgcagccatc atgtcaattt ttgagttgta agtacttccg
     9061 cccggtgcag gtacattcgc aaccccagca cctactaccc ccaatcttat tccataattt
     9121 aaaattaaag gtatagctct atcttcttga taagcatatt tgcaatactc cctagctgcg
     9181 tttagtacag tgcaagataa aaacaaaaat aacaaaaaaa atgcaacttt tttcattatc
     9241 ttaaatcctt ttatttaaaa tttagataat gatattgtat atcaaaattt ataaaattaa
     9301 tattaattat caatatttta ttaaaagcct acaagaaaaa agtgatatta ttttgcttaa
     9361 aaacttcttt aatgtctttt aaatacttat tgcccaaaaa atctaaaaag ccatttttcc
     9421 tactctcatc aatgaaatta tcaagcttgt cctttaaagc ttcatcacct tttcttacag
     9481 ctatacccca aaactcagga ttttcttgaa aaggcgctaa aatggctctg gttgtatctt
     9541 gatgcttttg ccaagtccga taaatcgtaa gttgatcata aaaaaatcca tcagccttgc
     9601 cttgaatcac ttccaaaata gcagcatttt ctttatcgaa taaattaata gttgcatttt
     9661 ttaaattttt aaccgcatat aaatgccctg tagaaccacg ctttaaagcc aaaactttgc
     9721 cctttttatc taaatctttg atatttgtaa tatcagagtt caaaggagtt aaaatagcca
     9781 aatttgcctt agcataagga atgctaaaat ccaccacttt ctttctctca tcggtaattg
     9841 tcatagagga cataataaga tctatcttgg ctgtttttaa agcaggtatt aaaccatccc
     9901 aagcgatatt ttttactaca agtttatagc cgtttttctt tgcaaaagct tctaaaaaat
     9961 ccacgctaat tccacttgct ttgcctgttt tatcgctcat ttcaaaaggc ggatatccaa
    10021 gctccattcc tacaaccaaa tcttttgcac tcaaatttaa agcaaaaaaa gagataaaaa
    10081 tcaaaataat ttttttcata atttcctttc aaattttttt gtaaaaaaat tatactaatt
    10141 ttatcttatt ttattattag caatttattt caaacttaaa aaattaatac ttcctaaacc
    10201 ctagtttgtc ccaaaagatt attaagtcta tccattatag atccaacata agaatttata
    10261 cttt
//
LOCUS       DAQUWA010000060        10239 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.060, whole genome shotgun sequence.
ACCESSION   DAQUWA010000060 DAQUWA010000000
VERSION     DAQUWA010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10239
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.060"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(141..1139)
                     /gene="mnmH"
                     /locus_tag="R8X70_001430"
     CDS             complement(141..1139)
                     /gene="mnmH"
                     /locus_tag="R8X70_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HEF2929193.1"
                     /translation="MLSEVEFTEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDE
                     EYQEIGTIYKKNQALAKARGASYICQNMSKHILELTQKFRIGDKIGIYCSRGGLRSKS
                     IAVILSELGYRVVRLKGGFKAYRSFLAHYFDNEINLDFFALCGNTGCGKTELLELLPH
                     HLNLEKMANHLGSSFGDILGTQPTQKAFEASLFHTLNSLKDFIFIESESRKIGEIVLP
                     LKLYEKMQKAFKIHCFCSLEKRIDRIQKIYQEKMTPLKFKECLAKISPYISVNLRQDL
                     LKSYEQREWQRLIALLLAYYDKSYKKPQKIDFELNTDDIFKAKEELLGYFKTQLLF"
     gene            complement(1129..1614)
                     /locus_tag="R8X70_001431"
     CDS             complement(1129..1614)
                     /locus_tag="R8X70_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEF2929194.1"
                     /translation="MQYLYAPWRSEYFEKEKSVCPFCDCANKIKSDEELGVIFRAKHC
                     FGVMNRYPYSAGHFMVIPYVHEEHIENLSDEIWQEMSHFVRLGVKILKEQIHANGVNI
                     GMNLSKDAGAGIAFHCHYHLVPRWAGDTNFITTIGETRVCGANIEQVYQKLVLAFKNA
                     Q"
     gene            complement(1624..2400)
                     /gene="trpC"
                     /locus_tag="R8X70_001432"
     CDS             complement(1624..2400)
                     /gene="trpC"
                     /locus_tag="R8X70_001432"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEF2929195.1"
                     /translation="MILDKIFEKTKEDLKERKAQLPYDMLGRSLASNPFFPKDVKAAL
                     KRIENEVRIIAEVKKASPSKGVIRENFDPLDIALKYEKNGAAAISVLTEPHFFQGSLE
                     YLSMIRRYTHAPLLRKDFIFDEYQILEALVYGADFVLLIARMLSMKELKRLLEFTRHL
                     GLEALVEIHDKEDLSKAIFSGADIIGINHRNLDDFSMDMNLCEKLIPQIPNSKIIIAE
                     SGLEDKDFLRHLQNLGVDAFLIGEYFMREKDEGKALKALL"
     gene            complement(2397..3674)
                     /locus_tag="R8X70_001433"
     CDS             complement(2397..3674)
                     /locus_tag="R8X70_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HEF2929196.1"
                     /translation="MYRNLLFVLIGFFLTACGASKTIIAYPDYKQQKSNKFDLRIMKA
                     YNYEYFNQYEEARDEFLALFRDYNITNFLENAFLLTLANNLDKKEEINNIAKPYLDKS
                     DNLKRLSALYALNSYNLKEAQELIQGLLKKKSDDPRNLELYGDVLIRQNNLKDAIKYY
                     QLAYNQVQNEEILFKLVGVYAILNDTSSIKNILENSKNINGCTLKTCILLAKIYNDEG
                     NSKALQEIYIELYNITKNKSFILALVELLSSQNKDKEALHFALKYNADDDMKLYLYQR
                     LKLYNKAKDLSMQIYKRTQEKEYLLRAAVFEFEEANLNKKITPQVVALVSEKFSNAID
                     ESSDALYLNYYGYLLIDYDLDLKKGMKLVELALKKEPQNLYYLDSLAWGYYKQGDCKK
                     AWEILKQTLEDKEFANSDESKAHAKAIKACIKP"
     gene            complement(3647..4021)
                     /locus_tag="R8X70_001434"
     CDS             complement(3647..4021)
                     /locus_tag="R8X70_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEF2929197.1"
                     /translation="MIFNKDFSYGFNENACQECGGKCCTGESGNIFANKEELKALREH
                     LQLDEKEFALKYLKKVGFRMSFKEVEFEDGFACIFFDKEKRNCSIYDFRPKQCRTFPF
                     WEYFKTHQEELKKECIGICYLS"
     gene            complement(4011..4712)
                     /locus_tag="R8X70_001435"
     CDS             complement(4011..4712)
                     /locus_tag="R8X70_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEF2929198.1"
                     /translation="MQDSIKLAQLSDGYRYNSDSLLLADFVLEMGIKNQVLEVGSGCG
                     IIGILLKKFVSNLDLSLLDIQQENIELIHRNLKQNNIQAGVLHEDFRNFQNDKKFDFI
                     VCNPPFYRDGAHEGKNTHKNISKFQKYLTLNEFIVRSNALLKPMGVLYFCYEALALDK
                     ICLVLESKKLKLTKIRFVHTHQNISARLVLVQARKSVKSPCEILPPFFIYKNENLSEQ
                     MQEIHSRFRLESYDI"
     gene            complement(4715..4867)
                     /locus_tag="R8X70_001436"
     CDS             complement(4715..4867)
                     /locus_tag="R8X70_001436"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929199.1"
                     /translation="MLKFFFTISLSSLLFAQNFIDFASQNNALKQEQNTSKENTPLKR
                     IKIPTH"
     gene            complement(4918..4994)
                     /locus_tag="R8X70_001437"
     tRNA            complement(4918..4994)
                     /locus_tag="R8X70_001437"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4958..4960),aa:Arg,seq:cct)
     gene            complement(5023..7098)
                     /gene="fusA"
                     /locus_tag="R8X70_001438"
     CDS             complement(5023..7098)
                     /gene="fusA"
                     /locus_tag="R8X70_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEF2929200.1"
                     /translation="MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            complement(7111..7581)
                     /gene="rpsG"
                     /locus_tag="R8X70_001439"
     CDS             complement(7111..7581)
                     /gene="rpsG"
                     /locus_tag="R8X70_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEF2929201.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALELIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            complement(7651..8034)
                     /locus_tag="R8X70_001440"
     CDS             complement(7651..8034)
                     /locus_tag="R8X70_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEF2929202.1"
                     /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKASAK"
     gene            complement(8174..9613)
                     /gene="aldA"
                     /locus_tag="R8X70_001441"
     CDS             complement(8174..9613)
                     /gene="aldA"
                     /locus_tag="R8X70_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEF2929203.1"
                     /translation="MTTYLNYIDGKFIPHNGEFIEVLNPATKEVISRVASASLEDTKR
                     AIEAAKKAQKVWEAKPAIERANHLKEIASLIRKNANFLTEVLMQEQGKTRVLASIEIN
                     FTADYMDYTAEWARRYEGEIIQSDRANEHIYLYKSAIGVIGGILPWNFPFFLIARKMA
                     PALLTGNTIVIKPSSETPNNAFEFAKLVSQSSLPKGVFNLVAGKGSVVGYELSSNENI
                     GMVSLTGSVEAGTRVMEAAAKNIIKVSLELGGKAPAIVCKDADIDLAVEAIKASRICN
                     NGQVCNCAERAYVHTSIYDEFVDKFVKAMSKVSVGNTLKGDFDMGPLVNQAGVDNALA
                     MLQRATAKGAIVECGGKITDTSGYYFPASVLTNVKHEDEIMQKEIFAPILPIAKFDTL
                     DEAIDMANDCEYGLTSSIYTQNLDIAMRASREIKFGETYINRENFEAMQGFHAGFRKS
                     GIGGADGKHGLEEYLATHVVYLQYNTNKQ"
     gene            complement(9627..9944)
                     /locus_tag="R8X70_001442"
     CDS             complement(9627..9944)
                     /locus_tag="R8X70_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HEF2929204.1"
                     /translation="MQRYGQIIKIKKEKIEEYKNLHAKPYEGVCEMIKKCNMQNYSIY
                     LFGEYLFAYFEYVGADFEADMAKMARDESTQKWWKVTDPCQISLGYAGQKWLNMEEVF
                     HLD"
     gene            complement(9920..>10239)
                     /locus_tag="R8X70_001443"
     CDS             complement(9920..>10239)
                     /locus_tag="R8X70_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEF2929205.1"
                     /translation="RLNEYKKDLNLLKKFPNLYIKLSVPDDFSEQTSKEFIYELFAFF
                     KENFSEDKFIFGSNYPVAKIAPAKWAKLIIESKIFKNLNKIFYQNALSIYKEDRCKDM
                     AKS"
BASE COUNT         3240 a         2042 c         1322 g         3635 t
ORIGIN      
        1 tataattcaa atttactagc attaaaataa aaatttgggg ctaaaccaaa acaataaaaa
       61 agaattcttg caagataata aagaaaattt tgatgattta gtaaaagttt ttttaaatta
      121 aaagtagaaa ttatctagta ttaaaaaagc aattgcgttt taaaatagcc taaaagctct
      181 tctttggctt tgaagatatc atcagtgttt agctcaaaat ctattttttg tggcttttta
      241 taactcttat cataataagc caaaagcaag gcaataagcc tttgccattc tctttgctca
      301 taacttttta gcaaatcctg acgaagattt acactgatat aaggactgat cttagcaaga
      361 cattctttaa atttcaaagg agtcattttt tcttgataga tcttttgtat cctgtctatg
      421 cgcttttcta aagaacaaaa acaatgaatt ttaaatgctt tttgcatttt ttcataaagc
      481 tttaaaggca aaactatttc gcctatttta cgactttcac tctctataaa gataaaatct
      541 tttaaagaat ttaaagtatg aaaaaggctt gcttcaaaag ctttttgcgt aggttgagta
      601 cctaaaatat cgccaaaaga agagcctaga tgatttgcca ttttttctaa atttaaatga
      661 tggggtaaaa gctccaaaag ctctgttttt ccacagcctg tattaccaca aagagcaaaa
      721 aaatctaaat ttatttcatt atcaaaataa tgtgctaaaa aacttctata agctttaaag
      781 ccacccttta aacgcaccac tctatagcct aattcgctca aaatcactgc gatagatttt
      841 gaacgcaaac ccccacgaga acagtaaatt ccaatcttat ctcctatgcg gaatttttga
      901 gtaagctcta agatatgctt tgacatattt tgacaaatat aactcgcacc cctagcctta
      961 gctaaagctt gatttttctt ataaattgtt cctatttctt gatattcttc atcattgagt
     1021 gcataaaaat ttaaagctcc tatcaaatga gaatgcaaaa attctctagg gcttcttgca
     1081 tcgattaaaa gagagaaatt ttctttttga aattctgtaa attcaacttc actgagcatt
     1141 tttaaaagcc aaaacaagtt tttgataaac ttgctcgata ttagcgccac aaaccctagt
     1201 ttctcctatg gttgtgataa aatttgtatc tcctgcccag cgtggcacta gatgataatg
     1261 acaatgaaaa gctatgccag ctcctgcatc tttacttaaa ttcataccga tattgacccc
     1321 atttgcatga atttgctctt ttaaaatttt cactcccaaa cgcacaaaat ggctcatttc
     1381 ttgccaaatt tcatcgctta aattttctat atgctcttca tgtacataag gaatcaccat
     1441 aaaatgcccc gcagaataag gatagcggtt catcactcca aaacaatgct ttgctctaaa
     1501 aatcacgcct aattcttcat cgcttttgat cttattagca caatcgcaaa atggacaaac
     1561 acttttttct ttttcaaaat actcactccg ccatggtgca tacaaatact gcattttccc
     1621 tccttaaagc aaagctttta aagcctttcc ttcatctttt tcgcgcataa aatattcgcc
     1681 gattaaaaaa gcatcaacgc ctaaattttg caaatgcctt aaaaaatctt tatcctctaa
     1741 accgctttct gcgataataa tttttgaatt tggaatttgt gggatgagtt tttcgcataa
     1801 attcatatcc atagaaaaat catccaaatt gcgatgattt atgcctataa tatcagctcc
     1861 tgaaaaaatc gctttgctca aatcttcttt atcgtgaatt tccaccaagg cttcaagtcc
     1921 caaatgtctt gtaaattcaa gcaatctttt aagctctttc atacttaaca ttctagcgat
     1981 aagcaaaaca aaatccgccc cataaaccaa agcttctaaa atttgatact catcaaaaat
     2041 aaaatccttt cgcaacaaag gagcgtgcgt ataacggcgt atcatgctaa ggtattctaa
     2101 actcccttga aaaaaatgcg gttctgttaa aactgaaata gcagcagctc catttttttc
     2161 gtattttaaa gctatatcta aaggatcaaa attttccctt ataacccctt tacttggact
     2221 agctttttta acctctgcga taattcttac ttcattttct attcttttta aagcagcttt
     2281 aacatcttta ggaaaaaaag gattcgatgc taaagatcgt cccaacatat cataaggcag
     2341 ttgcgcctta cgctctttta aatcttcttt agttttttca aaaattttat ctaaaatcat
     2401 ggtttaatac acgcctttat tgcttttgca tgagccttgc tctcatcaga atttgcaaat
     2461 tctttatcct ctaaagtttg cttcaaaatt tcccaagcct ttttacaatc accttgttta
     2521 taataccccc acgctaaaga atccaaatag tataaatttt gaggctcttt ttttaaggca
     2581 agttcaacca atttcatacc ttttttaaga tctaaatcat aatctatcaa taaataccca
     2641 taataattca aatacaaagc atcactactt tcatcaatcg cattagaaaa tttttcgctc
     2701 acaagagcaa caacctgcgg agtgattttt ttattcaaat ttgcttcttc aaattcaaac
     2761 actgctgcac gcaaaagata ttctttctct tgagtacgtt tataaatttg catactaaga
     2821 tctttagcct tgttgtataa ttttaacctt tgatataaat aaagcttcat atcatcatct
     2881 gcattatatt ttaaagcaaa atgcaatgct tctttgtctt tgttttgaga acttaaaagc
     2941 tcgacaagag ctaggataaa gcttttgttt tttgtaatat tataaagctc tatataaatt
     3001 tcttgtaaag ctttgctatt gccctcatca ttataaatct ttgctagtaa aatgcaagtt
     3061 ttaagagtgc aaccattaat attttttgaa ttttctagta tatttttaat gcttgaagta
     3121 tcatttaata tagcataaac acccacgagc ttaaacaaaa tctcctcgtt ttgaacttga
     3181 ttataggcta gttgataata ttttatggca tcttttaaat tattttggcg tattaataca
     3241 tctccataaa gctctaaatt tcttggatca tcactttttt tctttaaaag cccttggata
     3301 agctcttgag cttctttaag attataagaa tttaaggcat aaagtgcact aagacgctta
     3361 agattatcac tcttatcaag ataaggcttg gctatattat ttatctcttc ttttttatca
     3421 aggttgtttg ctagagttag caaaaatgca ttttctaaaa aattagtaat attataatcc
     3481 ctaaaaagtg ccaaaaactc atccctagct tcttcatatt gattaaaata ttcataatta
     3541 taagctttca tgatccttaa atcaaattta ttgctctttt gctgcttata atcggggtaa
     3601 gctataatcg tttttgaagc cccacacgca gttaaaaaaa agcctattaa gacaaataac
     3661 aaattcctat acattctttt tttagctcct cttgatgtgt tttaaaatat tcccaaaaag
     3721 gaaaggtgcg gcattgcttc ggacgaaaat cataaataga gcaatttctt ttttccttat
     3781 cgaaaaaaat acatgcaaat ccatcttcaa attcaacttc cttaaaactc attctaaagc
     3841 ctaccttttt taaatatttc aaagcaaatt ctttttcatc taattgcaaa tgctctctca
     3901 aagcctttaa ctcttcctta tttgcaaaaa tatttccact ttctcctgtg caacattttc
     3961 caccgcattc ttgacaagca ttttcattaa atccataaga aaaatcttta ttaaatatca
     4021 taactttcca acctaaatct agagtgaatc tcttgcattt gctcactcaa attctcattt
     4081 ttatagataa aaaaaggggg taaaatctca caaggcgatt ttacactttt tctagcttgc
     4141 accaagacaa gtcttgctga aatattttga tgagtatgta caaaacgaat tttagttaat
     4201 tttagctttt tactctctaa aacaaggcaa attttatcta aagccaaggc ttcgtaacaa
     4261 aaatacaata cccccatagg ttttaacaaa gcattggatc taacaataaa ttcatttaaa
     4321 gtcaaatatt tttgaaattt acttatattt ttatgcgtat ttttaccctc atgcgcccca
     4381 tctctataaa aaggtggatt acaaactata aaatcaaatt ttttatcatt ttgaaaattt
     4441 ctaaaatctt catgcaatac tccagcttgt atattatttt gttttagatt acgatgaatg
     4501 agttctatat tttcttgttg tatatcaagc aaagataaat ctaaattaga aacaaatttt
     4561 ttaagtaaaa ttcctataat accacatccc gaacctactt ccaagacttg atttttaata
     4621 cccatttcta aaacaaaatc agctaaaagt aaagaatcgc tgttgtaacg ataaccatca
     4681 ctcaattggg ctaatttaat actatcttgc attttcaatg ggttggaatt ttaattcttt
     4741 ttaaaggagt attttctttg cttgtgtttt gttcttgctt taaagcatta ttttgacttg
     4801 caaaatctat aaaattttga gcaaaaagta aggaagataa tgatattgtg aaaaaaaatt
     4861 tcaacataat tttccttgaa atttatattc tatttaagtt tatttaaaaa atttaaatgg
     4921 tgtccacggc gagattcgaa ctcacggcct caaaattagg aattttgcgc tctatcctgc
     4981 tgagctacga ggacagaaag cgggaaaaat cccgctaaaa atttaaccgt ttcttttttt
     5041 gatgatttca tccgcaacat ttttaggaac ttcatcataa tgatcaaatt ccatagaata
     5101 agtcgcacga ccttgagttt gacttctaag atcagtagaa taaccaaaca tttcagccaa
     5161 aggacaaaat gctgtgatga ttttatttcc accacgctca tccatgctat ttacttgacc
     5221 acggcgtttg ttaagatctc caataacatc gcccatgtaa tcttcaggag tttctacttc
     5281 aactttcatc ataggctcta agatcacagc acctgctttt ctagcacctt ctttaaagcc
     5341 catagaagca gcaagtttaa acgccatctc agatgaatcc acctcgtgat aacttccatc
     5401 ataaacagtt actttaacat cttccacagg ataacctgct aaaacaccat tttgcaatgc
     5461 ttcttgaaca cctttatcaa ctgctggaat atattctttt ggaattactc cacctttgat
     5521 atcattaaca aattcatatc cactacctgg ctcaagtggt tcaaggcgta agaatacatg
     5581 tccatactga ccacgaccac ctgattgttt agcgtatttg tattcttgtt caacagtttt
     5641 tctaatagtt tcgcgataag caacttgtgg ttgacctact tcagcttcaa ctttaaattc
     5701 acgaagcata cgatcaacaa taatttcaag gtgtaattca cccatacctg aaatgatagt
     5761 ttggccactt tcttcatctg tagaaactct aaaacttgga tcttcttgtg ctaatttatt
     5821 taaagcaata gacatttttt cttgatctgc tttagttttt ggctcaactg caacagaaat
     5881 aactggatct ggaaaatcca ttctttcaag gattacctta tctttttcac ttgcaagagt
     5941 atcccctgtt aaagtatctt taagtcctac aacagcacca atttctcctg cgtaaagcac
     6001 tttaatctct tctcttttgt tagagtgcat ttttaacaaa cgaccaattc tttctttttt
     6061 atctttagtt gagttataag cataagaacc actttctaaa caaccgcgat aaacacgcac
     6121 gaaagtaagt tgtcctacaa atggatctgt cataatttta aatgcaagtc ctgcaaactc
     6181 gccatcatca gttgatttta cagaaacttc tgtaccatct tcatactcac ctttgatatt
     6241 agcaacttca tcaggagctg gtaaataagc cacaacagca tcaagtaaag gttgaacccc
     6301 tttattttta aacgctgtac cgcaaagcat aggaacaata gaaagactta agcaccctgc
     6361 tttaatccct gttttaatct cttcaaggct taattcttct ccgcctaaat atttttccat
     6421 caactcatct gaagtttcag aaactgcttc tatcattttt gtgcgatatt cttctgcctt
     6481 ttctttaagt tcagctggaa tttctttttc tacataatcc gttggcttag tatcatcttc
     6541 ccaaactaaa gctttcatag ttacaagatc gattacgcct ttaaaattat cctcagcacc
     6601 gattggaatt tgaagtggaa ctggattagc ttttaaacgg ttgcgaattt gatcttctac
     6661 attgtagaaa tttgcaccga ttctatccat tttgtttaca aatactattc ttggaacacc
     6721 atatttattt gcttgtctcc aaactgtttc actttgaggc tgcaccccac ccactgaaca
     6781 aaataccgca acagcaccat caagaacacg catagatctt tcaacttcaa ttgtaaaatc
     6841 cacgtggcct ggagtgtcaa taagattgat ttgatgatct ttccaaaaac aagttgtagc
     6901 cgcagaagtg atagtaatcc cacgctcttt ctcttgttcc atccagtcca tagttgcagc
     6961 accatcatga acttcaccga ttttatgact catacctgta aagaaaagaa ttctttcaga
     7021 tgtagtcgtt ttacccgcat caatgtgagc agcaataccg atatttctaa ctttttttaa
     7081 aggagtactt cttgacatac acactccttc ttaccaacga tagtgagcaa atgctttatt
     7141 tgcttcagcc attttataag tatcttcttt cttcttaaat gaagcacctt tgctattagc
     7201 agcatctaaa agctcagctg caagtttatc aatcatagtt ctttcacttc tttttctagc
     7261 aaaagaaata atccaacgaa ttgctaaagc ttgttgtcta gcaggacgaa cctctactgg
     7321 aacttgataa gtcgccccac ctacgcggcg agattttacc tctagcaaag gtttaatatt
     7381 ttcaatcgca tcattaaaga tatcaatacc ttttttttct ccaccttttt tatcgataag
     7441 ttctaaagca ccatacataa tcgtagtagc tgtgcttttt ttaccatcat acattaaaga
     7501 attaataaat tttgtgatta ctttgttacc ataaatcgga tcaggcaaga cttctcttac
     7561 cggagctttt cttcttctca ttatttttcc ttcaaatttt aaattttact caaacaaaat
     7621 caaatctaac ggatttgtct gtctaaaaaa ttacttagca cttgctttag ggcgttttgc
     7681 accatattta gaacgagaaa ctgttctttt tgcaacaccc gcagtatcaa gcgcaccacg
     7741 cacgatgtga tatttcacac ctggtaagtc ttttacccta cccccacgca ctaaaacaat
     7801 gctgtgttct tgtaggttgt gaccttcacc gccgatatag ctaatcactt caaagccgct
     7861 agtaagtctt actttggcaa cttttcttaa tgctgagttt ggttttttag gagttgttgt
     7921 ataaacccta gtgcaaactc cccttctttg tgggcaattt ttaagcgctg gagatttaga
     7981 tttttctaaa acttttttgc gctcttttct aaccaattga tttatggtag gcacaataat
     8041 tcctttcttt aaaaaatata ataaacttta gatgatatct aaattttact tacaaaaata
     8101 taaactagag atgttttagt agtgactaaa attaaaaatc ctatcccatc taaaactaga
     8161 tgagataata aaattattgt ttattagtat tatactgcaa atataccaca tgggtagcta
     8221 aatattcttc aagaccatgt tttccatcag ctccgcctat gccacttttt ctaaagcctg
     8281 catgaaaacc ttgcatagcc tcaaaatttt cacgattaat ataagtttca ccaaatttaa
     8341 tttctctgct agctctcatt gctatatcta aattttgtgt ataaatagaa cttgtaagac
     8401 catattcaca atcatttgcc atatcaatag cttcatcaag tgtatcaaat ttagcaatag
     8461 gtaaaatcgg agcaaaaatt tctttttgca tgatctcatc ttcgtgttta acattagtaa
     8521 gaacgcttgc gggaaaataa tacccacttg tatcagtgat ttttccaccg cattctacaa
     8581 tcgctccttt agctgtagct ctttgaagca ttgccaaagc attatcaact cctgcttgat
     8641 tgaccaatgg tcccatatca aaatcacctt ttaaggtatt tccaacactt actttactca
     8701 tggcttttac aaatttgtct acaaattcat cataaatgct tgtatgcaca taagctcttt
     8761 cagcacaatt acaaacttgt ccgttattgc aaattctact tgctttaatc gcttctactg
     8821 ctaaatcaat atccgcatct ttgcacacta tagctggcgc ctttccacca agttctaaag
     8881 aaactttgat aatattttta gctgcagctt ccattactct agtccctgct tcaacacttc
     8941 ctgtaagact taccatacct atattttcat tgcttgataa ttcatatcct actacactgc
     9001 ctttacctgc aactaagtta aaaacacctt ttggtaaaga actttgcgaa acaagctttg
     9061 caaattcaaa agcattgttt ggagtttcac tgcttggctt tataacaata gtatttcctg
     9121 ttagtaaagc aggtgccatc ttccttgcga ttaagaaaaa tggaaaattc caaggtaaaa
     9181 ttccaccaat taccccaata gcacttttat ataaatatat atgctcatta gccctatcgc
     9241 tttgtatgat ttcaccctca tatcttctag cccactcggc cgtataatcc atataatctg
     9301 ctgtaaaatt aatctctatg ctagccaaaa ctctggtttt tccttgctct tgcattaaaa
     9361 cttcggttaa gaaattagca tttttgcgta ttaaactagc tatttctttt aaatgatttg
     9421 ctctttcaat cgctggttta gcctcccaaa ctttttgtgc ttttttggct gcttcaatcg
     9481 ctcttttagt atcttctaaa gaagcgctag ctactcttga aatcacttct ttggtagccg
     9541 gatttaaaac ttcgataaat tctccattat gtgggataaa ctttccatca atataattta
     9601 aataagttgt cattttttct ccttttttag tctaagtgaa atacttcttc catatttagc
     9661 catttttgtc ctgcatagcc taaagatatt tgacaaggat ctgttacttt ccaccatttt
     9721 tgtgtgcttt catctcttgc cattttagcc atgtctgctt caaaatcagc acctacatat
     9781 tcaaaatatg caaataaata ttctccgaac aaataaatgg aataattttg catattgcac
     9841 ttcttaatca tctcgcaaac cccttcataa ggctttgcgt gaagattttt atattcctct
     9901 attttttcct tttttatctt tatgatttgg ccatatcttt gcatctatcc tccttgtaaa
     9961 ttgataaagc attttgataa aatatcttat ttaagttttt gaaaatttta ctttctatga
    10021 tgagtttagc ccacttagct ggagctattt ttgccacagg ataattgcta ccaaatatga
    10081 atttatcttc actaaaattt tctttaaaaa aagcaaaaag ctcataaata aattcctttg
    10141 aggtttgttc tgaaaaatca tctggaaccg aaagcttaat atataaattt ggaaattttt
    10201 tcaaaagatt taaatctttt ttatactcat ttaaacgat
//
LOCUS       DAQUWA010000061        10062 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.061, whole genome shotgun sequence.
ACCESSION   DAQUWA010000061 DAQUWA010000000
VERSION     DAQUWA010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10062)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10062)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10062
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.061"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            19..2286
                     /locus_tag="R8X70_001444"
     CDS             19..2286
                     /locus_tag="R8X70_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929206.1"
                     /translation="MLPLVLTSLEELILNEEKILSDIQALKANKLIIRSSSLSEDSMK
                     NSNAGAFLSLANIDANSKDELLKALYKVANSMPSKSDEILIQPMLENITLCGVGFSVD
                     KDNFSPYFCLQYDENGSNNSITDGSSKSAKTYYHYREHLDFKDIKLQKIIELIKELES
                     LYDCCFLDVEFAFAFKDNKEELFCLQVRPLVMQEKENLFNALPKEALQRFYKRFISLQ
                     NLRPRVLGEKALFGVMPDWNPAEIIGLRPKRLAFSLYKEIITDNIWAYQRDNYGYKDL
                     RSHPLIHSFLGIPYVDVRLSFNSFIPKKLDENIAQKLVNFYLDKLNKNHELHDKIEFD
                     IVYSCYDFNSSKKLQELLNHGFNENELKRLEFSLLELTNKIINPQSGLYLKDIKKAYR
                     LKERYDGIIDSNFSLIDKIYWLIEECKRYGTLPFAGVARAAFVAMQLLNSLVEINFIS
                     KEEKNDFLNSLNTVSKNLSKQTNNLNSCTKNQFLIEFGHLRAGTYNILSPRYDENFEL
                     YFEINQKDNNVYLEDKAFILPEEKMKALNTLLKEHGLEISACEFFDFLKQSIEGRELL
                     KFEFTRLLSKAIVYIEELGKYYDIKKEDLAHLDIKSILNLYSSLYSINPREQFLEEIA
                     RNKKEYKLTQAIKLPSLLCNTEEIFSFYNHSIIPNFITQKSITAFTAKENDKDLEGKI
                     VLIYAADPGYDYLFTKNIAGLITCYGGANSHMAIRASELGMPAVIGVGEENFEKYLKA
                     KKINIECESEQIFCL"
     gene            2277..2885
                     /locus_tag="R8X70_001445"
     CDS             2277..2885
                     /locus_tag="R8X70_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEF2929207.1"
                     /translation="MFIGITQRLICNESYYEERECLAKDWGELFNKDLFKNFIPLPLS
                     YKIDFSRYKDLVKAVILSGGNDLNFLNPNAMSKKRDSYEIQVIEACLKEKIPLLGICR
                     GAQIIAHYFNSCISPYVNHVSKHEIFFLEEKFISNSFHNFAIARLGDELEPLCFAKDK
                     TIEAFKHKYENIFGIMWHIEREDGLNNVQILKEWLDLIKEEK"
     gene            2882..3652
                     /locus_tag="R8X70_001446"
     CDS             2882..3652
                     /locus_tag="R8X70_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HEF2929208.1"
                     /translation="MKAIILAAGFGSRLMPLTKNQPKCMVEYKNKKIIDYEIQALKEN
                     NIDEICVVGGYLFDVLRTYINQSYDLVTFYKNENYDKTNMVQTLFCARDFLQKCIEDK
                     QDLIISYADIVYFKNSIEKLKEAKEDFAVIVDKDWKELWEKRFENPLDDAETLKLKDG
                     FIVELGKKAKTYDEIQGQYTGLFKFSYLFLKEVIKTYDSLDKNLTYDGKDFKNMYMTS
                     FLQILIDKYKNAKAVEIKGNWCEIDFMSDLEINPIKNQ"
     gene            complement(3636..5474)
                     /locus_tag="R8X70_001447"
     CDS             complement(3636..5474)
                     /locus_tag="R8X70_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEF2929209.1"
                     /translation="MRYYELAVFGLYLQNLTFHSKEEIPALREVIIDLKNKKNLRALV
                     LKECQKPEFQTKEIKEITPFSLSHTQFELAKFISYYYTSKLGFVLGLFSTHQTYTCSA
                     TKIENKPELSQKQEEALKFIETHPTSLLFADTGSGKTEIYICLIKQYLEQGKQVLLLM
                     PEISLTPQMQKRLEVYFKDKFFLWHSKISKKKKQENLERFCKGEALLVAGARSALFLP
                     FVNLGLIIVDEEHDNSYKASNQPYINARDLALFLGSKFDIKVLLGSATPSLTSFYKQK
                     SFRLKGTFFESKKHFLYDENELDITPMLLGELKKSLENQKQAIIFLPTRANFRQIVCK
                     DCGQTIKCPFCSIAMSLHKKRNVLKCHYCNYTSLIEQNCPSCQGAMLEARKMGTAELQ
                     ELLQEALPLARIAKFDSDEITSIRKLNAVLKDFNENKIDILIGTSMLAKGHDYHSVDL
                     SVILGLDEYLFRPNFKASEETLALAMQVAGRAGRKGEGRVLLQTKNRNFFERYIEDYD
                     SFLQDELENRKDLYPPFKRLLRIVIEDKEQKQAQNLCQKLVDQISGTLKVEIIGYGAC
                     SIEMLKGQYRFYILLRSDFYKVLIKIQEYALNFKNVSVDIDPIDFL"
     gene            complement(5471..5917)
                     /locus_tag="R8X70_001448"
     CDS             complement(5471..5917)
                     /locus_tag="R8X70_001448"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEF2929210.1"
                     /translation="MKKAFTLLELVFVILILGILASLSFSFVNQNKNDAKLLKLKIDY
                     EMLNSALSLMRTQTELKQINAFSPNLDEAKINTQKEKLFYCQTSQNCTYSLLHTPIYS
                     SFNAWMKTAPNRYRFFLNAKEWVDFFYNANFAILECLSEKYCKELL"
     gene            complement(5914..6159)
                     /locus_tag="R8X70_001449"
     CDS             complement(5914..6159)
                     /locus_tag="R8X70_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929211.1"
                     /translation="MASDNLKQVIINVSAKDFIVKCSGEFANFLEDDIALISGGTKKI
                     ELKRFVDAFVKKSYENYILERELKKLIKAINEELPVK"
     gene            complement(6149..6379)
                     /locus_tag="R8X70_001450"
     CDS             complement(6149..6379)
                     /locus_tag="R8X70_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929212.1"
                     /translation="MFDEKIINTMSDKVNELIEKYNEVCEANENLRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIFKKIEAVLGK"
     gene            6533..8506
                     /gene="uvrB"
                     /locus_tag="R8X70_001451"
     CDS             6533..8506
                     /gene="uvrB"
                     /locus_tag="R8X70_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEF2929213.1"
                     /translation="MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDEL
                     DAMYHYNVLENKKVKDLKRFILYPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENK
                     LVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKNRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFV
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKIEKMPANERAKI
                     VKELRKQMLEAAKALEFEKAATLRDEINKLKDL"
     gene            complement(8541..9965)
                     /locus_tag="R8X70_001452"
     CDS             complement(8541..9965)
                     /locus_tag="R8X70_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HEF2929214.1"
                     /translation="MDFLTSLDESIQFLIQIIIVLICLFYGAKKGGIALGLLGGIGIL
                     MLVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTIL
                     APFVTCFLTILCGTGHVVYTIMPIIYDIAIKNGIRPERPMAAASISSQMGIIASPVSV
                     AVVSLTALLLNAEHKLAGFDGYINLLQITIPSTLFGVLCVGIFSWFRGKDLDKDEVFQ
                     EKLKDPEFKKYVYGDSKTLLGVQLPKSNWIAMWIFLGAIALVALLGIFDSLRPNWGQV
                     VKNGIPQVDALGNPKMDILSMVSVIQMFMLLAGSLIIIFTKTDVKKIGSNEIFKSGMI
                     ALVAVFGISWMADTMFAVHTPMMKKALGDVVVDYPWTYAIMLLLISKFVNSQAAAIAA
                     FVPLALGIGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFI
                     LPGLIGVISSCVAGYFLALAAGYL"
BASE COUNT         3693 a         1520 c         1535 g         3314 t
ORIGIN      
        1 aaattaaaaa aagcaaaaat tctacctttg gtcttgactt cgcttgaaga attaatatta
       61 aatgaagaga aaattttaag tgatattcaa gctttaaaag ccaataaact catcataaga
      121 agttcttctt taagcgaaga tagtatgaaa aactccaatg cgggagcttt tctttccttg
      181 gcaaatatcg atgcgaattc taaagatgaa ttattaaaag ctttatataa agttgctaat
      241 tccatgccat caaaaagtga tgaaatttta atccaaccta tgcttgaaaa tattacactt
      301 tgtggtgttg gttttagcgt cgataaggat aatttttctc cttatttttg ccttcaatat
      361 gatgaaaatg gttcaaataa ttccattaca gatggaagca gtaagagtgc aaaaacttac
      421 tatcactata gagagcattt ggattttaaa gatatcaaac tccagaagat tatagagctt
      481 ataaaagaat tagaatcttt atatgattgt tgttttttag atgttgaatt tgcatttgct
      541 tttaaagaca ataaagaaga gcttttttgt ttacaggtaa gacctttagt gatgcaagaa
      601 aaagaaaatt tatttaatgc tttaccaaaa gaagctttgc aaagatttta taagcgtttt
      661 atttctttgc aaaatttgcg tcctagagtg ttaggagaaa aagcactttt tggagtaatg
      721 cccgattgga atcctgctga aatcattggt ttaagaccaa agcgtttagc ttttagttta
      781 tataaagaaa tcattacaga taatatatgg gcgtatcaaa gagacaatta tggctacaaa
      841 gatttaagat ctcatccttt gattcattct tttttgggca ttccttatgt agatgtaaga
      901 ttatctttta attctttcat acctaaaaaa ttagatgaaa atattgcaca aaaacttgtc
      961 aatttctact tagataaact taataaaaac catgaattac atgataaaat tgaatttgat
     1021 atcgtttatt cttgttatga ttttaacagt tctaaaaaat tacaagagct tttaaatcac
     1081 ggttttaatg aaaatgagct taaaagatta gaattttcat tactagaact tacaaataag
     1141 attattaatc cccaatcggg actttactta aaagatataa agaaagctta cagattaaaa
     1201 gaaagatatg acggtattat tgattcaaat ttttctttaa tcgataaaat ttattggctt
     1261 attgaagagt gtaagcgtta tggaacttta ccttttgcag gagtagctag agctgcattt
     1321 gtggcaatgc aacttttaaa ttctttagtt gagattaatt tcataagcaa agaagaaaaa
     1381 aatgattttt taaattcact taatacagtg agtaaaaatt taagtaagca aacaaataat
     1441 cttaactctt gtactaaaaa tcaatttttg atagaatttg gacacttaag agcgggaact
     1501 tataacatct tatctccaag atatgacgaa aattttgagc tttattttga aataaatcaa
     1561 aaagataata atgtttattt agaagataaa gcttttattc ttccagaaga aaagatgaaa
     1621 gctttaaata ctctacttaa agaacatgga ttagaaatta gtgcttgtga attttttgat
     1681 tttttaaaac agtctatcga aggcagagaa ttgcttaagt ttgaatttac cagattgctt
     1741 tctaaagcta tagtttatat tgaagaatta ggtaaatatt atgatatcaa aaaagaagat
     1801 ctggctcatc ttgatatcaa aagtatttta aatctttatt ctagtcttta ttctataaat
     1861 ccaagagagc aatttttaga agagattgct cgaaataaaa aagaatataa actcacacaa
     1921 gctataaaac ttccttcctt actttgcaat actgaggaaa ttttttcttt ttataatcat
     1981 agtattattc caaattttat cacacaaaaa agtataaccg catttacagc caaagaaaat
     2041 gataaagatt tagaaggaaa aattgtttta atctatgcag cagatcctgg atatgattat
     2101 ttatttacaa aaaatatagc aggacttatc acatgctatg ggggtgctaa ctcacatatg
     2161 gctattcgtg cttcagagct tggaatgcct gctgttatag gagttgggga agaaaatttt
     2221 gaaaaatatt taaaggctaa aaaaataaat attgaatgtg aaagtgagca aatattttgt
     2281 ttataggtat tacccaaagg cttatttgca atgaaagtta ttatgaggaa agagaatgtt
     2341 tggcaaaaga ttggggagaa ttatttaata aagatttatt taaaaatttt attccccttc
     2401 cgcttagcta taaaatagat ttttctcgct acaaagatct tgtaaaagct gtgatactaa
     2461 gtggtggtaa tgatttaaat tttttaaatc ctaatgcaat gtctaaaaaa agggattctt
     2521 atgaaataca agtcatagaa gcttgcttaa aagaaaaaat tccactttta ggtatttgta
     2581 gaggggctca aataatagct cattatttta atagttgtat aagcccctat gtaaatcatg
     2641 taagcaaaca tgaaatattt tttttagaag aaaaatttat aagtaattct tttcacaatt
     2701 ttgcaattgc tagactggga gatgaacttg agcccttatg ctttgcaaaa gataaaacta
     2761 tagaagcttt taaacataag tatgaaaata tttttggtat aatgtggcat atcgaaagag
     2821 aagatggatt aaacaatgtt caaattttaa aagaatggct tgatttgatt aaggaagaaa
     2881 aatgaaagca attattttag cggcaggttt tggatcaagg ctaatgcctt taacaaaaaa
     2941 tcaaccaaaa tgtatggttg aatataaaaa taaaaaaata atagattatg aaattcaagc
     3001 cttaaaagaa aacaatatcg atgaaatatg tgtagtaggt ggatatttat ttgatgtttt
     3061 aaggacttat ataaatcaaa gttatgattt agtaacattt tataaaaatg aaaactatga
     3121 taaaacaaat atggtgcaaa ctttattttg cgctagagat tttttacaaa aatgcatcga
     3181 agataaacaa gatttaatca tctcttatgc tgatatagtt tattttaaga atagcataga
     3241 aaaattaaaa gaagcaaaag aagattttgc tgttattgtg gataaagatt ggaaagaact
     3301 atgggaaaaa cgatttgaaa atccacttga tgatgctgaa actttaaaat taaaagatgg
     3361 ttttattgta gagcttggca aaaaagctaa aacttatgat gaaattcaag gtcaatatac
     3421 aggcttattt aagttttcat atctttttct aaaggaggtt ataaaaactt acgatagtct
     3481 tgataagaat ttgacttatg atggaaaaga ttttaagaat atgtacatga caagtttttt
     3541 acaaatttta attgacaaat acaaaaatgc aaaagctgtg gaaatcaaag gtaattggtg
     3601 tgagattgat tttatgagtg atttggaaat caatcctata aaaaatcaat aggatctata
     3661 tctacactaa catttttaaa atttaaagca tattcttgta tcttaattaa gaccttataa
     3721 aaatcactac gaagcaatat ataaaaacga tattgtcctt ttagcatttc tatgctgcaa
     3781 gctccatatc ctatgatttc aacttttaaa gtgccactaa tctgatcaac taatttctga
     3841 cataaatttt gagcctgctt ttgttcttta tcttcgatga caattctcaa aagacgctta
     3901 aaaggaggat aaagatcttt tctgttttct aattcatctt gcaaaaagct atcataatcc
     3961 tctatatatc tttcaaagaa attcctattt ttagtttgca aaagtaccct tccctcacct
     4021 ttgcgccctg ctcttcctgc tacttgcata gccaaagcta aagtttcttc acttgcctta
     4081 aaattaggtc gaaatagata ctcatcaagc cccaagataa cactcaaatc cacactatga
     4141 taatcatgtc ctttagcaag catagaagtt cctataagta tatcgatctt attttcatta
     4201 aaatctttca aaacagcatt aagctttcga atactcgtaa tctcatcgct gtcaaatttg
     4261 gctatccttg ctagaggtaa agcttcttgc aaaagctctt gcaattctgc cgtgcccatc
     4321 ttcctagcct ctagcattgc accttgacag ctaggacaat tttgctctat taaagaagta
     4381 taattacaat aatgacactt taaaacattt ctttttttat gcaaactcat agcaatagaa
     4441 caaaaaggac attttatagt ttgcccacaa tctttacata caatttgtct aaaattagcc
     4501 ctagtaggta agaaaatgat agcttgcttt tgattttcca agcttttttt caactcacct
     4561 aaaagcatag gagttatgtc tagttcattt tcatcatata aaaaatgttt tttgctttca
     4621 aaaaaagtac ccttaagcct aaaactcttt tgcttataaa aactcgttaa agaaggagta
     4681 gctgagccca aaagcacttt gatatcaaat ttcgagccta aaaaaagcgc taaatctcta
     4741 gcattaatat agggttgatt agacgctttg taagaattat catgctcttc atccactata
     4801 ataagcccta aatttacaaa aggtaaaaat aaagccgatc ttgctcctgc gaccaaaagt
     4861 gcttcaccct tgcaaaaacg ctctaaattt tcttgctttt ttttctttga aattttagaa
     4921 tgccatagaa aaaatttatc tttaaaatac acctctaagc gcttttgcat ctgcggggta
     4981 agagaaattt ctggcattaa aagcaaaacc tgtttccctt gttctaaata ttgctttatt
     5041 aaacaaatat aaatttcagt ttttccacta cccgtatctg caaaaagcaa agaagtagga
     5101 tgagtctcta taaattttaa agcttcttct tgcttttggc ttaattcggg tttattttct
     5161 attttagtcg cactacaagt ataagtttga tgagtagaaa aaagtcctaa tacaaaacca
     5221 agttttgaag tataataata cgaaataaat ttcgccaatt caaactgcgt atgacttaat
     5281 gaaaagggtg tgatttcttt aatttctttt gtttgaaatt caggcttttg gcattctttt
     5341 aatactaaag ctctaagatt ttttttattt tttaaatcaa taataacctc tcttaaagcc
     5401 ggaatttctt ccttgctatg aaaggttaaa ttttgcaaat aaagtccaaa aactgctaat
     5461 tcataatatc tcataacaat tctttacaat atttttcact aagacattct aaaatagcaa
     5521 aattggcatt ataaaaaaaa tcaacccatt cttttgcatt taaaaaaaat ctatatcggt
     5581 tgggtgctgt tttcatccaa gcattaaaac tagaataaat gggtgtgtga agtaaagaat
     5641 aagtgcaatt ttggctagtt tgacagtaaa atagcttttc tttttgagtg ttgatttttg
     5701 cttcatcaag attaggagaa aaagcattga tttgcttaag ttcagtctga gtgcgcataa
     5761 gagacagggc tgaatttagc atttcataat ctatttttaa ttttaacaat tttgcatcat
     5821 ttttattttg attgacaaaa gagaagctta aacttgctaa tatccccaaa atcaatatca
     5881 caaaaacaag ctctaaaaga gtaaaagcct ttttcatttt acagggagtt cttcattgat
     5941 cgcttttata agttttttaa gttctctttc taagatataa ttctcatagc ttttttttac
     6001 aaaagcatcg acgaaacgct ttaattctat ttttttagta ccaccagaaa taagagcgat
     6061 atcatcttct aaaaaatttg caaattctcc actgcattta acaatgaaat cctttgcaga
     6121 aacattgata ataacttgtt ttaaattatc acttgccaag tacagcctct atttttttga
     6181 aaatatcttc actttctata ttgcgagact taagctcttc ttccaaacgc atgatttgat
     6241 tactctttgc ttcattttgc gcttttacgc ttacaagttc gtttcttaaa ttttcatttg
     6301 cttcgcacac ttcgttgtat ttttcaatca actcattgac tttatctgac attgtgttaa
     6361 taattttttc atcaaacata aatttgcctt ctgctataga aatttaaaat aaaaatattt
     6421 tttgtaattg tagcagaaaa aaatttaaat ttaggttttt tatagtcaat taatttttaa
     6481 ttaaagcatt ttcttttaga atttttctaa aaaactttca aaaagcggga aaatgttaga
     6541 acttacaagc gattttaaac caagtcctga tcaagaacaa gcaatacaag gtattgtcaa
     6601 aagcataaaa aaaggtaata aatatcaaac cctactcggc gtaacaggaa gcggaaagac
     6661 ttttaccatg gcaaatgtca taaaagaact caatatgcca acccttatca tgagtcataa
     6721 caaaagcctt tgcgcccagc tttatagcga atttaaaggt tttttttcta agaaccatgt
     6781 ggaatatttt atttcttatt atgattatta tcagcctgaa gcttatatac cgcgcaccga
     6841 tgtttttata gaaaaagata gctccacaaa tgaggatcta gaacgcttaa gacttagcgc
     6901 aactgcttcg cttttaagct atgaggatgt ggtttgtatc gctagtgtct cggctaatta
     6961 tggacttgga aatccaaatg aatacatagg aatggtttta atctttgaac tagacatgca
     7021 aatttcacaa aaagaacttt taaagaaact tgtagacatg ggttataaaa gaaatgataa
     7081 tttctttgat cgtgctgatt ttcgcgtaca aggtgatatt atagatattt atccagctta
     7141 ttatgaagat gaagtagtaa gacttgaatt ttttggcgat gagcttgatg ctatgtatca
     7201 ttacaatgtt ttagaaaata aaaaagtcaa agatttaaaa cgcttcatac tctatcctac
     7261 aagccagttt agtgtaggtg aaacaagact aaaacaagcg ataaaagaca taaaagcaga
     7321 acttaacgaa cgccttgctt attttgaaca tgaaaataaa ctcgtagaat atcaacgcct
     7381 taaacaaagg gttgaatttg atcttgaaat gcttacaagc acaggaatgt gtaaaggcgt
     7441 tgaaaattat gcaagacatt taacagggct taaagaaggt gatactcctt atacgctttt
     7501 tgattatttt gcgattaaaa ataggaaatt tcttgttata gtcgatgaaa gccatgtttc
     7561 tttaccacaa tttagaggta tgtttgcagg agatagaagc agaaaacaaa ccttggtaga
     7621 ttatggtttt cgtcttccat cagctcttga taatcgtcct ttaatgtttg atgaatttat
     7681 ccataaagat tgtcagtttc tttttgtttc agccacccct gccccgcttg agcttgaact
     7741 tagcaaggaa aatatctttc atcaaattat gcgtccaaca ggattacttg atcctttaat
     7801 agaacttaaa gatagcgata atcaagttga aattttattt gatgaagcca aaaaagttat
     7861 acaaagaaac gaacgcgttt tagttactgt gttgactaaa aaactagctg aagagcttac
     7921 aaggtattat ttagaacttg gtattaaagt aaaatacatg cattcagata ttgatgcaat
     7981 agaacgcaat gaaatcataa gaggcttaag aagcggtgct tttgatatgt taataggtat
     8041 aaatttactt agagaaggac ttgatttgcc tgaggtttcg cttattgcca ttatggacgc
     8101 agataaggag ggttttttaa gaagcactac aagtttaatc caaaccatgg gaagagctgc
     8161 tagaaatgtc aatggcaaag ttttactctt ttgcaaaaag attacaaaat ccatgcaaga
     8221 agctatggat actacaaatg agcgtcgcaa acttcaagaa gcttacaatc aaaaacataa
     8281 catcacccca acttcagtca agcgacacat cgaagaaagt ttaaaaaatg aagaaaactt
     8341 aggagaaatt tatcgcaaag gtaaaaaaat tgaaaaaatg cctgctaatg aaagagctaa
     8401 aatcgtaaaa gagcttcgta aacaaatgct tgaagctgct aaagcgctcg aatttgaaaa
     8461 agcagcgact ttaagagatg agatcaataa attaaaagat ttatagtatt tttattttgc
     8521 aggaaaaatc ctgcaaaata ttaaagatat cctgctgcta aagctaagaa atatcccgca
     8581 acacaagaac taatcacacc tataagacct ggtaaaataa aactatgatt gataacaaat
     8641 ttacctatat gagtcgtacc cgatctatca aattgtatag tcgctaagtc acttggataa
     8701 gttggtaaaa tataataccc atagcaagct gccgcaaaag ccacaatcac acctggttca
     8761 acacctattc ctaaggccaa aggaacaaaa gctgcaatag ctgctgcttg agagtttaca
     8821 aattttgaaa taagtaaaag catgattgca taagtccaag gataatctac aactacatct
     8881 ccaagagctt ttttcatcat aggagtatga acagcaaaca tagtatcagc catccaagaa
     8941 attccaaaaa ctgcaacaag agctatcata ccggatttaa aaatctcatt tgagccgatt
     9001 ttttttacat ctgttttagt aaagataata atcaaagaac ctgctaaaag catgaacatt
     9061 tgaatcactg aaaccataga taaaatatcc attttaggat tgcctaaagc atctacttga
     9121 ggaataccat tttttacaac ttgtccccaa tttgggcgta aagaatcaaa tatacctaat
     9181 aaagccacta aagcaatagc tcctaagaaa atccacattg caatccaatt gctttttgga
     9241 agttgaacac ctaaaagtgt tttagaatca ccataaacat attttttaaa ttcaggatct
     9301 ttaagttttt cttgaaaaac ctcatcttta tccaaatctt ttcctctaaa ccaagaaaaa
     9361 attcccacac ataaaacacc aaaaagcgta ctaggtatag taatttgaag aagattgata
     9421 tagccatcaa aacctgctaa tttatgttct gcatttaaaa gcaaagctgt taaactcaca
     9481 actgcaacag aaacaggact tgcaataata cccatttgtg aagatataga agctgctgcc
     9541 atagggcgtt ctggacgaat tccattttta atcgctatgt cataaataat aggcataata
     9601 gtataaacca catgtcctgt cccacaaagt atggttaaaa agcaagttac aaagggagct
     9661 aaaatggtta agaatttagg attgcgtctt aaaattcttt cagctatttg aagcattaca
     9721 tcaagaccgc cacttgcttg taaagtcgca cttgcaacaa ccacagctaa gatagtaagc
     9781 attacatcta tagcgggctt tccaggtttt atatgaaaag caaaaacaag cattaaaata
     9841 cctataccac cgagtaagcc aagagctata ccaccttttt ttgcaccgta aaaaagacaa
     9901 attaaaacaa tgatgatttg tatcaaaaac tgaatactct catctagact ggttaaaaag
     9961 tccattttaa ctccttttat ggaataaatt taaaaattat tgtgattata gcacaatttt
    10021 aaataaaaaa aacatatagt taaaataata taccaataaa ta
//
LOCUS       DAQUWA010000062        10046 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.062, whole genome shotgun sequence.
ACCESSION   DAQUWA010000062 DAQUWA010000000
VERSION     DAQUWA010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10046
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.062"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..956
                     /locus_tag="R8X70_001453"
     CDS             <1..956
                     /locus_tag="R8X70_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HEF2929215.1"
                     /translation="LYCDQYTGYVLNATVSLYVHCTLTERNDQKIIFDSSDTGIKVEY
                     QSKEFLENDGKLDLYKAIYNRLIKDYIKRPLSFSLHTYSDVPSGSGLGGSSTLVVGII
                     KAFAEWLNLPLGEYEIARLAYEIEREDMAIVGGAQDQYAATFGGFNFMEFYDQKRVIV
                     NPLRIKNWIASELEARVLLYFTNITREAKDIEEHKKGKLGDENSLNAMHAIKQDALDM
                     KEALFRADFEKIAQILGKSWQSKKIISEIVSNDELERIYHLAMENGAYSGKTSGAGAG
                     GFMFFMVDPVKKYKLKKILNEQQGYVQEFYFTKEGAKSWKI"
     gene            944..1549
                     /locus_tag="R8X70_001454"
     CDS             944..1549
                     /locus_tag="R8X70_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEF2929216.1"
                     /translation="MENLNLYIKSHFSDSIDVKDKILNDDNIINLIKEVSLKVISAYK
                     NGHKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYEN
                     LFARQVQAQGVSGDVFIGISTSGNSKNILKALDVCKEKGILSIGLTGASGGAMNELCD
                     YCIKVPSSCTPRIQEAHILIGHIICAIVEEELFGKGFDCKL"
     gene            1537..2205
                     /locus_tag="R8X70_001455"
     CDS             1537..2205
                     /locus_tag="R8X70_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEF2929217.1"
                     /translation="MQAIVLAGGLGTRLRSVVQDLPKPMAPINGKPFLAFVLEYLKKQ
                     GITEIILSVSYKYELIQEYFKDEFHGMKIHYNIEKELLGTGGAIKDALKLVKNEAYVV
                     NGDTFFDIDLKKLVLNSSKICIALKQMQNFDRYGTVNVDEQGIVTSFEEKVFKKQGLI
                     NGGVYLLKKDIFNNFSLERKFSFEEFLQENYKLLKIQTQIFDDYFIDIGIPEDYIKFI
                     KLRK"
     gene            3492..3806
                     /locus_tag="R8X70_001456"
                     /pseudo
     CDS             3492..3806
                     /locus_tag="R8X70_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661054.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3848..4591
                     /gene="cysQ"
                     /locus_tag="R8X70_001457"
     CDS             3848..4591
                     /gene="cysQ"
                     /locus_tag="R8X70_001457"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEF2929218.1"
                     /translation="MLSQITLKDINDIAIKAGKSVLKIYNQDFKISYKDDNSPLSEAD
                     LISNEIICKELAKFSLPILSEENKTLPYEQRKDWEYFWCVDPIDGTKEFINKNGEFTI
                     NIALVYKDTPVLGVVYAPALELLYSAKKGEGAFKNGVKLPLQRNDNFLKIVASKSHLN
                     EQTKDFIDSIQATKQKEFVSMGSSLKLCLVASNEADIYPRLAPTMEWDTAAADAIVRE
                     VGKMTYDFDTQKPLVYNKENLLNLYFIVK"
     gene            4596..5489
                     /gene="cysD"
                     /locus_tag="R8X70_001458"
     CDS             4596..5489
                     /gene="cysD"
                     /locus_tag="R8X70_001458"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEF2929219.1"
                     /translation="MTHLDFLESESIHIIREVVAEFEKPAMLYSVGKDSSVMLHLLQK
                     AFYPAVPPLPLVHVDTTWKFKEMIEFRDKRAKELGMELIVYQNPKIKELNLSPFTHGS
                     SMHTDISKTQGLKQMLDLYQFDAVFGGARRDEEKSRAKERIYSFRDENHSWDPKNQRP
                     ELWNIYNGRHKKGESIRVFPLSNWTELDIWQYIYKENIPIPSLYFAKKRPVIEYMGAK
                     ILVDDDRMPKELAKNAKEELVRFRTLGCYPLTGAINSNASNVLEIIEELLLSKTSERQ
                     GRLIDTDEEASMEKKKKEGYF"
     gene            5489..6913
                     /gene="cysN"
                     /locus_tag="R8X70_001459"
     CDS             5489..6913
                     /gene="cysN"
                     /locus_tag="R8X70_001459"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HEF2929220.1"
                     /translation="MQTNIEKYLQEHENKELCRFITCGSVDDGKSTLIGRMLYDSKML
                     FEDQILSLEKDSKKLGNAGEKLDFALLVDGLASEREQGITIDVAYRFFTSEKRKFIIA
                     DTPGHEQYTRNMATGASTADIAIILIDARKGVLTQTKRHSYIVSLLGIKQFIIAINKM
                     DLVDFRQDIFDDICKSYKEILPYLKNYENIQTHFVPISALDGDNIASKSINMPWYDGK
                     TLSELLDTLPIVTNLSDEFIMSVQYVNRPHLNFRGFCGNIASGSINVKDEVVILPSLK
                     TSKVKQIITPSIKNLNVSDKNEKNQSAKNASFPSAITLTLEDEIDISRGDAMASKNHS
                     IEISNSFKAMVIWMSEAKFSLNGNYLIKIANLTTSITFEKIDYKKDINTFEEFQSDEL
                     KLNDIAKCTLRLSKKTALAAYKDNKTLGSFIIIDKYSNETLAAGMVEEILASEEKSRI
                     YTQAEIELNAYIRKNYPEWECKKI"
     gene            6910..8625
                     /locus_tag="R8X70_001460"
     CDS             6910..8625
                     /locus_tag="R8X70_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEF2929221.1"
                     /translation="MKIIVALSILILLILLISNKIKPFILFGSVAVLYYLLGYLNLNT
                     WLSSYTSESLIVLILLLLVSLAIEKSAVIAWCSKFIIGKNYHLSLLKLGVITASISAF
                     LNNTAVVASFMSIIKNNKFQAPSKLLIPLSYFSIVGGTMTLIGTSTNLIVNSFVVQNG
                     LQSLKIFDFFAVGFCISVSVLIVLLIFSFLLPNYQEKDNEINEYLINAKVLKNSSLIG
                     KTIQENGLRNLEFLFLFEIQRQDEIISPVSHDEIIKEGDVLIFSGDITHLETLKKFDG
                     LQMGAQEIKLETLNLVDVVINSESSLIGKSVKEANFRAKFDAGIVALKRGSQNISKIG
                     KSVLQAGDRLILSVGKDFHSRDNINKNFYIISNIIQNQKLSNVQSFIVVFVFLAIIAL
                     SALEIVSLLKALLVFLAFLFVFKIISFDEIKRRFPLEIFIIVGSSLAITKVLVDSGLA
                     KDFADLIIGTFGAYGLYGSFVGIYLLTLLLTEIITNNAAAALAFPIAYSTALALEVNP
                     VPFILAVAYGASCGFMMPHGYQTHLMVGSICGYKTTDFVKIGWIVSLTYSAMVLIMTP
                     IFFKF"
     gene            8635..9219
                     /gene="cysC"
                     /locus_tag="R8X70_001461"
     CDS             8635..9219
                     /gene="cysC"
                     /locus_tag="R8X70_001461"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEF2929222.1"
                     /translation="MDNNLTWHTSSITKAQRAKLKKQKPRVLWFTGLSGSGKSTLANA
                     VEKKLFEQDFHTYLLDGDNVRHGLNGDLGFDEASRVENIRRIGELCKLFMDAGMIVLC
                     AFISPFEKDRKLVKDLLEEDEYIEIFVDTSLEVCEKRDPKGLYKKARNGEIKNFTGID
                     SPYEKPKNPHIHIIKEDLNENVDMILRFLNGKYK"
     gene            9297..>10046
                     /locus_tag="R8X70_001462"
     CDS             9297..>10046
                     /locus_tag="R8X70_001462"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929223.1"
                     /translation="MQKQNYYYPISIKNIGRLNDHNPFAHKFNTLLNKTDDLKIFSRE
                     FKNLNNEIKMCNCDKIIISMENVQWLLNSQQKIKYFYDFLIYIFDNIKIIVYLRDVAE
                     LFISMCSQAIKDDSHLDYHFLYPYQNKKSKILSDYKQTLQWWGEIFGKENLIVRLFNK
                     NEFYRGDLLKDFIYSVDLKWDEKFQIPIKENETLDLIGFELLSRVNRLKPFMFKSRYF
                     DIVEYFDRNCTNVKQYSHLKFQPPKEIMQSYI"
BASE COUNT         3730 a         1239 c         1820 g         3257 t
ORIGIN      
        1 atttatattg tgatcaatat acaggttatg ttttaaatgc gacagtatct ctttatgtgc
       61 attgtacttt gacagaaaga aatgatcaaa aaatcatttt tgactcttct gatactggca
      121 taaaagtaga gtatcaaagt aaagagtttt tagaaaatga tggtaaatta gatctttaca
      181 aagcgattta taatcgcttg ataaaagact atattaaaag acctttaagt ttttctttgc
      241 acacttattc agatgtacca agtggtagtg gactaggggg tagttctact ttggtagtag
      301 gtatcatcaa agcatttgca gaatggctca atcttccttt aggtgagtat gaaatcgctc
      361 gtttggctta tgagatagaa agggaagata tggctatagt agggggtgcg caagatcaat
      421 acgctgcgac ttttggtgga tttaatttta tggaatttta tgatcaaaaa agagttatag
      481 tcaatccttt acgcattaaa aactggatag caagtgagct tgaagctaga gttttacttt
      541 attttacgaa tatcactaga gaagcaaaag atatagaaga gcataaaaaa ggaaaactag
      601 gagatgaaaa ttcgcttaat gccatgcatg cgataaaaca agatgcgtta gatatgaaag
      661 aggctttatt tagagctgat tttgaaaaaa tagcacaaat tttaggtaaa tcttggcaat
      721 caaaaaagat tatttctgaa attgttagca atgatgagct tgaaaggatt tatcatttag
      781 ctatggaaaa tggtgcttat agtggcaaga caagcggagc aggtgctgga ggatttatgt
      841 tttttatggt agatcctgtg aaaaaatata agcttaaaaa aattttaaat gaacagcaag
      901 ggtatgtaca ggaattttat tttacaaaag agggggcaaa atcatggaaa atttaaacct
      961 atatataaaa tctcatttta gtgattcgat tgatgttaaa gataaaatat taaatgatga
     1021 taatataatc aatttgatca aagaagtatc tttaaaagtt atcagtgctt acaaaaatgg
     1081 ccataaaacc ttactagcag gcaatggagg aagcgcagct gatgcacagc acatagcagg
     1141 ggagtttgta agtagatttt actttgatag accaggtatt gcaagtatag ctttaacaac
     1201 ggatactagt atattaacag ctattggcaa tgattatggc tatgaaaatt tatttgctag
     1261 acaggtgcaa gctcaaggtg tgagtgggga tgtttttata ggaatttcta caagtggaaa
     1321 tagtaaaaac atcttaaaag ctttggatgt ttgtaaagaa aaaggaattt taagcatagg
     1381 tttaaccgga gctagtggcg gagctatgaa tgaactttgt gattattgta tcaaagtgcc
     1441 atcatcttgt acgccaagaa ttcaagaagc acatattttg atagggcata ttatctgtgc
     1501 tatagtagaa gaagagcttt ttggcaaggg gtttgattgc aagctatagt tttagctggg
     1561 ggtcttggca ctaggcttag aagtgtagtg caagatcttc caaagcctat ggcaccgatc
     1621 aatggaaaac cctttttagc ttttgtttta gagtatttga aaaagcaagg aattactgag
     1681 attattctaa gtgtttcgta taaatatgaa ctgattcaag agtattttaa agatgaattt
     1741 catggtatga aaatacacta taacatcgaa aaagagcttt tgggtacagg tggagctata
     1801 aaagatgctt taaaattggt aaaaaatgaa gcctatgttg taaatggaga tacttttttt
     1861 gacattgatt taaaaaagct tgttttaaac agtagtaaaa tttgtatagc tttaaaacaa
     1921 atgcaaaatt ttgatagata tggtacggtc aatgttgatg agcaaggtat tgtgacatct
     1981 tttgaagaaa aggtgtttaa aaagcagggt ttaatcaatg gtggcgtata cttgctaaaa
     2041 aaagatattt ttaataattt tagtttagag aggaaatttt cttttgaaga gttcttgcaa
     2101 gaaaactata aattattaaa aatacaaacc caaatttttg atgattattt tatagatatt
     2161 ggcatacctg aagattatat aaaatttatt aagttaagaa agtaacaagg aaaaatatga
     2221 ctgcttatat acatatagga acaccaaaaa ccggaactac aagtattcaa aaatttataa
     2281 cactgaatct cgatttattt ttgcaacaag gaatggtcta tccaaaaact ttttgtgtaa
     2341 ataatcagca tgataaaatt gcatatatta ttaaaaatat gaaatctgat tttaattttt
     2401 ggttgaatca agaggtggta tttttaagaa atgaaatatc agagaataag aaatatactt
     2461 tcttattctc tagcgaaatg ataagtttat atattaatga aagttatact ttaatacgtt
     2521 taaaagagct atttaattgg ctagggttta aaaatataaa atgtattctg tatctaagaa
     2581 gcaatgatga atatatgata tctcattcat ctcaaaatat taaatgtggt ttaggtgtct
     2641 attataaaag aaaggcagaa ttttgcactt ctatgggaat gcatatgtat aaaacaatat
     2701 gtaagaatta tattaatgtg tttggcaaag aaaatatcat tgtcagatta tttgataaaa
     2761 atgaatttta tcaaggagat ttattaaaag attttataca tagtataggt ttggaatggg
     2821 ataataaatt tcgaattcca gaaagggaaa acgaaacttt agatttgatt ggatttgagc
     2881 ttcaaggaag gttaaataaa ttaggttgtg gctggaataa taaaattaat tctactatgg
     2941 aattttcaga aaaatatttt acttccaaag atcctcatct taaattccaa cctgcaaaag
     3001 aagtaacaca atcctatatg gattatttcg aagaatcaaa tgaatgggta agacaagagt
     3061 tctttcctca taaagaaaga ttgtttccta agaaagattt aagtaattat aaagaaaatt
     3121 atgaacttaa agaaatgaaa ccagaatatt gggataaaat agctgaattt atagctgata
     3181 tcgttaaaac caaaaaccaa gctattcaaa ataaggacaa tcaaatcgca actataaaca
     3241 atgaaaaaca aaaattaatt gatgaaaaat taaatttgca aatccaaata aatcaacttc
     3301 aaaacactct aaatactcta cctataaaaa aacagcaact cgaaatttcc aatctagaac
     3361 aagacttaat taataaaaaa ttaaatgcta aagagactaa tcagaatatt ttgattaaag
     3421 aattagaaat taaaaaacta gaacaagaat taaatatcaa ccaggctttt tcatatatac
     3481 caaaagaaca gagcgctaaa caaagaatac aaaaccaact ttcctataag ttaggacaag
     3541 ctatgatagt taattctaaa tctttactag gttatataag aatgcctttt gtattatctt
     3601 atataaaaga taaacacaaa caagaacaaa aaatttatca agaaaaaata aaaaaagatc
     3661 cttctttaaa actacctcct ttagaatctt accctgatta caaagaagct ttaaaagaaa
     3721 aagagtgttt aacctataaa ctaggtgaag ctttgataag agcaaataat aattggtatg
     3781 ggggggtata tcaaattgtg gtttgagatt aggaagctaa aaagagaatt tagaaaaaag
     3841 gctaaccatg cttagtcaaa ttaccttaaa agatataaac gatatagcca taaaagcagg
     3901 taagagtgtc ttaaaaattt acaatcaaga ttttaaaatt tcttataaag atgataattc
     3961 gcctttaagt gaagcagatt tgatctcaaa tgaaattatt tgcaaagagc ttgctaaatt
     4021 tagcctccct atactttcag aagaaaataa aacactacct tatgagcaaa gaaaagattg
     4081 ggaatatttt tggtgtgtag atcctataga cggcaccaaa gaatttatca acaaaaatgg
     4141 agaatttacc ataaacattg ctttagttta taaagatact ccagtattgg gcgtagtgta
     4201 cgctccagcc cttgagcttt tatacagtgc taaaaaaggt gaaggtgctt ttaaaaatgg
     4261 tgtaaaatta cccttgcaaa gaaatgataa ctttttaaaa atagtcgcta gcaaatccca
     4321 tctaaacgaa caaacaaaag attttatcga tagtatccaa gcgaccaagc aaaaagaatt
     4381 tgtttccatg ggcagctctt taaagctttg tctagtagct agcaatgaag cagatattta
     4441 cccaaggcta gctcctacca tggagtggga tacagcagcc gctgatgcta tagttaggga
     4501 agtgggtaaa atgacttatg attttgacac ccaaaaacct ttagtgtata ataaagaaaa
     4561 tttattaaat ctatatttta tagtaaagta gaaaaatgac ccatttagac tttttagaat
     4621 cagagtccat ccatatcatc cgtgaagttg tagctgagtt tgaaaaacca gctatgcttt
     4681 atagcgtagg caaagatagt tcagtgatgc ttcatctttt gcaaaaagca ttttatcccg
     4741 ctgtgccacc acttcctttg gtgcatgtag acactacatg gaaatttaaa gaaatgatag
     4801 aatttagaga taaaagagcc aaagagcttg gtatggagct tatcgtttat caaaacccta
     4861 agattaaaga attaaacctt tctcccttta cacatggctc atctatgcac actgacatct
     4921 ctaaaactca aggcttaaaa caaatgcttg atttgtatca attcgatgca gtttttggtg
     4981 gagcaagaag agatgaggaa aaatcacgtg caaaagaaag aatttactcc tttcgagatg
     5041 aaaatcactc gtgggatcct aaaaatcaac gcccagaatt gtggaatatt tacaatggcc
     5101 gccacaaaaa aggcgagtct ataagggttt ttccgctgag caattggact gagcttgata
     5161 tatggcagta tatttataaa gaaaatattc ctataccaag tctttatttt gctaaaaagc
     5221 gcccagtgat agaatatatg ggggctaaaa ttttagtcga tgatgataga atgccaaaag
     5281 agcttgctaa aaatgctaaa gaagaattgg ttcgttttag gactttagga tgttatcctt
     5341 taaccggagc tataaattcc aatgctagca atgtcttgga aatcatcgaa gaacttttac
     5401 tttctaagac aagtgaaaga caaggcagac ttatagatac tgatgaagaa gcaagtatgg
     5461 aaaaaaagaa aaaagagggg tatttttaat gcaaacaaat atagaaaaat atctccaaga
     5521 gcatgaaaat aaagagcttt gtagatttat cacttgtggc agtgtagatg atggtaaatc
     5581 cacgcttata ggtagaatgc tttatgattc aaaaatgctt tttgaagatc aaattttatc
     5641 tttagaaaaa gacagtaaaa aacttggcaa tgcaggagaa aagcttgatt ttgcactttt
     5701 agtagatggg cttgcaagtg agcgtgagca aggcattact atagatgtgg cttatcgttt
     5761 ttttacaagt gaaaaaagaa aattcatcat agcagatact ccaggccatg aacaatacac
     5821 tagaaacatg gcaacaggtg ctagcacagc tgatattgcc atcatactta tagatgctag
     5881 aaaaggggtt ttaactcaaa ctaaaaggca ttcttatata gtaagtttgc tcggtataaa
     5941 gcaatttatc attgctatta acaaaatgga tttggtggat tttagacaag atatttttga
     6001 tgatatttgc aaaagttata aagaaatttt gccttatttg aaaaactatg aaaatataca
     6061 aactcatttt gtgccaatat ctgccttaga tggagacaat atagcttcta aaagcattaa
     6121 tatgccttgg tatgatggaa aaaccttatc tgagctttta gatactttgc ctattgttac
     6181 taatttaagc gatgagttta tcatgagtgt gcaatatgtc aatcgtcctc atttaaattt
     6241 tagaggtttt tgtggaaata ttgcgagtgg tagtataaat gttaaagatg aagttgtgat
     6301 tttaccttct ttaaaaacaa gtaaagtaaa acaaatcatc acacctagta ttaaaaactt
     6361 gaatgtatcc gataaaaatg aaaaaaatca aagtgctaaa aatgctagct ttccaagtgc
     6421 tataacttta actttagaag atgagataga catttcaaga ggcgatgcaa tggcttctaa
     6481 aaatcatagc atagaaattt caaattcttt taaagctatg gtaatatgga tgagtgaagc
     6541 gaagtttagt ttaaatggaa actatcttat aaagatagct aatttaacca ctagtataac
     6601 atttgaaaag attgactata aaaaagatat caataccttt gaagagtttc aaagtgacga
     6661 attaaaactc aatgatattg ctaaatgtac cctaaggctt agtaaaaaga cagctttagc
     6721 agcctataag gacaataaaa ctttaggaag ttttatcatt atagataaat actctaatga
     6781 aactctagcc gctggtatgg tagaagaaat tttagcaagc gaagaaaaga gtagaattta
     6841 cactcaagca gaaatagaac ttaatgctta cattagaaaa aactatcctg aatgggaatg
     6901 taaaaaaata tgaaaattat tgttgcatta agtattttaa tcttgcttat tttattaatt
     6961 agtaataaaa ttaaaccttt tattttattt ggtagtgtag ctgtgcttta ttatcttttg
     7021 gggtatttaa atttaaacac ctggcttagc tcttatacga gcgaatcttt gatagtgctt
     7081 attttgcttt tgttagtttc actagcgata gaaaaaagtg cagttatcgc ttggtgttct
     7141 aaatttatca taggaaaaaa ttatcattta tcgcttttaa aacttggtgt tattacggct
     7201 agtatttcag catttttaaa caatactgca gtagtagcaa gttttatgag tattataaaa
     7261 aacaataaat ttcaagctcc ttctaagcta cttatcccgc tttcatattt ttctatagtc
     7321 ggtggcacga tgactcttat aggtacttca accaatttaa tagttaattc ttttgtagtg
     7381 caaaatggtt tacaaagttt aaaaattttc gatttttttg cagtgggttt ttgtataagc
     7441 gtgagcgtgc ttatagtgct tttgattttt agctttttat tgcctaatta tcaagaaaaa
     7501 gataatgaga ttaatgagta tttgatcaat gctaaggtgt taaaaaatag ttctttgata
     7561 ggaaaaacca tacaagaaaa tggtctaaga aatttggagt ttttgttttt atttgaaatt
     7621 caaaggcaag atgagatcat ttctccagta agtcatgatg agattataaa agaaggtgat
     7681 gtgttgattt ttagtggaga tataactcat ctagaaactt taaaaaaatt tgatggctta
     7741 caaatgggtg ctcaagagat caagcttgaa acattaaatt tagtagatgt ggtgataaat
     7801 tctgagtcaa gcttgatagg taaaagcgta aaagaggcta attttagggc taaatttgat
     7861 gcggggattg tagctttaaa aagaggctct caaaatattt ccaagatagg taaaagcgta
     7921 ttgcaagctg gagatagact tatcttaagc gtgggtaagg attttcactc aagggataat
     7981 atcaacaaaa acttttatat catttcaaat attattcaaa atcaaaaact aagcaatgtc
     8041 caaagtttta tagtggtatt tgtatttttg gctatcattg ctttatcagc cttagagata
     8101 gtatctttgc ttaaagcatt gttagtattt ttagcttttt tgtttgtatt taaaattata
     8161 agttttgatg agataaaaag acgctttcct ttagaaattt ttatcatagt aggatcttct
     8221 ttggctatta caaaggtttt ggtcgatagt ggattggcta aggattttgc tgatttgatt
     8281 ataggaactt ttggagcata tggactttat ggaagttttg tggggattta tcttttaacc
     8341 ctgcttttaa ccgagatcat taccaataac gctgctgcag ctctagcttt tcctatcgct
     8401 tatagcacag ctttagcgct tgaagtaaat ccggttccat ttatcttagc agttgcttat
     8461 ggggcaagtt gtggttttat gatgcctcat ggttatcaaa ctcatctcat ggtaggatcg
     8521 atttgcggat ataaaactac tgattttgta aagattggct ggatagtttc tttgacatat
     8581 tcggctatgg ttttgatcat gactccgata ttttttaaat tttaaggcta aaaaatggat
     8641 aataatctca cttggcatac aagtagcatt actaaagctc aaagagctaa acttaaaaaa
     8701 caaaaacctc gtgtgttgtg gtttacggga ttaagcggaa gtggtaaatc cactttggcc
     8761 aatgcagtgg agaaaaaact ttttgagcaa gattttcata cttatctttt agatggagat
     8821 aatgtacgcc atggacttaa tggtgatttg ggatttgatg aagcttcaag agtagaaaat
     8881 ataaggcgta taggagagct ttgtaagctt tttatggatg ctggtatgat agtgctttgt
     8941 gcttttatat ccccttttga aaaagataga aaactagtta aagatctttt agaagaggat
     9001 gaatatatag aaatatttgt cgatacttct ttggaagttt gtgaaaaaag ggatccaaaa
     9061 ggactttata aaaaagcaag aaacggagag attaaaaatt ttacaggtat agatagccct
     9121 tatgaaaaac ctaaaaatcc acatatacat ataataaaag aagatcttaa tgaaaatgtg
     9181 gatatgattt tgagattttt aaatgggaag tataaatgac tgcttatgtg catataggga
     9241 ctatgaaaac agggacttca agtatacaaa atttcttata tttaaatcgt agtttattgc
     9301 aaaaacagaa ttattattat cccattagta taaaaaacat tggtagattg aatgatcata
     9361 atccttttgc gcacaaattt aatactttat taaataagac agatgatttg aaaatatttt
     9421 ctagggaatt taagaattta aataatgaaa ttaagatgtg taattgtgat aaaattatta
     9481 tttctatgga aaatgtacaa tggttattga attctcaaca aaaaataaaa tatttttatg
     9541 attttctaat atatattttc gataatataa aaattattgt atatttaaga gatgttgctg
     9601 agttgtttat atctatgtgt tcacaggcta tcaaggatga tagtcatttg gactatcatt
     9661 ttttatatcc ttaccaaaac aaaaaatcaa aaattttaag cgattataaa caaacactac
     9721 agtggtgggg agaaattttt ggtaaagaaa atttaattgt aagactgttt aataaaaatg
     9781 aattttatcg aggagattta ttaaaagact ttatatatag tgtagatttg aaatgggatg
     9841 agaaatttca aattccaata aaagagaatg aaactttgga tttaatagga tttgagcttt
     9901 taagtagggt taatagatta aaacctttta tgtttaaaag tagatatttt gatatagttg
     9961 agtattttga tagaaattgt acaaatgtaa aacaatattc tcatcttaaa tttcagcctc
    10021 caaaagaaat aatgcagtct tatata
//
LOCUS       DAQUWA010000063         9865 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.063, whole genome shotgun sequence.
ACCESSION   DAQUWA010000063 DAQUWA010000000
VERSION     DAQUWA010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9865
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.063"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            141..452
                     /locus_tag="R8X70_001463"
     CDS             141..452
                     /locus_tag="R8X70_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929224.1"
                     /translation="MVVKDIQTTSSSMFSATTKVKEKSTSADEFQATLNEVKNKEEKE
                     DKKTSSSEFTNEDLDLSAVKEDFKSYAWQKMREDQYKKNEEDLLNKLFATIDAGNTAK
                     I"
     gene            600..1622
                     /locus_tag="R8X70_001464"
     CDS             600..1622
                     /locus_tag="R8X70_001464"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEF2929225.1"
                     /translation="MIFIDACFKKPTPYTPVWMMRQAGRYLPEYMKVRQEAGDFLSLC
                     KDYKRASEVSLQPVDILGVDAAIIFSDILVVPLEMGMNLRFEKGEGPVFQTPISTLED
                     LNKLDDQNAYKKLNYVYDALKLTREKLPLDKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKMLYQNPELLHEILNKLTQVLKSYLEEQIKAGVNAVQIFDSWASALECDKFFDFSF
                     KYMLEISDFIKNKYPHIPVILFPKGISGYLDKIDGNFDVFGVDWSTPLDLARDKLSHQ
                     YTLQGNMEPCRLYDKKAIKQGVENILEIMQNKAHIFNLGHGILPDIPVENAKYFIQLV
                     QESSAK"
     gene            1619..2521
                     /locus_tag="R8X70_001465"
     CDS             1619..2521
                     /locus_tag="R8X70_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEF2929226.1"
                     /translation="MKILFGPINSRRFGRSLGIDLSPSKKQCNFDCVYCELEAQKPQE
                     KQDEIVSVEEIILEVQGALEKNVPFDFLTLTANGEPSLYPHLDELISSLRKIAKDKKL
                     LILSNGTVVLDQDKFNTLLKLDVVKFSLDSAISKTFYRIDRALKNINLEKMIEKMAEF
                     KTQFKGDLVMEILVVKDLNDNEEEFIALNQALAKIAPLRVDLSTIDRPPAYAVKKISE
                     ERLLELSKLITSTPVLLPKRHYEGEKLNFNEEELLKMLHLRSQSEIDIENKLDKTSQL
                     LLDKLIKEEKIKILNLAGVKFYKA"
     gene            complement(2518..3711)
                     /locus_tag="R8X70_001466"
     CDS             complement(2518..3711)
                     /locus_tag="R8X70_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929227.1"
                     /translation="MLLVWIIFIFNIILAFLSIDFTRIHESLEQIKLTFFASIFILSL
                     TLIFFLFRKKRALARKDQKILLIKNEFIHAEEIDIETSLDLIREKIAHLNQDLFKISH
                     EKETYAKLLEDSLYQIGNIEGVVRCLDEEEASKEIKSLVLNALKHQKEQIRLGLNQAL
                     EYHKSIGVAQGNVLQFEASAAIVSDDGLEAFLLANLLSYFGIENTIFKSLSFDINDFH
                     VVFIKDKILEQSSKKADDFIVFGRSKNLYYEYFLSLPFEKKELENILQRKLDKICALK
                     FQTPYQNNVLLFKQNEFDATLFFNIIEKQCSQNMRVNSFSELKKELKKEAYRLILLDY
                     ELIKFDLEQMRSILSAYKKQHPQSHIIFFSRERVRDFDCVSEVLNDISRNDLIALIRK
                     YLPKN"
     gene            complement(3713..5527)
                     /gene="uvrC"
                     /locus_tag="R8X70_001467"
     CDS             complement(3713..5527)
                     /gene="uvrC"
                     /locus_tag="R8X70_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEF2929228.1"
                     /translation="MAEILLKNTLKEELQTLPANAGVYQYFNAEGKLLYVGKAKNLKN
                     RVRSYFAFTPNLRANPKNSLRIQKMIEEAVHLEFITTNSEADALILENSFIKQLHPKY
                     NILLRDDKTYPYIYVDFNEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYP
                     LKQKASCKSPCIFYQISRCLAPCDKKITQEEYRLILDKAINALLSPSILVKNLEKQMF
                     HLAQNENYEEAAKIRDQIATIRDLEIKVEIDIAKLEDFEIFALACESSMLSTLRFVVQ
                     NGKIISANSKITPLKNNTDFDKNEIYKQLILENFSVDIPLVANTVYVYEDFEDRELLE
                     EILSQRFDKKISIKVPKIGEKRRICDLAFQNACLNIQKEQKNSDFNIQKELKNYFELE
                     NLPNCIEVFDNSHLQGVANVGAMITYKMGTWDKSNYRKFHLKYKNDYEQMREVLTRRA
                     LEFDKMPAPDLWLIDGGKALLDLAKEIILSSGANVDILAISKEKINAKAHRAKGGAKD
                     KIHSLKGEFALSINDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLSSSKLVKSGLSAG
                     VIQKLLAYYGSFEAIYEANFEELCQLVGKKSAQKIKED"
     gene            complement(5520..5996)
                     /locus_tag="R8X70_001468"
     CDS             complement(5520..5996)
                     /locus_tag="R8X70_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929229.1"
                     /translation="MEKFQSPKIIKNTSAILNDLMSKSHYRPLKTLFFCKDFLNSFPP
                     AKQRLIARIYIKNHILNIVTLNSAAYQELNHDNSKIYIKVLIKKYGKMYPLSGFSDIK
                     DLKIFTQKYNNTIKNNENFTAKKPYIELSLGKFENKFENKILAKKFEEIRQMIRNG"
     gene            6133..7668
                     /gene="guaA"
                     /locus_tag="R8X70_001469"
     CDS             6133..7668
                     /gene="guaA"
                     /locus_tag="R8X70_001469"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEF2929230.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKA
                     KEPKGIILSGGPASVYATDAYFCDKEVFNLGLPILGICYGMQLMAHHYKANVAPAGHK
                     EYGKASIEIQKDSDLFKNLPKKQIVWMSHSDKVENLPQDFEVLATSENSPYCVFANEE
                     KKFFALQFHPEVQHSEFGKSILKNFAKYACNCESIWNMGSFAKTQAEKIREEVGKDKV
                     LCAVSGGVDSSVVAALLANAIKDQVIVVFVDNGLLRSDEKEQVEFMFKNTLGINLISI
                     DASKIFLDRLAGVTDPEQKRKIIGNTFIEIFEEEAKKHKDVKFLAQGTLYTDIIESSV
                     IGASKTIKSHHNVGGLPEKMNLKLVEPLKEIFKDEVRALGIELGLSKEIVYRHPFPGP
                     GLAIRIMGEVNRPSLELLRKADVILLEELRSTGWYNKTWQAFCVLLNVKSVGVMGDNR
                     TYDNTICVRVVDASDGMTATFSHIPYEILENISRRIINEVEGINRVVYDISSKPPATI
                     EWE"
     gene            7843..8400
                     /locus_tag="R8X70_001470"
     CDS             7843..8400
                     /locus_tag="R8X70_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEF2929231.1"
                     /translation="MENSIKDSYNKICKKWSEFRKNTSINQCIVDFANNLSPNSRVLD
                     IGCGTGYPIALYLSKQGFQVTGIDISEEMIKQAQKLNLHNATFLVEDILNFKTDKKYD
                     AIIAFDSIWHIRYDKQECIYQIISSLLTSGGLFLFTHGKNDGEIISTMWKESFYHSAL
                     DLEKVRESHSLIEASASQLKPSNLS"
     gene            complement(8393..9631)
                     /locus_tag="R8X70_001471"
     CDS             complement(8393..9631)
                     /locus_tag="R8X70_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEF2929232.1"
                     /translation="MQITKGFKYRIYPNLEQQKLLNHQFFIYNQAYNIILDLQKKQMQ
                     INKNLDKSQRTYLTAVQLDNKVKEILRQRELAFKSVVTQQARINLLRALKDKTKGFPK
                     FKNSKFAKQSFNWNNQGYQIKDSNNPKFKIFHLMKLPLKMRYHKDLPQNYKLNQITIS
                     KSHNKYFVSFSITYENPSVSLISSQNLDIKKAVGIDLNINEIALSSGRLIKTNSKLIS
                     KAKYDNAFKRLQRKQSRRVLRAKKEKVKLGANFFKTQIELNRIYEKASNIKKDLQHKI
                     TSQIVNDFDLIAVEALQTKNMTKRAKLKNVKVKSGLNKSILDTSFYQFLSFLEYKTSH
                     NGKIFTKIPPQYTSKTCSKCGSIKADLRLSDRIYICKECGNEMHRDINASINILNRAL
                     ESFELGINSLDYKQQALCVS"
     gene            complement(9618..>9865)
                     /gene="tnpA"
                     /locus_tag="R8X70_001472"
     CDS             complement(9618..>9865)
                     /gene="tnpA"
                     /locus_tag="R8X70_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_048813205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEF2929233.1"
                     /translation="LLKFINAYKSASSRLIKKEFPHLKQYLWKQYFWSGSYFLATTGG
                     VTLDILKQYVENQGIEDNRVKKQYKNTKRKRLLNANN"
BASE COUNT         3433 a         1517 c         1471 g         3444 t
ORIGIN      
        1 aacaaattaa caaaactgtg aaaactcctt ttactttttg ataaatgatc aaaaattttc
       61 taaaaaatta tccaaaattt ataaattgga ataaaaattg cttatctaat ttaaaatcaa
      121 aaaaacaaaa ggaggagaaa atggtggtaa aagatatcca aacaacttca agctctatgt
      181 ttagtgctac aaccaaggtt aaggaaaaaa gcacttcagc agatgaattt caagctactc
      241 taaatgaagt taaaaacaaa gaagaaaaag aagacaaaaa gacaagttca agtgaattta
      301 ctaatgaaga tcttgatctt agtgctgtta aagaagattt taaatcttat gcttggcaaa
      361 aaatgagaga agatcaatac aaaaaaaatg aagaagattt actcaataaa ctttttgcaa
      421 ccattgatgc gggaaatact gctaaaatat aaatttaaaa tttcattgcg agaatttttc
      481 aattctcgta taaatttata aaacaccaaa ataagacaat cacaaatctt tcatacaaca
      541 aaacacattt atttttatta atttctgtta taattttatg aaaaaaacaa aggaaaatta
      601 tgatttttat cgacgcttgc tttaaaaaac ctacacccta tacacccgtt tggatgatgc
      661 gtcaagcagg aagatatttg cctgaatata tgaaagttag acaagaagcg ggagattttt
      721 tatccttatg taaagactac aaaagagctt cggaggtttc tttacaacct gttgatattt
      781 taggagttga tgcggcgatt atcttttcag acattttagt agtccctctt gaaatgggaa
      841 tgaatttacg ctttgaaaaa ggcgaaggac cggtatttca aacacctatt tcaaccttag
      901 aagaccttaa caagctagat gatcaaaatg cttataaaaa actaaactat gtttatgatg
      961 ctttaaaact aacacgcgaa aaattaccgc ttgataaagc tttgatagga ttttgtggca
     1021 gtccttggac tatagcaact tatatgatag aaggaagcgg aagtaaaaat tatgcaaaat
     1081 gtaaaaaaat gctttatcaa aatccagaac ttttgcatga aattttaaat aaactcactc
     1141 aagttttaaa atcttactta gaagaacaaa tcaaagcagg tgtaaatgcg gtgcaaattt
     1201 ttgatagctg ggcgagtgct ttagaatgtg ataaattctt tgatttttca tttaagtata
     1261 tgcttgaaat ttctgatttt attaaaaaca aataccctca catacctgta attttatttc
     1321 ctaaaggcat tagtggctat ttggataaaa tcgatggaaa ttttgatgtt tttggagttg
     1381 attggagtac tcctcttgat ttagcacgcg ataaattatc ccaccaatac accctacaag
     1441 gcaatatgga accttgcaga ctttatgata aaaaagctat caaacaaggc gtagaaaata
     1501 ttcttgaaat tatgcaaaat aaagctcata ttttcaatct aggtcatgga atcttgcctg
     1561 acattcctgt tgaaaatgca aaatacttta tccagcttgt gcaagaaagt tcagccaaat
     1621 gaaaattctc tttggcccca tcaattcaag acgttttgga agatctttag gtattgatct
     1681 aagccctagc aagaaacaat gcaattttga ttgcgtatat tgcgaacttg aggctcaaaa
     1741 acctcaagaa aaacaagatg agattgtaag cgtagaagaa atcattttag aagttcaagg
     1801 cgctcttgaa aaaaatgtcc catttgactt tcttacctta acagccaatg gggaaccaag
     1861 cctttatcct catttagatg aattgatctc atccttacgc aagattgcta aagataaaaa
     1921 attgctcatt ttaagcaatg gcaccgtggt tttagatcaa gacaaattca ataccttatt
     1981 aaagttagat gtggttaaat ttagcctaga cagtgctatt tctaaaacct tttaccgtat
     2041 tgatagggct ttaaaaaata ttaacttaga aaaaatgata gaaaaaatgg cagaatttaa
     2101 aacccaattt aaaggtgatc ttgtaatgga gatccttgtc gtaaaagatc ttaatgacaa
     2161 tgaagaagaa tttatcgctt taaatcaagc tttagctaaa atagcgccct taagagttga
     2221 tttaagcacc attgatagac ccccagctta tgcggttaaa aaaataagcg aagaaagact
     2281 tttggaactt tccaaactca taacttccac tcccgtgctt ttgcccaaaa gacactatga
     2341 gggtgaaaag ttaaatttta atgaagaaga attgctaaaa atgcttcatc tacgctcaca
     2401 aagtgagata gatatagaaa ataaattaga taaaacttct caacttcttt tagacaagct
     2461 tataaaagaa gaaaaaataa agattcttaa tctagcagga gttaaattct ataaagccta
     2521 atttttaggc aaatattttc taatcaaagc tataagatca tttctgctga tatcatttaa
     2581 aacctcgctt acgcaatcaa aatccctcac cctctcccta gaaaagaata taatatgact
     2641 ttgagggtgt tgctttttat aagcgctaag aatagaacgc atctgctcaa gatcaaattt
     2701 aatcaattca taatcaagca atatcaaacg ataagcttct ttttttaatt cttttttcaa
     2761 ttcactaaaa gaattcacgc gcatattttg ggagcattgt ttttctatga tattaaaaaa
     2821 caaagttgca tcaaactcat tttgtttaaa aagcaaaaca ttattttgat aaggagtttg
     2881 aaattttaaa gcacaaattt tatcaagttt tctttgcaaa atattttcaa gctctttttt
     2941 ttcaaaaggt aggcttaaaa aatactcata atataagttt ttactacgcc caaacacgat
     3001 aaaatcatca gccttcttag aactttgctc taaaatttta tccttaatga aaaccacatg
     3061 aaaatcattg atatcaaaac tcaaactctt aaaaatagta ttttctatgc caaaataaga
     3121 caacaaattt gctagcaaaa atgcttcaag cccatcatca cttactatcg cagcacttgc
     3181 ttcaaattgc aaaacattgc cctgtgccac ccctatgctt ttatggtatt ctaaagcttg
     3241 attaagtcca agtctaattt gttctttttg atgttttaat gcatttaaaa caagtgattt
     3301 gatttccttg cttgcttctt cttcatctaa acatcttaca acgccctcaa tattgccaat
     3361 ttgatacaaa ctatcctcta gcaattttgc ataagtttct ttttcatgag aaatcttaaa
     3421 taaatcttga tttaaatgtg ctattttttc ccgaatcaaa tccaaactcg tttcgatatc
     3481 tatctcttca gcatgtataa attcattttt aattaataaa attttttgat ctttcctagc
     3541 caaagctcgt ttttttcgaa aaaggaaaaa tattaaagtt aaagacaaaa taaaaatact
     3601 agcaaaaaaa gtaagtttaa tttgctcaag gctttcatga attcttgtaa aatctatact
     3661 taaaaaagcc aaaataatat taaaaataaa aataatccaa accaataaca aatcaatctt
     3721 cctttatttt ttgtgctgat ttttttccta ctaattggca caattcttca aaatttgcct
     3781 cataaatagc ttcaaaactt ccataatacg ccaaaagttt ttgtataact cccgcactaa
     3841 gtcctgattt tacaagctta gagcttgata aatcttgttt tttcttagtg ttttgatgaa
     3901 aacttatggc aaaacgatgt gcttcatctc ttaatttctg taagaattgt aattttttat
     3961 cgttaatgct tagggcaaat tctcctttta aagagtgaat tttatcttta gcccctcctt
     4021 tagcgcggtg agctttagca ttgatttttt cttttgagat tgctaaaata tcaacatttg
     4081 ccccactact taagatgatt tctttagcta aatcaagcaa agcctttccc ccatctataa
     4141 gccacaaatc aggagcaggc attttgtcaa attctaatgc tctacgcgtt aaaacttcac
     4201 gcatttgctc ataatcattt ttgtatttta aatgaaattt tctataattt gacttatccc
     4261 aagtacccat tttataagtt atcatagctc ctacattcgc cacaccttgc aaatgagaat
     4321 tatcaaaaac ttctatacaa tttggcagat tttcaagctc gaaataattt ttaagttctt
     4381 tttgtatatt aaaatcacta tttttttgct ctttttgtat atttaaacac gcattttgaa
     4441 atgccaaatc acaaattctt cttttttccc ctattttagg aactttaatg ctgatttttt
     4501 tatcaaatct ctggcttaaa atttcttcta aaagctccct gtcttcaaaa tcctcataaa
     4561 cataaacagt atttgcaacc aaaggaatgt ctacgctaaa attttctaaa ataagctgtt
     4621 tataaatctc atttttatca aaatctgtat tgtttttaag cggagtgatt ttagaattag
     4681 cgctgatgat ttttccattt tgcaccacaa aacgcaaagt tgaaagcata gagctttcac
     4741 aagctaaagc aaaaatttca aagtcttcta atttagcgat atcaatctca actttaattt
     4801 ccaaatccct tatcgtagca atctgatctc ttatttttgc cgcttcttca taattctcat
     4861 tttgggctaa atgaaacatt tgtttttcca aatttttcac taaaatacta gggcttaaaa
     4921 gagcattgat agctttatct aaaatcaaac gatattcttc ttgggtaatt tttttatcac
     4981 aaggcgcaag acaacgagaa atttgataaa aaatacaagg agatttacaa cttgcttttt
     5041 gctttaaagg atagtataaa taaagcgcat ctaaaagctc tctagctcct ttaaaaaagg
     5101 ggccaaaata tttgatttta ctttttttaa ctaattttct agtgatttca aaacgcggaa
     5161 attcttcatt aaaatctaca taaatataag gataagtctt atcatctctt agtaaaatat
     5221 tgtattttgg atgaagttgc ttgataaaag aattttccaa aatcaaagca tcagcttctg
     5281 aatttgttgt aataaattcc aaatgcaccg cttcttctat cattttttga attcttaaag
     5341 aattttttgg attggcgcgt aaatttgggg taaaagcaaa ataagatctt acgcggtttt
     5401 taagattttt agccttgcct acatataaaa gctttccttc ggcattaaaa tactgataca
     5461 ctccagcatt tgcaggtagg gtttgaagct cttctttgag agtattttta agtaaaattt
     5521 cagccatttc ttatcatctg ccttatttct tcaaatttct ttgctaaaat tttattttca
     5581 aatttatttt caaattttcc aaggcttaat tctatatagg gttttttagc cgtgaaattt
     5641 tcattatttt ttattgtatt attgtatttt tgtgtaaaaa tttttaaatc ttttatatct
     5701 gaaaatccac tcaaaggata catttttccg tattttttta tgagaacttt aatataaatt
     5761 ttgctattat cgtgatttaa ttcttggtaa gcggctgaat ttaaagtcac tatatttaaa
     5821 atatgatttt ttatataaat tctagcgatt aaacgctgtt tggcaggcgg aaaagaattt
     5881 aaaaaatctt tacaaaaaaa taaggttttt aagggtcgat aatgagactt actcatcaag
     5941 tcattaagaa tggcgctagt atttttaatt atctttggac tttgaaattt ttccataaga
     6001 tgattttagc attttttttc ttaatttttt tgtgtgcatg tggctataag ggcaacccac
     6061 aatacactag ctacgaacaa aatggttcaa taaaaagcat taaaaaatac gaacaattaa
     6121 ataggtggta gaatgaaaaa agcagatatt ttagttttag attttggatc gcaatatact
     6181 cagcttatag caagaagatt gagagagcaa ggcgtttatg ctgagatttt gccttttaat
     6241 gtaagtttag cagatatcaa agcgaaagaa cctaagggta ttattttaag tggtggccct
     6301 gcaagtgttt atgcaacaga tgcgtacttt tgtgataaag aggtttttaa tctaggctta
     6361 cccatacttg gaatttgtta tggtatgcaa ctcatggctc atcattataa agccaatgtt
     6421 gctccagcag gacacaaaga atacggcaaa gcaagtatag aaattcaaaa agatagcgat
     6481 ttgtttaaaa atctacctaa aaaacaaatc gtttggatga gtcattctga taaggttgaa
     6541 aatttaccac aagattttga agttttagca acaagtgaaa atagtccgta ttgtgttttt
     6601 gcaaatgaag agaaaaaatt ctttgccttg caatttcacc ctgaagtaca acacagtgaa
     6661 tttggcaaaa gcatcttgaa aaattttgca aaatatgctt gcaattgcga aagtatttgg
     6721 aatatgggat cttttgcaaa aactcaagct gaaaaaattc gcgaagaagt gggcaaagat
     6781 aaagttcttt gtgctgtaag cggcggggta gatagcagtg tcgtagcagc cttactagca
     6841 aatgcaatca aagatcaagt tatagtagtt tttgtagata atggactttt aagaagtgac
     6901 gaaaaagaac aagttgaatt tatgtttaaa aacactttag ggattaatct tataagcatt
     6961 gatgcaagca agattttcct agatcgctta gcaggagtta ctgatcctga gcaaaaacgc
     7021 aaaatcatag gcaatacctt tatagaaatt tttgaagaag aagctaaaaa acacaaagat
     7081 gtgaaatttt tagctcaagg cacactttat actgatatca tagaaagttc ggttataggt
     7141 gcaagcaaaa ctatcaaaag ccaccacaat gtaggtggat tgcctgaaaa gatgaatctt
     7201 aaacttgttg agccattaaa agaaattttt aaagacgaag tgcgtgcttt aggtatcgag
     7261 cttggattaa gcaaagaaat agtttatcgc catcctttcc caggccctgg tcttgctata
     7321 cgcatcatgg gagaagtcaa tcgcccaagt cttgaattac tacgcaaagc agatgtaatc
     7381 ttacttgaag aactaagaag cacaggttgg tataataaaa cttggcaagc tttttgtgta
     7441 ttgttaaatg taaaaagcgt tggtgttatg ggagataacc gaacttatga taataccatt
     7501 tgtgttcgtg ttgttgatgc aagtgatgga atgacagcga ctttttcaca cataccttat
     7561 gaaattttag aaaatatctc gcgtcgtatt atcaatgagg ttgaaggtat taaccgcgta
     7621 gtttatgata tctcaagtaa accacctgca actatagaat gggaataaat taaaaaatct
     7681 gaaaacctga taataatata caggttttca agaatttaaa accctcatta acaaattttt
     7741 aatacataaa aaactagcat ataaagtcat agaaaaagct tatattaaat gtattaattt
     7801 tattataaaa atcaaagagt gttaaaattt ttaggaatat ggatggaaaa tagcataaaa
     7861 gattcataca ataaaatttg taaaaagtgg agtgaatttc gcaaaaatac ctcaatcaat
     7921 caatgcattg tcgacttcgc aaataattta agtccaaatt caagagtgct agatattggt
     7981 tgtggaactg gatatcctat cgctttatat ttatcaaaac aaggatttca agttacaggg
     8041 atagatattt cagaagaaat gataaaacaa gcacaaaaac ttaacttaca taatgccact
     8101 tttttagtag aggatatttt aaatttcaaa acagataaaa aatatgatgc aatcatcgca
     8161 tttgattcta tttggcacat taggtatgat aaacaagaat gtatttatca aatcatttct
     8221 tctttgttga catctggtgg attgttttta tttactcatg gaaaaaatga tggcgaaatt
     8281 ataagcacaa tgtggaaaga atcattttat catagtgctt tagatttaga aaaagtacgt
     8341 gaatcacact cgcttataga agcgagtgct tcccaattaa agccaagtaa ccttagctaa
     8401 cacaaagggc ttgttgttta tagtctaacg agttaattcc tagctcaaac gactctaagg
     8461 cacgatttaa gatatttata cttgcgttta tatctctgtg catttcattg ccacactctt
     8521 tgcaaatata gattctatca ctaagtctta aatcagcttt tatgcttcca catttgctac
     8581 aagttttact tgtgtattgt ggtggtattt tagtaaatat tttgccgtta tgcgaagttt
     8641 tgtattctaa aaagcttaaa aattgataga atgaagtatc tagtattgat ttattcaaac
     8701 cactttttac ttttacattt tttagcttgg ctctttttgt catatttttg gtttgcaatg
     8761 cttcaactgc tatcaaatca aaatcattta ctatttgact tgtaatttta tgctgtaaat
     8821 cttttttgat attactagct ttttcgtaaa ttctatttag ttcaatttga gttttaaaga
     8881 aatttgcacc taattttacc ttttcttttt tagctcttaa aactctcctt gattgctttc
     8941 tttggagtct tttaaaggca ttatcatatt tggctttgct tattagcttt gaattagttt
     9001 taataagtct gccactgctt aaagcaattt cattgatatt taaatcaatt cctactgctt
     9061 ttttaatatc taaattttgg ctagatatta aagaaacact aggattttca taagttatac
     9121 taaatgagac aaagtattta ttatgagact ttgagattgt gatttgattt agcttataat
     9181 tttgtggcaa atctttgtga taacgcatct ttaaaggcaa tttcataaga tgaaatattt
     9241 taaattttgg attattacta tctttgattt gataaccttg attattccaa ttaaagcttt
     9301 gtttggcaaa tttggagttt ttaaatttag gaaagccttt tgttttatct tttaaagctc
     9361 ttaaaagatt tattctagct tgttgagtaa cgacactctt aaacgctaac tccctttgcc
     9421 ttaaaatctc ttttactttg ttatctaatt gcacggcagt taaataagtt ctttgtgatt
     9481 tatctaaatt tttgtttatt tgcatttgct ttttttgcaa atctaaaatg atattatagg
     9541 cttgattata aatgaaaaat tgatgattta aaagtttttg ttgctctaaa tttggatata
     9601 tacgatactt aaagccttta gttatttgca tttaagagcc ttttacgctt tgtgtttttg
     9661 tattgttttt ttactctatt atcttctatg ccttgatttt ctacatattg ttttaaaata
     9721 tcaagtgtaa ctccgcctgt cgtagccaaa aaataacttc cactccaaaa gtattgcttc
     9781 cacaaatact gctttaaatg tggaaattct tttttaatca aacgacttga agctgactta
     9841 taggcgttaa tgaattttag aagtt
//
LOCUS       DAQUWA010000064         9818 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.064, whole genome shotgun sequence.
ACCESSION   DAQUWA010000064 DAQUWA010000000
VERSION     DAQUWA010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9818
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.064"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..1165
                     /locus_tag="R8X70_001473"
     CDS             <1..1165
                     /locus_tag="R8X70_001473"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEF2929234.1"
                     /translation="VVRSFTSLVEGVLFGAYKFDKYKSEKKESTLEKFIISAEELNAK
                     KFNLDEAKIGLLRGEILANATNFAKDIVNEIPEIYTPLKMAEDAQNLAKKNKNITCKI
                     CDEKFLAKEKMNAFLAVNRASAHPPRLIHLSYKAKNAKKRIVFVGKGLTYDSGGLSLK
                     PADYMLTMKADKSGAAAAMGIIKAVAELALELEVHCILGATENMIGGNAYKPDDVLIS
                     REGVSIEVRNTDAEGRLVLADCLSYAQDLKPDLLIDMATLTGACVVGLGEFTSGIMGN
                     NEELQNEFYLSSKKSGEYTTILHFNPHLKELIKSNIADVSNSASSRYGGAITAGLFLD
                     KFIRKEYKDKWLHLDIAGPAYIEKSWGYNSFGAGGTGVRMCVNFLIHLLRKNK"
     gene            1162..2265
                     /gene="ychF"
                     /locus_tag="R8X70_001474"
     CDS             1162..2265
                     /gene="ychF"
                     /locus_tag="R8X70_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEF2929235.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPERIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLGKKIEKLNKEARANTKGAK
                     ESLEMANSLLEHLNKGLPASTYLQKEDEIFQALNKELRLLSAKEVIYGANVDENGISE
                     DNEYVKILKDYANKNNHEVIKLCAKIEEELVGLSNEESAEFLSSLGVNESGLDQIIRT
                     AFSKLGLISYFTAGVLEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDFITY
                     KGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV"
     gene            complement(2272..3657)
                     /gene="argH"
                     /locus_tag="R8X70_001475"
     CDS             complement(2272..3657)
                     /gene="argH"
                     /locus_tag="R8X70_001475"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEF2929236.1"
                     /translation="MKNEMWSGRFSEASNELLKEFNASLNIDRALYVEDIQGSIAHAT
                     MLENCRILKKDELEAIVKGLEQVRVEIEQNRFVFNIEDEDIHMAIEKRLSELIGSEIG
                     GRLHTARSRNDQVATDFKLFTKKSHLELIILLKELIQTLLSHARAHKRTIMPSFTHLQ
                     HAQPISFSFYILSYAFMFMRDIKRLQNSLELADFSPLGSCACAGTSYATNRNLSAQIL
                     GFKDIMPNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSASEFGFLTISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGLFDSV
                     KTAKDSLIILNAMLKEVKINEENMLKSCKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEKQGIDISDIEDLSKIDPIFDEKAMKLLDFENSLNSKQSEGSSSVASVEKQI
                     QILEKFLECLG"
     gene            complement(3667..5241)
                     /gene="pckA"
                     /locus_tag="R8X70_001476"
     CDS             complement(3667..5241)
                     /gene="pckA"
                     /locus_tag="R8X70_001476"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEF2929237.1"
                     /translation="MKKFENLGLENIKKVYHNLSFDELYEHEKKNEEGQCTDNGTFTV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQAITKELFDELLMKARKELSNKEIYVQ
                     DVFCGASLKSRKAIRFVTEIAWQAHFVKNMFIRPNDKELDEFKADFIVYNACKCVNKD
                     YEKNGLNSEVFVIFNIEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKGDVALFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPE
                     SEPEIYGAIKRNALLENVVLRSDKSVDYSDASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIDKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     ITQCEFENFDVFNLAIPKTLAGVESSLLNPINTWKDKDEFIATRNKLAKMFSDNFKRY
                     EDVKEGVEYSQFGPKI"
     gene            complement(5250..7043)
                     /locus_tag="R8X70_001477"
     CDS             complement(5250..7043)
                     /locus_tag="R8X70_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HEF2929238.1"
                     /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMQDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFEMMDKFRSIVGKDANLQTLARGVNTVTLDTGSKELID
                     LHAKLFAKHGTTTIRNFDALNDVNNLKFSGECIKKYGLKHEITITLMDLPPNCQGAHD
                     VPFYERILKEILAAEIPFDSICFKDASGTSNPNKIYETIKMARKNLPQDVHIRLHTHE
                     TAGVSIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKGKNYDLGGLEEEKI
                     LKYEAVLKDSLKEYFLPPEATMVSPLIPFSPMPGGALTANTQMMRDNNILDKFPEVIH
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGPWEKIAEGYGKMVLGYFGKTPVEPD
                     AEVKKLAAKQLNLEPTTELAIDIADKDETKSIAYVKSLLEKEGIAVSEENIFIAAACK
                     EKGIAYLKGEAKVNVRKNVSAPKQNSTGIDENKFTVSVNGNKYHVEISAGFDKDVNIK
                     SIHKADTQEDIMQDADSSEGIQAGISGNVFKIYINEGEEVKSGQVVMILEAMKMEIEV
                     SAPKDGIIEKICVKTGDSVSENNLVAIYKNN"
     gene            complement(7066..8415)
                     /locus_tag="R8X70_001478"
     CDS             complement(7066..8415)
                     /locus_tag="R8X70_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEF2929239.1"
                     /translation="MRTYFSKIGFILAVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLSIGFSIFLAEVSMGRLSRSDLANAYYTLAKSHARRWRYGGIFTLGGIFVLSFYL
                     VIMGWVLKYALTSLYYLPKNLEQAGSDFSTLISADLSNSILFFSLSFFLTLLIVSKGL
                     IKGIERLNVVIMPSLFIMLIFMLLYCMSFQNGFKQAFSYLFYPDFSNFKLSSIAEALG
                     LAFFTLCLGIGCIVTYSAALSKKINFIKSSIFIVLINLLISFIMGLIVFTFIFEFEAN
                     PNIQGPGIVFVSLMSLFNELGILGYVLAFCFFLALFFAGITSAVSMIEPLTFYVVNNY
                     KISRIKALSFIGFIVFVLGICCILSLNTHFSSLFSIFGKDFFTLLDKVTSNILLPLGA
                     IVSSIFVGFFVDKKRIYKIFSKFVNRQIFTIWLFFIRFISPIAIICIMCYQIFVKIS"
     gene            complement(8429..9763)
                     /locus_tag="R8X70_001479"
     CDS             complement(8429..9763)
                     /locus_tag="R8X70_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEF2929240.1"
                     /translation="MNSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYAGFTMIGAILIVSFYT
                     LVIGWILKYAYLSISGNLYPDLNTSSAEFGKLISSDFVSQFVCFTLIFLIVFYTVSKG
                     VKNGIEKLNVWMMPALFILLVLMLIYAMTKDGFMMAVEFLFVPDFSKISTSNVLEALG
                     LAFFSLSLGVGTIITYSASLPERTNFITSTLNIIFINLLIGLLMGLVVFTFIFEFGFD
                     ASKEGPGLIFVSLATLFQKLGAIGHILGAAFFISLIFAGITSAVSMIEPFAFYLINSF
                     GMSRKKALILIGIIVYTLGILCILSSLDSTAFKIFGLSVFDLLDTLSSKIIMPLGGIL
                     AAIFVGFVIKKEALQILFGPYMKGIFFELWYIFLRFISPLAVIVVMISAFLK"
BASE COUNT         3506 a         1787 c         1421 g         3104 t
ORIGIN      
        1 cgttgtgaga agttttactt ctttggttga gggtgtgctt tttggagctt ataaatttga
       61 taaatacaaa agcgaaaaaa aagaaagcac tttagaaaaa tttataattt ctgccgaaga
      121 actaaatgct aaaaaattta atctcgatga agcaaaaata ggtcttttac gcggtgaaat
      181 tctagccaat gcgacaaatt ttgccaaaga tatagttaat gaaattcctg aaatttatac
      241 tcctttaaaa atggcggaag atgctcaaaa tttagctaaa aaaaataaaa atatcacatg
      301 caaaatttgc gatgaaaaat ttcttgctaa agaaaaaatg aatgcattct tagctgtcaa
      361 tcgtgcttct gcccatccgc cgcgtctgat ccaccttagc tataaagcta aaaatgctaa
      421 aaagcgtata gtatttgtag gcaaaggctt aacttacgat agtggtggct tgagcctaaa
      481 acctgctgat tatatgctta ctatgaaagc ggataaaagc ggagctgcag ctgcgatggg
      541 aattattaaa gcggttgccg agctcgcttt agaattagaa gtacattgca tcttaggtgc
      601 aactgaaaat atgataggtg gaaacgctta taaaccagat gatgttttaa tttcgcgcga
      661 aggcgtgagt atagaagtaa gaaataccga tgctgaaggg cgtttggttt tagctgattg
      721 tttatcttat gctcaggatt taaaacctga tttactcatt gatatggcga ctcttacagg
      781 agcttgcgtt gtggggcttg gggaatttac aagtggtatt atgggaaata atgaagaatt
      841 gcaaaatgaa ttttatttaa gctctaaaaa aagtggagaa tatacaacca tactacactt
      901 taacccgcat ttaaaagaac ttataaagtc aaatattgct gatgttagta attctgcttc
      961 tagtcgttat ggtggtgcaa ttacagctgg gttattttta gataaattca tacgcaaaga
     1021 atataaagat aaatggctcc accttgacat agcaggacct gcttacatag aaaaatcttg
     1081 gggctataat agctttggtg cgggtggaac aggagttaga atgtgtgtta attttttaat
     1141 tcatctttta aggaaaaata aatgagttta agcgtcggta tagtaggtct tccaaatgtt
     1201 ggaaaatcaa ctacttttaa tgccttaacc aaggcacaaa atgcacaaag tgcaaattat
     1261 cccttttgta ccatagaacc taataaggct atggttgaag ttcctgatct aagattaaat
     1321 gaacttgcca aaattgtaaa acctgaaaga attatgcatt cattgataga atttgtagat
     1381 attgcagggc ttgtaaaagg tgcgagcaag ggcgagggat tgggaaataa gtttctctcc
     1441 aatatacgtg aaacagaagt aattttacac attgtgcgat gttttgatga agaaaacatc
     1501 acccatgttg aaggaggcgt tgatccttta agggatgttg agatcattaa tacagagctt
     1561 attttagcag atatagaaca gcttggtaaa aaaatagaaa aactcaataa agaagctaga
     1621 gcaaatacca aaggtgcaaa agaaagtcta gaaatggcaa attctttgct tgaacattta
     1681 aataaaggtc ttccagctag cacctatttg caaaaagaag atgagatttt tcaagcttta
     1741 aataaagagc taagacttct ttctgccaaa gaagtgattt atggggcaaa tgttgatgaa
     1801 aatggtatta gcgaagataa cgagtatgta aaaattttaa aagactatgc taataagaac
     1861 aatcacgaag ttatcaagct ttgtgctaag atagaagaag aattagttgg cttaagtaat
     1921 gaggaaagtg ctgaatttct aagctcttta ggtgtaaatg aaagtgggct tgatcaaatc
     1981 atacgcactg ctttttctaa acttggactc ataagctatt ttacagcagg agttttagaa
     2041 gtgcgttctt ggactattaa aaaaggctgg aaagctccaa aagctgctag cgtgattcat
     2101 aatgattttg aaaaaggttt tatcaaagca gaagtgattt cttatgaaga ttttatcacc
     2161 tacaaaggag aaaatggcgc taaagaggcg ggaaaattgc gtcttgaagg aaaagattat
     2221 atcgtcttag atggcgatgt gatgcacttt agatttaatg tttaggcaaa attagcctaa
     2281 acattcaaga aatttttcta aaatttgaat ttgtttttct acactagcaa ctgagcttga
     2341 accttcactt tgtttagaat ttaaagaatt ttcaaaatca agcaatttca tcgctttttc
     2401 atcaaagata ggatctattt ttgaaagatc ttcgatatca cttatatcaa tcccttgttt
     2461 ttcagcttgt gcgaccacat taccgactat aaaatgcgct tttctaaaag gaatattttt
     2521 ttctcgcact aaataatctg ccaaatctgt agccaacaaa tgcccttttt tgcaagattt
     2581 taacatattt tcttcattga tttttacttc ttttaacata gcatttaaaa taatcaaact
     2641 atcttttgct gttttaacac tatcaaaaag tccttcttta tcttcttgca tgtctttatt
     2701 gtaagctaaa ggaagtgcct tcataatcgt taaaagagaa atcaaatttc cataaacacg
     2761 ccctgttttt ccgcgtataa gttcgcaaac atcgggattt tttttctgtg gcatgataga
     2821 acttcctgtt gaaaaactat cgcttatggt taaaaatcca aattctgaag cagaaaataa
     2881 aatcatctct tcgcaaagtc ttgaagtgtg tgtaaaaatc actgctatat cataaagtaa
     2941 atcaagcgca aaatccctat cactcactcc atccatggca tttggcataa tgtctttaaa
     3001 gcctaaaatt tgagcgctaa gattgcgatt tgttgcatag ctagttcccg cacaagcaca
     3061 agaacctagc ggggaaaaat ctgcaagctc taaactattt tgcaaacgct tgatatcacg
     3121 cataaacata aaagcatagc ttaagatata aaaagaaaaa cttataggtt gtgcatgttg
     3181 caaatgcgta aagcttggca taatagttct tttatgcgct ctagcatgag aaagtagagt
     3241 ttggataagt tcttttaaaa gtattataag ttctaaatgg gactttttgg taaataattt
     3301 aaaatcagtt gcaacctgat cattgcgact gcgagctgtg tgaagtcttc cgcctatttc
     3361 acttcctata agctcactta aacgcttttc tatagccata tgaatgtctt catcttctat
     3421 attgaaaaca aagcgatttt gctctatctc gactctaacc tgctctaaac cttttacaat
     3481 agcctctagc tcatcttttt ttaagattct gcaattttca agcatagtag catgagcaat
     3541 agaaccctgt atgtcttcca catacaaagc tctatctata tttaaacttg cattaaattc
     3601 ttttaagagt tcgttacttg cttcgctaaa gcgtcctgac cacatctcat ttttcatcaa
     3661 tgcgccttaa attttaggtc caaactgact gtattctaca ccctctttga catcttcata
     3721 gcgtttgaaa ttatcgctga acatttttgc taatttattt ctagtggcga taaattcatc
     3781 cttatctttc caagtattga taggatttaa aagagagctt tccacaccag ctaaagtttt
     3841 aggaatagct aaattaaata catcaaaatt ttcaaattca cactgtgtaa tacttccatc
     3901 taaaatagca ttaatgcaag ctctagtagc ctttatactc attcttttgc ccacgccata
     3961 gcttccaccg ctccagcctg tattaacaag ataaacattt acttcatgtt tgtcaatttt
     4021 ttctccaagc aatcttgcat aaactgttgg atgcaaaggc ataaaaggct cgccaaagca
     4081 agctgaaaaa gtagcttgag gctctgtaat ccctctttct gttccagcta cttttgctgt
     4141 ataaccactt aaaaaataat acatagcctg ctctttgcta agtttgctta caggaggtaa
     4201 aattccaaaa gcatctgcac ttagaaaaat aatatttttt ggatgacctg cttttaagct
     4261 tggttcatga ttttctatat gttctatagg ataagaaact ctagtatttt cagtctttga
     4321 agcatcgcta taatctacgc tcttatcact tcttaaaacc acattttcca aaagtgcatt
     4381 tctcttaatc gctccataaa tttcaggttc actctcagga tcaagattga tagtttttgc
     4441 ataacatcca ccctcgaagt taaacactcc ttcatcatcc catccatgct cgtcatcgcc
     4501 tataagcttt ctttttggat cggtagaaag agttgttttt ccagtgccac tcaggccaaa
     4561 gaaaagtgca acatcgcctt tttcaccaac atttgcacta caatgcatag aaagcttatt
     4621 ttcaagaggt agccaataat tcatcatgga aaaaattcct tttttcatct cgccgccata
     4681 ccaagttccg ccaataactg caatattttc ttctatgtta aaaatcacaa aaacttcaga
     4741 atttaaacca ttcttttcat agtctttatt gacacatttg catgcattat aaacgataaa
     4801 atcggcttta aattcatcaa gctctttatc attaggacga atgaacatat tttttacaaa
     4861 atgtgcttgc catgcaattt cagttacaaa tcttatagcc ttacgacttt tcaaagaagc
     4921 gccgcaaaaa acatcttgca cataaatttc tttattgctt aattcttttc tagccttcat
     4981 taaaagctca tcaaaaagtt ctttagtgat tgcttgattg actttacccc aagctatata
     5041 cttgctagaa gggtcttgtt ttacaaaata tttatccttt ggacttcttc ctgtaaaaat
     5101 tcccgtatct acagtaaaag ttccattatc cgtgcattgc ccctcttcat tctttttctc
     5161 atgttcatag agttcatcaa aacttaaatt atgataaact ttttttatat tttccaaacc
     5221 taaattttca aatttcttca tttaaaacct caattatttt tatatattgc gactaaatta
     5281 ttttcgctaa cactatcacc cgtcttgaca caaatttttt ctattatgcc atcttttggt
     5341 gcactaacct ctatctccat tttcatagct tctaaaatca taacaacttg acccgatttt
     5401 acctcttcac cttcattaat ataaatttta aatacattac ccgaaattcc agcttgtata
     5461 ccttcgcttg aatccgcatc ttgcattata tcttcttgag tatctgcttt gtgaatactt
     5521 ttaatattta catctttatc aaagcctgca cttatttcta catgatattt gtttccatta
     5581 actgaaactg taaatttatt ctcatcaata ccagtagaat tttgttttgg cgcagacaca
     5641 ttcttgcgca cattaacttt agcttcacct tttaaatacg ctataccttt ttctttacaa
     5701 gctgctgcaa tgaaaatatt ttcctcgctt accgctatgc cctctttttc aagtaaactc
     5761 ttaacatagg ctatactttt ggtttcatcc ttatccgcta tatcgatagc aagttctgta
     5821 gtgggctcta aatttagctg tttagctgca agttttttaa cttcagcatc aggctcgaca
     5881 ggagttttac caaaatatcc caataccatt tttccataac cttcagcaat tttttcccaa
     5941 ggtccaaaca tgacattgtt aaaagcttgt tgaaaataaa attgagaaac aggagttaca
     6001 gaagttccaa aaccaccttt ttccacaact tcacgcatag catgaataac ttctgggaat
     6061 ttatcgagta tattattatc cctcatcatt tgagtattgg cagttaaagc tcctcctggc
     6121 ataggagaga atgggattaa aggacttacc attgtagctt caggcggtaa aaaatactct
     6181 tttaaagaat cttttaaaac tgcttcgtat tttaaaatct tttcttcttc taatccaccc
     6241 aaatcataat ttttaccttt taaagcatgc atcatagtta aaatatcagg ctgtgaagta
     6301 cccccactca caggagctgc tgctaaatct ataccatcaa ccccagcttc caatgctgct
     6361 aaataacaag ctatactcac tcctgcagtt tcatgcgtat gaagtcttat atgcacatct
     6421 tgtggtaaat tttttctagc cattttaatg gtttcataaa ttttatttgg atttgaagtt
     6481 ccgctagcat ccttaaaaca aatactatca aaaggaattt cagcagctaa aatttctttt
     6541 aatattcttt cataaaatgg tacatcgtgg gcaccttgac aatttggtgg taaatccatt
     6601 aaagtaattg tgatttcatg ttttaagccg tattttttaa tacattctcc actgaattta
     6661 agattattta catcgtttaa agcatcgaaa tttctaattg ttgtagtgcc atgcttagca
     6721 aaaagtttgg catgtaaatc aataagctct ttacttcctg tatccaaagt aacagtattt
     6781 acacctcttg ctaaagtttg caaattcgca tcttttccaa caatcgaacg gaatttatcc
     6841 atcatttcaa aagcatcttc attaaggtaa aaataaaggc tttgaaacct tgctccacct
     6901 ccaaattcaa aatgagttat ccctgcttct ttggctgctt ctactgctgg aaaaaaatct
     6961 tgcattaaga ctctagcccc ataaacagat tgaaaaccat ctctaaaact tgtatccata
     7021 acatctataa attttttagc catttatttt ccttatatga aataattaag aaattttaac
     7081 aaaaatttga taacacatta tgcaaataat tgctataggt gatataaaac gaataaaaaa
     7141 tagccaaatt gtaaatattt gacgatttac aaatttggaa aatattttat aaattcgctt
     7201 tttatccaca aaaaaaccta caaatataga acttacaatc gcccctaggg gaagtaatat
     7261 attagaagtc accttatcta aaagagtaaa aaaatctttt ccaaaaatac taaataaact
     7321 agaaaaatga gtatttaaag ataaaataca acaaattccc aatacaaaaa cgataaaacc
     7381 tataaatgat aaagctttaa tacgagaaat tttataatta ttaaccacat agaaagtcag
     7441 aggctctatc attgaaaccg cagaagtaat acctgcgaaa aaaagtgcca agaaaaaaca
     7501 aaaggctaaa acataaccta aaattccaag ctcattaaat aaactcatca aagatacaaa
     7561 tactattcct ggaccttgta tatttggatt tgcctcaaat tcaaatataa aagtaaaaac
     7621 tataagcccc atgataaatg agataagaag attaatcaaa actataaaaa tagaactttt
     7681 gataaaattt atttttttgc ttaaagccgc agaataagtc actatacagc ctattcctaa
     7741 acataatgta aaaaaagcaa gccctaaagc ttcagcaata gaacttaatt taaaatttga
     7801 aaaatcagga taaaaaagat aagaaaaagc ttgcttaaaa ccattttgaa aactcataca
     7861 ataaagcagc ataaaaataa gcatgataaa aagacttggc attataacca cattcagtct
     7921 ttcaatgcct tttattaaac ccttagacac aatcaataaa gtaagaaaaa aagataaaga
     7981 aaaaaataaa atagaattgc ttaaatcagc actgattaaa gtagaaaaat cacttcctgc
     8041 ttgctctaaa tttttaggta aataataaag actagtcaag gcatatttta aaacccaacc
     8101 cataattacc aaataaaaag aaagaacaaa aattccacct aaggtgaaaa ttccaccata
     8161 acgccatctt ctggcatgac tttttgcaag agtatagtaa gcatttgcta aatcacttct
     8221 acttaaacgc cccattgata cttcagctaa aaagatacta aaccctatac taagagtaaa
     8281 aaataaatac aaaagaacaa aaacaaaacc gccattttca gcgcttaggg ttggaaattt
     8341 ccaagcattt cccaaaccta cagccccgcc tgcaacagct aaaatgaaac ctatttttga
     8401 aaaatatgtt ctcattttta atccgatttt actttaaaaa agcactaatc ataacaacaa
     8461 taaccgccaa aggcgaaata aatcttaaaa agatatacca aagttcaaaa aatataccct
     8521 tcatataagg accaaataaa atttgcaaag cttctttttt gatcacaaaa cccacaaaaa
     8581 tagcagctaa aattccaccc aaaggcataa taattttact tgataaagtg tctaaaagat
     8641 caaaaacact aagaccaaaa attttaaatg cagttgaatc caaagaagac aaaatacaca
     8701 aaattcctaa agtataaact ataattccta tcaaaattaa agctttttta cggctcattc
     8761 caaagctatt aattaagtaa aaagcaaaag gctctatcat tgaaactgct gaagtaatac
     8821 ctgcaaaaat caaagatata aaaaaagctg ctcctaaaat atgtcctata gctccaagtt
     8881 tttgaaataa agtcgctaaa gaaacgaaaa tcagacctgg accctctttg cttgcatcaa
     8941 aaccaaactc aaagataaag gtaaaaacga ctaaacccat taaaagtccg attaaaagat
     9001 tgataaaaat gatatttaga gtgctggtaa taaaatttgt acgctcaggt aaacttgctg
     9061 aataagtgat aatagtccct acccccaaag ataaactaaa aaaagcaagt cctaaagcct
     9121 caagcacatt agaagtacta atcttagaaa aatcaggcac gaaaagaaat tcaaccgcca
     9181 tcataaaacc atctttagtc attgcataaa taagcatcaa aacaagtaag ataaataaag
     9241 ctggcatcat ccaaacattt agtttttcaa tgccattttt tacaccctta gatactgtgt
     9301 aaaaaacaat taaaaaaatc aaggtaaaac atacaaattg acttacaaaa tcacttgaaa
     9361 ttaattttcc aaattcagca gaacttgtat taagatcagg atataaattt ccgctaatac
     9421 ttaaatatgc atatttaagt atccagccaa ttactaaagt ataaaaagaa acgattaaaa
     9481 ttgctcctat catagtaaaa cctgcataag accaagcttt tttatttgaa ggagcaagtt
     9541 tttcataagc attaacagga tctttttcac taatctttcc tatactaagc tcggctagaa
     9601 aaataacaaa acctacaccc aaagttaaaa taatataaag caatataaaa gcagaaccgc
     9661 cgctttgtcc taccaaagta ggaaatttcc aagcatttcc taagcccaca gctgaaccgg
     9721 caactgctaa aataaaacct attttcgaaa atttagagtt caaaatttac aaccttgtat
     9781 taaaaaatta tttttaaagt attattaaag caaaaaaa
//
LOCUS       DAQUWA010000065         9806 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.065, whole genome shotgun sequence.
ACCESSION   DAQUWA010000065 DAQUWA010000000
VERSION     DAQUWA010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9806
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.065"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(130..687)
                     /locus_tag="R8X70_001480"
     CDS             complement(130..687)
                     /locus_tag="R8X70_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEF2929241.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHP
                     ESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDILKETMLHMVP
                     AKTRDANSKAFDLGVKYAQETKAHS"
     gene            complement(684..1529)
                     /locus_tag="R8X70_001481"
     CDS             complement(684..1529)
                     /locus_tag="R8X70_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEF2929242.1"
                     /translation="MAFNYDEYLRTDKLPTQWCWGCGDGVVLKCIIRAIEKLGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKNRVVDKSKFESMDFEERKDKFPTGVLYEDSTQPEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            complement(1531..2655)
                     /locus_tag="R8X70_001482"
     CDS             complement(1531..2655)
                     /locus_tag="R8X70_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HEF2929243.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGVSVTIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASVAIAPASLEEAYTETIRAFNLAEKY
                     MTPVFLLMDETVGHMNGKAVLPDLKDIEIINRKKFTGDKKDYKPYAAGENEPATLNPF
                     FTGYRYHVTGLHHGDIGFPTEDGAIVKKNMERLIGKIKNNQDDICTYEEYMLDDAEFL
                     IIAYGSVSRSAKEAINRLREEGIKVGLFRPITLYPVAEKKIAEVASKFKKVMVSELNM
                     GQYLEEIERVSSRRDFISLHRANGRPITPSEIIAKVKENI"
     gene            complement(2664..2975)
                     /locus_tag="R8X70_001483"
     CDS             complement(2664..2975)
                     /locus_tag="R8X70_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HEF2929244.1"
                     /translation="MSIAAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKFAKLTPEAKDRAVAVKNNKYKKL
                     A"
     gene            complement(2990..3859)
                     /gene="sucD"
                     /locus_tag="R8X70_001484"
     CDS             complement(2990..3859)
                     /gene="sucD"
                     /locus_tag="R8X70_001484"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEF2929245.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKG
                     GQTHLGKPVFDTVADAVKATGADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFEKDNETKAIVMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            complement(3869..5032)
                     /gene="sucC"
                     /locus_tag="R8X70_001485"
     CDS             complement(3869..5032)
                     /gene="sucC"
                     /locus_tag="R8X70_001485"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEF2929246.1"
                     /translation="MNIHEYQAKAIFADNGIPTLKGKVAFSVEEAVENAKELGGSVWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG
                     LEVAKVLGLDKDESKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSF
                     DDSALYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASAETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKAILDSSNLKNIKAATNLKNGAELVKSLVG"
     gene            complement(5029..5937)
                     /locus_tag="R8X70_001486"
     CDS             complement(5029..5937)
                     /locus_tag="R8X70_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEF2929247.1"
                     /translation="MKITIIGAGNVGSSVAYALILRELANEIVLVDINEDLLIARELE
                     LSQSIAALNLDIELTCTKDYAYTKNSDIVLFSAGFARKDGQSREELLQLNTNIMLDCA
                     KKIKEFNPDPLFIILTNPVDFLLNTLYESGIFSSKKIVAMAGVLDNARFKYEVAKKLK
                     ARISSVDTRLIGFHNDDMVLVKSYASVKNQKLGELLSEEEFEDLENEVKTGGAKVIKH
                     LKTSAYLAPASACVRMLESIRSGEFLPMSVILHGEFGVQNKALGTMARLGLEGVVEIM
                     KLELSDEEKDKVKKSLIKYQYIKEDK"
     gene            complement(5934..8138)
                     /locus_tag="R8X70_001487"
     CDS             complement(5934..8138)
                     /locus_tag="R8X70_001487"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEF2929248.1"
                     /translation="MQVTYTLTDESPALATYSFLPIVKAFLSKAHIGVKTSDISLSGR
                     ILATFSEYLKEDQRCEDALELLGELVKKSDANLIKTPNISASIPQLKAAIKELQEKGY
                     MLPNYPDEPKNDEEFQIKAKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPNSKTRVSYMKEGDFFSNEKAVLIDEDCVASIEFVADSGKSEILKEGLKLEKNEI
                     LDATFMDVEKLQDFYAKEIKASKDNDLLFSLHLKATMMKVSDPILFGYAVKIFFKELF
                     DEFKDEFETLGINPNNGLSELLSKVKTSSKKDEILRRYNEILNSRADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPAKLGSVSNVGLMAKKAQEYGSHDKTFVAKEDGVFKIIAKGKVLLEHKVRKGDIY
                     RANQAKFDAVLNWIDLGIERADLTGAEAIFWLDSKRASNKIMIDLVQNRLKEKNKNIA
                     ILAPYEACLKSLELIRAGKDAISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLNGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCGNHKAKVLAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQANDMELQSFFKDIALEL
                     SSNEEKIRAEFNDAQGVKVDLGGYYKFDDEKANKIMRPSATFNAIIEKIGQR"
     gene            complement(8255..>9806)
                     /locus_tag="R8X70_001488"
     CDS             complement(8255..>9806)
                     /locus_tag="R8X70_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HEF2929249.1"
                     /translation="LKNYDLNLPFYQKNGKLGSDLELIIDFNEKGDVKYNGTLSLENA
                     ELSLANFSVARAFVKLNQNALSIENASVKNEFLEADFNAKIDLATHKGIFDTQISRLY
                     FDNGELFDMRNQKTKINLDYTDDLQLSVPEWDLTLNFKEGLEAYANNPNILIPHSPLL
                     KKFGFMGAKSIYYKSVDFNDFNAQIQDAHFKNNLLVNNKPYENDSFGIVRKSGVLNIN
                     TQSGLANVKVIDNNKTIHLKNLTYIYQKDENASTSSFDIAKNTQNIILNGENLTLILA
                     DFNKTLNFDKMEANLKSDILDARATRKNANFDLHYSPNDLKLFIKNINDEHLNEFLQK
                     RAVQEGVFNFSVIGSGLDYFEGEFNFKDTFIRDLKGVNQLISFIDTVPSLLMFKTPTF
                     NEKGLSLHDGRVVFNRKKDLLSFEAINLNGNSMDLYGLGSANLRLNTIDIDLELKTLK
                     SASETISKVPILNYVILGKNQEISANIKVDGALDDPKFHTQILSDTLKTPFNLIKNII
                     QLPSNLFN"
BASE COUNT         3034 a         1998 c         1278 g         3496 t
ORIGIN      
        1 ttgaatttcc ttaataaata tgtttttgat tataaaattt taatcgttaa aagtagctaa
       61 attaaaaaat gaaaaagttt aaaaatttat ttcaagaagc aataaatttg ggaataaacc
      121 caaatttatt taagaatgag ctttggtttc ttgtgcatat ttaacaccca aatcaaaagc
      181 tttagaattt gcatctcttg ttttagctgg aaccatatga agcatcgttt ctttaagaat
      241 atccaaatca atacatttac tcatataagc agctatggct agtgcaacaa ctgattgagt
      301 agctacatta cctacctcat ctttagctat agtaatgata ggaatttcaa aaatttgcca
      361 ttttttataa tcttcgcttt caggatgaac caaatttggt tctacaacta tgatgccacc
      421 ctcttttact ccgccacgaa aacctttata acccttatct gcagttgaaa gcataaagtc
      481 tacttcgccc tctaccgcat aaggaaaaag aatttcttta tcatcgatga taatatcaac
      541 cttagtcgga cctccacgca cttgggaagt ataagttgaa gctttaaagg cttgacgacc
      601 ttctttaatc gctgcttcag ctaaaatttc tcctgcggtg ataacacctt gaccaccctc
      661 accaccaaat cttaattgat atttcatttt aaggctccta aatcaaccat tcttttttct
      721 ttggctgcac gacgcacttc ttcataagca tgacaatatt ctggctgcgt gctatcttca
      781 tataaaacac ctgttgggaa tttatctttt ctttcttcaa aatccatact ttcaaattta
      841 gacttatcca caacacgatt tttaatccaa tcaagcatag ccactgcttc acccatttta
      901 ttttttctac ctaggttaat atgacaattt gagaaaacat caacaaagct ataacctttg
      961 tgtgctaaag ctttataaat taaattttct aatttatttg cctcaataac atttcctctt
     1021 gccacaaaag aagctccagc agctttagtt aattcgcaag catcaaaatt tggatcgata
     1081 tttccaaatt gtgcagttac tgtataaaaa ccttttggag tagttggaga agtttgagaa
     1141 ttagtaagcc cataaataaa attgttgatt acaatatgag ttaaatctat atttctacga
     1201 catccatgta tagtatgatt tccaccaatt gctaaagtat caccatcgcc acttactaca
     1261 ataacatgtt tgctaggatt ggctagtttt atgcctgttg cataagcaat agctctacca
     1321 tgagtagtgt gcacggtatt gcaatttaca taagagctca ttctaccgct acatcctata
     1381 cctgaaacaa gacaaacatc atccatattc caacccagct tttctatcgc gcggataata
     1441 cattttaaaa ctacaccatc gccacaaccc caacaccatt gagtaggaag tttatcagtt
     1501 cttaaatatt catcataatt aaacgccatt ttatatattc tcctttactt tagcaatgat
     1561 ttcgctaggt gttataggac gaccatttgc acgatgtaag ctaataaaat cacgacgaga
     1621 acttactctt tcaatctcct caagatactg tcccatattt aattcgctta ccattacctt
     1681 tttaaatttg cttgccactt cagcaatttt cttttcagct acaggataaa gtgtgatagg
     1741 gcggaaaagt cctaccttaa taccctcttc tctgagccta ttgatagctt ctttagcaga
     1801 acgacttacg cttccgtaag ctatgattaa aaattcagca tcatcaagca tatattcttc
     1861 ataagtacaa atatcatctt ggttgttttt aattttacct ataagtcttt ccatgttttt
     1921 cttaactata gcgccatctt ctgttggaaa acctatatct ccatgatgaa gtccggttac
     1981 atgatagcga tagccagtaa aaaatggatt gagtgttgca ggttcatttt cgcccgctgc
     2041 ataaggttta taatcttttt tatcgcctgt gaatttttta cgattaataa tttctatatc
     2101 ttttaaatca ggcaataccg ctttaccatt catatgccct acagtttcat ccataagtaa
     2161 aaatacagga gtcatatact tttcagccaa attaaacgct cttatggttt ctgtataagc
     2221 ttcttctaaa ctcgctggtg cgatagccac actagcaaaa tccccatgag taggtgcttt
     2281 tgcttgaaat aaatcccctt gagccaccct tgttggaaga cctgttgaag gaccaccacg
     2341 cataacattt acaataacaa gtggaatttc agcgataaaa gcaagaccga tttgctctgc
     2401 tttaagtgaa attccaggac cactacttgc ggtcattgat tttacgccac tcatagcagc
     2461 accaatagtc acacttacac ccgaaatttc atcttccatt tgtataaaag ttccatcatt
     2521 tgcaggaagc atatggctta attcatgtgc aatttcagaa cttggtgtaa taggataacc
     2581 tccaaaaaat ttacatccac aatcaattgc tgcttttgca atcaaaacat tacctgttgc
     2641 tataacttct ctcattgtct ttcctatgct aattttttat atttattatt ttttactgct
     2701 acggctctgt ctttagcttc cggagtcagt ttggcaaatt taaattcatc tctttttgcc
     2761 accataatag caaaatctgg acaatgtgtt tcacactcag tacaacctat acaggactca
     2821 ggatgtacaa cctctatcat ttgtcccaaa accgcatgaa catcatcgcg catagctaaa
     2881 acccctgcag ggcaatagct aacgcagata ttgcaagctt tacatctatg ctcatctacc
     2941 caaacagggg tatcttttgg agctgctata ctcatatctt tttccttttt tagcctaata
     3001 ttttttgtat ttcttcaccg attaaagctg gagaatccac tacatgaatt ccataagact
     3061 ttaatgcttc ttttttagct gcagcacttt catcagcact acctactata gctcctgcat
     3121 gtcccattct tttacctttt ggcgcagtcg ctcccgcaat gaatgctacc acaggtttgc
     3181 taatattttc tttaataaat tttgctgctt ctacttctaa gctaccgccg atttccccta
     3241 tcataacaat agcttttgtt tcgttatctt tttcaaattc acttaaaagt tctttataag
     3301 caagtcctat gataggatct ccaccaatgc ctactgctgt tgaaattcca tacccacctt
     3361 gaactacttg attagctgct tcataagtta aagttccact ttttgaaata agccctacgc
     3421 aacccttttt aaagataaag cctggcataa tgcctaattt gcattcttca gaagtaatga
     3481 ttcctgggca atttggtcct ataattttca tgcctttttt atttgcatac tgcttggcaa
     3541 acatcatatc tttaaccgga gtatgttctg taattacaac agcaagctta atgcctgcat
     3601 ccgctgcttc aatcacacta tcacctactg caaaagcagg aacaaaaatc aaacttacat
     3661 cagctcctgt ggctttaact gcatctgcaa ctgtatcaaa aacaggcttg ccaagatgag
     3721 tttgaccacc tttatgagga gttacacctc cgactatatt tgtaccataa gccatacact
     3781 gctctgcatg aaaagttgct tctttacctg taaaaccttg aactattact tttgtatttt
     3841 tattaaccaa tatactcatt ttttatcctt atcctactaa actttttact aattctgcac
     3901 catttttaag attggttgct gctttgatat ttttaagatt tgaactatct aagatcgctt
     3961 ttgcttcagc tgcatttgta ccatcaagac gcactacgat aggaatgttc acctcaacat
     4021 ttttagttgc ctccaaaata ccatttgcga ttctatcaca acgaacaata ccaccaaaaa
     4081 tattgataaa tattacttta acatttttat ctcttaaaat gatttcaaaa gcttttgcaa
     4141 ctgtttcagc agatgcgcca ccgcccacat ctaagaagtt tgcaggtttt gcaccactat
     4201 aattgataat atccattgtt gccatagcaa gtcctgcacc atttaccata caagcaacat
     4261 caccgtctaa ttttacataa cttaaaccaa attcagctgc ttctctttca gcaggatttt
     4321 cttctgtgat atctctaagt tcggcaatct ctggatggcg ataaagcgca ctgtcatcaa
     4381 aactacattt tgcatcaaga gcgtaaaaat ctccttctgc agttttaatt aaaggattga
     4441 tttcaagcat attcatatct ttatccatat aaagcttata aagttttgct atcatagaaa
     4501 taagtttttt gctttcatct ttatctaatc ctaaaacctt tgccacttca agaccatgaa
     4561 acattttaaa gccaatttgt ggatcaatgc ctacttttgc gattttttca gggctttctt
     4621 tagccacttt ttctatatcc atcccccctt cgcttgaagc aatgattgta atttgttctg
     4681 ccattctgtt aaataaaata gccaaataat attcttttac tatatttgca ccactttcta
     4741 tataaagttt ttgcacgagc ttaccttcag gtcctgtttg atgagtaacc aaattcattc
     4801 ctaaaatttt acttgcataa tcttttacct catctaaatt tttagcgatt ttaacaccac
     4861 cgccaagacc acgaccacct gcatggattt gagctttcac agcccaaacg ctaccgccta
     4921 attctttagc attttctaca gcttcttcta cgctaaatgc aacctttccc tttaaagtag
     4981 ggataccatt gtctgcaaaa atcgcttttg cttgatattc atgtatattc atttatcttc
     5041 ctttatatat tgatatttta ttaatgattt ttttaccttg tctttttctt cgtcgctaag
     5101 ttcaagcttc ataatctcaa caacgccctc taaacccaat cttgccatag tacctaaagc
     5161 tttattttgc actccaaatt ctccatgcaa aatcacactc ataggtaaaa attctccact
     5221 tcttatggat tcgagcattc ttacacaagc gcttgcaggt gccaaatatg ctgaagtttt
     5281 aagatgttta atcacctttg ctccaccggt tttaacttca ttttccaaat cctcaaattc
     5341 ttcttcgctt aaaagttctc cgagtttttg atttttaaca cttgcataag attttactaa
     5401 aaccatatca tcattatgaa aaccaattaa tcttgtatcc acacttgaaa ttctagcttt
     5461 taacttttta gctacttcat acttaaatct tgcattgtct aaaacccctg ccatagcaac
     5521 aattttttta gaagaaaaaa ttccactctc ataaagagta ttgagcaaaa aatccaccgg
     5581 atttgttaaa atgataaaaa gtggatcagg attaaattct ttaatttttt tagcacaatc
     5641 aagcataatg tttgtattta gctgcaaaag ctcttctcta ctttggccat cttttcttgc
     5701 aaatcctgcg ctaaaaagca caatatcaga attttttgta taagcataat ccttagtaca
     5761 agttaattct atgtctaaat ttaaagcagc tatgctttgg gataattcta attcccttgc
     5821 aatcaataaa tcttcattga tatcaactaa aacaatctca tttgccaatt cacgcaaaat
     5881 taaagcatag gctacgcttg agcctacatt ccctgcaccg atgattgtga ttttcatctt
     5941 tgtcctattt tttctatgat agcattaaaa gttgcacttg ggcgcataat tttatttgct
     6001 ttctcatcat caaatttata atatccaccc aaatcgactt tcacaccttg tgcatcatta
     6061 aattcggctc taattttttc ttcattagag gaaagctcta aggcaatatc tttaaaaaag
     6121 ctttgaagct ccatatcatt tgcttgtctt gccaaatgat ttgcaaaata cattgctaaa
     6181 taaaaatggc ttgtacgatt atcatcttct tttacttttc ttgatggagc tttattgttt
     6241 tcaagccatt cacctatagc ctcatcaaga cattctgcta agactttagc tttatgattg
     6301 ccacacttat ttgcataaaa ttctaagctt gcttgtaggg ctaaaaattc acccaagcta
     6361 tcccaacgca aatgattttc ttcgactaat tgttctactt gctttggtgc tgaacctcct
     6421 gctccggttt caaacatagc tccaccattt aacattggta caactgaaag cattttagca
     6481 cttgttccaa gctctagaat aggaaaaaga tcggttaaat aatctcttaa gacatttcct
     6541 gtaatagaaa tagcatcttt tccagcacga atcaattcta agctttttaa gcaagcttca
     6601 taaggagcaa ggatagctat atttttattt ttttccttaa gacggttttg aactaaatct
     6661 atcataattt tattactagc tcttttactg tctagccaaa aaatcgcttc agctcctgtc
     6721 aaatcagctc tttctatacc caaatcgatc caatttaaaa cagcgtcaaa tttagcttga
     6781 ttggctctat aaatatcacc ttttctaact ttatgctcta ataaaacctt acctttggca
     6841 atgattttaa acactccatc ttctttagca acaaatgttt tatcatgtga gccatattct
     6901 tgagcttttt tagccatcaa acctacatta gatacactgc ctaatttcgc aggatttaaa
     6961 gtgccattct tatgcaaatc ttcgataacc gcttcataaa tagttgcgta agtttgatca
     7021 gggataactg catttgtgtc tttttctttg ccttctttat cccataatct tgcaccattt
     7081 ttaagcatag caggcataga agcatcaaca ataacatcgc ttggaacatg taaattggtg
     7141 atacccttat ctgaatttac catagaaata tcagcacgac tgtttaaaat ttcgttgtat
     7201 cttcttaaaa tttcgtcttt cttgcttgaa gttttcacct tgcttaaaag ttcgctcaat
     7261 ccattgtttg gattgattcc aagtgtttca aattcatctt taaattcatc aaataattct
     7321 ttaaaaaaga tttttaccgc ataaccaaaa agtataggat cgcttacttt catcatcgta
     7381 gcttttaaat gaagagagaa aagtaaatca ttatctttgc ttgctttgat ttctttagca
     7441 taaaaatctt gcaatttttc tacatccata aaggttgcat ctaaaatttc atttttttca
     7501 agctttaagc cttcttttaa aatttcactt ttgccactat ctgcaacaaa ttcaatactt
     7561 gctacacaat cctcatcgat taaaaccgct ttttcattag aaaagaaatc accttctttc
     7621 atataagata cacgagtttt agaattagga ttaaactcaa ccacacgata aggattattc
     7681 tttgcataat cttttaccgc tttagtagaa cggcgatctg aattgccttg tctaagcaca
     7741 ggattaactg ctgaacctaa aactttttga tattttgctt ttatttgaaa ttcttcatcg
     7801 ttttttggtt cgtctgggta gtttggtaac atataaccct tttcctgcaa ttctttaata
     7861 gcagctttca gctgtggaat agaagctgaa atatttggag ttttgattaa atttgcatct
     7921 gattttttta cgagctcacc caaaagctcc aaagcatctt cgcatctttg atcttctttt
     7981 agatactcac taaaagtagc taaaattctt ccagatagcg aaatatcaga agtttttact
     8041 cctatatgcg ccttgcttaa aaaagctttt actataggta aaaacgaata ggtcgcaagt
     8101 gctggagact catctgtcaa agtgtaagta acttgcattt tctgtccttt taaacactaa
     8161 ttttattttt caatctaaag tatattacaa ttaaaaaaaa atgcaagagt aaatttaaag
     8221 tttgttttag ttttaaaaca aactttaaac acttttaatt aaacaaatta gaaggaagtt
     8281 gtatgatatt tttaatcaaa ttaaaagggg tttttaaagt atcgcttaaa atttgagtgt
     8341 gaaattttgg atcatctaaa gcgccatcga cttttatatt ggcgcttatc tcttgatttt
     8401 tccccaaaat aacataattt aaaatcggaa cctttgaaat agtttcagaa gctgatttta
     8461 aagtttttaa ttctaaatct atatctatgg tatttaatct taaatttgca ctgcctaaac
     8521 catacaaatc catactgttg ccatttaaat taatcgcttc aaaacttaac aaatcctttt
     8581 tacgattaaa aacaactctt ccatcatgca aacttaaacc tttttcatta aaagtaggag
     8641 ttttaaacat caaaagactt ggaaccgtat cgataaaaga tataagctga ttaacccctt
     8701 taaggtccct tataaaggta tctttaaaat taaattcccc ctcaaaataa tctaggccac
     8761 tacctatcac gctaaaatta aagacaccct cttgcacagc ccgtttttgc aaaaattcat
     8821 tcagatgttc atcgtttata tttttaataa ataatttcaa atcattagga ctataatgaa
     8881 gatcaaaatt tgcattcttg cgagtagccc tagcatctaa gatatcactt tttaaatttg
     8941 cctccatttt atcgaaattt agagttttgt taaaatctgc taaaatcaaa gtgagatttt
     9001 ctccattaag tataatattt tgagtatttt ttgctatatc aaatgaagaa gtagaagcat
     9061 tttcatcttt ttggtaaata taagttaaat ttttaagatg tatggtttta ttattatcaa
     9121 taaccttaac attagctaaa ccactttgtg tatttatgtt taaaacacca cttttacgaa
     9181 caataccaaa gctatcattt tcgtaaggct tgttattaac caataagtta tttttaaaat
     9241 gagcatcctg tatttgcgca ttaaaatcat taaagtctac acttttataa taaatacttt
     9301 ttgcacccat aaaaccgaat ttttttaata aaggcgaatg agggattaaa atattaggat
     9361 tgtttgcata tgcttcaagt ccttctttaa aatttaaagt caaatcccat tctggcacac
     9421 taagctgtaa atcatctgta tagtctaaat ttatctttgt tttttgattt ctcatatcaa
     9481 aaagctcgcc attgtcaaaa tataatcttg aaatttgagt atcaaaaata cccttatggg
     9541 tagctagatc gattttagca ttaaaatctg cttccaaaaa ctcatttttt acgcttgcat
     9601 tttctatact caaagcattt tgatttaatt taacaaaagc tctagccacg ctaaaatttg
     9661 ctaatgaaag ctccgcattt tctaaagaca aagtgccatt atattttaca tcaccctttt
     9721 cgttaaaatc gattataagc tctaaatcac ttccaagttt tccatttttt tggtaaaaag
     9781 gtaaatttaa atcataattt tttaat
//
LOCUS       DAQUWA010000066         9606 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.066, whole genome shotgun sequence.
ACCESSION   DAQUWA010000066 DAQUWA010000000
VERSION     DAQUWA010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9606
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.066"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            39..1175
                     /gene="pseA"
                     /locus_tag="R8X70_001489"
     CDS             39..1175
                     /gene="pseA"
                     /locus_tag="R8X70_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid biosynthesis protein PseA"
                     /protein_id="HEF2929250.1"
                     /translation="MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEAKNQNINWQEREK
                     EFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKN
                     LDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL
                     IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTY
                     PSDEELQRVGVTGLFLGYYFKWDYKKILEISKKYGFLTLDRPVETTYENFENLDCYSN
                     HVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLVQKYDGKPPKKAIKKYLEFSG
                     FSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK"
     gene            1172..1777
                     /gene="hisH"
                     /locus_tag="R8X70_001490"
     CDS             1172..1777
                     /gene="hisH"
                     /locus_tag="R8X70_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEF2929251.1"
                     /translation="MIALIDYKAGNLNSVAKAFEKIGATNFIAKNLKDLQKADKLLLP
                     GVGSFKEAMKNLKELGFIEALKEQVLVQKKPILGICLGMQLFLERGYEGGVCEGLGFI
                     EGEVVKFEEDLNLKIPHMGWNELEILKQEPLYQGIEDKSDFYFVHSFYVKCKDEFVSA
                     KAQYGHKFVASLQKDHIFATQFHPEKSQNLGLKLLENFARL"
     gene            1778..2524
                     /gene="hisF"
                     /locus_tag="R8X70_001491"
     CDS             1778..2524
                     /gene="hisF"
                     /locus_tag="R8X70_001491"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEF2929252.1"
                     /translation="MLKTRIIPCVLLKNSQLVKSIEFKDFRTIGHLTSTMRIYNARNV
                     DELIILDIDASKSGDIDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISIN
                     SKALEDMDFISKAANRFGSQCIVCSIDVKRKGDQFCVYDRGNLLEKSPLELALEYEKK
                     GAGELLLTSVDFEGKAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVKALNLGADAL
                     AGAYIFHFSKYTPKDVKEELARQGFAVRLL"
     gene            complement(2489..2962)
                     /gene="pseH"
                     /locus_tag="R8X70_001492"
     CDS             complement(2489..2962)
                     /gene="pseH"
                     /locus_tag="R8X70_001492"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HEF2929253.1"
                     /translation="MIKLKNFTELNSQEIELIFKWRNHPDISQFMKTKYIDFEEHLRF
                     LKNLHQDSSKKYFLVFQDEQIIGVINFVNITTKSCEFGLYAKPDLKGVGQILMNEIIK
                     YAFENLKVNTLKAYVFKDNHKALKLYQQNHFTIYDEDKDFYHICLKQSDCKALPS"
     gene            complement(2959..3783)
                     /gene="pseG"
                     /locus_tag="R8X70_001493"
     CDS             complement(2959..3783)
                     /gene="pseG"
                     /locus_tag="R8X70_001493"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HEF2929254.1"
                     /translation="MKVLFRSDSSSQIGFGHIKRNLVLAKQYDDVSFACLPLEGSLID
                     EIPYPVYELSSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYSKASDYEGLVPFKCEVRCGFSYALIREEFYQEAKENREKKYDF
                     FICMGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHNNVRLFIDHEN
                     IAKLMNESNKLIISASSLVNEALLLKANFKAICVAKNQEKLANWLAKKGYEVEYRY"
     gene            complement(3767..4465)
                     /gene="pseF"
                     /locus_tag="R8X70_001494"
     CDS             complement(3767..4465)
                     /gene="pseF"
                     /locus_tag="R8X70_001494"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HEF2929255.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLIAYSIENALNSGIFD
                     EVVLSSDDEEIIKVALKYGVKVPFVRDKNLSDDYASSSAVVQNAIEILQSQNQIYDHV
                     CCLYATAPLLNKDILKQAYEKFIQNQSKFLFAAAEFEYPIQRAFYLNENNQVYMFDEK
                     HYKSRSQDLTKAFHDAGAFYFGTSKAWLEEDFMFKPHSSVFVLPRNLVCDIDTMQDLE
                     FAKILYKANHESAF"
     gene            4544..5773
                     /locus_tag="R8X70_001495"
     CDS             4544..5773
                     /locus_tag="R8X70_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEF2929256.1"
                     /translation="MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFII
                     GGYGANANIYFLDSYRNYIAKNFDVVAVHVFYHCFCQRRSDVEKYSTLADFTKDDLKL
                     IEKVLRKYNIPCDQLANNTVVSHCEYLSEIMTELKMLNRLPYDFEERLSATFIPSRGE
                     YQNFGIMAAIDHINALKDLVKRFPKLADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVI
                     DNSGSAVPPLNYIIGRELEFKSKDTNGDMYMQGDHFFVSCFLKTHWTRKENSPYFFNN
                     ENYFIRTLLNKDHLILQSQKNKNIIYVSYHSKEDPLTPANFKEQTMQILKILGYDVSL
                     NLIDENKIDGKFIKNLDHGCGIPDKALFRKELPLMLEKLQGRKSFMQENSISYPCGNK
                     VFTFKDVGDKFELEIKD"
     gene            complement(5787..6008)
                     /locus_tag="R8X70_001496"
     CDS             complement(5787..6008)
                     /locus_tag="R8X70_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEF2929257.1"
                     /translation="MTKTEFLEELKEAMHRDEDLNEDMLLDDIDEWDSLAFVSVMVLY
                     KNLFALKITAEDLKNCQKVSDLINLAKLD"
     gene            complement(6008..7069)
                     /locus_tag="R8X70_001497"
     CDS             complement(6008..7069)
                     /locus_tag="R8X70_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEF2929258.1"
                     /translation="MKTRFDKAKISGICVSVPEHKICIDDELESIFSNDIKTLKRMKK
                     VIGLNTRYICDKNTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACY
                     LHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLICGDTLSKFIHPKNM
                     NLAPIFGDGVSATLIEKTDFNEAFFELGSDGRHFDKLIIPKGAMRIPKADIFNNDSLM
                     QTEEFRQLESLYMDGANIFNMALECEPKSFKEILEFSKVEEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGAGLSWGSA
                     VLNFKDLYTKDILIYTKEK"
     gene            complement(7059..8621)
                     /locus_tag="R8X70_001498"
     CDS             complement(7059..8621)
                     /locus_tag="R8X70_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEF2929259.1"
                     /translation="MNLFSPHLKRNELIKFAKELDFSKSQDLLINVHRNHAFEGVQSI
                     IAPFLHFANLRAEFNFSSYDDSLSFDNFKEASLELLWLDLTRYKNNVQNFIEERLLEL
                     RKISQNPILVLSLGEFKTDKKILNCEIFNIEKLIKEYFDEEDILDLAKEELTGSKLNN
                     KALIFLAQILGLSLIPALVKPALKALVLDLDNTLYQGILGEEGIDNLNLSPLHKTLQE
                     KIKTFKKQGFLLALASKNEEKDAKKLFEIRKDFILQWDDFDARMINWEPKGENILKIA
                     KKFNINTNAMLFIDDNIAELENTKFTGVKTLLCDENILYKIKLFPNLLKLSNTKEDQI
                     RAKDIAANALREELKSLSDEEYFQNLEISLNFSKNDLQNIPRISELLGKTNQFIANYT
                     RLNQEKVAQHMQKELIVSVSMSDKLSDSGIIAIFVFSCKEGNLFIDDLCISCRALGRK
                     LETRMFFKAFELALHFFDLKNNNARLYYQKGERNMPFLSFLEQISKEIEKNSALVSFQ
                     NLNFKGLIIHEN"
     gene            complement(8618..>9606)
                     /locus_tag="R8X70_001499"
     CDS             complement(8618..>9606)
                     /locus_tag="R8X70_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929260.1"
                     /translation="NKYDAISNPLSKEKNAKEELKYNTILFKQLFPLCANYLNPQNIA
                     ILLASTRIVGMKIPGLHSIYSSLNLNFSNDNIENKQLIYNYEKHHSIECYLIDFISPC
                     KGSIKAFIRPQLVKNLNYKSLVLKYPNISENKNFKEQKALVIGASSGLGNTCAKILAL
                     GGAKILATYHTKNIQEDIPNCDFLQYNVLKPSKISIEKIKKFNPTHIYYFATPKISTQ
                     NNKLDRKMLFDFLDYYIFGLEKILSFTSPISSSSSSSSSIEDLPLDMKEYSIAKAAME
                     IYMKYLKKTKNIEIKIPRFPRAKTNQTLSFIPQDLKETDELIVSMLLNKELK"
BASE COUNT         3257 a         1323 c         1562 g         3464 t
ORIGIN      
        1 tataacgata tatatttaag actaattaaa ggaaatttat gaaattttgt aaaaaatgtg
       61 tgatgccaga tactaagcct gatttacatt ttgatgaaga aggtgtttgt gatgcttgtc
      121 gttctcaaga agctaaaaat caaaatatta attggcaaga aagagaaaaa gaattttttg
      181 agcttataaa aaaatacaaa aaacatcctg tttatgattg tgttatcgga gtaagtggcg
      241 gaaaagattc tacttttcaa gtggttaaaa tgcttgaact tggacttaat cctttgtgtg
      301 tatgttttga gcctagcgta cctacgaaaa tagggcgcaa aaatttagac aatttaaatc
      361 atcttggcgt ggatttgatc catatcaagc gtgatccaaa agtttatcaa aaacttgccc
      421 gtgaagcttt tataagaaca ggggataatg agtggcaaaa ccatttggga atttttactt
      481 ctgttccacg catagcggta aattttggag tgcctttgat catctgggga gaaagtccgc
      541 agatagagta tggcggtcct gcgagtagta aaaataagaa tattttaggc agagagtggc
      601 ttgaagaatt tggcgggctt ttaggaaatc gtgcttctga tatgcttggg gtaaatggta
      661 ttactgaaaa agatttgttt ttatatactt atccaagtga tgaagaactt caaagagtag
      721 gggttacagg acttttttta ggatattatt ttaaatggga ttataaaaaa attcttgaaa
      781 tttctaaaaa atatggtttt ttaactctag atcgtcctgt tgagactact tatgaaaatt
      841 ttgaaaattt agattgttat tctaatcatg tgcatgatta tttaaaatac tgcaaatacg
      901 gctttggtag agcaacggat aatgcttgtt tggatattcg tttaggttat atcagccgtg
      961 aagaaggggt gcgtttggta caaaaatacg atggcaagcc ccctaaaaag gctattaaaa
     1021 aataccttga attcagtggt tttagtgagg aagaatttca aaaaatagta gattctttta
     1081 ccaataaaaa aatttttaaa cgtgatgaaa atggtaaatt tataagagat tatgatggtt
     1141 ctttggtaag aaaagacgag tgtgttttaa aatgatagcg ctcattgatt acaaggcggg
     1201 aaatttaaac tccgttgcta aggcttttga aaaaatagga gctacaaatt tcatagctaa
     1261 aaatctaaaa gatttgcaaa aagcagataa attgctttta cctggagtgg gatcttttaa
     1321 agaagccatg aaaaatttaa aagaacttgg ttttatagaa gctttaaaag agcaagtttt
     1381 agtacaaaaa aaacctattt taggcatttg tttgggaatg cagctttttt tagaaagggg
     1441 ctatgaaggt ggagtttgcg aaggacttgg ttttatagaa ggtgaagtag tcaaatttga
     1501 agaggattta aatttaaaaa tcccacacat gggttggaat gaacttgaaa ttttaaaaca
     1561 agaacctttg tatcaaggca tagaagataa gagtgatttt tattttgtgc attcttttta
     1621 tgtgaaatgt aaagatgagt ttgtaagtgc taaagcacaa tacgggcata aatttgttgc
     1681 atctttacaa aaagatcata tttttgcgac gcagtttcat cctgaaaaaa gtcaaaattt
     1741 aggcttaaaa cttttagaaa attttgcaag gctttaaatg ttaaaaacta gaattatccc
     1801 ttgcgtgtta ttaaaaaatt ctcaacttgt taaaagtata gagtttaaag attttcgcac
     1861 tatagggcat ttaacttcaa cgatgagaat ttataatgca cgcaatgttg atgaacttat
     1921 tatcttagat atagatgctt caaaaagtgg tgatatagat tttgaaagta tagaagatct
     1981 tgctaaagaa tgttttatgc ctttaactat aggtggcggg ataaaaaccc ttgaagatat
     2041 acaaaagatt ttaaatttag gtgcggataa aatttctatc aattctaagg ccttagaaga
     2101 tatggatttt ataagtaaag cggctaatcg ttttggttct caatgtatag tttgttctat
     2161 agatgttaaa agaaaaggag atcaattttg tgtttatgat aggggaaatt tacttgaaaa
     2221 aagtccttta gaacttgctt tagaatatga aaaaaaagga gctggagagc ttcttttaac
     2281 ctctgtggat tttgaaggaa aagcaaaggg ttatgattta gaacttttaa agatctttca
     2341 aaataaactt aaaattcctc ttattatcaa tggaggactt agcaatccaa gtgatggagt
     2401 taaggcttta aatttaggtg ccgatgcttt agcgggtgct tatatttttc atttttctaa
     2461 gtatacccct aaagatgtaa aagaagaatt agctaggcaa ggctttgcag tcagattgct
     2521 ttaggcaaat atggtaaaaa tctttatctt catcataaat agtaaaatga ttttgttgat
     2581 ataattttaa agctttgtga ttatctttaa aaacataagc tttaagagta tttactttta
     2641 agttttcaaa agcgtatttt ataatttcat tcattaaaat ttgtcctacg ccttttaaat
     2701 caggttttgc ataaagtcca aattcacaag atttagttgt gatattgaca aaattaatca
     2761 caccgataat ctgttcatct tgaaaaacta aaaaatattt tttgctagaa tcttgatgta
     2821 aattttttaa aaatcttaaa tgttcttcaa aatcaatata ttttgttttc ataaattgac
     2881 tgatatcggg gtgattacgc catttaaaaa tcagctctat ttcttgagaa ttaagttctg
     2941 tgaaattttt aagttttatc aatacctata ctccacttca tagccttttt tagcaagcca
     3001 attggctagt ttttcttgat ttttagcaac acagatggct ttaaaatttg cttttaaaag
     3061 taaagcttca ttgactaaag aacttgcact gatgatgagt ttattgctct cattcatcaa
     3121 ttttgcaata ttttcatgat cgataaataa tctaacattg ttatgtaatt ttgcaaattt
     3181 ttgcaatttt ttaagattag gattagaaga gctggttgca atgcttatga tttttgtttt
     3241 aggtaattcg ctagcgattt gtaaagaaag gttttttata tcagttccac ccatgcaaat
     3301 gaaaaaatca tatttttttt ctctattttc tttggcctct tgataaaatt cttccctgat
     3361 taaagcataa gaaaaaccac atcttacttc gcatttaaaa ggcactaaac cttcataatc
     3421 acttgctttt gagtaagcat tgacattgag taaaatatca caatgatgag gctttatttc
     3481 atcatcaaag cttagaattt tcacccctgt ttcaagtttg atcagctttt catcatctac
     3541 actgatgcca tagtgatcga tgattagaag ttcaaatttt tcttctttga tgagattgat
     3601 aagctcgtag atactttcgc tactaagctc ataaacagga taaggaattt catcgatcaa
     3661 agagccttct aaaggcaaac aagcaaaact tacatcatca tattgtttag ctaagactag
     3721 attgcgttta atgtgtccaa agcctatttg actggagcta tcgcttctaa aaagcacttt
     3781 catgatttgc cttataaagt atttttgcaa attctaaatc ttgcatggta tctatatcac
     3841 aaactaaatt tcttggcaat acaaatacac tagaatgagg tttaaacata aaatcttctt
     3901 caagccaagc tttacttgta ccaaaataaa aagctcctgc atcatgaaaa gcttttgtta
     3961 agtcttgtga gcggctttta taatgttttt catcaaacat ataaacttga ttgttctcat
     4021 ttagataaaa agccctttgt ataggatact caaactcagc ggcagcaaat aaaaatttgc
     4081 tttgattttg gataaatttt tcataggctt gtttcaaaat gtctttgttt aacaaaggag
     4141 cagtagcata aaggcagcag acatgatcat aaatttgatt ttggctttgt aaaatttcta
     4201 tggcattttg cactacagca ctgcttgaag cataatcatc gcttaaattt ttatcacgca
     4261 caaatggaac ttttacaccg tattttaagg ctacttttat gatttcttca tcatcgcttg
     4321 aaagcaccac ttcatcaaaa atacctgaat ttaaagcatt ttctatgcta taagcgatta
     4381 aaggtttacc tagaaaatca atgatatttt ttctaggaat tctttttgat ccaccacgag
     4441 cagggatgat gcaaagattt ttcatagtta agccttgttt ttgtgtttta ttttactaaa
     4501 atttaagtat aattgtcttt aaaatacaat aaaaggctta aaattgctta taaaccaaac
     4561 ctttgaaatc gattcttgtg atgatgtaga attaaatata aaaagaacta gcaaacttga
     4621 ataccgtata agttatgatg atgaaaaaga gattaaagct atagttttta taataggagg
     4681 ttatggagcc aatgcaaata tatatttttt agactcttat agaaattata ttgctaaaaa
     4741 ttttgatgtt gtagcagtgc atgtttttta tcattgtttt tgtcaaaggc gttcggatgt
     4801 tgaaaagtat tcaacattag cagattttac aaaagatgat ttaaaattaa tagaaaaagt
     4861 gcttcgtaaa tacaatattc catgtgatca attagccaat aatactgtag ttagtcattg
     4921 tgaatatttg agcgagatta tgacagaatt aaaaatgtta aatcgattgc cttatgattt
     4981 tgaagaaaga ctaagtgcaa cttttattcc ttcgcgtgga gaatatcaaa attttggcat
     5041 tatggcagct attgatcata tcaatgcttt aaaagatcta gttaaacgct ttccaaaact
     5101 tgcagattta ccaaaaattt atggaggggg gtcttatgga ggatacctat ctttactcat
     5161 agcaaaaata gctccttggt atgtggatgg tgtgattgat aattcaggtt cggctgttcc
     5221 accgcttaat tatattattg gtagagagtt ggaatttaaa agcaaagata ctaatgggga
     5281 tatgtatatg cagggcgatc atttttttgt gagttgtttt ctaaaaaccc actggacgcg
     5341 taaagaaaat tcaccttatt tttttaataa tgaaaattat tttattagaa cattgttaaa
     5401 taaggatcat ttgattttgc aaagtcaaaa aaataaaaat attatttatg tgagttatca
     5461 tagtaaagaa gatcctttaa ctccagcaaa ttttaaagaa caaaccatgc aaatattaaa
     5521 aattttaggt tacgatgtaa gcttaaattt gatagatgaa aataaaattg atggaaaatt
     5581 tattaaaaat ttagatcatg gttgtggtat acctgataaa gccttattta gaaaagaact
     5641 tcctttaatg cttgaaaaac tacaaggaag aaaatctttc atgcaagaaa attccatctc
     5701 ttatccttgt ggaaataaag tgtttacttt taaagatgtg ggagataaat ttgaattaga
     5761 gataaaagat taaaacctta aaggttttaa tcaagctttg ctaaattgat taaatcactt
     5821 actttttgac aatttttcaa gtcctcggct gtgattttta aagcaaaaag atttttataa
     5881 agcaccatca cagatacaaa agccaaacta tcccactcat ctatatcatc aagtagcata
     5941 tcctcgttta agtcttcatc tctatgcata gcttctttaa gctcttctaa aaattcagtt
     6001 tttgtcatta tttctccttt gtgtaaatta aaatgtcttt tgtgtataaa tccttgaaat
     6061 ttagcacggc acttccccag ctaagccctg caccaaaagc actcaaactc gctttaaatt
     6121 cttttggagt atctagttca caaagtaggg caggtagtga acaagcgctt aaattagcgt
     6181 atttttccat gataaaatta ggaactttat catcattaag ttttaactct tctttaatac
     6241 aatcaaccaa atacgcatta gattgatgaa aaagatgaaa agcaatgtct ttttcttcta
     6301 ccttggaaaa ttctaaaatt tctttaaagc ttttaggttc gcattctaaa gccatattaa
     6361 aaatatttgc tccgtccatg taaagacttt ctaattgtct aaactcctca gtttgcatga
     6421 gcgaatcatt gttaaaaata tctgctttag gtattctcat cgcacctttt ggaatgatga
     6481 gtttatcaaa atgtcttcca tcgcttccaa gctcaaaaaa agcttcatta aaatccgttt
     6541 tttcaattaa agttgcactt actccatcgc caaaaatagg ggctaaattc atatttttag
     6601 gatggatgaa tttgcttaaa gtatccccac aaatgagtaa aattttacct aagccacttt
     6661 gtattaaaga atgagcgaca aataagccgt ataaataccc tgcacaagct tgccctaaat
     6721 caaaagctat ggttttagag cttaaattta aaagctgatg taaataacaa gctgtagaag
     6781 gcatgaaaaa atcaggactt tgagttacta cgatgagtgc atcaaggcta tttttatcta
     6841 tatttaaacc ttgtaaaagt gtattggctg cgtgtttgcc aagatcgctt acacaagtgt
     6901 ttttatcaca aatataacgc gtgtttaaac ctatgacttt tttcattctt ttaagggttt
     6961 taatatcatt tgaaaaaatg ctttctaact catcatcaat gcaaatttta tgttcaggta
     7021 cgcttacgca aatgcctgaa attttagctt tatcaaatct agttttcatg gattataagt
     7081 cctttaaaat ttaaattttg aaatgaaaca agggctgagt ttttttcaat ttctttagaa
     7141 atttgttcta aaaagctcaa aaatggcata tttctttcgc ctttttgata gtaaagcctt
     7201 gcattattgt ttttaagatc aaagaaatgt aaagctagtt caaaggcttt aaaaaacatt
     7261 ctagtttcaa gttttctacc taaagcccta caagaaatgc aaagatcatc gataaataaa
     7321 tttccttctt tgcaagaaaa aacaaaaata gcgataatcc cactatcgct taatttatca
     7381 ctcatgctca cacttacaat gagttctttt tgcatgtgtt gtgcgacttt ttcttgattt
     7441 aagcgtgtgt aattagcgat aaattgattg gttttgccta aaagttcgct aatgcgaggg
     7501 atattttgca gatcattttt gctaaaattt aagctgattt caagattttg aaaatattct
     7561 tcatcgctta agcttttaag ctcttctctt aaagcattgg ctgctatatc tttggcacga
     7621 atttgatctt ctttggtatt tgaaagtttt aaaagattag gaaaaagttt gattttataa
     7681 agtatatttt catcgcataa aagtgtttta acgcctgtaa atttcgtatt ttcaagctcg
     7741 gcgatattat catctataaa aagcatagcg ttagtattta tattaaattt tttagcaatt
     7801 tttaagatat tttcaccttt tggctcccaa ttgatcattc tagcatcaaa atcatcccat
     7861 tgtaagatga aatctttcct tatttcaaaa agtttttttg cgtctttttc ttcatttttt
     7921 gaagctaggg caagtaaaaa cccttgtttt ttaaaagttt taattttttc ttgtaaggtt
     7981 ttgtgcaaag gacttaaatt aagattatct ataccctctt cacctaaaat tccttgatac
     8041 aaggtattat caagatcaag tacaagagct ttaagagcgg gttttacaag tgcagggatg
     8101 agactaagtc ctaaaatttg tgctaaaaaa atcaaggctt tattattaag cttagagcct
     8161 gtaagttctt ctttagctag gtctaaaata tcttcttcat caaaatactc ttttatgagt
     8221 ttttctatgt taaaaatttc acaatttaaa atttttttat ctgttttaaa ttctcctaaa
     8281 ctaagaacta aaatagggtt ttgtgaaatt tttcttagtt ctaaaagtct ttcttctata
     8341 aaattttgca cattattttt atagcgggtt aaatctagcc ataaaagttc taaactagct
     8401 tctttaaagt tatcaaaact caagctatca tcataagagc tgaaattaaa ctcagctctt
     8461 aaattagcaa aatgtaaaaa aggagcaatg atactttgca ctccttcaaa agcatgattt
     8521 ctatggacat taataagaag atcttgactt ttgctaaagt ctaattcttt ggcgaatttt
     8581 ataagctcat tgcgttttaa atggggtgaa aaaagattca ttttagctcc ttgtttaata
     8641 acatagagac gataagttcg tctgtttctt ttaaatcttg tggaataaaa cttagggttt
     8701 gattagtttt tgctcttgga aatcttggta ttttaatttc tatatttttt gtttttttaa
     8761 gatatttcat atagatttcc atggctgctt tagctatact atattctttc atatctaagg
     8821 gtaaatcttc tatagaagaa gaagaagaag aagaagaaga aattggactt gtaaagctta
     8881 aaattttttc taaaccaaaa atataataat ctaaaaaatc aaataacatt ttgcggtcaa
     8941 gtttgttgtt ttgtgttgaa atttttggcg ttgcaaaata ataaatatga gttggattaa
     9001 attttttaat tttttctatg gaaattttac taggttttaa gacattgtat tgtaaaaaat
     9061 cgcaatttgg aatatcttct tgtatatttt tagtgtgata agtggctaaa atttttgctc
     9121 cccctaatgc taaaatttta gcacaagtat ttccaagacc actactagct cctatgacca
     9181 atgccttttg ttctttaaaa tttttatttt ctgatatatt tggatatttt aaaacaagac
     9241 ttttatagtt taaatttttt acaagttgcg gacgaataaa agctttaata gagcctttac
     9301 aagggcttat aaagtctatt aaatagcact ctatggagtg atgtttttcg tagttataga
     9361 tcaattgctt gttttcaata ttatcatttg aaaaatttaa atttaaacta gaataaatac
     9421 tatgaagacc cggaattttc atgcctacta tacgcgtact agcgagtagt atagctatat
     9481 tttgtggatt taaataattt gcacataatg gaaaaagctg tttaaacaga atggtgttat
     9541 attttaactc ttcttttgca tttttttctt ttgataaagg atttgaaata gcatcgtatt
     9601 tattaa
//
LOCUS       DAQUWA010000067         9583 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.067, whole genome shotgun sequence.
ACCESSION   DAQUWA010000067 DAQUWA010000000
VERSION     DAQUWA010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9583
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.067"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            26..1891
                     /gene="rpoD"
                     /locus_tag="R8X70_001500"
     CDS             26..1891
                     /gene="rpoD"
                     /locus_tag="R8X70_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEF2929261.1"
                     /translation="MNAKTQDMELEELFKENEKDYITYEKLVKYFSKQPNSATAKKVQ
                     TLMKKYKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRS
                     DSPVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYREPLI
                     NRERRVKELFKSFDDEEKNDDKLDELEDEDEENDEELENEEETPKKTSKKEDERTLKV
                     IEKFKALEKAKKDWLKVSKDKESGDEILDKLGIAFKKNILKEKLMDLGPTSKLISEIV
                     KSMETALKSDEEFDKELKRLEYRLPMFSEELKNRHANILKDITKLSKEEITERALETT
                     MVSTYMEIKKLFQTKEASEKSFDLEKERLKEILEQIKRGKKISDEAKTRMAKSNLRLV
                     VSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIAD
                     QARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITKE
                     PISLEAPIGSEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIRM
                     RFGLMDDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
     gene            complement(1892..2401)
                     /locus_tag="R8X70_001501"
     CDS             complement(1892..2401)
                     /locus_tag="R8X70_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEF2929262.1"
                     /translation="MKKIYILRHAKAVKDEEVQDFDRKLNKRGKEDLEKLFYNLKTHE
                     IKFDFILSSPSKRTAKTAKKIAEFYNFDKEKIQFIDELYLANLSKIYQILQTIDKKYN
                     EVLLVGHNPTLMELGEFLGSLCLTSFPTSSMLCLEFDIEDFKDLKAHSGKVIFFEHVR
                     KLKEEKELD"
     gene            complement(2398..2916)
                     /locus_tag="R8X70_001502"
     CDS             complement(2398..2916)
                     /locus_tag="R8X70_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEF2929263.1"
                     /translation="MVVILLILLNILFYFTIPYGYYNLLGLNILFFKGAYWQILSSMF
                     MHGNLTHLILNMIVLFQFGRILESYLGALRFFLLYIIGGLMCSLLSAFYVYFSFYYFG
                     GMINLVGASGAICVLMGYYAFLDKSSTKGLIVAILLMSFAPLLMGVNVAWYGHIFGFI
                     CGYFLGKLRRKI"
     gene            3016..3432
                     /locus_tag="R8X70_001503"
     CDS             3016..3432
                     /locus_tag="R8X70_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HEF2929264.1"
                     /translation="MKIKFYGIIAILSTFLNADIIISPDELPSISKEFLKNNFQAPIG
                     IVQRDKHAYEVYLSDGTELEFESDGSWKEIESKVFPFDLNFLPPNLTNIIQNKFPNTK
                     AREIERKINYYKIKLTNNIEVHIDFNGTILYTEYDD"
     gene            complement(3487..5091)
                     /locus_tag="R8X70_001504"
     CDS             complement(3487..5091)
                     /locus_tag="R8X70_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEF2929265.1"
                     /translation="MKNKKIILISFLILCLLFGILYFKNEPKYIDENLYQSLLSQNLI
                     EKAVIDKDEIWLKAKGESYVIVKDGVDIKTLLSKVPVEIKKDSTLWVFFVIFVFLIAL
                     LLSFVYFARKKELAKYPISSKTQTQTSTTNLESSNIKPVISNITFNDVAGVSEVKMEL
                     SELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFV
                     EIYVGMGAKRVRELFSRAKMMAPSIIFIDEIDAVGKARGEMSNVERDSTLNQLLTQMD
                     GFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKGKNNN
                     IDLNKIAKASVGFSGAGLETLVNEAAINALRRNSSLVEESDFYAVLNKVLLGKKKILS
                     FNDEEKGIQATYQAAKALSAYYFDIGFEKITLIEERFKEYEHAIRSKSELINRIKVYL
                     AGSRAMSLIYNESYTNSQNDFLKVKELLDYMISFGMLEEPNLNEIKRELDEFLFPLKE
                     KISTLAKILLEKEKIEYNDVKEVVQV"
     gene            complement(5088..6344)
                     /gene="mtaB"
                     /locus_tag="R8X70_001505"
     CDS             complement(5088..6344)
                     /gene="mtaB"
                     /locus_tag="R8X70_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEF2929266.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIVNDEEKAQIIVVN
                     SCTVTNGADSGIKSYINSMQKKGVRVILTGCGAVSKGKELLDKKQVFGVLGASNKDKI
                     NEFLGLKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEQALLRQVEILGANGYSEVVLTGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRL
                     GSLEPAQIDESFLEILDERWMERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIAS
                     KGYALGTDFIVGHPGETEELWHEALKHFQEFPLTHIHAFIFSPRNNTHSATMKDTING
                     AVAKERLNTLKVIIENNNYEFRKRVKTPLEILVENQKDGFFEGYDQFFNKIKIKSSKY
                     IAKEWLKLERYEVQEKHNFADLEGKK"
     gene            complement(6341..7912)
                     /locus_tag="R8X70_001506"
     CDS             complement(6341..7912)
                     /locus_tag="R8X70_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HEF2929267.1"
                     /translation="MRKILLLLCFSLFAFGDINRTIINNINEKISNLDTVIGASIWDV
                     RYENFIKYQDINDELIILNLELKKIEDVHLQDELKRKIATLEEQLNVLKEYKELNFAH
                     SLSAPEDIETLSKLTNPFAIIGAFSHIKKLRGEKEEYAFKFNDFKNLVEKIREKNLEL
                     KELVNLESNIENIEALKASDKKLEEFDQALKFASVSYSVYEKKIDDEIARVSAEIKAQ
                     GLRAINIVIAIVIVVAIAFMLKLVAKKYIKDNERYYTATKIINFINLNIIFLILLFAY
                     IENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIVFGGSFRVGDRVKVFQNDTTYVG
                     DIIDISFLRITLYEDITLETYSKNRRAGRIVFIPNNYVFTNLISNYTHHGMKTILDGI
                     DISVTFDSNIEKAQAIVEEVVNRLAKGYTELAKKTMKRLQNEYSIRNPKVEPRFFVFF
                     EHWGMRISAWYMTNSYAALILRSAISKEIIKEFNKHEDIKIAYPSQNLYLGNLNQAPF
                     ETHYNSMHFHTKDNN"
     gene            complement(7909..8964)
                     /locus_tag="R8X70_001507"
     CDS             complement(7909..8964)
                     /locus_tag="R8X70_001507"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEF2929268.1"
                     /translation="MQINVDLKENAYKVYIDELDNLELDTKVFILSNPKISGLHLKTL
                     LSKIKAKELFIATIEDGEEYKNLLTLEKILNQMFNSKLNRKSILISFGGGVISDMGGF
                     AASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNAFGKNLIGTFYQPKAVYCESEFLR
                     TLGRRELAAGMAEFIKMAAMFDRDLLEFIEAIDKESFLNATCENEIFTQIISKSVELK
                     ARVVECDEKESGLRMLLNYGHTFAHVIENFTDYKQYLHGEAVAIGMNMANRLALKLGL
                     LSKEECERIEKILLQFNLPTHYKIENINEFYEAFFMDKKSANQKLNFILANSLGKGLI
                     KGDIAKEMILETLEEFQ"
     gene            complement(9132..>9583)
                     /locus_tag="R8X70_001508"
     CDS             complement(9132..>9583)
                     /locus_tag="R8X70_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="potassium transporter TrkA"
                     /protein_id="HEF2929269.1"
                     /translation="HFEQEKKTFFELKIPILKIGEGKFENIQNAVILSTNETELENNA
                     NVITDLSKQLDFDITLYYYNPNLQNTTDMEEYFGSLSKLYDKNIQIISKNDENPILSL
                     SYRADLLQFVSFEKELLEGEFSKSLSTNLNRHYSKMRQNYQLFIPVE"
BASE COUNT         3432 a         1653 c         1270 g         3228 t
ORIGIN      
        1 cttatataaa agttaaggaa gttcaatgaa tgccaaaacc caagatatgg aacttgaaga
       61 gctctttaaa gaaaacgaaa aagattatat cacttacgaa aaattagtaa aatacttcag
      121 caagcaacct aattcagcca ctgccaaaaa agtccaaact ttaatgaaaa agtataaagt
      181 acagttattt tcggctgctg aaattgcaca aatgaaaaat atagaagatg caaaaagatt
      241 gcaagaagaa aaacaaaaat tgcaagatac tagtcttgag aatgaatttg atttagccaa
      301 tgaaaatgat ttgctagaat ggagcagatc ggattctcct gtgcgtatgt atctaagaga
      361 aatggggcaa attgcacttt taaataaaga tgaagaaatc gaaatttcca aaaaaattga
      421 acttggtgaa gatattatca tagatgcttt ttgttccgtg ccttatttga ttgactttat
      481 tttagattat cgtgaaccac tgatcaatag agaaagaaga gtaaaagaac ttttcaaaag
      541 ctttgatgat gaagaaaaaa atgatgataa gcttgatgaa ctagaggacg aggatgaaga
      601 aaacgatgaa gaattagaaa atgaagaaga aactcctaaa aaaacaagca aaaaagaaga
      661 tgaaagaact ttaaaagtca tagaaaaatt taaagcttta gagaaggcaa aaaaagattg
      721 gctaaaagtt tctaaagata aagaaagtgg agatgaaatt ttagacaaac ttggaattgc
      781 ttttaagaaa aatattctaa aagaaaagct gatggatcta ggtccaactt ctaaactcat
      841 cagtgaaatt gtaaaatcaa tggaaactgc cttaaaaagc gatgaagaat tcgataaaga
      901 attaaaacgc ctagaatacc gtttgccaat gttttctgaa gaattaaaaa atcgtcatgc
      961 taatatctta aaagatatta caaaattaag caaggaagaa attaccgaaa gagcgcttga
     1021 aacgactatg gtaagcactt acatggagat aaaaaaactt tttcaaacta aagaagcgag
     1081 cgagaaaagc tttgacttag aaaaagagcg cttgaaagaa attttagagc aaatcaaacg
     1141 aggtaaaaaa atttctgatg aagctaaaac tagaatggct aaatcaaatt tgcgtcttgt
     1201 tgtaagtatt gctaagcgtt atacaaaccg tggtttacct tttttagatc ttatccaaga
     1261 aggcaatata ggtcttatga aagcagtgga taaatttgag tacaaaagag gatataaatt
     1321 ttcaacctat gcaacttggt ggataagaca agctatttca agagcgatcg cagaccaagc
     1381 tagaactata agaataccta ttcatatgat agaaaccatc aatcaaatca ataaaattat
     1441 acgcgagcat ttgcaaaaag acggaaaaga gcctgatgta agtgttatag ccaaagaagt
     1501 aggacttagt gtggataagg ttaagcaagt gattaaaatc acaaaagagc ctatttcact
     1561 tgaggcgcct attggtagtg aagatgatgg caaatttggg gattttgtag aagatagaaa
     1621 ttcactctcg cctatggatc acattttaaa agatgattta aaagagcaaa ttgatgaagt
     1681 tcttgatcaa ctaaacgata gggaaaaagc agttattcgt atgcgttttg gtctaatgga
     1741 cgatgaaagc gatagaactt tagaagaaat aggtaaagaa ttaaatgtta cacgcgaaag
     1801 agtaagacaa atagaaagct ctgcaattaa aaaactcaaa catccaaaag tgggtagaaa
     1861 actcaaaaac tatatcgagg gttggaagta attaatccaa ctccttttcc tcttttaatt
     1921 ttctcacatg ttcaaaaaat atcacttttc cgctatgcgc ttttaaatcc ttaaagtctt
     1981 ctatgtcaaa ttctaagcaa agcatagatg aagtaggaaa agaagtcaaa cataaagagc
     2041 ctaaaaattc tccaagttcc attaaagtag gattatgccc tactaataaa acttcattat
     2101 attttttatc gatagtttgt aaaatttgat atattttaga caaattagca agataaagct
     2161 catctataaa ttgaattttt tccttgtcaa aattataaaa ttcggctatt tttttagctg
     2221 tcttagcagt gcgtttagat ggacttgaaa gtataaaatc aaattttatc tcatgggttt
     2281 ttaaattata aaaaagcttt tctaagtctt ctttacctct tttatttaac ttcctatcaa
     2341 aatcttgcac ttcctcatcc ttaacagcct ttgcatgtct taatatatat atttttttca
     2401 aatttttctc cttaacttcc ctaaaaaata tccacaaata aaaccaaaaa tatgcccata
     2461 ccatgcgaca tttacaccca taagcaatgg agcaaaactc attagtaaaa tagcgactat
     2521 aagacccttt gtactacttt tatcaagaaa agcataatac cccatcaaaa cacaaattgc
     2581 tccacttgct cctacaagat ttatcatccc accaaaataa taaaaagaaa aatatacata
     2641 aaaagcactc aaaagcgaac acatcaatcc gccaattata tacaataaaa agaaacgcaa
     2701 agcacctaaa taagactcta aaatacgacc aaattgaaat aaaactatca tattaaggat
     2761 gagatgagtt aaatttccat gcataaacat tgaacttaaa atttgccaat aagctccttt
     2821 gaaaaacaaa atatttaacc caagcaaatt ataataccca taaggaattg taaaatagaa
     2881 taagatattt aagagaatca gtaaaattac aaccaaaaac aacctttaaa atatttatgt
     2941 tattgtcttg aaattcacat aaaattcaca taaattcact aaaatttagt gcaaaataat
     3001 aaataggaaa aacttttgaa aataaaattt tacggcatta tagctatctt atccactttt
     3061 ttaaacgctg atattataat atctcccgat gagcttccaa gtatttctaa agaattttta
     3121 aaaaataatt ttcaagctcc cataggtata gtacaaagag ataagcacgc ttatgaggtt
     3181 tatttgagcg atgggacaga attagaattt gaaagcgatg gttcatggaa agagatagaa
     3241 agtaaggtct ttccttttga tttaaatttt ttacctccaa atttaacaaa tatcattcaa
     3301 aacaaatttc ccaacacaaa agctagagaa atcgaaagaa aaatcaatta ttacaaaatc
     3361 aagcttacta acaatataga agtacatatt gattttaatg gtacgatttt atatacagaa
     3421 tatgacgact aaaacaattt attaaagtct aagatagatg acaaaatcta aagccatata
     3481 gatactttaa acctgaacta cttctttaac atcgttatac tctatctttt ctttttcaag
     3541 taaaatttta gcaagcgttg aaattttttc ttttaaaggg aataaaaact catctagctc
     3601 ccttttaatt tcgtttaaat ttggttcttc aagcatacca aagcttatca tataatcaag
     3661 caattcttta acttttaaaa aatcattctg tgagtttgta tagctttcat tataaatcaa
     3721 actcatagct ctagagcctg ctaaataaac cttaatgcga ttgataagtt ctgattttga
     3781 gcgaatggca tgctcgtatt ccttaaaacg ttcttcaata agagtaattt tctcaaatcc
     3841 tatatcaaaa taatacgcac tcaaagcttt tgcggcctga taagtcgctt gtataccctt
     3901 ttcttcatca ttaaaactta gaattttttt ctttcctaaa agcaccttat ttagtacagc
     3961 ataaaaatcg ctttcttcca ccaaagaact atttcttctt aaagcattga tagccgcttc
     4021 attaactaag gtttcaagtc cagcaccgct aaaacctaca cttgcttttg caattttatt
     4081 taaatcaata ttgttatttt tacccttcat gtaaatttct aaaattttaa gcctatcttt
     4141 aaaatctggc aaagataaga aaatgcgtct atcaaaacgc cctgaacgaa gtaaagcagg
     4201 atccattagc tcgattttat tagtcgcggc gattacgata acaccactat tatcttcaaa
     4261 accatccatt tgggttaaga gttgatttaa ggtgctatct ctttcgacat tagacatttc
     4321 accccttgct ttacccaccg catcaatttc atcaataaaa ataatacttg gagccatcat
     4381 tttagctcta gaaaaaagct cccttactct tttagctccc attcctacat aaatttcaac
     4441 aaaacttgat ccgctttgat aaaaaaaagg tacccctgct tcgcctgcaa ccgccttagc
     4501 aatcaaagtt ttccctaccc ctggaggacc taccattaaa acaccctttg gcatttttac
     4561 accaaattct ttgtattttt taggattttg caaaaaatcc acaagttcac taagctccat
     4621 ttttacttca ctcacgcctg ctacatcatt aaaggtgata ttagaaatca caggttttat
     4681 attggaactt tctaaatttg tggtagaagt ttgggtttga gttttactag atataggata
     4741 cttagctaat tctttttttc gtgcaaaata aacaaaactt aataaaagcg cgataagaaa
     4801 tacaaatata acaaaaaata cccacaaagt actgtctttt ttgatttcca caggaacttt
     4861 tgataaaagg gttttaatat ctacaccatc ttttacgatc acatagctct cacccttagc
     4921 tttaagccaa atttcatcct tatcaatcac tgctttttcg attaaatttt gacttaataa
     4981 actttggtaa agattttcat ctatgtattt aggttcattt ttaaaataca aaattccaaa
     5041 aagcaaacac aagataagaa aagatatcaa tataattttt ttgtttttca ttttttaccc
     5101 tctaagtctg cgaaattatg cttttcttgc acttcatatc gctctaattt tagccattct
     5161 tttgctatat atttactgct tttgattttt attttattaa aaaactgatc ataaccttca
     5221 aaaaaaccat ctttttgatt ttcaactaaa atttcaagtg gagttttaac tctttttcta
     5281 aattcatagt tattattttc tataataact tttaaagtat ttaatctttc tttagccaca
     5341 gcaccattta tagtatcttt catggtggct gaatgagtgt tgtttctagg gctaaaaata
     5401 aaagcatgga tatgagtaag tggaaattct tgaaaatgct ttaaagcctc atgccaaagc
     5461 tcctcggttt cccctggatg ccctacgata aaatcagtcc ccaaagcata tcctttactg
     5521 gctatggtat taaaaagctt caagtcatta tctgtatgcg atcttcttct catgatgcga
     5581 agcatttttt cacttgtatg ttgcaaagcg atatgtaaat gtcgctccat ccatctttca
     5641 tctaaaattt ctaaaaaact ttcatcaatt tgagcaggct ctaaactacc aagtcttatg
     5701 cgttttatac ctgaaatttg acccattttt tgcaaaagct tacctagtgt tgttccattt
     5761 ttaagtccgt aagaacctat gtttgtacct gttaaaacca cttcgctata gccatttgct
     5821 cctaaaattt caacctgcct taacaaagcc tgctcatcaa cacttcttga tttcccacgc
     5881 acgctaggga taatgcaata agaacaagca aaatcgcaac cttcttgaat tttaacaaag
     5941 gctttggtgt gattttcgta ctcacaaact atatctttat caataaaatt taaatttcca
     6001 agctcgtaaa aacttgtttt taaacccaaa aattcattga ttttatcttt atttgatgct
     6061 ccaagcaccc caaaaacttg ttttttatcc aaaagttctt tgcctttact cactgcaccg
     6121 caacccgtaa gtataactct aacacccttt ttttgcatgg aattaatata agactttatt
     6181 ccgctgtctg caccattggt aacagtgcaa gaattaacta cgataatctg tgctttttct
     6241 tcatcattta cgatttcata atcttttaca taacttttca aaagctctgt atcgtatata
     6301 ttggtgcgac atccaaaggt tttaaaaaaa actttttctt tcaattgtta tcctttgtat
     6361 gaaaatgcat agaattataa tgagtctcaa aaggagcttg atttaaattt cctaaatata
     6421 aattttgaga tggataagct attttaatat cctcatgctt gttaaattct ttaataatct
     6481 ctttactgat agcgcttcga agtatcaatg ctgcgtatga atttgtcata taccaagcag
     6541 atattctcat cccccaatgt tcaaaaaaga caaaaaatct aggctctact ttgggatttc
     6601 ttatgctgta ttcattttgc agtcttttca ttgttttttt ggctagttct gtatagccct
     6661 ttgctaggcg gttgacaact tcttcaacta tagcttgagc tttttctatg ttagaatcaa
     6721 aagtaacgct aatatctata ccatctaaaa tcgttttcat tccatgatga gtataattag
     6781 aaataagatt tgtaaaaaca taattattgg gtatgaaaac aatacgccct gctctacgat
     6841 ttttactata agtttcaagt gtaatatctt catataaagt gatacgcaaa aaagaaatat
     6901 ctataatatc ccccacataa gtagtatcat tttgaaaaac ttttacacga tcccctactc
     6961 taaagcttcc accaaaaacg atcacacacc atccaagcat agacataaac atatctttca
     7021 tagcaatagc taagcctgct gatgcaaaac caagtatagt aacaagatag gttatatttt
     7081 ctatataagc aaaaagcaaa ataagaaaaa tgatattaag gttaataaaa ttgataatct
     7141 ttgttgctgt gtagtatctt tcattatcct ttatgtattt tttagcaaca agttttaaca
     7201 taaaagcaat agctacaaca ataacaatag ctatgactat attaatcgct cttaaaccct
     7261 gcgctttgat ttcagcactt actcttgcaa tttcatcatc aatctttttt tcataaacag
     7321 aataagaaac actagcaaat tttaaggctt gatcaaattc ttcaagtttt ttatctgatg
     7381 cttttaatgc ttctatattt tcgatatttg attctagatt gactaattct ttgagttcta
     7441 aattcttttc tctgattttt tctaccaaat tcttaaaatc attaaattta aaggcatatt
     7501 cttctttttc tcctcttaat tttttaatat gagaaaaagc cccaataatc gcaaaaggat
     7561 tggtgagctt agataaagtt tctatatctt caggtgcact aagactatgg gcaaagttta
     7621 attctttata ctctttaagg acattaagct gttcttctaa agttgctatt tttcgtttta
     7681 attcatcttg taaatgcaca tcttctattt tttttaattc taaatttaag ataataagtt
     7741 catcatttat atcttgatat ttgataaaat tttcatagcg tacatcccaa atactagctc
     7801 caatgacagt gtctaaattg cttatttttt cattgatatt attaataata gtgcgattta
     7861 tatcgccaaa agcaaaaaga ctaaagcaaa gtaaaagaag gatttttctc attgaaattc
     7921 ttccaaggtt tccaatatca tttctttggc aatatcacct tttatgagtc ccttgcccaa
     7981 agaatttgca agaatgaaat ttaatttttg attagcactt tttttatcca tgaaaaaagc
     8041 ctcataaaac tcgttgatgt tttcaatttt ataatgcgtt ggcaaattaa attgaagtaa
     8101 aattttttct attctctcgc attcttcttt acttaataat cctaatttta aagccaagcg
     8161 atttgccata ttcatcccta tagccactgc ttcaccatgt aaatattgtt tataatctgt
     8221 aaaattttct atcacatgag caaaggtatg accataattt aaaagcattc ttaagcctga
     8281 ttccttctca tcacactcca caactcttgc cttaagctct acgcttttag aaataatttg
     8341 agtaaaaatt tcgttttcgc aagtcgcatt taaaaaactt tccttatcaa tcgcttctat
     8401 aaattcaagc aaatccctat caaacattgc tgccattttg ataaattcag ccatccctgc
     8461 ggccaattct cttctaccta aggttcttaa aaattcactt tcgcaataca cagctttagg
     8521 ctgataaaaa gtgcctatta aattttttcc aaaagcatta ttaactcctg ttttgccacc
     8581 tactgcagca tccacacaag ctaaaagcgt agtagggata ttgataaaat caatccccct
     8641 ttgataaata cttgccgcaa atccacccat atcgctaatt actccacctc caaagcttat
     8701 caatatactt tttcggttaa gtttggaatt aaacatttga tttaaaattt tttccaaagt
     8761 gagtaaattt ttgtattctt caccatcttc tatcgtcgct ataaaaagct ctttagcctt
     8821 aattttagac aatagtgttt ttaaatggag tcctgaaatt ttaggatttg aaagtataaa
     8881 aaccttagta tctaattcta aattatccaa ctcgtctata taaaccttgt aagcgttttc
     8941 ttttaaatct acatttattt gcattgttct acttttattt tgaaattaaa tctattctag
     9001 caaattaggg ctaatcattt tcttagttct aagccataaa gctaagaaaa tttaaaataa
     9061 aaatcttttt tgaaacacta aaaaacaagc tcctaaaaaa ataatacttt atcataagcc
     9121 ttaaatgatt ctcattctac aggtatgaaa agttgataat tttgcctcat tttagaataa
     9181 tgtctattga gattagtgct taaacttttg ctaaattctc cctccaaaag ctctttttca
     9241 aaactcacaa attgcaacaa atctgcacgg taagataaag ataaaatagg attttcatca
     9301 tttttgctta taatttggat attcttatcg taaagcttag ataaacttcc aaaatactcc
     9361 tccatatctg tagtattttg caaattagga ttataataat acaaagtaat atcaaaatca
     9421 agttgcttac taagatctgt gatcacattt gcattatttt caagttcggt ttcattagta
     9481 cttaaaataa cagcattttg aatattttcg aatttaccct cacctatttt caaaatagga
     9541 attttcaatt caaaaaaagt ttttttctct tgctcaaaat gtt
//
LOCUS       DAQUWA010000068         9459 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.068, whole genome shotgun sequence.
ACCESSION   DAQUWA010000068 DAQUWA010000000
VERSION     DAQUWA010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9459
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.068"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..593
                     /locus_tag="R8X70_001509"
     CDS             <1..593
                     /locus_tag="R8X70_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929270.1"
                     /translation="TNPSMVKDAILREFEIPKLNLGVIESTNNRRLEVSFIDEPQLYF
                     VLMRSDKPNAKTFRMWVTKEVLPSIRKKGYYGSINKNNTTIDSNIYYKELCDRLLIEN
                     KELKSENINLKRHINGELYLEFLNKLNTFSRIHFKNSKSKALDYIYKTIAIEFMCPTY
                     SNFDISDLESDPRYLRYAIDLCNDAISNNFLSRKLI"
     gene            608..1975
                     /locus_tag="R8X70_001510"
     CDS             608..1975
                     /locus_tag="R8X70_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
                     /protein_id="HEF2929271.1"
                     /translation="MFLKKSEEEKTFIGIGFDLEDKKQEKLLEIYQIDDNSKNHTFVF
                     GSTGVGKTRLIEGLIEQDIPKGKNVVIIDPKGDIGLFSKMVEIAKKSNREKELMFLSP
                     IYPEYSIKINPLANYYMEEEIIAHIVSGVPAKDEFFYNVANETTTAVVKALLIIRRYE
                     KLEKPLNFEEIAEKVYYEGLKELQSELKEIQSNGFEDDEIARLLALYDRVLSSPQDYF
                     AKVSSTLRTTLTQMTMGNVGKIIGTAQENTFIKRLQENQGVLLYIMTGSMLTRQVSSI
                     ISKVTISMIQSCVGRVYASGKKFDKTLKIYIDEAASSVYRGIETLYAQARGAGVAIMG
                     LTQSAADLAAEIGQDGANRLLELTNTKIIMRLNDTKSSKMISDLGGKKRAYSYFLTVE
                     GGITSREVEELNIEVDDVTNLQKREFFYFGFEGRFKGKTLKVNDGKLVVDMPNVTQKN
                     EDFNV"
     gene            1968..4373
                     /locus_tag="R8X70_001511"
     CDS             1968..4373
                     /locus_tag="R8X70_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEF2929272.1"
                     /translation="MFDLIENVMSFIYRHQLIRKVVWQIIITFVSIFLFLTFLFWVNL
                     EKMGYSSFNFSLLLNLQAYIFLLWEYSREIACFLIIEQAFFILLLWYMNNKLKNPSND
                     KEVAHIHIKELAKIWLEDDNTPMIDTSRQATEKANIIMVNKQVRDSIISLANLKQDIS
                     QIFLNDIIKPNLEKIHPKHLEMIIKLLQLLEENIACPSVVQLFEGDPNSAYGKISARR
                     KDGERIDTVTLDGKTRFDIYEKISLLRHSLNVAYKIIELLNESKEYKSFKKTLFGKAI
                     IVALGHDIGKINNFTLRESYIKEQRLKGDSKQAFMNLKRMQEHQKISYIIFYELFKNY
                     PDLKELATVVQGHHLGSIDKDDKLLKLLIDADKQTRDYELDAYLQNSEEFEKIRNKEL
                     ESIITTVPQKNNLAHENTQKTISKTPEKKTQTIQNKTQNESTENEISILDLKELQDRF
                     VLNFNEFKKQFFLFVAEDNSKEFQELVYTFAFKNTEKEFYKNKKDLFILVECGVINGN
                     RTDTMNYFYDLSDEINKKLNKKIKIGFAMFRDCKDINEAIDGCKKALEYAKNNNQVVY
                     YDYKDLKISNSDKILISDNAEVKITESVKIQEKTDTITTNNQVNTLEEIDTLKQKTID
                     TQIIENMFEMIESKVQEVEYSLSQEENFDIPLIEAKFIEIIKSKINTFKRKGFAKIPQ
                     AISFKRFVLFSHECLLESLAKALNVKNENLNAKLNFLIRYYRNHPDENKRLIWFVNVE
                     KGFYYSTYLLRFDEKQDEVFFCVPFDGKRAFGMSVSELSIHKDNSGLRNCIVKPYVKK
                     EEK"
     gene            4370..4666
                     /locus_tag="R8X70_001512"
     CDS             4370..4666
                     /locus_tag="R8X70_001512"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929273.1"
                     /translation="MKKRRADLLKKHNSKIVLADTLESEAMVDLAMKANDIFLKLKKT
                     AGVGLDFKDADEMLMLWNLVLVKSSQTLEQISQKIDMKYDEPFTITLAREKLEK"
     gene            4663..5103
                     /locus_tag="R8X70_001513"
     CDS             4663..5103
                     /locus_tag="R8X70_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEF2929274.1"
                     /translation="MKAIFFLTSLLFANLLFAQKNYFIQAGEKFGINPQLLWTIAYKE
                     SRLTPNIISKPNKNGTYDIGIMQINSIHLPRLKKQYGINENDLLRPKINIFVGAEILK
                     MCLDKHGLNEEGITCYNGRIINNPYGKEVIKLLKKARITNGKIN"
     gene            5122..6018
                     /locus_tag="R8X70_001514"
     CDS             5122..6018
                     /locus_tag="R8X70_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HEF2929275.1"
                     /translation="MNNLLEKNINEVNEMLIKSLDDLPPLPETIQKLQEYIATHGSNI
                     VIDEIANIISTDPLITANLLHLTNSAYYGFSKEIKTVNQALVLLGVSNVKNMIIADYA
                     KSSFVINLSPYGIETDRFLALIHEQTNFISTWLMEEDKMLCHNLIPCVMMLRLGIMVF
                     SNFLIQNNIDKKFLLHLSKNNFNNILRLEREFLGVDHISFLSNLFKVWNLDEDLIEII
                     SSLDYLGSTSAKVKKETYALAAIEALFSPEKNAYDEFCVQKAYQILKDAKANGVDFNL
                     ENFLNKLPEKFIEILSKSKEQL"
     gene            6015..6230
                     /locus_tag="R8X70_001515"
     CDS             6015..6230
                     /locus_tag="R8X70_001515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929276.1"
                     /translation="MNIVDLVKTIESIENPQNLKIIREGACFYMCLGENKKYFYFFKA
                     NSKNKESLPYTLTLDDLKSDEWKILKD"
     gene            6422..9319
                     /gene="cas9"
                     /locus_tag="R8X70_001516"
     CDS             6422..9319
                     /gene="cas9"
                     /locus_tag="R8X70_001516"
                     /inference="COORDINATES: protein motif:HMM:TIGR01865.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HEF2929277.1"
                     /translation="MKIIGFNLGIANIGWALRENDEIIDCGVRVFDIPENPKNGNSLA
                     LERRENKARMKIVKRKKARMLATKTFLKKEFNVDLSKLFLIGSTQSIYELRTKALSSL
                     ISKEELSAIILHIVKHRGYDDSALKNENGTIIEALNKNKEAMLKFKSVGEYFYKNFVQ
                     NKEVKKIRNTTEDYSNSVPRSLLKQELDLILDKQKELGLIKNADFKAKLFEIIFFKRP
                     LKDFSNKIGNCIFFENEKRAAKNTISACEFVALGKVVNLLKSIEKDIGIVYEKDSINE
                     IMSIILDKTSISYKKIRDILNLPQDINFKGLDYSKNNAENSKLVDLKKLNEFKKALGD
                     GFTNLDKDILDSIATDITLTKDTATLKEKLKNYNVLNAEQIEKLSELVFNDHINLSLK
                     ALKQIIPLMYEGKRYDEACELCNFTIAKNQEKSEYLPSLEKTRFAKDISSPVVIRAIC
                     EFRKLLNDIIRRYGSVHKIHLELTRDFGISFNDRKKIIKEIEQNEQSRIKALETIKEL
                     KLEETSKNIQIVRLFEDQKGICPYSGLKMDLKCLDELVIDYIRPYNRSLDDSYSNKVL
                     TFKKLNDLKQGKTPFEAFGEDEKLWAEINERIKEYNGKKRFKIFDKFFKDKKPFDFTE
                     QTLQDTRWLTKLVASYLNEYLSFLPISEDENTALGYGEKGSKQHVILSSGMITQMLRN
                     FWYLGFKNHKNYKNNAMDAIIVAFTTNSIIFAFNNFKKELDLAKAEFYANKISESDYL
                     LKRKFLPPFSGFKEQALEKVKNIFVSHSLKIKNKGTLHELTPLKIKELKNTYGDLDLA
                     VKLGKIRKYNDKYYANANGSLVRSDLFIDKKNKFHAVPIYKADFSTKKLPNKTPATTS
                     NGETKEGIEMNENYNFCMSLYKNTPISVKIKGMKESIICYYHGFNTSGSKITYKKHDN
                     NYHNLSEDEMVVFRKNDKESIAVGKILEIKKYSISPSGELSLIENEKRKWF"
BASE COUNT         3847 a         1130 c         1479 g         3003 t
ORIGIN      
        1 ttacaaatcc atctatggtt aaagacgcta ttttaaggga gtttgaaatc cctaagttaa
       61 acttaggggt tatagaaagc acaaataata gacgcttaga agtaagtttt atagatgagc
      121 cacagcttta ttttgtttta atgagaagtg ataaaccaaa cgcgaaaact tttagaatgt
      181 gggtaacaaa agaagttttg cctagtatta gaaaaaaagg ttattatggt agtattaata
      241 aaaacaatac aaccattgat tctaatatat actacaaaga attatgtgat agattattaa
      301 ttgagaataa agaactaaaa tctgagaata ttaatttaaa gcgccatatt aatggagagc
      361 tttatttaga atttctaaat aaattaaata cattctctag gattcatttt aaaaacagta
      421 aaagcaaagc actagattat atttacaaaa ccatagctat agaatttatg tgtccaactt
      481 atagcaattt tgacataagt gatttagaat ctgatcctag atacttaaga tatgccatag
      541 atttatgcaa tgatgcaata tctaataatt ttctaagtag aaaattaatt taaaataaag
      601 tgcaaaaatg tttcttaaaa aatcagaaga agaaaaaaca tttatcggca taggttttga
      661 tttagaagat aaaaaacaag agaagctttt agaaatatat caaatcgatg ataattctaa
      721 aaatcacact tttgtatttg gctccacagg tgtaggtaaa acaagactca ttgaagggct
      781 tattgaacaa gatattccaa aagggaaaaa tgttgttatc attgatccta aaggtgatat
      841 agggctgttt tcaaaaatgg ttgaaatcgc taaaaaaagt aatagagaaa aagaacttat
      901 gtttttaagt cctatttatc ctgaatattc gatcaaaatt aatccgttag caaattacta
      961 catggaagaa gaaatcattg ctcatattgt ttcaggtgtt cctgcaaaag atgagttctt
     1021 ttataatgtt gcaaatgaaa caaccacggc tgttgtaaaa gctttgctta ttattaggcg
     1081 ctatgaaaag ctagaaaaac ctttaaattt tgaagaaatt gctgaaaaag tttattatga
     1141 aggtttaaaa gagcttcaat cagaattaaa agaaatacaa agtaatggtt ttgaagatga
     1201 tgagattgct agattgcttg ctctatacga tagggtttta tcatcaccac aagattattt
     1261 tgccaaagtt tcatcaactc ttagaaccac gcttactcaa atgaccatgg gtaatgtagg
     1321 aaaaattata ggtaccgcac aagaaaacac ttttattaaa agattacaag aaaatcaagg
     1381 cgtgctttta tatattatga caggttctat gcttacaagg caagtgtcaa gtattatttc
     1441 caaagtaacc atttctatga ttcaatcttg cgtgggcagg gtttatgcct caggaaaaaa
     1501 atttgataaa acattaaaaa tttacattga tgaagctgct tcttctgtgt atagaggtat
     1561 agaaacttta tatgcccaag caaggggtgc aggagtagct attatggggt taactcaatc
     1621 agcagctgac ttagcggctg aaataggaca agatggggca aacagattat tagaactcac
     1681 taacactaaa ataattatgc gcttaaatga tacaaaaagc tctaaaatga tttcagatct
     1741 agggggtaaa aaaagagctt attcttattt tttaaccgta gaaggaggaa ttacttcaag
     1801 agaggttgaa gaattaaata ttgaggttga tgatgtgact aacctacaaa aaagagaatt
     1861 tttttatttt ggttttgaag ggcgttttaa aggaaagact ttaaaagtga atgatggaaa
     1921 attagttgtg gatatgccta atgtaactca aaaaaacgag gattttaatg tttgatttaa
     1981 ttgaaaatgt gatgagtttt atttatcgcc atcaactcat tagaaaggtt gtttggcaaa
     2041 ttataatcac tttcgtatct atttttcttt ttttaacctt tttattttgg gtaaatttag
     2101 aaaaaatggg atactcaagt tttaatttta gtctattatt aaatttacaa gcctatatat
     2161 ttttactttg ggagtattca agagaaatag cttgttttct aatcatagaa caagctttct
     2221 ttattctatt gttatggtat atgaacaata aactcaaaaa tccatcaaat gataaagaag
     2281 tagcacatat acatattaaa gagcttgcaa aaatttggct tgaagatgac aatactccta
     2341 tgatcgatac ttccagacaa gccactgaaa aagctaatat tatcatggta aataagcaag
     2401 tgcgtgattc tattatttct ttagctaatt taaaacaaga cataagtcaa atctttttaa
     2461 atgatattat taaacctaat ctcgaaaaga tccatccaaa gcaccttgaa atgattatta
     2521 aattacttca attgctcgaa gaaaatattg cttgtccaag tgttgtgcaa ctttttgaag
     2581 gagatcctaa tagcgcttat ggaaaaatat ctgctagaag aaaagatgga gaaaggattg
     2641 atacagttac tcttgatgga aaaactcgct ttgatatata tgaaaaaatt agtcttttaa
     2701 gacattcttt aaatgtagct tacaagatta ttgagttgct aaacgaaagt aaagaataca
     2761 agtcttttaa aaaaacattg tttggtaaag caattattgt agccttagga catgatatag
     2821 gcaagattaa taattttaca ctaagagaaa gctatatcaa agaacaaaga ttaaaaggtg
     2881 attcaaaaca agcttttatg aatttaaaaa gaatgcaaga acatcaaaaa atttcctata
     2941 tcatctttta cgaactcttt aaaaactatc ctgatttaaa agaacttgct accgttgttc
     3001 aagggcatca cttaggtagt attgataaag atgataaact tttgaaatta ttaattgatg
     3061 cggacaaaca aacaagagat tatgaattag atgcttattt gcaaaatagc gaagagtttg
     3121 agaaaataag aaataaagaa ttagaaagta ttattacaac agttccgcaa aaaaataatc
     3181 tagcgcatga aaacacccaa aaaacaattt ctaaaacacc agaaaagaaa actcaaacca
     3241 ttcaaaacaa aacacaaaat gaaagcactg aaaatgaaat ttcaatttta gatttaaaag
     3301 aacttcaaga tcgatttgtt cttaatttca atgaatttaa aaagcaattt ttcctttttg
     3361 tagccgaaga taattcaaaa gaattccaag aacttgttta tacattcgct ttcaaaaata
     3421 cagaaaaaga attttataaa aataaaaaag atttatttat acttgttgaa tgcggcgtga
     3481 ttaatggaaa cagaaccgat accatgaatt atttttatga tttgagcgat gagattaata
     3541 aaaaattaaa taagaagatt aaaataggat ttgctatgtt tagagattgc aaagacataa
     3601 atgaagctat cgatggttgc aagaaagcat tagaatacgc caaaaataat aatcaggttg
     3661 tttattatga ttataaagat ttaaaaatat caaatagtga taaaatatta atttcagata
     3721 acgcagaagt taagataact gagagtgtaa aaatccaaga aaaaacagat acaatcacta
     3781 caaataatca agttaataca ttagaagaga ttgatacatt aaaacaaaag actattgata
     3841 ctcaaatcat agaaaatatg tttgaaatga ttgaaagcaa ggttcaagaa gttgaatatt
     3901 ctttaagtca agaagaaaat tttgacattc cgctaattga agcaaaattt attgaaatta
     3961 taaagtccaa aattaacact tttaagcgta aaggttttgc taagattccg caagctataa
     4021 gctttaaaag atttgtgtta ttcagccacg aatgtctttt agaaagtctt gctaaagcac
     4081 ttaatgttaa aaatgaaaat ttgaacgcca aacttaattt tttaattcgt tattatagaa
     4141 atcatcctga tgaaaacaaa agattgattt ggtttgttaa tgtggaaaaa ggcttttact
     4201 attcaactta tcttttaaga tttgatgaaa agcaagatga agttttcttt tgtgtgcctt
     4261 ttgatggtaa aagggctttt ggaatgagtg tttcagaact tagtattcat aaggataata
     4321 gcggattaag aaattgtatt gttaagcctt atgtaaaaaa ggaggaaaaa tgaaaaaaag
     4381 aagagccgat ttacttaaaa aacacaattc aaaaatcgtg cttgcggata cattggaatc
     4441 tgaagctatg gttgatttag caatgaaagc caatgatatt tttttaaaac ttaaaaaaac
     4501 tgcaggcgtg ggtttggatt ttaaagatgc agatgaaatg ctaatgttgt ggaatttagt
     4561 attagtcaaa agctcacaaa ctcttgaaca aatttcacag aaaatagaca tgaagtatga
     4621 tgaacccttt acaataactt tagctcgtga gaaattagaa aaatgaaagc aatctttttt
     4681 ttaacctcct tactttttgc taatttgctc tttgctcaaa aaaattattt tatacaggca
     4741 ggagagaaat tcggaatcaa tccgcaattg ctttggacca ttgcttataa agaaagtcgc
     4801 ttaaccccca atattattag caaaccaaat aaaaatggta cttatgatat aggcattatg
     4861 caaattaata gcattcattt accaagatta aaaaaacaat atggtattaa tgaaaatgat
     4921 ttattaagac ctaaaattaa tatttttgta ggagctgaaa tattaaaaat gtgtttagac
     4981 aaacacggat taaatgaaga aggtattact tgctacaatg gaagaattat caacaatccc
     5041 tacggaaaag aagtaattaa attactcaaa aaagcaagaa taacaaatgg aaaaattaat
     5101 taaatttcaa aaggagagat gatgaacaat ttattagaaa aaaatatcaa tgaggttaat
     5161 gaaatgctca ttaaaagttt ggatgatttg ccaccactgc ctgaaactat tcaaaaattg
     5221 caagaatata ttgccacaca tggaagcaat attgttattg atgaaatagc aaatattatt
     5281 agtacagatc ctttaattac agctaattta ttgcatttaa ccaattcagc ttattatggt
     5341 ttttcaaaag aaattaaaac tgttaatcaa gccttagttc ttttgggggt aagcaatgtt
     5401 aaaaatatga ttattgctga ttatgcaaaa agttcttttg taatcaatct aagtccttat
     5461 ggtatagaaa ctgatcgctt tttagcttta attcatgagc aaaccaattt tatttctact
     5521 tggctaatgg aagaagataa aatgttgtgc cataatctaa ttccatgtgt tatgatgcta
     5581 agattaggca tcatggtatt ttcaaatttt ttaattcaaa acaacataga taaaaaattt
     5641 ttattacatt taagcaagaa taattttaat aatatattaa gactagaaag agaattctta
     5701 ggagttgatc atatatcttt tttatcaaac ttatttaaag tttggaattt agatgaagat
     5761 cttattgaaa ttataagctc tcttgattat cttggttcta ctagcgcaaa agtaaaaaaa
     5821 gaaacatacg ctttagctgc aattgaagcc ctttttagcc ctgaaaaaaa cgcttatgat
     5881 gaattttgtg tacaaaaagc ctatcaaatt ttaaaggatg ctaaggcaaa tggagttgat
     5941 tttaatttag aaaatttttt aaataaattg cctgaaaaat ttatagaaat tttaagcaaa
     6001 agcaaggaac aattatgaat atagttgatc ttgtgaaaac aatagaaagt attgaaaatc
     6061 cacaaaatct taaaattata agagaaggtg cttgctttta catgtgttta ggtgaaaata
     6121 aaaaatattt ttattttttt aaagctaatt ctaaaaataa agaaagtctt ccttatacac
     6181 tcacattgga tgatttaaaa tctgatgaat ggaaaatttt aaaggattaa aatgaataca
     6241 atacaaaaac tcagaagaga actaaataat cagaaactag attataattt tttgatattt
     6301 tttgccttat attttgggct tttttttggt ttttgtgtaa taggtttttt tagcaccaaa
     6361 aaagcaatta aaacatattc acaattaata gaaaaatctc aaaaagaatt tggagaaaaa
     6421 aatgaaaatc ataggattta atttaggtat tgctaatatc ggttgggcat taagagaaaa
     6481 tgatgaaatc atagattgcg gagtaagagt gtttgatata cctgaaaatc caaaaaatgg
     6541 taattcatta gcccttgaac gccgagaaaa caaagctcgt atgaaaatag tcaaaagaaa
     6601 aaaagcaaga atgcttgcaa ctaaaacttt tttaaaaaaa gagtttaatg ttgatttatc
     6661 caaacttttt ttaatcggat caactcaatc tatctacgaa ttaagaacca aagctttaag
     6721 ttctttaatc agcaaagaag agttatctgc tattatttta cacattgtta aacatagagg
     6781 atatgatgat agtgcattga aaaatgaaaa tggaactatc attgaagccc taaataaaaa
     6841 caaagaagca atgcttaaat ttaaaagcgt aggtgaatat ttttataaaa attttgttca
     6901 aaacaaagaa gttaaaaaaa taagaaatac cacagaagat tattctaatt ctgttccaag
     6961 aagtttatta aagcaagaac ttgatcttat tcttgataaa caaaaagaat tgggattaat
     7021 taaaaatgct gattttaaag caaaactatt tgaaatcatc ttttttaaac gccctttgaa
     7081 agatttttca aataaaatag gaaattgtat tttctttgaa aacgaaaaaa gagctgctaa
     7141 aaataccata agcgcttgtg agtttgttgc tttgggaaaa gttgtaaacc ttttaaaaag
     7201 tattgaaaaa gatataggta tagtttatga aaaagatagc attaatgaga ttatgagcat
     7261 tattttagat aaaacaagca ttagttataa aaaaatcaga gatattttaa atcttccaca
     7321 agatataaac tttaaaggct tagattattc aaaaaataat gctgaaaact ccaaacttgt
     7381 agatttaaaa aaacttaatg aatttaaaaa agctttaggc gatggtttta ctaatttaga
     7441 taaagatata cttgatagta ttgctacaga tatcacctta accaaagaca cagcaacttt
     7501 aaaagaaaag ctaaaaaatt ataatgtttt aaatgcagaa caaatcgaaa aactctcaga
     7561 acttgttttt aatgatcata ttaatttatc tttaaaggct ttaaaacaaa tcataccttt
     7621 aatgtatgaa ggtaaaagat acgatgaagc ttgtgagctt tgcaatttta caattgctaa
     7681 aaatcaagaa aaaagcgaat atttgccttc acttgaaaaa acacgctttg ctaaggatat
     7741 ttcttctcct gtggttatta gagctatttg tgagtttaga aaattgctta atgatatcat
     7801 aagaagatat ggtagcgtcc ataaaattca tttagaacta acaagagatt ttgggataag
     7861 ttttaatgat agaaaaaaaa taatcaaaga aattgaacaa aacgaacaaa gtcgtataaa
     7921 agctttagaa acaataaaag aattaaaact agaagaaact tctaaaaaca tacaaatagt
     7981 tagattattt gaagatcaaa aaggaatatg tccttattca ggcttaaaaa tggatttaaa
     8041 gtgccttgat gaattagtaa ttgattatat acgcccttat aatagaagtc ttgatgatag
     8101 ttatagcaat aaggttttaa cttttaaaaa actaaacgat ttaaaacaag gaaaaacacc
     8161 ttttgaagct tttggagaag atgaaaaact ttgggctgaa atcaatgaga gaattaaaga
     8221 atataatggc aaaaaaagat ttaaaatttt tgacaaattc tttaaggata aaaagccttt
     8281 tgattttaca gaacaaacct tacaagatac aagatggcta actaaacttg ttgcgagcta
     8341 tcttaatgag tatctttcat ttttgcctat cagtgaagat gaaaacacag ccttaggcta
     8401 tggagaaaaa ggaagtaaac agcatgttat tttaagctca ggaatgatta ctcaaatgct
     8461 aagaaatttt tggtatttag gctttaaaaa tcacaaaaat tacaaaaaca atgctatgga
     8521 tgccattata gtagctttta caaccaattc tattattttt gcttttaata attttaaaaa
     8581 agaattagat ttagcaaaag ctgaatttta cgcaaacaaa atatctgaaa gtgattattt
     8641 gttaaaaaga aagtttttac caccttttag tggttttaaa gagcaagcac ttgaaaaagt
     8701 aaaaaatatt tttgtttcgc attctttaaa aattaaaaat aaaggcactt tgcatgagct
     8761 aacgccactt aaaataaaag aacttaaaaa tacatatggt gatttagatc ttgcggtaaa
     8821 attaggtaaa ataagaaaat ataatgataa atattatgcg aatgctaatg gttctttagt
     8881 gagatctgat ttatttatag ataaaaaaaa caaattccat gcagtgccta tttataaagc
     8941 agatttttct acaaaaaaac ttccaaataa aacccctgca actacatcaa atggagaaac
     9001 caaagaaggc attgaaatga atgaaaatta taacttttgt atgtcattgt ataaaaatac
     9061 tccaattagc gtaaaaataa agggtatgaa agagtctatt atttgttatt atcatggttt
     9121 taatacttca ggaagtaaaa taacctataa aaaacacgac aacaattatc acaaccttag
     9181 tgaagatgaa atggttgttt ttagaaaaaa tgataaagaa tctatagcgg taggaaaaat
     9241 acttgaaatt aaaaaataca gtataagtcc ttcaggtgaa ttaagtttaa ttgaaaacga
     9301 aaagcgcaaa tggttttaga tatttttgct caaaaaataa gaaaaaacat tgataaaata
     9361 ggcttttgag ataagtctat tttaccatat aaacaattaa taataggcta aaaccataaa
     9421 tgcagacatg ggaatttcga gtttatttta ccatataaa
//
LOCUS       DAQUWA010000069         9087 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.069, whole genome shotgun sequence.
ACCESSION   DAQUWA010000069 DAQUWA010000000
VERSION     DAQUWA010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9087
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.069"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            43..1137
                     /locus_tag="R8X70_001517"
     CDS             43..1137
                     /locus_tag="R8X70_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HEF2929278.1"
                     /translation="MIKKIEHYKNILISNFKGLIFTASIVFFAMYLSSVQSIKDTTHL
                     AAAAFAIIIGALLSPWFFKYQHHLQAGVHFSAKKLLRLGIILYGFNITLTELLSVGLK
                     GFILSMIVIFFIFILALIVGVKVFKLDKETSMLVGAGSAICGAAAVLALESSLKSDPF
                     KGILAVGTVVIFGLVFMFLYPIVFSLDLFPYFNQHAMGIFMGATLHEVANVAGAAEMA
                     KDMANFDQSASNIAIIIKMMRVILLVPFLLIITYFFAKNQHSSKEKTEKNISIPYFAF
                     IFLGVIVINTYLASRENFLGISTSDIISFGKLLCTLCIVFAMAALGLQIDFKKFLKSG
                     SRVFGLAFVLGLVLVFGGYFLTLFFRGILW"
     gene            1229..1801
                     /locus_tag="R8X70_001518"
     CDS             1229..1801
                     /locus_tag="R8X70_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929279.1"
                     /translation="MKKMFYSIAASLILATSSSAVSFNQDSLKVSFEGYKTEDMVGVG
                     GEFKDVKYKFSKNTKDLASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDT
                     DIKVVFQDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNSSQ
                     ALKALSDVAPGHGGISWPLVDIVFSADVVQ"
     gene            complement(1802..2402)
                     /gene="rsmG"
                     /locus_tag="R8X70_001519"
                     /pseudo
     CDS             complement(1802..2402)
                     /gene="rsmG"
                     /locus_tag="R8X70_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781929.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
     gene            complement(2399..2959)
                     /gene="ribA"
                     /locus_tag="R8X70_001520"
     CDS             complement(2399..2959)
                     /gene="ribA"
                     /locus_tag="R8X70_001520"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEF2929280.1"
                     /translation="MDIKISEIANLPSKWGSFQIQSFKEGEKEHLCIFKNTPQDILNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKHGGMVIYLRQEGRGIGLFNKVNAYAL
                     QDKGFDTIKANHQLGFKADERTYEIVEFILKHYKISKVNLLTNNPQKIHSIQDKIMAR
                     VPILINPNRFNANYLEVKQNQMGHLL"
     gene            3016..3999
                     /gene="hemB"
                     /locus_tag="R8X70_001521"
     CDS             3016..3999
                     /gene="hemB"
                     /locus_tag="R8X70_001521"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEF2929281.1"
                     /translation="MFKRFRRLRLNESLRAMVREHTLSINDFIYPLFVVNGKGIKKEI
                     SSMPDVFQMSLDEILKECKIISELGIKAIILFGVLENDKKDSCGSDAMDDEGLIARSI
                     REIKKEFPNLFVISDLCFCEYTDHGHCGIIDPKTKSVDNDATLEISAKQALVHARAGV
                     DMIAPSGMMDGIIETLRKALDEEGFENLPIMAYSTKFASSYYGPFRDVADSTPSYGDR
                     KSYQMDFANGKEALEESLEDEAQGADILMVKPALAYLDVVKEISLHSNLPLCVYNVSG
                     EYAMLKAAGHAGVINYEKVLYETMIAFKRAGAKLIITYHAKELAKMLKGEK"
     gene            3996..4907
                     /gene="argF"
                     /locus_tag="R8X70_001522"
     CDS             3996..4907
                     /gene="argF"
                     /locus_tag="R8X70_001522"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEF2929282.1"
                     /translation="MRHFLTLRDFSKYEILSLVEHASELKKNPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSSNDLQLSRGESIKDTARVIGAMVDFVMMRVNKHE
                     SLVEFAKYSKAPVINALSELYHPTQVLGDLLTIKECGKMKDDIAKVAFVGDSNNMCNS
                     WLIAAAILGFDFSVALPKNYEINSEILEFAKEKAKISGAKIFLTHDKFEAIKGKDVVI
                     TDTWVSMGEESEKEKKIKDFDGFIIDEEAMNAANQDAILLHCLPAYRGYEVSEESFEK
                     HSKVIFEEAKNRLYVVKALLCFLNKEK"
     gene            4957..5448
                     /locus_tag="R8X70_001523"
     CDS             4957..5448
                     /locus_tag="R8X70_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HEF2929283.1"
                     /translation="MKELEKYSNCLKRIDEFSQNLGMKKEDRAIFEMKQSENENEKCL
                     ILKNGSFDSPEPWFIMDENDQIHTLISLNSLKNILENLKQTQKENFELRLEKAIYQQI
                     PIDFSDVWIVAMDEIKRKAQEGVMEISIDLEKLLADIKKEHPNLFVDMQAMVERVKNN
                     ERL"
     gene            5435..6790
                     /gene="hemN"
                     /locus_tag="R8X70_001524"
     CDS             5435..6790
                     /gene="hemN"
                     /locus_tag="R8X70_001524"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEF2929284.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNTNFKYEEYIEILKKQNK
                     ALSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLKYLFQELDILSTIIDTKREVVQM
                     HFGGGTPTFFSAKQLESLILKIKSVFGNFTKDAEISCEIDPRFLNEEQADVLTKNGFN
                     RISFGVQDFDERVQKEIHRIQPFELTQNALKLVRDRGIKSVNMDLIYGLPFQSLQSFA
                     KTLEKAMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLTQNG
                     YKMIGMDHFAKEEDELFKALENGTLHRNFQGYTTKDGADLIGIGLTSIGEGQSHYAQN
                     FKDMPSYEAAISEGRLPFERGIKLSYDDELRKAVIMDLMANFRLDIKAIEKEFKINFK
                     EYFKEDLKALEEYKEFIDLSENFILVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            6801..8066
                     /locus_tag="R8X70_001525"
     CDS             6801..8066
                     /locus_tag="R8X70_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEF2929285.1"
                     /translation="MNFSQISDACVKCGKCIPVCTIHEVNRDETTSPRGFLDLLAAYK
                     EEKLELDKEAKKIFESCFLCTNCVEVCPSKLRVDNVIEEVRYDIAKKFGIAWYKKIIF
                     FFLRRRKILDLVAKLGYVFQSCAFKIQSQDQNVGMKAKFSMPFVKKGRLLTSFNKKSF
                     LNSNPDFIDNGGEKTVGFFVGCLANYFYIDTANAVLKIAKEVKINVDLMKEQVCCGAP
                     QFFTGDFKSVEILAKKNIEYFEKKLEKLDAIIIPEATCSAMLKIDLEHFFNMQNEPEW
                     AKRAQKISSRIYMASEYFYKFTNLKELLESKKKLNYSITYHDPCHARKMQGVFKEPRE
                     LLKANYHFVEMSNPNACCGFGGVSMQTDYYDRALSVGLKKASMIDESKACVVSAECSA
                     CRMQISNALEQNSSKAIFASPLELIAKAL"
     gene            8067..8807
                     /locus_tag="R8X70_001526"
     CDS             8067..8807
                     /locus_tag="R8X70_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929286.1"
                     /translation="MKITFQGKSDEYEIEKSYFYNRAFIVKDKIPNRDKIDFITDSVR
                     LLEFSDHSFEFDEILKCLYDENEENTIIVEEIFTTSQIKQDEEPRNPPLEIKIDEAPK
                     NNTRFTPFNTFSRIFNKDCFIFTSDNCEQKESVKVEKNQKLNIFELLKIEDLDASFVK
                     IEILDYDASNDSVNFDLDAFPSGASYKYGISQNTMYIILQGKMPSLLLLDFLKSFVYK
                     NKKELACEKTFVLMLNHKLVYELKAFFT"
     gene            complement(8810..9013)
                     /locus_tag="R8X70_001527"
     CDS             complement(8810..9013)
                     /locus_tag="R8X70_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929287.1"
                     /translation="MQYFFVFLIIIFLFIVFMLIMRYEKKLELLNQSIQNIKEEVNEL
                     KNTTQNNRSLIEKNRSDIESINK"
BASE COUNT         3180 a         1092 c         1686 g         3129 t
ORIGIN      
        1 tttaattgta attttataat tgcaaattaa aggagaaaac atatgataaa aaaaatagag
       61 cattataaaa atatactgat ttcaaatttt aaaggtttga tttttacagc ctctatagtg
      121 ttttttgcaa tgtatctttc aagtgttcaa agtattaaag atacaaccca tttagcagca
      181 gctgcttttg ctattattat aggagcattg ctttcacctt ggttttttaa ataccaacat
      241 catttacaag caggagtgca ctttagtgct aaaaaacttt taagattggg tattatctta
      301 tatggtttta atattactct aaccgaactt ttaagtgtgg gattaaaagg ctttatactt
      361 tctatgatag ttatattttt tatttttatt ttagctttga ttgtgggtgt aaaggttttt
      421 aaactagata aagaaacttc catgctagta ggtgctggaa gtgctatttg tggagcagca
      481 gctgttttag ccttagaatc aagcttaaaa agtgatccct ttaaaggaat tctagccgtt
      541 ggtacagtgg tgatttttgg gcttgttttt atgtttttat atcccatagt tttttcttta
      601 gatctttttc cttattttaa tcaacatgct atgggtatat ttatgggtgc aactttacat
      661 gaggtagcca atgttgcagg agctgctgaa atggcgaaag atatggcaaa ttttgatcaa
      721 agtgcttcaa atattgccat tattataaag atgatgagag tgattttgct tgtgccattt
      781 ttattgatta taacttattt ttttgctaaa aatcagcatt caagtaagga aaaaacagaa
      841 aaaaatataa gtattcctta ttttgcattt atttttttag gagtgattgt tataaatact
      901 tatttggcaa gtagggaaaa ttttcttgga atttctacaa gtgatattat atcttttgga
      961 aaattacttt gcactctttg tattgttttt gctatggctg ctttaggact tcaaatcgac
     1021 tttaaaaaat tcttaaaaag tggctcaaga gtttttggtt tagcttttgt tttgggattg
     1081 gttttggttt ttggaggata ttttctgacc ctattttttc gaggtatact ttggtaataa
     1141 aaattactat ttagaaaaaa ttattttttt ataaaaatat gctataattc tcacgcaaat
     1201 caaaatttta ttaaaaaagg ataaaaaaat gaaaaaaatg ttttatagca tcgcagcctc
     1261 tttgatactt gcaacaagtt cgagtgctgt ttctttcaat caagatagct tgaaagttag
     1321 ttttgaagga tataagaccg aagatatggt aggagtgggt ggagaattta aagatgttaa
     1381 atataaattt tctaaaaata caaaggattt ggcaagttat cttaagggtg ctaaagctac
     1441 cataaagcca agtaatgctt ttatgggtga aggcaatgat attataacga ataatatcac
     1501 aaaagtattt ttccctgctt tattggggga tacggatatt aaagttgttt ttcaagatgt
     1561 gattgcgggt gaaaataaag gcgttatttc agcaaaaatt actatggata aaaaaagtac
     1621 tattgtgcct ttaacttata ctatcaaaga taataaattt gaagctaaag gacaacttga
     1681 tttgcatact tttaaaaata gctctcaagc tctaaaagct ttgagtgatg ttgcaccagg
     1741 acatggcgga atttcatggc ctttagtaga tatcgttttt agcgctgatg tagtacaata
     1801 attacaaagt ggtattcata ccactttgag tattttttaa aacgcaatac cttcttaagc
     1861 cattttcaaa aatatcataa tctttcaacc cttctacttc atcaaaaatt tcacttcctt
     1921 tccaaagtat aaaaattgtt ttttgatcac ttatatttaa acaaagtttt attaagggtt
     1981 ttacatccat aagagctctt gaagtgataa tatcggcttt aaatgagctt ttataatttt
     2041 caactttttc tttgtatacg gttaaatttg ttaagttaca ttctattttg atacttctta
     2101 aaaatgcagc tttttttgga ttgggttcaa aaagatgaaa attgcttggt aaaataaagg
     2161 ctaaaaaaat agcaggaaag ccagcaccgc ttaccgatat cgactatatt ttttgccttt
     2221 gaaaaatcaa aatatttaag aatttcaatg ctatctaaaa tattttcatc tatatttttt
     2281 aattgagtga gattatgaat gcggttaaat ttatttagaa tttctttata gattttaagc
     2341 ttagccctaa aatcttcttc attaaaatca gataaaatta aatttaaaaa atccaaattc
     2401 aaagtaaatg ccccatttga ttttgtttta cctctaaata atttgcattg aagcggttag
     2461 gatttataag tataggaacg cgcgccatga ttttatcttg tatagagtga attttttgtg
     2521 gattgttagt aagtaaatta accttagaaa ttttataatg ttttagtata aattctacta
     2581 tttcataagt tctctcatca gccttaaagc ctagttggtg attagctttt atggtatcaa
     2641 aacccttatc ttgcaaagca taagcattga ctttattaaa aagtccaatt ccacgtcctt
     2701 cttgccttag gtaaatcacc attccaccat gtttttctat atattttaat gaaaattcaa
     2761 gttgttctcc gcaatcacat tttaagcttc ctaaggcatc ccctgttaaa cattctgaat
     2821 gaattcttaa atttaggata tcttgtggag tgtttttaaa tatacataaa tgttcttttt
     2881 ctccttcttt gaagctttga atttgaaaac taccccattt gctaggtaga tttgcaattt
     2941 ctgaaatttt tatatccatt tgctactctt tataatcaaa attatgataa cattgtagca
     3001 aaaaaaggac aaaaaatgtt taaaagattc cgcagactta gacttaatga gagtttaagg
     3061 gctatggtaa gagaacacac tcttagtatt aatgatttta tttatcctct ttttgttgta
     3121 aatggtaaag gaattaaaaa agaaatttca tctatgcctg atgtatttca aatgagttta
     3181 gatgaaattt taaaagaatg taaaatcata agcgagctgg gtataaaagc gattattctt
     3241 tttggtgttc ttgaaaatga taaaaaagat agctgcggaa gtgatgcgat ggacgatgag
     3301 ggacttattg caagaagtat aagagagata aaaaaagaat ttccaaatct ttttgttatc
     3361 agcgatcttt gcttttgtga atatactgat catgggcatt gtgggataat tgatcctaaa
     3421 accaaaagtg tagataatga cgcaacttta gaaatttcag ccaagcaagc cttagtccat
     3481 gcaagagcgg gggttgatat gatagcacct agcgggatga tggatggtat tatagaaact
     3541 ttacgcaaag ccttagatga ggaaggtttt gaaaatttgc ctataatggc atattctact
     3601 aaatttgctt caagttatta tgggccgttt cgtgatgtag cggattcaac gccaagttat
     3661 ggagatagaa aaagctatca aatggatttt gcaaatggaa aagaagcctt agaagaaagc
     3721 ttggaagatg aagcacaagg agcggatatt ttaatggtaa aacccgcttt agcttatctt
     3781 gatgtagtga aagaaatttc acttcattct aatttgcctt tgtgtgttta taatgtaagt
     3841 ggtgagtatg ccatgctaaa agcagcgggt catgcaggag tgattaatta tgaaaaagtt
     3901 ttatatgaga caatgatagc ttttaaaaga gcgggtgcaa agctaattat cacttatcac
     3961 gctaaagaat tagctaaaat gttaaaagga gaaaaatgag acatttttta acactaagag
     4021 acttttctaa atatgaaatt ttaagtcttg tagagcatgc aagcgagctt aaaaaaaatc
     4081 ccaaaaagct tttgcaagat aaaactttag caatgatttt tgaaaaaaac tccacaagaa
     4141 ctagaatggc ttttgagctt gctatcacag agcttggtgg aaaggcttta tttttaagca
     4201 gtaatgattt gcaattaagc cgaggtgagt ctataaaaga cacagctaga gttattgggg
     4261 cgatggttga ttttgtaatg atgagggtaa acaagcatga aagtttagta gaatttgcaa
     4321 aatattctaa agcaccagtt atcaatgctc taagcgagct ttatcatcca acgcaagttt
     4381 taggggattt actcactata aaagaatgtg gcaaaatgaa agatgatata gctaaggtag
     4441 cctttgtggg cgatagcaat aatatgtgta attcttggct tattgcagct gcgattttgg
     4501 gatttgattt tagtgttgca ttgccaaaaa attatgaaat caatagtgaa attttagaat
     4561 ttgccaaaga aaaagcaaaa atttcgggag caaaaatctt tttgactcat gataaatttg
     4621 aggccataaa aggtaaagat gtagtcatta ccgatacttg ggtttctatg ggtgaagaga
     4681 gtgaaaaaga aaagaaaatt aaagattttg acggctttat tattgatgaa gaggctatga
     4741 atgcggcaaa tcaagatgcg attttattgc actgcttacc tgcttatagg ggttatgaag
     4801 taagcgaaga gagctttgaa aagcattcaa aagtgatttt tgaagaagca aaaaatcgcc
     4861 tttatgtggt aaaagccttg ctttgctttt taaataagga aaaataagat tttatataat
     4921 ttcataagtt ggagaagata ggataaggag tttttagtga aagaacttga aaaatatagc
     4981 aattgcttaa aacgcattga tgaatttagc caaaatttag gcatgaaaaa agaggataga
     5041 gctatatttg aaatgaagca aagtgagaat gaaaacgaaa aatgcttgat acttaaaaat
     5101 ggtagttttg attctcctga accttggttt ataatggatg aaaatgatca aattcataca
     5161 cttatttctt taaatagtct taaaaatatt ttagaaaatt taaaacaaac tcaaaaagag
     5221 aattttgaac ttcgccttga aaaagcgatt tatcagcaaa ttcctattga ttttagtgat
     5281 gtgtggatag tggcaatgga tgagataaaa cgcaaggcgc aagagggtgt tatggagatc
     5341 agtattgatc ttgaaaaatt gcttgcagat attaaaaaag aacatccaaa tttatttgta
     5401 gatatgcaag ctatggtaga aagggtaaaa aataatgaga gattataagg cttttgtgaa
     5461 atattctaag gcaggaccgc gttatacttc ttatcctact gcagtggaat ttaacacaaa
     5521 tttcaaatat gaagaatata tagaaatttt aaaaaagcaa aacaaagctt tatcgcttta
     5581 ttttcatttg cctttttgca gaagtgcttg ttatttctgt ggctgtaatg ttatttatac
     5641 cgccaaagaa gaaagtaagg agagatattt aaaatatctt tttcaagaac ttgatatttt
     5701 aagcactatt atagatacta aaagagaagt ggtgcaaatg cactttggtg gtgggacgcc
     5761 tacttttttt agtgctaaac agctagaaag tttaatttta aaaattaaat ctgtttttgg
     5821 aaattttacc aaagatgctg aaattagctg tgaaattgat ccgcgttttt taaatgaaga
     5881 gcaagctgat gttttaacca aaaatggttt taatcgcatc agttttggcg tgcaagattt
     5941 tgatgaaaga gtgcaaaaag aaattcatag aattcaaccc tttgagctaa cgcaaaatgc
     6001 tttaaaattg gtaagagata gggggataaa atctgtcaat atggatttga tttatggttt
     6061 gccttttcaa agtttgcaaa gctttgctaa aaccttggaa aaagctatgc ttttaaatcc
     6121 ggatcgtttg gctattttta attacgctca tgtaccttgg cttaagaaaa atatgagaaa
     6181 atttgatgaa aatactttgc caagccctga tgttaagctt gaaattttgg aattttgtga
     6241 gaaatttttg actcaaaatg gttataaaat gataggtatg gatcattttg ccaaagaaga
     6301 agacgagctt tttaaagctt tggaaaatgg gactttacat aggaatttcc aaggctatac
     6361 tactaaggac ggcgcagatt tgatcggtat aggacttact agtataggag aaggacaaag
     6421 tcattatgca caaaatttta aagatatgcc aagctatgaa gctgcgatta gcgagggaag
     6481 attgcctttt gaaagaggga ttaagctaag ctatgatgat gagcttagaa aagctgtgat
     6541 tatggatttg atggcaaatt ttagactaga tattaaagct atagagaaag aatttaaaat
     6601 caattttaaa gagtatttta aagaagattt aaaagctttg gaggaatata aagaatttat
     6661 tgatttgagt gaaaatttta ttttagtaaa tgaaacaggc gttttgttga tacgaaatat
     6721 agctatgtgt tttgatgctt atatgaaaaa tataagtgaa gataaaaaag tcttttctaa
     6781 aacggtttga tgggatggtg atgaatttta gtcaaataag tgatgcttgc gttaaatgtg
     6841 gaaaatgtat tccggtttgt actattcatg aagtaaatcg cgatgaaact acaagcccta
     6901 ggggtttttt agatctttta gcagcttata aggaagaaaa attagagcta gataaagagg
     6961 ctaaaaagat ttttgaatcc tgttttttgt gtacaaattg cgtcgaggtt tgtccgagta
     7021 aattaagagt agataatgtc atcgaagaag tgcgctatga tatagctaaa aaatttggta
     7081 tagcatggta taaaaaaatt atcttttttt tcttaagaag gcgtaaaatt ttagatttgg
     7141 tcgcgaaatt aggctatgtg tttcaaagct gtgcttttaa aattcaaagt caggatcaaa
     7201 atgtaggtat gaaggctaaa ttttccatgc cttttgttaa aaaaggaaga ttgcttacga
     7261 gttttaataa aaaaagtttt ttaaattcaa accctgattt tatcgacaat ggaggagaaa
     7321 aaactgtagg tttttttgtg ggttgtttgg caaattattt ttacatagac acagctaatg
     7381 ctgtacttaa aatcgccaaa gaagtaaaaa tcaatgtgga tttaatgaaa gagcaagttt
     7441 gttgtggtgc accgcaattt tttacaggtg attttaaaag tgttgaaatt ttggctaaga
     7501 aaaatataga atattttgaa aaaaaattag aaaagcttga tgctattatc attcctgagg
     7561 caacttgctc ggcaatgttg aaaatagatt tagaacattt ttttaatatg caaaatgagc
     7621 cagagtgggc caaaagagct caaaagattt cctctcgcat ctatatggct agtgagtatt
     7681 tttataaatt tacaaattta aaagagcttt tagaaagtaa gaaaaagctt aattatagca
     7741 ttacttatca tgatccttgt catgcgagaa agatgcaagg ggtttttaaa gagcctagag
     7801 agcttttaaa agcaaattat catttcgttg aaatgagtaa tcctaatgca tgctgtggtt
     7861 ttggtggggt aagtatgcaa acggattatt atgatagggc tttgagcgta ggacttaaaa
     7921 aagcaagtat gattgatgaa agcaaagctt gtgtagttag tgccgaatgt tcggcatgta
     7981 gaatgcaaat ttcaaatgct ttggagcaaa attctagtaa agcaattttt gcaagtcctt
     8041 tggaacttat agcgaaagcc ttatagatga aaataacttt tcaaggtaaa agtgatgaat
     8101 atgagataga aaaatcatat ttttacaata gggcatttat agttaaggat aaaattccca
     8161 atagggataa gatcgacttt ataactgata gtgtaaggct tttggaattt agtgatcata
     8221 gctttgaatt tgatgaaatt ttaaaatgct tgtatgatga aaatgaagaa aataccatca
     8281 tagtagagga aatttttaca acaagtcaaa taaaacaaga tgaagagcca cgcaatccac
     8341 ctttagaaat aaagattgat gaagctccta aaaataatac aagatttact ccttttaata
     8401 ctttttcaag aatctttaac aaggattgct ttatttttac atccgataat tgtgagcaaa
     8461 aagaaagtgt gaaggtagaa aaaaatcaaa aattgaatat ttttgaatta ttgaaaattg
     8521 aagatttaga tgctagtttt gtaaagattg aaattttaga ttatgatgct agtaatgaca
     8581 gtgtgaattt tgaccttgat gcctttccta gtggagcaag ttataagtat ggaatttctc
     8641 aaaacaccat gtatataatt ttacaaggaa aaatgccaag ccttttactt cttgattttt
     8701 taaaaagttt tgtttataaa aacaaaaaag agctagcttg tgagaaaaca tttgttttaa
     8761 tgttaaatca caagttagtt tatgagctta aggctttttt tacttgaaat tatttgttga
     8821 tactttcaat atcagagcga tttttttcaa tcaaagagcg attgttttga gtagtgtttt
     8881 taagttcatt cacttcttct tttatatttt gtatgctttg atttaaaagc tcaagttttt
     8941 tctcatagcg catgatgagc ataaatacaa taaataaaaa tataataatt aaaaatacaa
     9001 aaaaatactg cacttgttct cctttattct cacctataat actataaata attttcttaa
     9061 aaagagatga ttttaggtat taatttt
//
LOCUS       DAQUWA010000070         8534 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.070, whole genome shotgun sequence.
ACCESSION   DAQUWA010000070 DAQUWA010000000
VERSION     DAQUWA010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8534
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.070"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            118..1578
                     /locus_tag="R8X70_001528"
     CDS             118..1578
                     /locus_tag="R8X70_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929288.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGML
                     VEFRTLSSDKKSENGAPVPVSKTITGIKPSKFQEFKEGDFITEHDFWKTDSDDELEDL
                     QNSRRSAYITELYRSIDFDSIEKIPLSFTIPQAIQKYFAHEILSVEALQANLQDEKDI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMIADKKPNIT
                     KIFNETFLSLQCHYQALIATIDTRKNRLASLEAQMKALQSEIQLKSNAANADPEKLKA
                     RQEKLAKLQKEAEYYRTTLKRLGAIQEDFYKKNYNIFENAFKLSREKLFKKIITGLNL
                     CATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKAALNPFDQKL
                     LVYIQKITKEQRKKFLVVTSDLDLLCKLKIETFAQNPYFIVKYAPKKVNYQSLMRDNS
                     FDIVFIDEKHIWESVADIILEGKHFDKIGKTKFKLI"
     gene            1819..3069
                     /gene="purD"
                     /locus_tag="R8X70_001529"
     CDS             1819..3069
                     /gene="purD"
                     /locus_tag="R8X70_001529"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEF2929289.1"
                     /translation="MKIMILGSGAREYSIALALKRVDENLEFYFAPGNGATESLGTNL
                     NFKDPVVLATYAKEKEFDLCIVGSESFLAEGVVDIFKQHNIPIFGPTKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFILSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEEASKMLSGESFGEAGKLIVVEEFLDGFELSIFAVCDGNDFVLLPAAQDHKKLLDGD
                     KGPNTGGMGAYAPSSLANESLLRKIQKDIIIPTLAGMKKEGSEFCGVLFIGIMVVGNK
                     PYVLEFNVRFGDPECEVLMPLIENPLELILATTQKRLRHTKIKIKKDYAVGVVCTSEN
                     YPYKSSPKSEISITNIPENTHISYAGVSLEDGKLMADGGRVLVCVGTGSSIEEAQKKA
                     YELCENVHFKGKQFRKDIAHQVIQ"
     gene            3066..3518
                     /locus_tag="R8X70_001530"
     CDS             3066..3518
                     /locus_tag="R8X70_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEF2929290.1"
                     /translation="MKEDLLTRLERENLTIASFNKRILAYFIDNLVLSLIVFVIFYDK
                     LLNAKDLFDTAQILGDFYLGFLLLHITYQTIFTYLYGASLGKMVCKIIILDEDLLDKP
                     NLNQSCIRSIVRQISDMAFMLGFAWALSNDLRKTWEDYLARTIVVNVA"
     gene            3508..5556
                     /locus_tag="R8X70_001531"
     CDS             3508..5556
                     /locus_tag="R8X70_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEF2929291.1"
                     /translation="MWRKILFLSASLTLLNATQVDIYALDAKKQGDILTANDDVIIFS
                     DFYFITANKAIYNEKTGDLELFGDVNILRGQNERSHSNYAKINLNSNEANFNNFFFSN
                     NNLEVWFQSKTSYLDENVFKSEISAVSSCNVEDPDWEIRFSKGWLNRENNFVHLYNAK
                     LYVKDFPIFYLPYFGFSADTHRQSGLLIPKIVLKNSEGLYYEQPIYIAPYENWDLELN
                     PQIRTDRGFGLYSTLRFIDSPYSIGEVNLGAFRENSSYYHDENLKNQSHYGAELKYAR
                     NDLIKTLLGDNFQEGLWIDATYLNDIDYLNLGSRDYRDLNSLVTSKINYFLADENNYY
                     GAYAKYYIDTSALNNDNTLQEYPSFQYHRFLNNFFDERLRYSFDASFHNFYRPVGPYA
                     NQLNLNLPISYHNAFFDDFLHFTFTERFYASFLNYSHYPQKDHEHYFRNTHDFNLYTD
                     LSKAYDNFFHTLNFGLKYVLPGAKSGSISEDYLEEIDKEEEHLGFYTTQYFYNNEGQK
                     KIKHRINIDYLNKQGEFDEISNLLSYYYNNNISFNSEIIYSDLQNRFTNIISQMEINP
                     NPKFNWSFSHAYQNDEYGKYSFIGTRANYLANANYHLFGGIWFDTQRAHANMWELGYT
                     FQRKCWNYSLMYRERIDPQLTSAGITAKNQSGIYFIFNFYPLGGVKYDFSLAETESKI
                     "
     gene            5630..7789
                     /locus_tag="R8X70_001532"
     CDS             5630..7789
                     /locus_tag="R8X70_001532"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEF2929292.1"
                     /translation="MQYSIEINGNLEVFDIEKVAKQAAGAVLMRQGKSVVLAAVAREE
                     KPVEEEFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     AYPTQIVVMVLSADPQVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGRIEEKFVLNP
                     NNEELKNSTLDLYVAGVKDELLMIEMRALPNQKEDEIFIEAPYADVLTQTTSQSMNEL
                     SEDEILEALSLAQKAILNGSNAYEEAFLKHKKSSDLNFKDEIENFELLAFIENNFHDQ
                     IVQAINQMAKSERASELNKIAEKILNFESATKWDEESILNALAKVKHKIVRSQILNTK
                     KRADGRNLNEVRPIAIETNILPNAHGSCLFTRGQTQALVVATLGSENDAQMVDVLTEK
                     NPINERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSIDENYPYVIRLVS
                     EILESNGSSSMATVCGGSLALRAAGVPSLKLVAGVAMGLIFEGDQYAILTDIMGLEDH
                     DGDMDFKVAGSKDGITALQMDIKLGGIDQKILKEALYQAKEGRIHILNIMEEALKEIV
                     VNEEVLPKLELFNVDPSKIVDIIGQAGKTIKEIIEKFGVSIDLDREKGEVKIAGNENE
                     QIKAAKDYIINITSSQKNNKKGFKEKDLSNFEIGEEFEGKVKKITNFGAFIELKNGID
                     GLLHNSKSKNLNLSENQILKVKVSEIKNGKISVDLYE"
     gene            7786..8268
                     /locus_tag="R8X70_001533"
     CDS             7786..8268
                     /locus_tag="R8X70_001533"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HEF2929293.1"
                     /translation="MSEFLTHPFKPFFDKDSKILILGSFPSVKSREDGFYYQHPRNRF
                     WPILETLFDTRLENITKQQAFLKEKNIAIWDVLQSCKIKNSDDKTISYAKANDLNLIL
                     SQAQIQSIFTTGKSAYRFFTKFHPHLKAIALPSSSPANLNFSFEQLLQSYKIIKNFIK
                     "
BASE COUNT         3105 a         1242 c         1455 g         2732 t
ORIGIN      
        1 aaaaaaatat aactaaaaag aattttaaaa tcaaacatgt aattttattc ttttgcttat
       61 aaaattttta taaaaataaa gctaaaatta tcttttaaaa actttcaagg atgaaatatg
      121 catggaaaaa tagctatata tatggattcc acagggcgtg gaactgtaac gaattcagca
      181 aatacttttt ttgactttaa tcgtcaaatt tggaatgata aaaaaagtat gccaagtgtt
      241 gggatgcttg ttgaatttcg cacgctctct agtgataaaa agtctgaaaa cggcgctcct
      301 gtgcctgtaa gcaaaactat cacagggata aaaccttcca aatttcaaga atttaaagag
      361 ggtgatttta tcactgaaca tgatttttgg aaaaccgata gtgatgatga gcttgaagat
      421 ttacaaaatt ctcgcagaag tgcgtatatt acagaacttt atagaagcat tgattttgat
      481 tctatagaaa aaattccctt atcttttact attcctcaag ccatacaaaa atattttgcc
      541 catgaaattt tatctgttga agccttgcaa gccaatttac aagatgaaaa agatattcct
      601 tgtattttgg actatctcat tcttaagaga tttttattta aagcttatga tactttaatt
      661 tttatggata atagtataga tcaaacccaa tttagcgccc taaaaagcat tatgatgcac
      721 ttagaaaatt cttacaaaca aatgatagca gataaaaaac ccaatatcac taaaatattt
      781 aatgaaactt tcttatcttt acaatgccat taccaagctt taatagccac tatagataca
      841 agaaaaaacc gccttgcttc acttgaagca caaatgaaag ctttacaatc tgaaattcaa
      901 cttaaaagca atgcggccaa tgcagatcct gaaaaactca aagcaagaca agaaaaatta
      961 gcaaaacttc aaaaagaagc ggagtattat agaacaaccc ttaaaagact gggtgctata
     1021 caagaggatt tttataagaa aaattataat atttttgaaa atgctttcaa gctttcacgc
     1081 gaaaaactct ttaaaaaaat aattacaggt cttaatttat gtgctacgat aatggatgtt
     1141 aaaatttggc acctgtcctt aaaatcatca ggggttaaaa attcatattt tacaatgagc
     1201 aatatagaaa attccttttg ttctctttca tttgcagagc attatctaag tcgcttaaac
     1261 aaagcagcgc ttaatccttt tgatcaaaaa cttttagttt atatccaaaa aattaccaaa
     1321 gaacaaagaa aaaaattttt agtcgtgact tcggatttgg atttgctttg taaattaaaa
     1381 atagaaacct ttgcgcaaaa tccttatttc atagtaaagt acgcccctaa aaaagtcaat
     1441 tatcagtctt taatgcgtga taatagtttt gatatagtgt ttatcgatga aaaacatata
     1501 tgggaaagtg tagcagatat tattttagaa ggaaaacatt ttgataaaat aggaaaaacc
     1561 aaatttaaac tgatttaaac atagaatttt aagctaaata aggctataat ttgcttgcct
     1621 aaacagttcg tgatatttaa agtgatccaa catattttta ttaactgtga ttgtgcgatt
     1681 taccgtgttc tgtggcgtcg tttgagtttc gaaagaagcg agaagttgca gcctttaaaa
     1741 atcgcctaac ggttttcttt gactttttgg ggtcaatctt tattaagcgg ctgtttgggt
     1801 tttatacaag gagaataaat gaaaataatg attttgggta gcggtgctcg tgaatattct
     1861 atcgctttag cgctaaagcg tgtggatgaa aatttagaat tttactttgc ccctggtaat
     1921 ggtgctaccg aaagtcttgg aaccaatctc aattttaaag atcctgtagt tttagccact
     1981 tatgcaaaag aaaaagaatt tgatctatgc atagtgggta gtgaaagttt tttagctgaa
     2041 ggcgttgtag atatttttaa acaacacaat attcctattt ttggacctac aaaagctgca
     2101 gctatgcttg aaacttctaa atctttcatg aaaagctttt taaaaaaata tcgtattaaa
     2161 acagcaaaat ttttaaacac aaatgatata gaaaaagcaa aaaactttat attaagctta
     2221 actcctccta tagtcgttaa agctgatggg ctttgtgctg gcaaaggagt aattatcgca
     2281 aaaactcacg aagaagccat agaagaggct tctaaaatgc taagtggaga aagctttgga
     2341 gaagcgggta aacttatcgt tgtggaagaa tttttagatg gctttgagct tagtattttt
     2401 gcggtatgtg atggcaatga ctttgtgctt ttacctgctg cacaagatca taaaaaactt
     2461 ttagatgggg ataaaggacc aaatacgggt ggtatgggag cttatgctcc gagttcttta
     2521 gctaatgaaa gcttgcttag aaaaatacaa aaagatatca ttatcccaac tcttgcaggt
     2581 atgaaaaaag aaggcagtga attttgcggg gtattgttta taggtattat ggttgtaggc
     2641 aataagcctt atgtcttgga atttaatgtg cgctttggtg atcctgaatg tgaagtttta
     2701 atgcctttga ttgaaaatcc tttagaactt attttagcca ctacacaaaa gcgtttaaga
     2761 cacaccaaga taaaaattaa aaaagattat gcagtgggcg tagtatgcac gagtgaaaac
     2821 tatccttaca aaagctctcc aaaaagtgaa atttctataa caaatattcc tgaaaataca
     2881 catatttctt atgctggagt aagtttagaa gatggtaaac ttatggcaga tggtgggcgt
     2941 gtattggttt gcgttggtac aggctcaagc atagaagagg cacagaaaaa agcttacgag
     3001 ctttgtgaaa atgttcattt taaaggcaag caatttagaa aagatatcgc tcatcaggtt
     3061 attcaatgaa agaagattta cttacgcgtc ttgagcgaga aaatcttacc attgctagtt
     3121 tcaataaaag gatattggca tattttatcg ataatcttgt actttcgctg attgtatttg
     3181 ttatttttta tgataaatta cttaatgcta aggatttatt tgatacagct caaattttgg
     3241 gcgattttta cttaggattt ttattgcttc atattactta ccaaacaatt tttacttatt
     3301 tatatggggc aagtttagga aaaatggtat gcaaaatcat tattttagat gaagacttat
     3361 tagacaaacc caatttaaac caaagctgca tacgctcaat cgttagacaa ataagcgata
     3421 tggcatttat gttgggcttt gcttgggctt taagcaatga tttacgcaaa acttgggaag
     3481 attatctagc aaggacaata gtagttaatg tggcgtaaaa ttttattttt aagcgctagt
     3541 cttactttac tcaatgccac tcaagttgat atctatgcac ttgatgctaa aaaacaaggg
     3601 gatatactca ctgcaaacga tgatgtgatt attttttcag atttttattt tatcactgcc
     3661 aataaggcta tttacaatga aaaaaccgga gatttagagc tttttggtga tgtgaatata
     3721 ttaagaggac aaaatgaacg ctctcattca aactatgcta aaatcaattt aaattcaaat
     3781 gaagctaatt ttaataattt tttcttttct aataataatt tagaagtatg gtttcaaagc
     3841 aagactagct atttagatga gaatgttttc aaaagcgaaa tttcagctgt ttcaagttgt
     3901 aatgtcgaag atcctgattg ggaaattcgc ttttctaaag gatggctcaa tagggaaaat
     3961 aattttgttc atttatataa tgcaaaatta tatgttaaag attttcctat attttattta
     4021 ccctattttg gttttagtgc agatacccac cgccaaagcg gacttttaat cccaaaaata
     4081 gtcttaaaaa acagcgaagg tttgtattat gaacagccta tttatatcgc accttatgaa
     4141 aattgggatc tagaattaaa tcctcaaatt agaaccgatc gtggttttgg gctttactca
     4201 accttaagat ttatcgactc tccttattct ataggagagg taaatttagg agcttttaga
     4261 gaaaattcat cctattatca tgatgaaaat ttaaaaaacc aaagtcatta cggcgcagaa
     4321 ttaaaatatg ctagaaatga tttaattaaa accctgttgg gcgataattt tcaagaaggc
     4381 ttatggatag atgctaccta tcttaatgat atagattatc ttaatcttgg cagcagggat
     4441 tatcgtgatt taaattcatt agttacttca aaaatcaatt attttctagc ggatgaaaat
     4501 aattattatg gagcttatgc aaagtattat atcgatactt ctgcattaaa taacgataat
     4561 accttacaag aatatccaag ctttcaatat catcgttttt tgaataattt ttttgatgaa
     4621 cgcttgcgtt attcttttga tgcatctttt cataattttt atcgccctgt aggcccttat
     4681 gcaaatcaat tgaatttaaa tttgcctatt tcttatcata atgctttttt tgatgacttc
     4741 ttgcatttta cttttaccga acgcttttat gcttcatttt taaactatag tcattatcct
     4801 caaaaagatc atgagcatta ttttagaaat acgcacgatt ttaatcttta tactgattta
     4861 tctaaagcat atgataattt ttttcatact cttaattttg ggttaaaata tgttcttcca
     4921 ggagccaaat caggaagtat ttcagaagat tatcttgaag aaattgacaa agaagaggaa
     4981 catcttggct tttatactac tcaatacttt tacaataatg aaggtcaaaa aaaaatcaaa
     5041 catagaatta atattgatta tttaaacaag caaggtgagt ttgatgagat aagcaattta
     5101 ttaagctatt attataataa caatatcagt tttaatagtg agattattta ctctgatctt
     5161 caaaatcgtt ttacaaatat catcagtcaa atggagatca atcctaaccc taaattcaat
     5221 tggagttttt cgcatgctta tcaaaacgat gagtatggaa aatatagttt tataggcacg
     5281 cgcgcaaatt accttgcaaa tgcaaattat catttgtttg gaggaatttg gtttgatacc
     5341 caaagagcgc atgctaatat gtgggagctt ggatatactt ttcaacgcaa atgttggaat
     5401 tattctttaa tgtatagaga aagaattgat ccgcaactta caagtgcggg aattactgct
     5461 aaaaatcaaa gcggtattta ttttattttt aacttctatc ctttaggtgg agttaaatac
     5521 gatttttctt tagcagaaac ggagagtaaa atttaaaatt aaggaatgag atttgctaaa
     5581 tatttttaaa agtttgacaa atttattata tggaaaaaaa ggacaaatga tgcaatacag
     5641 tatagaaatc aatggtaatt tagaagtatt cgatatagaa aaagtagcta aacaagctgc
     5701 aggtgctgtg cttatgcgac aaggaaaaag tgtcgtttta gccgcggttg caagagagga
     5761 aaagcctgtt gaagaagaat ttttgcctct aactgttcag tatatagaaa aagcctatgc
     5821 agcaggaaaa atcccaggcg gctatgttaa aagagaaacc aaaccaagcg atgcagaaac
     5881 tttaactgca cgcattatag acagaagttt gcgtccgctt tttccaaaag gatatgccta
     5941 cccgacacaa attgtcgtaa tggttctttc tgctgatcct caagtagatc ttcaagttat
     6001 gagtctaaat gcagcaagcg tagcacttta tcttagtgat attcctatga aagctcctgt
     6061 ttgtggagtt cgcataggtc gcatagaaga aaaatttgtc ctaaatccaa acaatgaaga
     6121 acttaaaaat agcacccttg atctttatgt agcaggggtt aaagatgagc ttttaatgat
     6181 agaaatgcgt gctttaccta atcaaaaaga agatgaaatc tttatcgaag ctccttatgc
     6241 agatgtttta acccaaacaa cttcacaaag catgaatgaa cttagcgaag atgaaatttt
     6301 agaagcgcta agtctagccc aaaaagctat attaaatggc tctaatgctt atgaagaagc
     6361 ttttttgaaa cataaaaaat caagcgattt aaatttcaaa gatgaaatag aaaatttcga
     6421 acttctcgcc tttatagaaa ataattttca cgatcaaatc gtacaggcta tcaatcaaat
     6481 ggcaaaaagt gaaagagcga gtgagttaaa taaaattgct gaaaaaatat taaattttga
     6541 aagcgcgaca aaatgggatg aagaaagtat tttaaatgcc ctagcaaaag tcaaacataa
     6601 aatcgttcgt agccaaattt taaatacaaa aaaaagagca gatggtagaa atttaaatga
     6661 agtgcgtcct attgccatag aaacaaatat tttacctaat gcacatggct cttgcctttt
     6721 tacacgcgga caaactcaag ctttggttgt ggcgacttta ggtagtgaaa atgatgcgca
     6781 aatggttgat gtgttaaccg aaaaaaatcc tatcaatgaa cgctttatgg ttaattataa
     6841 ttttccaggt ttttcagtag gcgaggcaag ccctatcaaa gcacctggaa gaagagagtt
     6901 aggacatgga aacttagcca aaagagccct ttatccaagc atagatgaaa attatcctta
     6961 tgttatccgt ttggtaagtg aaattttaga aagcaatggc tctagttcta tggcaacggt
     7021 ttgtggaggg tctttagcct taagagcagc gggagtacct agcttaaaac ttgtagcagg
     7081 agtagctatg gggcttattt ttgaaggcga tcaatatgct attttaactg atatcatggg
     7141 cttagaagat catgatgggg atatggattt taaagtagca ggtagcaaag acggtatcac
     7201 agccttacaa atggatatca aattgggcgg tattgatcaa aaaatactca aagaagcctt
     7261 gtatcaagct aaagaaggta gaattcatat cttaaatatc atggaagaag cacttaagga
     7321 aattgttgtt aatgaagagg tattgccaaa actcgagctt ttcaatgttg atccttcaaa
     7381 aatagtcgat atcataggtc aagctggaaa aactatcaaa gaaattattg aaaaatttgg
     7441 tgtttctata gacttagatc gtgaaaaggg tgaagtaaaa attgcgggca atgaaaacga
     7501 acaaattaaa gccgcaaaag attatattat caatatcaca agttctcaaa aaaataataa
     7561 aaaaggcttt aaagaaaaag atctatcaaa ctttgaaatc ggcgaagaat ttgaaggaaa
     7621 agtcaaaaaa atcacgaatt ttggagcctt tatagaactt aaaaatggaa ttgatggctt
     7681 gcttcataat tctaaaagta aaaatctcaa tttaagtgaa aatcaaattt taaaagtaaa
     7741 agtaagtgag attaaaaatg gcaaaatctc tgtggattta tacgagtgag tgagttttta
     7801 actcatcctt ttaaaccctt ttttgataag gattctaaaa ttttaatttt aggatctttt
     7861 ccctcggtaa aatcaagaga agatggattt tactaccagc acccaagaaa tcgtttttgg
     7921 cctatactag aaacactttt tgatacaaga ttagaaaata taacaaaaca acaagcgttt
     7981 ttaaaagaaa aaaatatcgc catttgggat gtgcttcaaa gctgtaagat taaaaattca
     8041 gatgataaaa ccataagtta cgcaaaggct aatgatttaa atttaatcct ttctcaagca
     8101 caaatccaat ctatttttac cacagggaaa agtgcttatc gattttttac taaatttcat
     8161 cctcatttaa aagccatagc cctaccctca agctctcctg caaatttaaa tttttctttt
     8221 gaacaacttt tgcaaagcta taaaataatc aaaaatttta taaaataatt tttgattacg
     8281 tatgtaaaaa atacccaaaa gcatatataa aaataaaatt atttcacaaa aaagtaatac
     8341 atataaaaac acaccttcgc atataaaaaa cataaatcca aaaaaggcaa ataaaaataa
     8401 agctaaagtt cctaaaaaca atttagaaag atctttagca caaaaaatca tataatttat
     8461 aaaaaaatca aacattttaa gatttatgac atccttttag caaattttaa tcagcttttg
     8521 tgatagtgag tcat
//
LOCUS       DAQUWA010000071         8487 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.071, whole genome shotgun sequence.
ACCESSION   DAQUWA010000071 DAQUWA010000000
VERSION     DAQUWA010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8487
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.071"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..217
                     /locus_tag="R8X70_001534"
     CDS             <1..217
                     /locus_tag="R8X70_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929294.1"
                     /translation="NTFDFWQENFKNIKGFRTALHNSLFCDFSYDKLLDLKNLKNFKY
                     CLLLEDYEAFEREFKNKENQSPSLFLN"
     gene            complement(190..666)
                     /locus_tag="R8X70_001535"
     CDS             complement(190..666)
                     /locus_tag="R8X70_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEF2929295.1"
                     /translation="MFKVYYKIPFCYLSLHSNGDFLTKIDFCDRLDIENTCPLLEFAK
                     EELRLYFAKKLQKFQTPLWIQGSDFEQKVYKELINIPYAKLATYKEIAININHPKAFR
                     AVGNANSKNLIPIFIPCHRVIASNGLGGYNGGLAIKRFLLECEGVDLSQFKNKLGD"
     gene            721..3267
                     /locus_tag="R8X70_001536"
     CDS             721..3267
                     /locus_tag="R8X70_001536"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEF2929296.1"
                     /translation="MSFMQDYNKLVEERAALGIPPLPLNAEQTKELCELLKTQNDEKL
                     VSLLQNRVNPGVDDAALIKCEFLDGILKNKFQAPAIDKKLALKMLETMLGGYNVKVLI
                     DALKDESIASDAAEVLKNIIFVHDNFHTVAELSKSNNHAKAVLESWANADWFNKKEKL
                     PQVIQCVVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQTGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIDGVPNKHSGGIVMGSTIAPIFFNTAQD
                     SGALPIICDVSNLEMGDEFEIHPYEGKIVKNGSVVAEFKLSPNTILDEVRAGGRIPLI
                     IGRGLCAKAREFLGMENENIFTKPEQPEASSGGYTLAQKMLGRACGVEGVRPGMYIEP
                     RTLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNVPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEAGYEDK
                     ATLARRADKMREWLKNPTLLRADKDAKYAYIIDINLNDIKEPILACPNDPDDVATLSE
                     ILADDKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLTK
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPSKEEYLQIVSDKLSDAHKANIYKYLNFNEIDNFKLDN"
     gene            3326..4567
                     /locus_tag="R8X70_001537"
     CDS             3326..4567
                     /locus_tag="R8X70_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEF2929297.1"
                     /translation="MRLLFILFCCFLGLKAENLITCDYIKNNKAQVFQDSPKQDYLDI
                     ASTCDFSLKNQAFTKRLYQLANEIRGGNAACSGIEYFPKLQEFDFLLLKISIDPIEYQ
                     KGLDAPENLEKKYTLLRSYFRYWAYQSIGNFRLYQEFWQEYNNAIEPLEQYFENNFKF
                     DKGSNIYYTTNALNEFLNWAVGETKIYKDISPLAKVLSNKKHSITYIQDFIYTNNLNR
                     DELTIGLQAALLNQRNKDILNLLIRLGARIDEGYENALFYALENYDNTKFLLELGLNV
                     NSANTFGKTPLFYAIEFKRKDIVSLLLEYGTDVNKKYINDNEKLALSANIGGNTPYFI
                     TFCALEHTSKNVLMHAAAYGDVEILKMLVAKGADINEIDDLGFNALDFALAANQKDNA
                     NYLQSLGLKPNENLIYGGSLE"
     gene            4564..5313
                     /locus_tag="R8X70_001538"
     CDS             4564..5313
                     /locus_tag="R8X70_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEF2929298.1"
                     /translation="MKTAFITGASSGFGHACVEAFIQEGYKVIALARRKDRLDELKAK
                     YKDQIHILCLDVRKQEEIFKAVENLPNDFKEIDVLFNNAGLALGIDEFDKLSIEDIDT
                     MVDTNIKGLLYVAKAIIPILRKQKSAYIFNLGSVAARNPYFGGNVYCGTKAFVGQFSR
                     ALRNDLRGENIKVTNIAPGLCKTEFSEVRFKGDKAKADAVYEGTQYISAQDIAKVVMS
                     IINLPSHINVNEIELMPVTQTWNGFYIEQNQ"
     gene            5310..7040
                     /locus_tag="R8X70_001539"
     CDS             5310..7040
                     /locus_tag="R8X70_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEF2929299.1"
                     /translation="MRFLVFFLPPLLAFANTHQATANANLFGVFTLIPPLVAITLAFI
                     TKDVILSLFAGVLSGTFLLSLTSNIFQADSLSFIHFYNTAIDSFSKIISYILESTSDP
                     VNAGIILQILCIGGLVALITKMGGAKAVAIKFAKRAKSAVSAQVNTWFLGLLIFFDDY
                     ANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKNAYED
                     IGISNISAFGVFVETIPYRFYNIFMLFFVLMTALMGREFGPMLKAEIRARTTGQIVPL
                     SKSSTLDTAELEDQFLAPKEDIKIRALDATIPILTLIVLAILGFYFNGLSTLEGEELL
                     KANANPLSFETLRLAFGSANSSVVLFQAALFAAIVAIFIGVYRKIFNFKEAVETWIYG
                     WKTMIFTIVLLLFAWSLSSIVKELGTPEFISSLLADKLPEFILPATIFAFASLISFAI
                     GTSYGTMGILMPLAVPLAYKVAQINAMDMDAMYHYMVINISCVLTGAIFGNHCSPISD
                     NVILSSMSAKCDHMEHVRTQIPYALFICVISLFAGYIPVSLGLSVWLVLPLNLILIAF
                     LLRIIGKKVS"
     gene            7037..8125
                     /gene="trmA"
                     /locus_tag="R8X70_001540"
     CDS             7037..8125
                     /gene="trmA"
                     /locus_tag="R8X70_001540"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEF2929300.1"
                     /translation="MSLQEFGNFLKLEEKASFIKEFFKDFYQGNFELFSSKDKHYRTR
                     AELSFYHDKDEIYYAMFENKKKIIIESLEFADEKITAFMPKLLKQIRNNTNLKEKLFG
                     VEFLATKNELSTTLLYHKNIELIYNDLNNLSLELDANLIARSKGKKLVFKKENLRQEL
                     DIQGRKIFYKFNNDCFIQPNTSINEKMITWVCENLKTQERKDLLELYCGYGNFTLALA
                     IFFNNVLATEISKSNINFALLNCKINNISNIHFTRLSSEELSQALKKEREFFRLKDID
                     LDNFNFSHILVDPPRAGLDKSVIDLIKNYENIIYISCNPISLKENLKELALTHKVEKF
                     ALFDQFVNTPHLECGVLLKSLHSKQSSI"
     gene            complement(8137..8391)
                     /locus_tag="R8X70_001541"
     CDS             complement(8137..8391)
                     /locus_tag="R8X70_001541"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929301.1"
                     /translation="MPFIVLLLFLSGGAMISFHLNPLNLIFLIKLILAFSILSLVVFS
                     LFFHFVLKRKNPLTRFIHPFVFMLCIFIVVLAKLMNYYFL"
BASE COUNT         2981 a         1281 c         1460 g         2765 t
ORIGIN      
        1 aaataccttt gatttttggc aagaaaattt taaaaatata aagggtttta gaaccgcttt
       61 gcataattca ttattctgcg atttttcata cgacaaactt ttagatctta aaaacttaaa
      121 aaattttaaa tactgcctgc ttttagaaga ttatgaagct tttgagcgtg aatttaaaaa
      181 taaagaaaat caatctccaa gcttattttt aaactgactt aaatcaaccc cctcacattc
      241 taacaaaaat ctttttatag caagaccgcc attatatcca cccaagccat tactagctat
      301 aaccctatga caaggaataa aaataggaat taaattttta gagtttgcat tacccactgc
      361 gcgaaaagct ttggggtggt tgatatttat agctatttct ttgtaagtag caagctttgc
      421 ataagggata tttatcaatt ctttatatac tttttgttca aaatcactcc cttgtatcca
      481 taaaggtgtt tgaaattttt gaagcttttt agcaaaataa agtctgagtt cttctttggc
      541 aaattcaagc aggggacaag tattttcaat atccaaacga tcgcaaaaat cgatttttgt
      601 taagaaatct ccattgctat gtagagataa gtaacaaaat ggtattttat aataaacttt
      661 aaacatattt tatcctttaa atagttaaaa ttatactaaa aaatatttaa ggagtaaaaa
      721 atgtctttta tgcaagatta caataagctt gttgaagaaa gagcagcttt gggtatccca
      781 ccccttcctt taaatgcaga acaaactaaa gaactttgtg aacttttaaa aacccaaaat
      841 gatgaaaaat tggtatcttt attgcaaaat cgtgtcaatc caggcgttga cgatgcagcc
      901 ttgataaaat gtgaatttct agatggaatt ttaaaaaata aatttcaagc tccagccata
      961 gataaaaaac tcgctttaaa aatgcttgaa acaatgctag gtggttataa tgtaaaagtt
     1021 ttaatcgatg cattaaaaga tgaaagtata gctagcgatg cagcagaagt acttaaaaat
     1081 atcatctttg tacatgataa tttccatacc gtagcagaac ttagcaaaag caataatcat
     1141 gctaaagctg ttttggaaag ttgggcaaat gcagattggt ttaataaaaa agaaaaatta
     1201 cctcaagtga ttcaatgtgt agtttttaaa gtagcaggag aaaccaatac agatgattta
     1261 agccctgctg gtgatgcttt tacaagaagc gatatccctt tacatgctaa tgctatgcta
     1321 aaagtaagac aaacaggttc tctagaaaaa atcaaagaac tcaaaaaaag tggtcgtgaa
     1381 gtcgtatatg tgggcgatgt cgtaggtaca ggttcaagta gaaaatctgc gattaactcc
     1441 atacaatggc atttaggaaa agaaattgat ggtgtgccaa acaaacacag tggtggtata
     1501 gtaatgggct caaccatagc tccgattttc tttaacacag ctcaagatag cggtgcttta
     1561 cctattattt gcgatgtgtc caatctagaa atgggagatg agtttgaaat tcacccttat
     1621 gaaggaaaga ttgtaaaaaa tggttctgtt gttgcagagt ttaaactcag cccaaatacc
     1681 atcttagatg aagttagagc aggaggaaga attccactta tcataggtcg tggactttgt
     1741 gctaaagcta gagaattctt aggaatggaa aatgaaaata tctttactaa gccagaacaa
     1801 cctgaagctt caagcggtgg atatacttta gctcaaaaaa tgctagggcg tgcctgtgga
     1861 gttgaaggtg tgcgtccagg tatgtatata gagcctcgca cacttactgt aggttctcaa
     1921 gatactacag gtcctatgac aagagatgag attaaagagc ttgcaagctt aggatttaat
     1981 gcggattttg taatgcaaag tttttgtcat actgctgctt atccaaaggt tagtgactca
     2041 aatttgcaca aaactttacc taatttcatg acaagtcgtg gtggagtaag cttaaaacca
     2101 ggcgatgggg taatccactc ttggcttaat cgttttgttt tacctgatac agtaggaaca
     2161 ggtggagatt ctcacactcg ttttcctata ggaatttcat ttcctgcagg aagtggactt
     2221 gtagcttttg ctgcagtaac tggctctatg cctttgaatg tacctgaaag tgttttggtg
     2281 cgttttagcg gagaattgca agctggagtt accttaagag atcttgtaaa tgctatacct
     2341 tattatgcaa tcaaacaagg acaacttact gttgaaaaga aaaataaaaa gaacattttt
     2401 gcaggaaaaa ttttagaaat agaaggcttg ccaaacttaa aagtagaaca agcttttgaa
     2461 ctcagtgatg caagtgctga aagatctgca gctgcttgta gtgtagattt aagcatagaa
     2521 agtgtaagcg aatatatcaa atcaaatatt tcacttatag aagcaatgat agaagcagga
     2581 tatgaagata aagccactct tgctagaaga gcggataaaa tgagagaatg gcttaaaaac
     2641 cctactcttt taagagcaga taaagatgca aaatatgcgt acattatcga tattaatctt
     2701 aacgatatca aggagccaat tctagcttgt ccaaatgacc ctgatgatgt ggcaacctta
     2761 agcgaaattt tagccgatga taagcgtcca aaaaatatcg atgaagtttt tgtaggctct
     2821 tgtatgacaa acataggaca ttatagagct ttgggagaaa ttttaaaaga taaaggcata
     2881 cttaaaacca gactttgggt agtgcctcca acaaaaatgg ataaagcaca actcaccaaa
     2941 gaaggttatt acagcatctt tggcgcagca ggcgctagaa tagaagttcc aggttgttcg
     3001 ctatgtatgg gaaatcaagc aagagtaaat gatggtgctg ttgtcttctc aacctctaca
     3061 agaaactttg acaatcgtat gggtatgggt gctaaagtat atctaggaag tgctgaactt
     3121 gcagcagttt gtgcgatttt aggtaaaatc ccaagcaaag aagaatattt gcaaatcgta
     3181 agcgataaat taagcgatgc gcacaaagca aatatttata aatatcttaa ttttaatgaa
     3241 attgataatt ttaaactaga taattaatcc aaatttaaag cagatttggg ttaaaattat
     3301 agattaaaat tttcaaagga taaaattgag attattattt attttatttt gttgtttttt
     3361 aggtttaaag gccgaaaatt taattacttg tgattatata aaaaataaca aagcccaagt
     3421 ttttcaagat agtccaaagc aagactatct tgatattgct tctacttgtg atttttcttt
     3481 aaaaaatcaa gcttttacca aaagacttta tcaactcgcc aatgaaattc gcggtggaaa
     3541 tgctgcttgt agtggtattg aatattttcc aaaactacaa gaatttgact ttttgctttt
     3601 aaaaatttct attgatccta tagaatatca aaaaggtcta gatgctcctg aaaatttaga
     3661 aaaaaaatac actcttttaa gatcttattt tagatattgg gcttatcaaa gtataggaaa
     3721 ttttagactt tatcaagaat tttggcaaga atacaataat gccatagaac ccttagaaca
     3781 atattttgaa aataatttca aattcgacaa gggtagcaat atttactata ccaccaatgc
     3841 tttaaatgaa tttttaaatt gggctgtagg agaaactaaa atttacaaag atataagtcc
     3901 tttagcaaaa gttttatcca ataaaaaaca ttcaataact tatatccaag attttattta
     3961 taccaataat ctcaaccgag atgaacttac catagggctt caagcagcct tgttaaacca
     4021 acgcaacaaa gatattttaa atcttttgat ccgtttgggt gctagaatcg atgagggtta
     4081 tgaaaatgct ttgttttatg ctttagaaaa ctacgataat accaaatttt tattagaact
     4141 aggtttaaat gtcaatagtg ccaatacttt tggcaagaca cctttatttt acgctataga
     4201 atttaagcgc aaagatattg tttcattgct tttagaatat ggtactgatg ttaataaaaa
     4261 atacattaac gataatgaaa aattagccct aagcgcaaat ataggcggaa acactcctta
     4321 ttttatcacc ttttgtgctt tggagcacac ttctaaaaat gttcttatgc atgcggccgc
     4381 ttatggagat gtagaaattt taaaaatgct tgttgcaaaa ggtgctgata ttaacgaaat
     4441 agatgattta ggttttaatg ctttagattt tgccctagca gccaatcaaa aagataatgc
     4501 taattatctg caaagtctgg gtttaaaacc caatgaaaat ttaatttacg gagggagttt
     4561 agaatgaaaa ctgcatttat cacaggagca agctctggtt ttgggcatgc ttgcgttgaa
     4621 gcttttatac aagaaggata caaagtcatt gctctagcaa gaagaaagga tcgtttagat
     4681 gaattaaaag ccaaatacaa agatcaaatt cacatacttt gtcttgatgt aagaaaacaa
     4741 gaagagatct ttaaagctgt tgaaaaccta cctaacgatt ttaaagaaat agatgtactt
     4801 tttaataatg ctggtttagc tcttggcata gatgaatttg ataaattaag tatagaagat
     4861 atagacacta tggttgatac taatatcaaa ggtcttttat atgtagcaaa agcgatcatt
     4921 cctatacttc gcaaacaaaa aagtgcttat atcttcaatc ttggctctgt agcagctaga
     4981 aatccttatt ttggtggcaa tgtatattgt ggaactaaag catttgtagg acaattttct
     5041 agggccttaa gaaatgattt aagaggagaa aatatcaagg ttacaaacat agctccaggg
     5101 ctttgcaaaa ctgaatttag tgaagttcgc tttaaaggag ataaggcaaa agccgatgca
     5161 gtctatgaag ggacgcaata cataagtgca caagatatag caaaagtagt gatgtcaatc
     5221 atcaatctgc caagccatat caatgtcaat gaaatagaat taatgcctgt tactcaaact
     5281 tggaatggct tttatataga gcaaaatcaa tgagattttt agtatttttc ctaccgcctt
     5341 tacttgcatt tgccaataca catcaagcta cggcaaatgc aaatttattt ggagttttca
     5401 ctcttatacc tcctttggtt gctatcactc tagcttttat tacaaaagat gtgatcttgt
     5461 ctctttttgc aggagtttta agcggaacct tcttgcttag tcttacttct aatatttttc
     5521 aagccgacag cttaagtttt attcattttt ataatactgc gatagattct ttttcaaaaa
     5581 ttatttctta tattttagaa tcaacttcag atcctgtaaa tgctggtatc atcttgcaaa
     5641 ttttatgcat aggtgggctt gttgcactta tcaccaaaat gggtggcgca aaagctgtgg
     5701 ctataaaatt tgcaaaaaga gcaaaatcag cagtatcggc acaagtaaat acttggtttt
     5761 taggtttgtt aatctttttt gatgattacg ctaatttact catcgtagga cctatcatgc
     5821 gtcctttagc agataaattt aaaatttctc gtgaaaaatt tgcctttatt atcgattcta
     5881 cagctgcacc cgttgcaggg attgctgtga tttctacctg gataggttta gaagtatctt
     5941 taatcaaaaa tgcctatgaa gatataggca ttagcaatat cagcgctttt ggggtttttg
     6001 ttgaaaccat accctataga ttttacaata tttttatgct tttctttgtt ttaatgactg
     6061 cgcttatggg gcgtgaattt ggtcctatgt taaaagctga aattcgtgca agaactacag
     6121 gacaaatcgt tcctttatca aaatcaagca ccctagatac cgcagaactt gaagatcagt
     6181 ttttagctcc aaaagaagat attaaaatcc gtgcattaga tgctacgatt cctattttaa
     6241 ctttgattgt tttagctata cttggatttt attttaatgg actaagtact ttagaaggtg
     6301 aagaattact aaaagcaaat gcaaatcctt tatcttttga aacccttagg ctagcttttg
     6361 gaagtgcaaa ttcttctgtg gtgctttttc aagccgcctt atttgccgct attgtagcaa
     6421 tttttattgg agtgtatcgc aagattttta attttaaaga agcggttgaa acttggatat
     6481 atggttggaa aactatgatt tttaccatag ttttactttt gtttgcatgg tcgctttcaa
     6541 gcatagtaaa agagcttgga actccagaat ttatctcaag cttgctcgct gataaattgc
     6601 ctgaatttat cctacctgct accatttttg cttttgcttc gcttatttct tttgcgatag
     6661 gaacaagcta tgggactatg ggtattttaa tgcctttggc ggtgccttta gcttataagg
     6721 ttgcacaaat aaatgcaatg gatatggatg caatgtatca ttatatggtg attaacataa
     6781 gttgtgtctt aactggagcc atttttggaa accattgttc gcctatttca gacaatgtaa
     6841 tcctttcatc aatgagtgca aaatgtgatc atatggagca tgttcgcact caaattcctt
     6901 atgccttatt tatttgtgta atttctttat ttgctggtta tatacctgtt tctttagggc
     6961 ttagtgtatg gttggttctt cctttaaatt taattcttat tgcatttttg cttagaatta
     7021 tcggaaagaa agtttcatga gtcttcaaga atttggaaat tttttaaaat tagaagaaaa
     7081 agcttctttt ataaaagaat ttttcaaaga tttttatcaa ggaaatttcg agcttttttc
     7141 ttccaaagat aaacattacc gcacaagagc agagctttca ttttatcatg ataaagacga
     7201 aatttattat gcgatgtttg aaaataaaaa gaaaatcatc atagaaagct tagaatttgc
     7261 agatgaaaaa atcaccgctt ttatgcccaa actcttaaaa caaattcgca acaatacaaa
     7321 tttaaaagaa aaactttttg gtgtagagtt tttagcgact aaaaacgagt taagcaccac
     7381 tctactttat cataaaaata tagagcttat ttacaatgac ttaaataatt taagcttaga
     7441 acttgatgca aatttaatcg caagaagcaa aggtaaaaaa cttgttttta aaaaagaaaa
     7501 tttaagacaa gagcttgata tacaaggtag aaaaatattt tataaattta acaatgattg
     7561 tttcatacag cctaatacct ccatcaatga aaaaatgata acttgggtgt gtgaaaattt
     7621 aaaaacccaa gaaagaaaag acttgcttga gctttattgt ggatatggaa attttactct
     7681 agctttagca atttttttta acaatgtact agccactgaa atttcaaaaa gcaatattaa
     7741 ttttgccttg cttaattgca agatcaacaa tatctcaaat atccatttta caagactttc
     7801 aagcgaggaa ttatcccaag ctttaaaaaa agaaagggaa ttttttcgct taaaagatat
     7861 tgatttagat aattttaatt tttctcatat tttagtcgat ccaccgcgtg caggacttga
     7921 taaaagtgta attgatttaa ttaaaaatta tgaaaacatc atttatattt cttgtaatcc
     7981 tatcagcttg aaagaaaatt taaaagaact tgctcttacg cataaagttg aaaaatttgc
     8041 gctttttgat cagtttgtta atactccgca tttagaatgt ggagtacttt taaaatcttt
     8101 acattctaag caatcttcaa tttgaaagtt gataaattat aaaaaataat aattcatcaa
     8161 cttagctaaa accacaataa aaatacaaag cataaaaaca aaaggatgta taaaacgcgt
     8221 taaaggattt tttctcttta gcacaaaatg aaaaaataaa gaaaacacca ctaaagacaa
     8281 aatactaaag gctaaaatca attttatcaa aaaaattaaa tttaaaggat taagatgaaa
     8341 gcttatcatc gcaccaccac ttaaaaatag caataatacg ataaaaggca taatcttaac
     8401 acccacggaa gaaaaaagat ttttatcaaa atttggattt tttctcttaa ttatattgag
     8461 tataaaaata tcgacaaata aataacc
//
LOCUS       DAQUWA010000072         8466 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.072, whole genome shotgun sequence.
ACCESSION   DAQUWA010000072 DAQUWA010000000
VERSION     DAQUWA010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8466)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8466)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8466
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.072"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..385)
                     /locus_tag="R8X70_001542"
     CDS             complement(<1..385)
                     /locus_tag="R8X70_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929302.1"
                     /translation="MKKLLIIPIIIFLCFIAQIFYMGHINESFFYNLTQTQNPYYEIK
                     NINFHKGFLNSKADFTIEDKYNLGLISKLDFKFNNNYFSKFIAQGKLSNPFKLLDDKL
                     QNKELAWFKIQSIQNDLNVSIQFQDI"
     gene            complement(488..841)
                     /locus_tag="R8X70_001543"
     CDS             complement(488..841)
                     /locus_tag="R8X70_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929303.1"
                     /translation="MKKGILIASALLTGSMLLADSVKLQGTIAEVYDNNKTLLIDSIY
                     GGQMAVRILPNTEIDMDNCGIFGMDKHGKFKDLKVGDFLEVKLYYPGYSSNPTQAPAI
                     PVAREIDIECYKKAY"
     gene            1025..6277
                     /locus_tag="R8X70_001544"
     CDS             1025..6277
                     /locus_tag="R8X70_001544"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012433.1,HMM:NF013957.1,HMM:NF019298.1,
                     HMM:NF019323.1,HMM:NF023400.1,HMM:NF036531.1,
                     HMM:NF037155.1,HMM:NF037694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929304.1"
                     /translation="MLKNILISLILSFLLIACGGEKNKNSSELIRAQSQGLLKNHEAI
                     FVEFKEAIVDFDEMSIDAKINSKNSKILLTKASDSRFLLDLTYLEANQNYKIEFIYKN
                     IPIVLEFQTGWIENFTYKAQLEQDEEKAYLHLNYSFGSTYNWQFEDKTQEGLKITLDG
                     KDLAFSLGEFSLDTDDIKLLDRPQELVLTYDEKIMGFKEAKVLQFQIPSKSKNNDFRL
                     ISAEEKDQIATLKFSKELAENQAFQDFIQISPELNFRAWSIGKELKISANFEPGEKYK
                     VKIAKGLKSNQGLINQGEEANIILQKDLDPSLVFANDGVFLPSGAEYQVYIKSRNVKK
                     IHLKVSQIFANNISEYLRYKNLVGKKDDSTQEAFYSSDGFNYVAKNVIDKKIELKNQK
                     NTWINTALDLSDLKGKTGIFSVSLSVDANDLDYKGENVYRIINKASVSKNLIFSNIAL
                     SAQNLNKQLVVHARDFSKNEALENVKIELVSKQNQILQSQNTNSNGDVKFQIQEDDEI
                     LYILASKENQISVLRFSNPLSTDGYDVEGDQNHEMIKAFIYTDRGVYRAGDSVHLSVV
                     ARENTNPLKHPISFTLINPKNQKIIENQILKSQNDIYYTQIHLDKNAINGLYRAIFNI
                     AGVEFSKDILVQSVVPNRIKVELNADENRSLDDGNLNYELSSKYLFGALASNLKYQSF
                     VYFSPKNYHNPKYKDYIFINPSSLIIRASADDKGNLDEKGRVQSSVEIPENILNSQGY
                     NFNARIVSEVFEKGGRSVKAVRDVNLNRYDYFVGMKALTNSYVSEGETIDFYAIVSDL
                     KENLVSGKTLEYRIYQNDYYWWWDYDSYDEFLRSIKQDHNTKLIEKGELTSSSEPMKF
                     SFNTSNYYGQMFIELIDKESGISAGQSFYVSSWGEPSYADVVSSLKIKSDKNKYKIGQ
                     SAKIEFESVAGAKALITLSSNSKIIDRFVMDTQGESTSIELAMKKEYAPNIYVSVSLF
                     QDYNKIDNDRALRLFGVIPLYVEDENTKLNLELKTPDKILPNSDFEIEIQSKDKRAFN
                     YTVAIVDEGLLDLTDFKTPDIWEGFYAKTGFTLKTYDTYSQIIPKFTGGDSVSKIGNL
                     RADKNRDDSAQRFKPVVLFNAPARSDEAGFAKLKFKMPSYMGLVRVMVVANENDAYGS
                     ISKDMQVSAPLVLLETLPRTLKIGDNFTLLTQIFKTENRIKNATLSVRSKNSLIKISP
                     DTQAIDFKNATNLEVIMDANVSDNRIGKELLEFELKSENYTYKNEIEIDIKPINAYTY
                     ENNTSLIKAGESKEFIIKDYILGTTNATLKLSPTPILDMDKRINYLLNYPYGCIEQTT
                     SAVLPQLFLDKFSTEFDKQKAINNINAAIERYANFQTADGGFAYWQGGDESNAWGSNY
                     AGMFLILAKQNGYFVPDSMYERWLKYEQNFVQKSIYHDYMMDIKANSLYLLAMAKKPN
                     ISEMNLLYDSLNTLSTEAKWQLAAAYKLAGVEDTAKQIASKISIEPDSKYSSYTYGSL
                     IRDEAIIANAYKQIYGTNNEELLQKISDTLLSKDYLSTQSTGYALYALAMGANLENMN
                     ENFMDATLKIGDQVHTIDQNQMQIFSFNNEKAIINANKDIFVSFGVEGVKAGENSAFS
                     NKISLDRAFYDEKGNKISPSEIGSGQTFYMRISASLNEGANYVSNIALTQILPSGWEV
                     SNTLLDDNTPSFIKNSSYDFIDVRDDKIMWFFSLNKNRTHHFYIKLNAITPGSYTLSG
                     AYVEAMYDDTYRALSESEKVVVKR"
     gene            6285..>8466
                     /gene="pbpC"
                     /locus_tag="R8X70_001545"
     CDS             6285..>8466
                     /gene="pbpC"
                     /locus_tag="R8X70_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HEF2929305.1"
                     /translation="MKNALKIFSFLLLFFLAYVFYVYFSFDKNTLLDDFKSRYSKILY
                     DKNGEILSVFLNDEEQWHIKSTDIPKRLKVSVINYEDRKFYSHFGVDFLALMRAFVNN
                     FNSTQRSGASTISMQTIKLWDKKDRTYFNKFNEIIQSLALENAFSKDEILKLYLSNAP
                     YGGNLIGYEAAILFYFDKNPKDLTWAQAALLAILPNQPGLINLEKNKTKLLDKRNKLL
                     AKLYERKLINKDIYELSLKEPLPNFKPRKNIAPHLALRLLSDDNKEIFSSIDKKIQLK
                     IEKKAKEFSYTLQQKGIQNLAIILADTKTRKVLAYVGSQDFYDMANLGQINGNIAKRS
                     VGSTLKPFLYALSIDEGIIAPDSILLDVPTFFSNFNPQNANKKYYGIISAKEALQRSL
                     NVPFVSLLQDYGYEKFFYKLKAFLNFEDENYKRYGLSLILGTKELSLEDLIKLYLGLA
                     NYGELANLSFIRDENLSGVARMFSKGSAYLTLEAMKELQRVGLENYNKEKIISWKTGT
                     SYGRKDAWAMGATPKYTLGVWVGNFSGEANANLYGVSIAGDLLFEILGLLDEVDLEFA
                     PPDDLMTIKLDSISKYRYDEDLNTSYINVLYPKGANILRTSPFLKKVYEYQGRELDSK
                     DIHFKDAKALIKLDFPAYALHFFQQRNFKFSNKKGVKIIYPKDNLKLILAKDLNGMKG
                     LVAKVANLNNEKLFWYLNQKLIYEGDENTQNLNLKEGKYQLFIIS"
BASE COUNT         3118 a         1029 c         1467 g         2852 t
ORIGIN      
        1 tgatatcttg aaattgaatt gatacattaa gatcattttg aatagattgt atcttaaacc
       61 aagctaattc tttattttgt aatttatcat ctaagagttt gaagggattg ctaagttttc
      121 cttgtgctat aaattttgaa aaataattat tgttaaattt aaaatcaagc tttgaaatta
      181 aacctaaatt atacttgtct tctatggtaa aatcagcctt tgaatttaaa aaacctttat
      241 ggaaattgat attttttatc tcataatagg gattttgtgt ttgagtaaga ttataaaaaa
      301 aactttcatt aatatgtccc atataaaaaa tttgcgcaat gaagcaaaga aagataataa
      361 taggaattat aagtagtttt ttcaatcttt tttccttaaa caaatttaag tactatttta
      421 caaattcctt gctaaaaaaa gtttaaattt tgaagaaatt aaatttgctt actaaaaagt
      481 aagcaaatta ataagctttt ttgtaacact ctatatcaat ttctcttgct acaggaatcg
      541 caggtgcttg agtaggatta gatgaatatc caggatagta aagttttact tcaagaaaat
      601 ctcctacttt taaatctttg aattttccgt gtttatccat tccaaaaatc ccacaattat
      661 ccatatcaat ttcagtattt ggcaatatcc ttacagccat ttgcccgcca tagattgaat
      721 ctataagtaa agttttatta ttatcataaa cctctgctat agtaccttga agttttacac
      781 tatctgcaag aagcatagag cctgttaaaa gtgctgatgc gattaaaata ccttttttca
      841 ttttgtctcc ttttttaaaa gtgatgacat tataaaattt ttaagtgaag tgagtgtgaa
      901 attggataaa atataatttt ttagatattt gatttgagtt tttaaaaaat atcaatgaat
      961 ttttaattaa aagtaagtag aatatcttaa ataatgtcga gcttaatttt tcaaaggaat
     1021 attaatgtta aaaaatatat tgattagttt gattttatct tttttattga tcgcgtgtgg
     1081 cggtgagaaa aataagaatt caagcgagtt aattcgtgca caatctcaag gacttctaaa
     1141 aaatcatgaa gcaatttttg ttgaatttaa agaagctatt gttgattttg atgaaatgag
     1201 tattgatgca aaaatcaatt ctaaaaattc aaaaattcta cttacaaagg catcagactc
     1261 tagattttta ctagatttaa cttatttaga ggctaatcaa aattataaaa tagaatttat
     1321 ttataaaaat attcctattg ttttagaatt tcaaacaggg tggatagaaa attttactta
     1381 taaagctcaa ttagagcaag atgaagaaaa agcttatttg catttaaatt atagctttgg
     1441 aagcacttat aattggcaat ttgaagataa aacacaagaa ggtttaaaaa tcactttaga
     1501 tggcaaagac ttagccttta gcttgggtga atttagtctt gatactgatg atattaagct
     1561 tttagataga cctcaagaac ttgttttaac ttatgatgaa aaaatcatgg gttttaaaga
     1621 agccaaagtg cttcaatttc aaattcctag caaatcaaaa aataatgatt ttagactcat
     1681 tagtgcagaa gaaaaagatc aaattgctac tttaaaattt tctaaagaac tagctgaaaa
     1741 tcaagccttt caagatttta tccaaatatc acccgagctt aattttagag cgtggagtat
     1801 aggaaaagag ttaaaaattt cagctaattt tgagccagga gaaaagtata aagttaaaat
     1861 cgcaaaaggt ttaaaatcaa atcaaggctt aatcaatcaa ggtgaagaag caaatatcat
     1921 cctacaaaaa gacctagatc caagtcttgt ttttgcaaat gatggggtat ttttgcctag
     1981 tggggcagaa tatcaagttt atatcaaatc gcgcaatgtt aaaaagattc atttaaaagt
     2041 aagtcaaatt tttgcaaaca atataagtga gtatttgcgt tataaaaatt tggtgggtaa
     2101 aaaagatgat agcactcaag aagcgtttta ttcttcagat ggttttaatt atgttgctaa
     2161 aaatgtcatt gataaaaaaa tagagcttaa aaatcaaaaa aatacttgga taaatactgc
     2221 tttagactta agtgatttaa aaggtaaaac tggaattttt tcagtgagtt taagtgttga
     2281 tgctaacgat cttgattata agggtgaaaa tgtatatcgt attataaata aagctagtgt
     2341 cagtaaaaat cttatttttt ctaatatcgc tttaagtgct caaaacctaa ataagcagct
     2401 cgtagttcac gcaagagact ttagtaaaaa tgaggcctta gaaaatgtaa aaatagagct
     2461 tgtaagtaag caaaaccaaa ttttgcaaag ccaaaatacc aattctaatg gagatgtgaa
     2521 atttcaaatt caagaagatg atgaaatact ctatatttta gcaagcaaag agaatcaaat
     2581 cagtgtttta agatttagca atcctctatc cacagatggt tatgatgtag aaggggatca
     2641 aaatcatgag atgataaagg cgtttattta cacagatcgt ggggtttata gagcgggtga
     2701 tagtgtgcat ttaagtgtgg ttgcaagaga aaatacaaat ccgctcaaac accctataag
     2761 ttttacttta attaatccta aaaatcaaaa aatcatagaa aatcaaattt taaaaagtca
     2821 aaatgatatt tactatacgc aaattcattt agataaaaat gccattaatg gactttatag
     2881 ggcaattttt aatattgctg gggtggaatt tagtaaagat attttagttc aaagtgtggt
     2941 gccaaatcgc attaaggtag aattaaatgc tgatgaaaat agaagtttag atgatgggaa
     3001 tttaaactat gagctttctt caaaatatct ttttggagcc ttagcttcaa atttaaaata
     3061 tcaaagtttt gtatattttt ctccaaagaa ttatcataat cctaaatata aagattatat
     3121 ttttattaat ccaagttcat tgattatcag agcaagtgct gatgataagg gaaatttaga
     3181 tgaaaagggc agggtgcaat caagtgttga aattcctgaa aatattttaa attctcaagg
     3241 ttacaatttt aatgcaagga ttgtttcaga agtctttgaa aagggtggca gatctgtaaa
     3301 agctgttagg gatgtaaatt taaatcgtta tgattatttt gtgggaatga aagctttgac
     3361 aaattcttat gtatctgagg gagaaacgat cgatttttat gccattgtaa gtgatttaaa
     3421 agaaaattta gtttcaggca aaactttaga gtatagaatt tatcaaaatg attattattg
     3481 gtggtgggat tatgattctt atgatgaatt tttgcgctct attaagcaag atcacaatac
     3541 caaacttatt gaaaaagggg agcttactag ctctagcgag cctatgaaat ttagctttaa
     3601 cacaagcaat tattatggac aaatgtttat tgagcttata gataaagaaa gtggaataag
     3661 cgcagggcaa agtttttatg taagctcttg gggagagcca agctatgctg atgtggtgag
     3721 ttctttaaaa attaaaagtg ataaaaacaa atataaaata ggacaaagtg caaaaataga
     3781 atttgaaagt gttgcaggag ctaaagcact cataacttta agttctaatt ccaagattat
     3841 tgatcgtttt gtgatggata ctcaaggtga aagcacgagt atagaattgg cgatgaaaaa
     3901 agaatatgca ccaaatatct atgtaagcgt gagtttattt caagattata ataaaattga
     3961 taatgatcgt gccctaaggc tttttggtgt aattcctttg tatgtagaag atgaaaatac
     4021 aaagcttaat ttagaattaa aaactcctga taaaatttta cctaatagtg attttgagat
     4081 agaaattcaa agcaaagata aaagagcttt taattatact gtggctattg tagatgaagg
     4141 acttcttgat ttaacagatt ttaaaacccc tgatatttgg gagggctttt acgcaaaaac
     4201 aggatttact ttaaaaactt atgatactta tagtcaaatt atccctaaat ttaccggagg
     4261 cgatagtgtt tcaaagatag ggaatttaag agcagataaa aatcgtgatg atagcgcaca
     4321 gcgttttaaa cctgtagtgc tttttaatgc tcctgcaaga agcgatgaag caggctttgc
     4381 aaaacttaaa tttaaaatgc cttcttatat gggtttggtt cgtgtgatgg ttgtggccaa
     4441 tgaaaatgac gcttatggta gcatttctaa ggatatgcaa gtaagtgcac ctcttgtgtt
     4501 gcttgaaact ctgccaagga ctttaaaaat aggcgataat ttcacgcttt taactcaaat
     4561 ttttaaaaca gaaaatcgta ttaaaaatgc aaccttgagc gtaagaagta aaaattctct
     4621 tataaaaata agtccagata ctcaagctat agactttaaa aatgctacta atttagaagt
     4681 gataatggat gcaaatgtaa gtgataatag gattggtaaa gagcttttag aatttgaatt
     4741 aaaaagtgaa aattatactt ataaaaatga aattgaaatc gatatcaaac ctatcaatgc
     4801 ttatacatat gaaaataata ctagtttgat taaagcagga gaaagtaaag aatttattat
     4861 aaaagattat attttaggga ctacaaatgc aactttaaag ctttcgccta cacctatttt
     4921 agatatggat aaaagaatta actatctgtt aaattatcct tatggctgta tagaacaaac
     4981 tacctcagca gttttgccac aacttttttt agataaattt agcacggaat ttgacaagca
     5041 aaaagcgatt aataatatca atgcagccat cgagcgttat gccaattttc aaaccgctga
     5101 tggaggattt gcttattggc aaggaggaga tgaaagcaat gcttggggaa gtaattatgc
     5161 gggaatgttt ttgattttag ctaagcaaaa tgggtatttt gtgcctgatt ccatgtatga
     5221 aagatggtta aaatatgagc aaaattttgt tcaaaaaagt atatatcatg attatatgat
     5281 ggatataaaa gcaaattcat tatatctttt ggctatggca aaaaaaccta atatcagcga
     5341 gatgaatttg ctttatgata gtttaaatac gctaagcact gaagctaagt ggcaattggc
     5401 tgcagcatat aaacttgcag gtgttgaaga tactgcaaaa cagattgcaa gcaagatttc
     5461 tatagagcct gattctaaat attcttctta tacttatggt tctttaataa gagatgaggc
     5521 tattatcgca aatgcttata aacaaattta tggcactaat aatgaagaat tacttcaaaa
     5581 aatcagcgat accttacttt caaaggatta tttatccaca caaagtacag gctatgcttt
     5641 atatgcttta gccatgggtg caaatttaga aaatatgaat gaaaatttta tggatgcgac
     5701 tttaaaaata ggtgatcaag tacatactat cgatcaaaac caaatgcaaa ttttttcttt
     5761 caataatgaa aaagctatta taaatgcgaa taaagacata tttgtaagtt ttggagtaga
     5821 gggggtaaaa gcgggtgaaa attcagcttt tagcaataaa atcagtttag atcgtgcttt
     5881 ttatgatgaa aagggtaata aaatcagtcc tagcgagatt ggttctggac aaacctttta
     5941 tatgagaatt tcagcgagct taaatgaggg tgcaaattat gtttctaata tcgctttaac
     6001 acaaatttta ccaagcggtt gggaagtgag caatacgctt ttagatgata acactccaag
     6061 ttttattaaa aattcaagct atgattttat tgatgttagg gatgataaaa tcatgtggtt
     6121 ttttagttta aataaaaatc gcacgcatca tttttatata aaacttaatg ccataactcc
     6181 aggaagttat actttaagtg gtgcttatgt agaagcgatg tatgatgata cttatagagc
     6241 tttaagtgaa agtgaaaaag tagttgtgaa acgctaaata aaacatgaaa aatgctttaa
     6301 aaatttttag ctttttgcta cttttttttc ttgcttatgt tttttatgta tatttttctt
     6361 ttgataaaaa taccttactg gatgatttta aaagccgtta tagtaagatt ttatacgata
     6421 aaaatggcga aattttaagt gtttttttaa atgatgaaga gcaatggcat atcaagagca
     6481 ctgatattcc caagcgtttg aaagtctctg tgattaatta tgaagatagg aaattttatt
     6541 ctcattttgg agtagatttt ttagctttaa tgcgggcttt tgtaaataat tttaattcta
     6601 ctcaaagaag tggtgcaagt actattagta tgcaaacgat taagctttgg gataaaaaag
     6661 atagaactta ttttaataaa ttcaatgaaa ttatacaaag cttagctttg gaaaatgcct
     6721 tcagtaagga tgaaatttta aagctttatt taagcaatgc tccttatggc gggaatttaa
     6781 tcggttatga agctgctatt ttattttatt ttgataaaaa tcctaaagat ttaacttggg
     6841 ctcaagctgc tttgcttgcg attttaccca atcaaccagg acttattaat ttagaaaaaa
     6901 ataaaacgaa acttttagat aaacgcaaca aacttttagc aaaactttat gaaagaaagt
     6961 taatcaacaa agatatttac gaactttctt taaaagagcc cttgccaaat tttaagcctc
     7021 gcaaaaatat tgcaccccat cttgctttaa gacttttaag tgatgataat aaagaaattt
     7081 tttcaagcat agataaaaaa attcaactta aaatcgaaaa aaaggctaaa gaattttctt
     7141 atactttgca acaaaaaggc atacaaaatt tagccattat tttagccgat actaaaacac
     7201 gcaaagtttt agcttatgtg ggttcgcaag atttttatga tatggcaaat ttaggacaaa
     7261 ttaatggaaa tattgccaag cgcagtgtgg gttctacttt aaaacccttt ttgtatgctt
     7321 taagtattga tgaaggcatt atcgcaccgg attcaatttt gcttgatgtt ccaacctttt
     7381 tttctaattt caatccccaa aatgcaaata aaaaatatta tgggataatc agtgcaaaag
     7441 aagctttaca aagatcttta aatgttcctt ttgtatcgct tttgcaagat tatggttatg
     7501 aaaaattttt ttataaatta aaagcttttt taaattttga agatgagaat tacaagcgat
     7561 atgggctttc gcttatttta ggaactaaag aattgagtct tgaggatctt ataaaacttt
     7621 atttgggttt ggcaaattat ggagagcttg ccaatctttc ttttataaga gatgaaaatt
     7681 taagcggagt agcaagaatg ttttctaagg gtagtgcgta tttaacctta gaagcaatga
     7741 aagaacttca aagagtgggt ttagaaaatt acaataaaga aaaaattatt tcttggaaga
     7801 cgggcacaag ttatggtaga aaagatgctt gggccatggg cgcaactcca aaatatacct
     7861 taggagtttg ggtaggaaat tttagcggtg aagctaatgc aaatttatat ggcgtgagta
     7921 tagcaggaga tttgcttttt gagattttag gacttttaga tgaggtagat ttggaatttg
     7981 cgccgcctga tgatttgatg acaatcaagt tagatagtat cagtaaatat agatatgatg
     8041 aggatttaaa tacaagttat attaatgttt tatatcctaa aggggcaaat attttaagaa
     8101 cttccccttt tttgaaaaaa gtttatgagt atcaaggtag ggagcttgat tctaaggata
     8161 ttcattttaa agatgcaaaa gcattgataa agcttgattt tcctgcttat gcactccatt
     8221 tctttcagca aagaaatttt aaattttcaa ataaaaaggg tgttaagatt atctatccta
     8281 aagataattt aaaacttatt ttagccaaag atttaaatgg aatgaaaggt cttgtggcaa
     8341 aagtagctaa tttaaataat gaaaagcttt tttggtattt aaatcaaaaa cttatttatg
     8401 agggagatga aaatacgcaa aatttaaatt taaaagaagg caaatatcag ctttttatta
     8461 tttctc
//
LOCUS       DAQUWA010000073         8455 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.073, whole genome shotgun sequence.
ACCESSION   DAQUWA010000073 DAQUWA010000000
VERSION     DAQUWA010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8455
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.073"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..1190)
                     /locus_tag="R8X70_001546"
     CDS             complement(<1..1190)
                     /locus_tag="R8X70_001546"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEF2929306.1"
                     /translation="MRISLFGYGKTTQAIAKNLANQFGPFDIYDDHFQEKSKDKWGNH
                     LLNPKEFDEKVSELEIPSPGFPPNHNLIKKAKNLQSEYDFFYDAMPKSVWISGTNGKT
                     TTTQMATHLLSHVGAVMGANVGFPLAELDLNAKIWILETSSFTLHYTHTAKPEIYALL
                     PISADHLSWHGSFENYAKDKLSVLERMNECDIAILPEIYAKTPTKAYIISYKDEFDLA
                     QKMGIDIEKISFKSPFLLDAVMALSIEKILLDSLSYELLNQFIMEKNKLEELQDSQGR
                     LWVNDTKATNENAVMAALNRYKNKKIHLIVGGDDKGVDLSALFNFMKNFNIELYAIGL
                     STQKMLDYALKANLKARKCEFLENAVQEISKTLKNNEVALLSPACASLDQFSSYAQRG
                     EKFK"
     gene            complement(1190..2251)
                     /locus_tag="R8X70_001547"
     CDS             complement(1190..2251)
                     /locus_tag="R8X70_001547"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEF2929307.1"
                     /translation="MYYLSYFSDYAFFTYISVRAGFAFFIALCLSLFIMPKFIAWAKN
                     KNANQPIYELAPQTHKVKSQTPTMGGLIFIGCAVFTSLLCAKLDNVFTITALLCLVLF
                     CLIGLVDDLGKILKKDNHSGLSPKMKLLAQISVGLICILPLYFSPEFNTEFYLPFYKY
                     PLFDMKIFALAFWILVLISSSNAVNLTDGLDGLATVPSIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAII
                     SKNEILLLLVGFVFALETISVILQVGSFKIFNKRVFKMAPIHHHFEKIGWVENKIIVR
                     FWMIALLSNLLALASIKLR"
     gene            2331..3809
                     /locus_tag="R8X70_001548"
     CDS             2331..3809
                     /locus_tag="R8X70_001548"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEF2929308.1"
                     /translation="MRQKCILVITDGIGFNKEKDFNAFEAAKKPNYERLFREVPNSLI
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGQIIYQNLVRINKAIESCELEKNANLKKLLQK
                     CKRVHVIGLYSDGGVHSMDTHFNALLEICAKNGNEVFAHAITDGRDVSPTSGLEFIRK
                     LKNHCEEIGVHFATLCGRFYAMDRDKRWERVKEYYDCLLGKSKGVSNWVDYIEECYQN
                     ETTDEFIQAAKNENYKGMQEDDGLIFVNFRNDRMKQLIEVLNSQNFKEFEREKVFENL
                     LTMSVYDDKFNIPVLFEKEEIKNTLSETISKAGLTQLHTAETEKYAHVTFFFNGGKEE
                     LLENETRVLIPSPKVKTYDEKPEMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNAAIKAVEAVDVCLGEVVECARKHDYAFIITSDHGNCEAMQDKKGNLLTNHTTFDV
                     FVFVEAKGVDKLKENMGLSNIAASVLKILNLEIPKEMNEALF"
     gene            3874..4617
                     /gene="fabG"
                     /locus_tag="R8X70_001549"
     CDS             3874..4617
                     /gene="fabG"
                     /locus_tag="R8X70_001549"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEF2929309.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLASFGLKVWINYRSKPELAD
                     ALKDEILAQGGNAAVIKFDASKEDEFENGIKTIVESDGELSYLVNNAGVTNDKLALRM
                     KLEDFTSVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQTNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEILSDEIKQAYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            4627..5034
                     /locus_tag="R8X70_001550"
     CDS             4627..5034
                     /locus_tag="R8X70_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEF2929310.1"
                     /translation="MDLKEIEQFLDENTPAFLATLGTCGNPRVRPMQSPLLVGDRIYF
                     GTSNNKGLFKHIQNYNGIEFCSCSREGVFLRLRANAVFEPNAKVKELMFEKYPYLVSL
                     YENPQNSRFEVFYLDNLSAKMQFPNGDFKLYKA"
     gene            complement(5054..5719)
                     /gene="tenA"
                     /locus_tag="R8X70_001551"
     CDS             complement(5054..5719)
                     /gene="tenA"
                     /locus_tag="R8X70_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HEF2929311.1"
                     /translation="MLFSRLIETNSHIWDEYLHHEFVKKLENGSLKEENFLFYLKQDY
                     IYLIHYAKCYARLALNAKNAEELRFAMKFQNYIIEGEIELHKSILKLGINADKLNVKD
                     ESLTNIAYTRYMLSVGESGDFLDMLVALSACAIGYGYIGAEIYKRLGKEKLQNHPYKE
                     WILTYSSDEFQSEIKEFEDFLNSYTQQISQEKFENLSEIFYNVVRLENAFWEHALQMK
                     MDI"
     gene            5833..6066
                     /gene="acpP"
                     /locus_tag="R8X70_001552"
     CDS             5833..6066
                     /gene="acpP"
                     /locus_tag="R8X70_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEF2929312.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIENLKK"
     gene            6100..7314
                     /locus_tag="R8X70_001553"
     CDS             6100..7314
                     /locus_tag="R8X70_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEF2929313.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICEGKSGVKKITLFDTTDF
                     PVQIAAEIENFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDANFDQNLDKEEFGVVS
                     AAGIGGLPNIEKNSVICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAIGEAYKSIALGNANKMLVIGAEAAICPVGIGGFASMKALSTRNDDPAHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGAKIYAELVGFGESADAHHITSPTLDGPL
                     RAMKKALKMAGNPKVDYINAHGTSTPVNDKNETAAIKELFGSEIPAVSSTKGQTGHCL
                     GAAGAIEAVISIMALDNGIMPPTINQFVSDEECDLDYIPNEARKADLRVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            7316..8254
                     /gene="accA"
                     /locus_tag="R8X70_001554"
     CDS             7316..8254
                     /gene="accA"
                     /locus_tag="R8X70_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HEF2929314.1"
                     /translation="MASYLDFEKNIQQIDEDIINAQIKGDTEAVAILKKNLEKEIAKT
                     YKNLSDFGRLQLARHPDRPYALDYIDLILNDAYEIHGDRTFRDDPAIVCFMGYLGEKK
                     LIVIGEQKGRGTKEKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGL
                     GAEERGQSEAIATNLYELSDLKTPTIAVVIGEGGSGGALAIGVADKLAMMKNSVFSVI
                     SPEGCAAILWNDPSKSEAATKAMKVTADDLKSQGLIDDVIEEPINGAHRNKEAAAVAI
                     ADYVKKALDELEKIDPRELASNRMQKILQLGAFSES"
BASE COUNT         2938 a         1171 c         1611 g         2735 t
ORIGIN      
        1 tctttaaatt tttctccacg ttgagcataa gagctgaatt gatctaagct tgcacaagca
       61 gggcttaata aagctacttc attgtttttt agcgttttgg aaatttcttg tacagcattt
      121 tctaaaaatt cacacttacg agcttttaaa tttgctttta aagcataatc aagcattttt
      181 tgagtgctaa gtcctatagc atagagttct atgttgaaat ttttcataaa attaaataaa
      241 gcgcttaaat ccacaccctt atcatcgccg cccacaataa gatgaatttt tttattttta
      301 tagcggttaa gagcggccat tacagcgttt tcattggtcg ctttagtatc attgacccaa
      361 agtctacctt gactatcttg taattcttcg agtttatttt tttccatgat aaattgattt
      421 aaaagttcat agcttagact atcaagtaga attttttcta tacttaaagc catgacagca
      481 tcaagcaaaa aagggctttt aaaagatatt ttttctatat cgatacccat tttttgagca
      541 agatcaaatt catctttgta agagataata taagcttttg taggtgtttt tgcgtaaatt
      601 tcaggcaaga ttgcaatatc acactcattc attctttcta aaacgctcaa tttatctttt
      661 gcataatttt caaagcttcc atgccatgaa agatgatccg cacttatagg tagaagtgca
      721 taaatttcgg gttttgcagt atgggtatag tgaagtgtaa aagatgaagt ttcaagtatc
      781 caaattttgg catttaaatc aagctcagcc agaggaaaac cgacatttgc tcccattact
      841 gctccaacat gtgaaagtag atgtgtagcc atttgtgtgg ttgtggtttt accatttgta
      901 ccactgatcc aaacagattt tggcatagca tcataaaaaa aatcatattc gctttgtaaa
      961 ttttttgctt tttttataag gttatggtta ggtggaaagc cagggcttgg aatttcaagc
     1021 tcgcttactt tttcatcaaa ttctttagga tttaaaagat gattacccca tttatccttg
     1081 cttttttctt gaaaatgatc atcgtagata tcaaaagggc cgaattgatt ggctaaattt
     1141 ttagctattg cctgtgtggt tttaccatat ccaaaaagtg aaattctcat tatcttaact
     1201 ttatcgatgc aagcgcaagt aaattagata gcaaggctat catccaaaaa cgcactatga
     1261 ttttattttc tacccagcct attttttcaa aatgatggtg tataggcgcc attttaaata
     1321 ctcttttatt gaaaatttta aagcttccca cttgtaaaat gacagaaatg gtttcaagcg
     1381 caaagacaaa gcctacaagt aaaagcaaga tttcattttt gcttatgatg gctaaaaaac
     1441 ctataaatcc acccaaggct aagcttccac tatctcccat aaaaacttgt gcaggatagc
     1501 agttatacca taaaaatccc ataagagctc caatcaatgc agcacagata atcactacct
     1561 cgcccaagcc ttgaatttta ggtaaaagca aatattcact ataatttaaa tttccactca
     1621 aatataaaaa tatacctaag gtagataaag aaaaaatgct aggaactgtt gcaagtccgt
     1681 caagtccatc ggttaaattg acagcattag agctggagat taagaccaaa atccaaaaag
     1741 caagagcaaa aattttcata tcaaaaagcg gatatttgta aaaaggaaga taaaattctg
     1801 tattaaattc agggctaaaa tataaaggta aaatacagat taatcctacg cttatttgtg
     1861 ctaaaagttt catttttggg ctaagtcctg agtggttgtc tttttttaaa attttaccca
     1921 aatcatccac aagtccaata aggcaaaaaa gcacaagaca aagcaaggcg gtgattgtaa
     1981 atacattatc caatttagca caaagaagac ttgtaaagac tgcacaacct ataaagataa
     2041 gcccacccat tgtaggcgtt tgagatttta ccttgtgagt ttggggtgct agttcataaa
     2101 tgggttgatt tgcatttttg tttttagccc aagcaataaa tttaggcatg ataaataaag
     2161 acaagcataa agcaatgaaa aatgcaaagc ccgcgcgtac actgatataa gtaaaaaaag
     2221 cataatcact aaaataagaa agataataca aaagctagcc ttctttttgg tttttaaaag
     2281 cttaatttta gtaaaatcta gccaaaaaat ttcttataaa agagtaaaaa atgagacaaa
     2341 aatgtatttt agttattaca gatggaatag gttttaacaa agaaaaagat tttaatgctt
     2401 ttgaggctgc taaaaagcca aattatgaga ggctttttag agaagtacca aattctttaa
     2461 ttaaaactag tggtttagcg gtaggtttgc ctgaagggca aatgggaaat agcgaagtgg
     2521 gccatatgtg tataggtagt gggcaaatta tctatcaaaa tttagtgcgt attaataaag
     2581 ctatagagag ttgcgaactt gaaaaaaacg caaatttaaa aaaacttcta caaaaatgca
     2641 aaagagtgca tgttattggt ttatatagcg atggtggggt tcattctatg gatacacatt
     2701 ttaatgcctt gcttgaaatt tgtgccaaaa atggaaatga agtttttgca catgcaatta
     2761 ctgatggacg cgatgtaagt cctacaagtg gattagaatt tataagaaag ctaaaaaatc
     2821 attgtgagga aataggcgtg cattttgcta cgctttgtgg ccgtttttat gctatggata
     2881 gagataagcg ttgggaaaga gttaaggaat attatgattg tttattaggc aagagcaagg
     2941 gtgtgtcaaa ttgggttgat tatatagaag aatgttatca aaatgaaaca actgatgaat
     3001 ttattcaagc ggctaaaaac gagaattata aaggcatgca agaagatgat ggattgattt
     3061 ttgttaattt tagaaatgat agaatgaaac aactcatcga agttttaaat tctcaaaatt
     3121 tcaaggaatt tgagcgagaa aaagtgtttg aaaatttgct tactatgagt gtttatgatg
     3181 ataaatttaa tattccagta ctttttgaaa aagaagaaat taaaaataca ctttctgaaa
     3241 ccatttccaa agcaggactt actcaacttc atactgcaga aactgaaaaa tatgctcatg
     3301 ttactttctt tttcaatgga ggaaaagaag aacttttgga aaatgaaaca agggttttaa
     3361 tcccaagtcc aaaggtaaaa acttacgacg aaaagcctga aatgagcgct tttgaagtat
     3421 gcgatgcggt taaaaaaggg atagaaaagg gcgaagattt tatagtggtg aactttgcaa
     3481 atggtgatat ggtaggccat acaggagatt ttaatgctgc cattaaggct gtagaagcag
     3541 tagatgtttg tttgggcgaa gtggtcgagt gtgcaagaaa gcatgattat gcctttatca
     3601 ttacaagtga tcatggaaat tgtgaagcga tgcaagataa aaaaggaaat ttattgacca
     3661 atcatacaac ttttgatgtt tttgtttttg tagaagctaa gggagtagat aagcttaagg
     3721 aaaatatggg acttagtaat atcgctgcaa gtgtgcttaa aatattaaat ttagaaattc
     3781 caaaagagat gaatgaggct ttattttgat ctgtttgcct tttgatatag atttttgtta
     3841 aaatttaatt ttatattttt tttaaggata gaaatgaaat ttagtggaaa aaatgtttta
     3901 attacaggtg caagtaaggg tattggtgct tctattgcaa aaactttggc aagttttgga
     3961 ttaaaagttt ggattaatta tcgctcaaaa ccagaacttg cagatgcttt aaaagatgaa
     4021 attcttgcgc aaggcggcaa tgcagctgtg attaaatttg atgcaagcaa agaagatgag
     4081 tttgaaaatg ggataaaaac tatagtagaa agcgatggag agcttagcta tcttgtaaat
     4141 aatgcaggtg ttacaaacga caaacttgcc ttaagaatga aactcgaaga ttttacaagt
     4201 gtagtggata caaatttgag ttctgcattt ttaggttgta gagaggcttt aaaaacaatg
     4261 agcaaaaagc gttttggtgc ggttgtgaat attgcttcaa ttgtcggtga aatggggaat
     4321 gccggtcaga ctaattattc tgcgagcaag ggtggaatga ttgctatgac taaatctttt
     4381 gctaaagagg gagcaagtag aaatttgcgt tttaattgtg ttactccagg ctttattaaa
     4441 agtgatatga cagagatttt aagcgatgaa atcaaacaag catatcaaga taatatccct
     4501 ttaaaacgct ttgcagaacc tgaagaagtt gcaaattgtg tagcattttt attaagtgat
     4561 tatgcttctt atgtgacagg tgatgtgctt aaaattaatg gcggattata tatgtaagga
     4621 aagtatatgg acttaaaaga aattgaacaa tttttagatg aaaatactcc tgcgtttttg
     4681 gcaactttag gaacttgtgg aaatcctagg gttcgtccta tgcagagccc tttacttgta
     4741 ggagatagaa tttattttgg tacttctaat aataaaggac tttttaagca tatacaaaat
     4801 tataatggta ttgaattttg ttcttgttct agagagggcg tttttttaag acttagagca
     4861 aatgcagttt ttgaacctaa cgcaaaagtt aaagagctga tgtttgaaaa atatccttat
     4921 cttgtaagcc tttatgagaa tccacaaaat tctagatttg aagtttttta tcttgataat
     4981 ttaagtgcta aaatgcagtt tccaaacgga gattttaaac tttataaagc ttaaagcaag
     5041 gattttcctt gctttaaata tccattttca tttgtaaagc atgttcccaa aaagcatttt
     5101 ctaaacgcac tacattataa aaaatttcgc taagattttc aaatttttct tgagatattt
     5161 gttgagtata agaatttaaa aagtcttcaa attctttaat ttcactttga aattcatctg
     5221 aactataggt taaaatccat tctttataag ggtgattttg aagtttttcc ttgccaagtc
     5281 ttttataaat ttcagctcct atataaccat aacctatggc acaagcactt aaagccacta
     5341 acatatctaa aaaatctcca ctttcaccca cgcttaacat atagcgtgtg taagctatat
     5401 tggtcaaact ttcatcttta acatttaatt tatcagcatt gatgccaagt tttaaaatac
     5461 ttttatgaag ttcaatttct ccttctataa tgtagttttg aaatttcatt gcaaagcgta
     5521 gttcttcggc attttttgca tttaaggcaa gtcgtgcata gcatttagca taatggatga
     5581 gatagatata atcttgtttg agataaaaaa gaaaattttc ttcttttaaa cttccatttt
     5641 ctaatttttt tacaaattca tgatgtaaat attcatccca aatgtgtgaa tttgtttcaa
     5701 taagtcgaga aaaaagcatt tcttactcct aaaattcaat ggttttttaa agtatagtca
     5761 aaaactataa atattttaag ttttttattg taaaatacgc tttattttaa tttttatcaa
     5821 ggagatatat aaatggcaac atttgatgat gtaaaagcag tggtagtaga gcaattaagc
     5881 attgatgcgg atgctgttaa gatggaatca aaaatcattg aagatttagg tgcagattct
     5941 ttggatgttg tagagcttat tatggcatta gaagaaaaat tcgaagtaga aatcccagat
     6001 agtgatgctg aaaaactaat taaaattgag gatgttgtaa attatatcga aaatcttaaa
     6061 aaataattta aaaaaattca ctttacaagg agcttgttct tgaaaagagt tgtagtaaca
     6121 ggtattggta tgatcaatgc cttgggttta gataaagaaa gttcttttaa ggcgatttgt
     6181 gaaggtaaga gtggtgtgaa aaaaatcact ctttttgata ctacagactt tccggttcaa
     6241 attgcagcag aaattgaaaa tttcgatcct ctagaagtag ttgacggtaa agaggttaaa
     6301 aaaattgatc gttttattca attgggcatt aaagctgctc gcgaagcaat gcaagatgct
     6361 aattttgatc aaaatttaga caaagaagaa tttggagttg tttcagctgc gggaattgga
     6421 ggtctgccaa atatagaaaa gaattcggtt atttgttctg aacgtggccc tcgtaaaatt
     6481 tctccatttt ttataccttc agctttagta aatatgttag gcggtttaat ttctatagaa
     6541 cacggactta aaggacctaa tatttcttgt gtaacggctt gtgcagcagg aactcatgct
     6601 ataggggaag catataaaag tatagcttta ggtaatgcta acaaaatgtt ggtaattggt
     6661 gcagaagctg ctatttgtcc tgtaggaatt ggcggttttg cttcaatgaa agctctttct
     6721 actagaaatg atgatcctgc tcatgcttca agaccttttg ataaagaaag agatggtttt
     6781 gtaatgggag agggtgcagg cgctttggtt tttgaagagt atgaagaggc taaaaagcgt
     6841 ggggctaaga tttatgctga attggttggt tttggagaaa gtgctgatgc gcatcacatt
     6901 acctcaccta cattagatgg acctttaaga gcgatgaaaa aagccttaaa aatggcagga
     6961 aatccaaagg tagattatat taatgcacat ggaacttcaa cgcccgtaaa tgacaaaaat
     7021 gaaacagctg caattaaaga gctttttgga agtgaaattc cagcggttag ctcaacaaaa
     7081 ggacaaacag ggcattgttt gggtgctgca ggagctattg aagcggttat tagcatcatg
     7141 gcattagaca atggaattat gccacctact attaatcaat ttgttagcga tgaagaatgt
     7201 gatttagatt atataccaaa tgaggccaga aaagcggatt taagagttgt gatgagtaat
     7261 tcttttggct ttggcggcac aaatggttgc gtggtattta aaaaagtaga ttgatatggc
     7321 ttcgtattta gattttgaaa aaaatattca gcaaattgat gaagatatta tcaatgctca
     7381 aattaagggt gataccgagg ctgttgctat acttaaaaaa aatctcgaaa aagaaattgc
     7441 taaaacttat aaaaatttaa gcgattttgg acgcttgcaa ctcgctcgtc atccagatcg
     7501 cccttatgca cttgattata tagatcttat tttaaatgat gcttatgaaa ttcacggaga
     7561 tcgtactttt agagatgatc ctgctattgt ttgttttatg gggtatttag gagaaaaaaa
     7621 acttatagtt ataggagaac aaaaaggacg tggcacaaaa gaaaagatcg ctagaaattt
     7681 tggtatgcct catcctgaag gttatagaaa agctttaaga gtggcaagac ttgcagagaa
     7741 atttcaaatt cctattttgt ttttgataga taccccgggt gcttatccag gtttgggagc
     7801 agaagaacgt ggtcaaagtg aagctattgc tacaaatttg tatgaactta gcgatttaaa
     7861 aactcctact atagctgtgg ttataggaga aggaggaagt ggtggagctt tggctatagg
     7921 tgtggctgat aagcttgcaa tgatgaaaaa ttcagttttt tctgtcattt ctcctgaggg
     7981 ttgtgcagct atactttgga atgatccttc taaaagtgaa gcagcaacaa aagctatgaa
     8041 agttactgca gacgatttaa aaagtcaagg cttaattgat gatgtgattg aagagcctat
     8101 caacggagcc catcgcaata aagaagctgc tgctgttgct atagctgatt atgttaaaaa
     8161 agccttggat gaattagaaa aaatagatcc gcgagaactt gcttcaaatc gcatgcaaaa
     8221 aattcttcaa cttggagctt ttagcgaaag ctaaaaactc tacttaataa aaatattctt
     8281 taaaatttca aattattcta aaaaattaaa attttgacaa taaagcaaaa cctacaaaaa
     8341 gaaaagttca ataaatataa gagataaata atgaatactt tatatccttt atatcacaaa
     8401 taaaacaata tagaagatgc aaagaagcat ttatactttt taatggataa aaaat
//
LOCUS       DAQUWA010000074         8378 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.074, whole genome shotgun sequence.
ACCESSION   DAQUWA010000074 DAQUWA010000000
VERSION     DAQUWA010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8378
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.074"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(1..1872)
                     /gene="dnaK"
                     /locus_tag="R8X70_001555"
     CDS             complement(1..1872)
                     /gene="dnaK"
                     /locus_tag="R8X70_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEF2929315.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVTDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLANEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVKDAGLDKNEIKEIVMV
                     GGSTRVPLVQEEVKKAFGKELNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLNELGEKVADSDKENIQKALDDL
                     RETLKNQNASKEEIESKMKALSEVSHKLAENMYKKDEPNAANDKKKKDDDVIDAEVE"
     gene            complement(1894..2424)
                     /gene="grpE"
                     /locus_tag="R8X70_001556"
     CDS             complement(1894..2424)
                     /gene="grpE"
                     /locus_tag="R8X70_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEF2929316.1"
                     /translation="MSEQKQEFENENAENSEHLQDENLQNIEDVEQNKLQKDYDELKD
                     KYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECQDEISLKI
                     KEGVQNTLDLFLKKLEKHGVALIKDEKEFDPNLHEAMFHVDSENHQSGEVVQVLQKGY
                     KIADRVIRPTKVSVAK"
     gene            complement(2421..3215)
                     /locus_tag="R8X70_001557"
     CDS             complement(2421..3215)
                     /locus_tag="R8X70_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HEF2929317.1"
                     /translation="MMKSRDKKDLILESIIQTYLLDNAPIGSNELNSNLCIPASTIRV
                     YLKRLSDEGLITQLHISSGRIPTILTMQNYWQSFWEKEQDKNIHIKNESFLKELSKEF
                     EIYCLVYGGRSLVLKEVLDLNAKFIVLDFKEEELVLKYEKEAWNFLQSLIGLDLSSIE
                     KIALRVHFIDLVEKIASLRQNLICYRSNEERAYQIYQNDDFVKLLDCQIHRHFKESLE
                     FEPLFKEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
     gene            complement(3516..5606)
                     /gene="cfrA"
                     /locus_tag="R8X70_001558"
     CDS             complement(3516..5606)
                     /gene="cfrA"
                     /locus_tag="R8X70_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent ferric enterobactin receptor
                     CfrA"
                     /protein_id="HEF2929318.1"
                     /translation="MKKICLSVCAIGLLSSNAISQNVELDSSIVSASGFTQDIKEAPA
                     TINVISKKELQSKPYRDVAEAIADIPGVDLYASKGKTGSYNITMRGITGYTLVLIDGR
                     RQGIGGEVGPNGFNEISNSLLPPISSIERIEVIKGPMSTLYGSEALGGVVNIITKKVS
                     DKWETSVSLDALLNENKDWGNTYGTSIYSSGPLMNDKLGLTLRIREFYRQQSNVEFTN
                     GSGQRVQGDQAQSPTKANNFNIGTRVSYLANNYNTFIFDIDFSRNHYDNKQGQLGTIT
                     SPGRTPGSLTGGYADIMEVDKFVTYLSHEGVYENFSITSGLQYNRVSNDGREVVGQAT
                     QPFLGENRDIVAEDIILDTKSVIPLGQSHILSAGGEYRLEKMQDKIANPTNFDQYLLA
                     IFAEDEYSIKDNLRLTFGARYNHHEIFGNNISPRAYLVYNPTDELTLKGGVSTGFRTP
                     YANRLINGAYNYSGQGRFPIYGNPDLKEETSLNYEIAAIYNNDLFYVSATGFLTNFKD
                     KISTQRYNKDNMIPGIGTCGADRCFKAINHGKVEYKGIELGAGISPLDNLNVNFAYTY
                     LDSEVKEAQDKSVIGKPEQDSLKHNIMLKTEYSFYNKITPWIKGEWQIDRYMGDTNIN
                     REYYKDIFLASMGVRYDINKQWSINAAIYNLFDKSFTNGWESYQNSGAPTWVNTYNRI
                     EEGRRIYISINGSF"
     gene            5931..6629
                     /locus_tag="R8X70_001559"
     CDS             5931..6629
                     /locus_tag="R8X70_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEF2929319.1"
                     /translation="MKTFISNHKNQSSFITLFVFTPLFFVFLYSKDFLHIQPNETIKE
                     NKFNMAIKHFVQNSSDMKPTQPTQTIQEPSNVQPKEPVQEIKKIKPRKEKPIAKPKKI
                     IPPANAKAISQPKKDTNMQQPIMQQQTPQASSYQSVSLTSNSEFLKEIKSAIDEALIY
                     PRQARKMRMSGEVLVEFTWTKEKKLENLKILKPSKYDFLNKSALETIRIASKKFPQYE
                     KTFHIKIPLVYKLS"
     gene            complement(6702..7535)
                     /locus_tag="R8X70_001560"
     CDS             complement(6702..7535)
                     /locus_tag="R8X70_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEF2929320.1"
                     /translation="MNTFFKMRYHRDLPNTYKFNQITIIKNHNKYYLAFSIIYDESNI
                     SLISSKDFDIKKAVDIDLNINEITLSSGELIATNSKLLSRAEYDLAFKRLQRKQSRRI
                     LKTKKEKTKLSHNFKKTQLKLNKIYEKSSNIKKDSYHKITSKLIQEFDLLAVEDLQIK
                     NMSKRAKLKNIKAKSGLNKSILNISFYQFSQYLEYKAKHNGKFFIKVNPQYTSKTCSV
                     CGNIKKNLMFKDRVYLCEKCGNTLHRDINAANNILKRGLKSFGLGISLEDYKLKAFRI
                     S"
     gene            complement(7965..8057)
                     /locus_tag="R8X70_001561"
     CDS             complement(7965..8057)
                     /locus_tag="R8X70_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929321.1"
                     /translation="MLETLKKYAENQGIEDNYPKKIYNQKEKKP"
BASE COUNT         2654 a         1530 c         1053 g         3141 t
ORIGIN      
        1 ttattcgact tcagcgtcga ttacatcatc gtcttttttc tttttatcat ttgctgcatt
       61 tggctcatct tttttataca tattttcagc caatttatga gaaacctcgc ttaaagcttt
      121 cattttgctt tcaatctctt ctttacttgc attttgattt ttcaaagtct cacgcaaatc
      181 atcaagagct ttttggatat tttctttatc gctatcagct actttttctc caagctcatt
      241 tagagatttt tccacttgat gcgccaagct atcagctgca tttctagcat ctacagcttc
      301 tttgcgtttt ttgtcttctt ctttgtgaag ttcagcatct tttaccatgt tattaatctc
      361 ttcctcgcta agtccacttg aacctgtgat tttgatctct tgtgctttac ctgttgcttt
      421 atcttttgca gaaacagtta aaataccatt tgcatcgata tcaaaagtaa cttcgatttg
      481 tggcataccg cgtggtgctg gtggaattcc ttcaagatta aaatttccta aagatttatt
      541 atcacgacta aattctcttt ccccttgtaa aacattgata gttacagcac tttgattgtc
      601 ttctgcagtt gagaaaactt gctctttttt ggttggtata gttgtacctt tttcgatgat
      661 tttagtcatc acaccgccta aagtttcgat acctaaagaa agtggagtta catcaagtaa
      721 aagtacatct tttacatcac cttttataac tgcaccttga atcgccgcac cgatagccac
      781 aacttcatca ggatttacag atttgttaag ttcttttcca aaagcttttt taacctcttc
      841 ttgcactaaa ggaacacgag tagaaccccc taccataacg atttctttaa tttcattttt
      901 atcaagccct gcatctttta ccacttcatt gatcttagtg atagtttcag ctactaaaga
      961 atcaatcata ccttcgaatt tagctctagt aagtttttta accaaatgtt ttggcccact
     1021 tgcatctgct gtgataaatg gtaaattaat ttcagtttca ttagctgaac ttaattcttt
     1081 tttagcattt tctgctgctt ctttcaagcg ttgcaaagcc ataacatcat ttttaagatc
     1141 tatgcctgtt tcatctttaa attcattagc tagaaaatct ataagtttat tatcaaaatc
     1201 atcaccacct aagaaagcat taccacctgt tgctaaaact tctactacat tatcccctgt
     1261 ttcaagtacg gtaacatcaa aggttccccc acctagatca taaaccacaa ttttttcact
     1321 atctttttta tcaagtccgt aagctagagc tgctgaagta ggctcattga taattcttaa
     1381 tacattaagt cctgctatcg ttcccgcttc ttttgtcgct tttctttgtg catcgttaaa
     1441 ataagcaggc acagtaatca ccgcatcagt aacactttca cccaaaaaag cttctgcatc
     1501 ttcttttaat ttcatcaaaa cttttgctga aatttcttgt ggggtgtaaa ttttacctgc
     1561 gatttctatt gcgcacgcac catttctttc agtgatgtgg taaggaagtc tatttttagc
     1621 ttctttagct gcatcttcat tgatcattaa acccataatt cttttgatag aataaatggt
     1681 tttttcaggg ttggttaccg cttggcgttt tgcactatcg cctactaaaa cttcgccttt
     1741 atctgtaaaa gctaccactg aaggagttgt gttttttcct tctttgtttg ggattacttt
     1801 actctcaccg cgttcataca cagcaacaca agaattggtt gttcctaaat ctatacctat
     1861 aactttactc attttttatc cttctattaa aatttatttt gctacactaa ctttggttgg
     1921 gcggatcacg cgatcggcta ttttataacc tttttgaagc acttgaacca cttcaccact
     1981 ttgatggttt tcactatcta catgaaacat tgcttcatgt aaattaggat caaactcttt
     2041 ttcatctttg ataagagcca ctccatgttt ttcaagtttc ttaagaaata aatctaaagt
     2101 attttgcact ccttctttga tttttaagct aatttcatct tggcattcga cattaacagc
     2161 tgcttctaaa gcatctaaaa catcaagcaa atcctttgca aagctttcat ttgcataagc
     2221 catagcactt agcttttctt tttccattct ttttttaata ttttcaaatt cagcgtttgc
     2281 acgcatatat ttgtctttta attcatcata gtctttttgc aatttgtttt gctcaacatc
     2341 ttcgatattt tgcaaattct catcttgcaa atgttcagaa ttttctgcgt tttcgttttc
     2401 aaattcttgc ttttgctcgc tcacgccgcc tcctttatgt attgtaatat ctttttataa
     2461 tccgtataaa cactacctgc taagataata tttacatctt cgcccaaaaa ctgcgcatcc
     2521 accttaagcc ccataaaacc ttctttaaat aaaggttcaa attcaagact ttctttaaaa
     2581 tgacggtgaa tttgacaatc taagagctta acaaaatcat cattttgata aatttgataa
     2641 gctctttctt cattgcttct atagcaaatc aaattttgtc ttaagctagc tattttttct
     2701 acaagatcta taaaatgaac tctcaaagct attttttcta tactagaaag atcaagtcct
     2761 ataagacttt gtaaaaaatt ccacgcttct ttttcatatt ttaaaacgag ctcttcttct
     2821 ttaaaatcaa gtactataaa cttagcattt agatcaagta cttctttaag tactaaactt
     2881 ctacctccat aaacaagaca ataaatttca aattctttac ttaactcttt caaaaagctt
     2941 tcgtttttga tatggatatt tttatcttgt tctttttccc aaaaactttg ccaataattt
     3001 tgcatcgtta aaatagtagg aattctacca ctacttatat gaagctgagt gatcaaaccc
     3061 tcatcgctaa gtcttttaag ataaacgcgt atagtcgaag caggtatgca aaggtttgaa
     3121 tttaattcat tagaaccaat aggtgcatta tccaaaagat aagtttggat aatagactct
     3181 aaaatcaaat cctttttatc tcgacttttc atcatgtttt cctttaaagc tagcactcta
     3241 ttttttgatt gctagatata ttatacaaca ttgagtgtta ttttgtcaag tataaatata
     3301 aaaaaatata cttaatttta tttagtctat ataactaaag ttttattagt tactttttta
     3361 taaggatagg atatatttca agattggtaa acagggtgat aattagataa gaaattttaa
     3421 atagattcga taatttaact tttttaaaag cacaagatgc tataaacaaa aaaccaaaga
     3481 agcctttaca agctctttgg cttttctatc aaagcttaaa aactaccatt aatggaaata
     3541 tatattcttc ttccttcttc tatacgattg taagtattga cccaagtagg agcaccgcta
     3601 ttttgataag attcccaacc atttgtaaag cttttgtcaa aaagattata aatagctgca
     3661 ttgatactcc attgcttatt gatatcataa cgcacaccca tagaagctaa aaagatatcc
     3721 ttataatact ctctattgat gttcgtatca cccatatagc gatctatttg ccattcgcct
     3781 tttatccaag gggtaatttt attatagaag ctgtattcag tttttaacat gatattgtgt
     3841 tttaaactat cctgttcagg tttacctatc acacttttat cttgtgcttc tttaacctca
     3901 ctatcaagat aagtataagc aaaatttaca tttaaattat caagagggct tatccctgct
     3961 ccaagctcta tgcctttata ttcgaccttg ccatggttga ttgccttaaa acatctatca
     4021 gcaccacaag taccaattcc tggaatcata ttgtctttat tatatctttg ggttgaaatt
     4081 ttatctttaa aatttgttaa aaaacctgtc gcagaaacat aaaacaaatc attattgtaa
     4141 atagctgcta tttcataatt taaagatgtc tcttctttta aatcaggatt tccatatata
     4201 ggaaatctac cttgaccact ataattataa gctccattta tcaaacgatt tgcataagga
     4261 gtcctaaaac ccgtagatac accgcctttt aaagtaagtt catcagtagg attataaact
     4321 agataagctc ttggcgaaat attatttcca aaaatttcat gatgattgta tcttgctcca
     4381 aaagtcaatc ttaagttatc ttttatgctg tactcatcct ctgcaaatat tgccaataaa
     4441 tactgatcaa aattggtcgg attagctatt ttatcttgca ttttttcaag cctatattca
     4501 ccacctgcgc ttaaaatatg actttgtccc aaaggaatga cagacttagt atctaagata
     4561 atatcttctg cgactatatc tctattttct cccaaaaacg gctgtgtagc ttgccctacg
     4621 acttcacggc catcattgct taccctattg tattgcaaac cagaagtgat agaaaagttt
     4681 tcataaacac cctcatggct taaataagtt acaaatttat caacttccat aatatctgca
     4741 taaccacccg ttaagctacc tggtgttcta cctggacttg taatagttcc taattgacct
     4801 tgtttattat cgtaatgatt tcttgaaaaa tctatatcaa atataaaggt attataatta
     4861 ttagccaaat aactgactct tgttcctata ttaaaattat ttgcttttgt gggactttga
     4921 gcttgatctc cttgaactct ttgtccactt ccatttgtaa attcaacatt agattgctgt
     4981 ctgtaaaatt ctctaattcg aagtgttaga cccaatttgt cattcatcaa aggaccacta
     5041 gaataaatac tcgttccata agtattaccc caatctttat tttcatttaa aagagcatcc
     5101 aaacttacag aagtttccca tttatcactt acttttttgg taatgatatt taccaccccg
     5161 cctaaagctt cagagccata taaagtactc ataggacctt ttataacttc tattctttct
     5221 atgctagaaa ttggaggtaa taaagaattt gaaatttcat taaagccatt aggaccaact
     5281 tccccgccaa taccctgacg gcgtccatca atcaaaacca aagtatatcc cgtaatacct
     5341 ctcatggtaa tattataaga acctgttttt cccttgctag catataaatc aacgcctggg
     5401 atatctgcga tagcctctgc aacatctcta taaggcttac tttgtaattc ttttttactg
     5461 ataacattga tagtagcagg agcttcttta atatcttgag taaagccaga agcactaacg
     5521 attgagctat ctagttctac attttgcgat atggcattgg agcttaagag accaatggcg
     5581 caaactgata gacatatttt tttcattttt ctccttttgt taaatattga tttagaaatc
     5641 aaaatattat gataataatt attaatttaa gataaatttt gtatcaattg tgataattag
     5701 tattaattaa aaatttattt tttcttgcta taattcttaa aaatataagt ttttttagag
     5761 aagtaaatag caaaaattaa atatctttta gatacaagct tgattatttg attgttattt
     5821 ttctctgtga aatttgtttc aaaatttatc tttttaaaca atttaccata gaatgtgttt
     5881 aagaaataaa gatatttaaa tcaaaaaata aaatcataac ggagtaaaag atgaaaacat
     5941 ttataagcaa tcataaaaac caatcttctt ttatcacttt atttgttttt acacctttat
     6001 tttttgtttt tctttattct aaagattttt tacacataca acccaatgaa actattaaag
     6061 aaaataaatt taatatggca atcaaacatt ttgtacaaaa ttcctccgat atgaaaccga
     6121 cacaacccac acaaactata caagagcctt cgaatgtgca acccaaagaa cctgtgcaag
     6181 aaataaaaaa aataaaaccg agaaaagaaa aacctatcgc taaacctaaa aaaataatcc
     6241 ctccagcaaa tgcaaaggca ataagtcaac ccaaaaaaga tacaaacatg cagcaaccaa
     6301 tcatgcagca acaaactcca caagccagct cttaccaaag cgtatcttta actagcaata
     6361 gtgaattttt aaaagaaata aaatcagcaa tcgatgaagc cctaatctac cctagacaag
     6421 ctagaaaaat gcgtatgagt ggggaggttc ttgtagaatt tacctggaca aaagaaaaga
     6481 aattagaaaa tttaaaaata cttaaacctt caaaatatga ttttctaaat aaaagtgctt
     6541 tagaaactat acgcatagct tctaaaaaat ttccacaata tgaaaaaact tttcatataa
     6601 aaataccatt ggtatataaa ttaagctaaa tctttcacaa tatactctat ttttttgcta
     6661 acgcttagaa gtagaagctt cctagctaaa gctaactagt attagctaat tcgaaaggct
     6721 ttgagtttat agtcctcaag gctaattcct aacccaaacg actttaatcc acgctttaag
     6781 atattatttg cagcattaat atctctatgt aaagtgttgc cacatttttc acaaagatac
     6841 actctatctt taaacataag attttttttg atatttccac atacactaca agttttgctt
     6901 gtatattgtg gattgacttt tataaagaat ttaccattat gctttgcttt atactctaga
     6961 tattgagaga attgatagaa tgaaatatta agaatagatt tatttaaacc acttttagct
     7021 tttatattct ttaatttagc tcttttagac atattcttaa tttgcaaatc ttcgactgct
     7081 agcaagtcaa attcttgtat gagttttgaa gttatcttgt gataactatc ctttttgata
     7141 tttgaacttt tttcatagat tttatttaat tttaattgtg tttttttgaa attatggctt
     7201 aactttgttt tctccttttt tgtttttaat attctcctac tttgttttct ttgcaatctt
     7261 ttaaatgcta aatcatattc agctctacta agtagctttg agttagtagc tattaactct
     7321 ccactgctta aggtaatctc attgatattt aaatcaatgt caactgcttt tttaatatca
     7381 aaatctttgc tagatattaa agaaatattt gattcatcat aaatgatact aaaagctaaa
     7441 tagtatttat tgtgattttt gataatagtg atttgattaa acttataagt atttggtaaa
     7501 tctctgtgat aacgcatttt aaaaaatgta ttcataagtc taaatatctt aaacttagta
     7561 gtatcactat ctttgatttt gtaggcttga ttattccaat taaagctttg ctttgcaaat
     7621 ttagagtttt taaatttggg aaagcctttg tttttatctc taattgcttg ctctaaggca
     7681 cgagaagatt aatccttgct tgttgggtta caacactttt atagcttaat tctcttgctt
     7741 ttataaggct agttttattg attatctatc ttacttgcct ttaaataact cctatctttt
     7801 ttatctaaat tcttattttt atcccactgc tcttgctgta aatttaaaca aatattatag
     7861 gcttaatata gatgaaacat tgatgattaa taagcttttg ttgttctttg tttaggtaga
     7921 attctatatt taaaaccttt ggttatttgc attgctttgt tccattaggg ctttttttct
     7981 ttttggttat atattttttt agggtaatta tcttctatgc cttgattttc tgcatatttt
     8041 ttaagagttt ctagcattat tccgcatagg tattctataa aaaattactg attatgtcaa
     8101 ataacctaac tagagccgta caactaacac tgtaagcaat tcatctccca cttaagaagt
     8161 gagagtttta ttgaataaaa aagataaatt taaagcaaat aatctttttt tagacaacac
     8221 taaacccttg catgtattta cagcaatatt tatttcatca taaacaaccc ccaaccataa
     8281 aacctcaata aacactataa aataaacttg agtgattaaa aatccaaccc aattattgaa
     8341 caaacccaag ctacataata aaatataaac tagacata
//
LOCUS       DAQUWA010000075         8008 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.075, whole genome shotgun sequence.
ACCESSION   DAQUWA010000075 DAQUWA010000000
VERSION     DAQUWA010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8008
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.075"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(38..643)
                     /locus_tag="R8X70_001562"
     CDS             complement(38..643)
                     /locus_tag="R8X70_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEF2929322.1"
                     /translation="MEEFIIRIWNEHVETWGYLILFCWSILEGELGLIFAGLAAHDGK
                     MHVVLAIFIAGLGGFVGDQIYFYIGRYNKRYIQKKLRSQRRKFAVAHLLLQRFGWPII
                     FIQRYMYGFRTVIPMSIGITRYSAKKFAIINLLSAWVWAAITILLAWHFGNLIQNFLT
                     WAKNHWYLAAIMIICFLSLLVFTFKQIEKAILKEKRKKNDI"
     gene            complement(743..1291)
                     /gene="apt"
                     /locus_tag="R8X70_001563"
     CDS             complement(743..1291)
                     /gene="apt"
                     /locus_tag="R8X70_001563"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEF2929323.1"
                     /translation="MTKLTQNEQQFLSESIRVIPNFPKEGIIFRDITTLLNNQKALSF
                     LLDHLSKRYQTMNLDFIAGTESRGFIFAAMICAKLNLPFVPIRKPNKLPSNTYSCEYE
                     LEYGTDRVEIHQDAFRNIKNAKILLVDDLIATGGTALASFELIKKAGGECIEACFLMN
                     LKNLGGEEKLQKHCSVYSVLEF"
     gene            complement(1288..1620)
                     /locus_tag="R8X70_001564"
     CDS             complement(1288..1620)
                     /locus_tag="R8X70_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929324.1"
                     /translation="MFANWFILTALICATIYLVVMLFYYKTLLNKEKTSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            complement(1620..2057)
                     /gene="rpiB"
                     /locus_tag="R8X70_001565"
     CDS             complement(1620..2057)
                     /gene="rpiB"
                     /locus_tag="R8X70_001565"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEF2929325.1"
                     /translation="MLRKKIYIASDHAGFMLKEKICTFLKEKQIPFDDLGTNDPTSCD
                     YPDYAHLLASKIDEQSFGILICGSGIGISIAANRHKNIRCALCNESLSAKLARKHNDA
                     NVLAFGGRLIGIDAAIDMIENFIQTPFDQGRHVKRIQKIEVDC"
     gene            2226..2780
                     /locus_tag="R8X70_001566"
     CDS             2226..2780
                     /locus_tag="R8X70_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEF2929326.1"
                     /translation="MKLLLIGSSTGGPNQLKFLLKDVDIKNTCVVIAQHMSASFIPSF
                     VNQFNKEALSEVSLLNDKEVLANKIYICQKNTILSGNLNLMANWKEVVTSFKPNVDLL
                     FHSAVPLVKTNKILAVILTGMGDDGAKGLFELYKVGVKCLCENEADSIVYGMPKKAKD
                     INPKLRPMSLKEIKQEILNFINEE"
     gene            2793..3581
                     /locus_tag="R8X70_001567"
     CDS             2793..3581
                     /locus_tag="R8X70_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEF2929327.1"
                     /translation="MEEKINPSELELNEFIKIINEISGIDLNEKRNILVLKLSKFVSS
                     TGLKTFAEFLSKLQINRQLRQDTLDFVTIGETYFLRELSQLKEIIFYAKSLEKTVNIL
                     SAPCSSGEEVYSMAILGAQNFLKDMMILGIDINSNVIEKAKVGKYQGRTLQRLSESEK
                     RRFFTDIGEQTFSINKSELCTCRFELCNVFEDKFLRLGKFDIIVSRNMMIYFDYDSRI
                     KLMERFYQILADNGRLYVGNADLIPETTFFKKVFSPRGVYYEKI"
     gene            3744..4472
                     /locus_tag="R8X70_001568"
     CDS             3744..4472
                     /locus_tag="R8X70_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEF2929328.1"
                     /translation="MIELRNVNKYYETHHVLKNINLCVKEGEKLVIIGPSGSGKSTTI
                     RCMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPM
                     KLQKKLRQEAEETAYQYLKVVGLVDKANVYPATLSGGQQQRVAIARALCTKKPYILFD
                     EPTSALDPETIQEVLDVMKEISTQRNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEEN
                     APSEFFSNPKTERARLFLGKILKN"
     gene            4497..5276
                     /gene="peb1A"
                     /locus_tag="R8X70_001569"
     CDS             4497..5276
                     /gene="peb1A"
                     /locus_tag="R8X70_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HEF2929329.1"
                     /translation="MVFRNSLLKLAALALGACMAFTSANAAEGKLEAIKAKGELVIGV
                     KNDVPHYALLDQATGEIKGFEVDVAKMLAKSILGDENKVKLIAVNAKTRGPLLDNGSV
                     DAVIATFTITPERKRVYNFSEPYYQDAVGLLVLKEKNYKSLADMNGATIGVAQAATTK
                     KVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDAFSVDKSILLGYKDENNEILPDS
                     FDPQSYGIVTKKDDVNFSNYVNDFVKQNKTEIDALAKKWGL"
     gene            5278..6030
                     /locus_tag="R8X70_001570"
     CDS             5278..6030
                     /locus_tag="R8X70_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEF2929330.1"
                     /translation="MNESVGFVDKLRQLLSSWGLYDESSTNPFAIWKFLDALDNGDAF
                     ISGFIYTLEVSILALLIAIVFGTIGGVMATSKIKILRAYTRVYVELFQNIPLVIQIFF
                     LYFALPGLGIHLDIFTIGVLGIGAYHGAYVSEVVRSGILSVPRGQFEASASQGFTYVQ
                     QMRYIIVPQTIKIILPPMTNQMVNLIKNTSVLLIIGGAELMHSADSYAADYGNYAPAY
                     IFAAILYFIICYPLAYFAKVYEDKLKKAHLTR"
     gene            6041..6700
                     /locus_tag="R8X70_001571"
     CDS             6041..6700
                     /locus_tag="R8X70_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEF2929331.1"
                     /translation="MENVFNAQNIEFLMQGLVLTLKIALATCIISIIFGTFLAITKNY
                     GDRFSRLLATCYIDIFRNTPLLLWMLAACFVLPSFFPQMPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFSKFFTLFYIILPQTFRKVVPSLLSQIVTTVKDTAY
                     LAGLQIAELTYNSKNILARLTSFDEILATIGFVAVIYFAICFSLSMLVRYYAKKTAYV
                     S"
     gene            6801..7730
                     /locus_tag="R8X70_001572"
     CDS             6801..7730
                     /locus_tag="R8X70_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEF2929332.1"
                     /translation="MRGYKIFSGSANVEFAKQISKYLSLPLSDAGVKRFSDGEISVQI
                     DESVRGKDVFIIQSTCVPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIEAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKTKHF
                     KNAIVGSPDIGGVARARSVAKNLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTIVKAAEALKNKGAKSVMACCTHAVLSGKAYERIASGALDELVVTDTIPLR
                     EQLPNIKVLSVAPVFAEVIRRVYHNESVNSLFI"
BASE COUNT         2781 a         1110 c         1334 g         2783 t
ORIGIN      
        1 atctgctttt ataccatgaa tttttttatc acttaattca aatatcattt tttttccttt
       61 tttctttaag tatagctttt tcaatttgtt taaaggtgaa aacaagtaaa gataaaaaac
      121 atattatcat aatagcagct aaataccaat gatttttagc ccaggttaaa aaattctgga
      181 ttaaattacc aaaatgccaa gctaaaagta tggtaatagc agcccaaacc caagcgctaa
      241 gaagattgat aatggcaaat tttttagcac tataacgcgt aatacctatg ctcataggga
      301 ttacagttct aaaaccatac atatagcgtt gtataaaaat aataggccaa ccaaaacgct
      361 gtaaaagtaa gtgcgctacg gcgaatttac gcctttgcga acggagtttc ttttgaatat
      421 agcgtttgtt atatcttcct atataaaaat aaatttgatc cccaacaaag ccacccaagc
      481 cagctataaa tatagctaat actacatgca tttttccatc atgggctgca agtccagcaa
      541 aaataagtcc aagctcaccc tctaaaatac tccagcaaaa aagtatcaag tagccccaag
      601 tttcaacatg ttcattccaa attcttataa taaattcttc caaggagaaa tcatttttaa
      661 ccaaaccatg aatcacataa attattagag caattaaaac gataaagata aaaaatttaa
      721 accattttct catcgcaccc tcctaaaatt ctaaaacact atatacagaa caatgctttt
      781 gtaatttttc ttcaccgcct aagtttttca aattcattaa aaaacaagcc tcgatacatt
      841 ctcctcctgc ttttttaata agttcaaaag aggcaagtgc tgtcccacct gtagctataa
      901 gatcatctac aagcaaaatt tttgcatttt ttatatttct aaatgcatct tgatgaattt
      961 ctactctatc tgtcccatac tcaagttcat actcgcaaga ataggtattt gatggaagtt
     1021 tattgggttt gcgtatagga acaaaaggta aatttagctt agcacaaatc attgccgcaa
     1081 aaataaaacc tctgctttca gttcctgcta taaaatctaa attcatagtt tgataacgct
     1141 tacttaaatg atccagtaaa aaagataagg ctttttgatt gttaagtaga gttgtaatat
     1201 ctcgaaagat aataccttct tttggaaaat ttggaataac gcgtatgctt tctgataaaa
     1261 attgctgttc gttttgtgta agttttgtca taataatgcc tcgatttttg cttctagctc
     1321 tttaattctt tgtcttagtt tatcattttc taaacggtat tgagaatttc ttgttcttag
     1381 agaagttaaa tccgctttta ttttattgag ctcttcggtt aaaatatcga tattcccaag
     1441 actgcgttga agttgaattt gtagttttct aatgactatt tcagtatcat caagattgtt
     1501 ttttataaaa tcttttgaag ttttttcttt attaagcagg gttttataat aaaacaacat
     1561 aacaactaga taaatagtag cacaaataag tgcagttaaa ataaaccaat ttgcaaacat
     1621 taacaatcta cctcaatttt ttgaattctt tttacatgtc taccttgatc aaaaggggtt
     1681 tgaataaaat tttctatcat atcgatagct gcatcaatgc ctattaatct acctccaaaa
     1741 gctaaaacat ttgcatcatt gtgttttcta gcaagtttag cactaaggct ttcattacat
     1801 aaggcacagc gaatgttttt atgacgatta gcagcgatgg aaattcctat ccctgaacca
     1861 caaattaaaa ttccaaagct ttgttcatct attttagaag ctaacaaatg tgcataatct
     1921 ggataatcac aactagtagg atcatttgtc ccaagatcat caaaaggaat ttgcttttct
     1981 ttaagaaagg tacaaatttt ttctttaagc ataaaacccg catgatcgct agcaatataa
     2041 attttttttc taagcataaa aaatccaaaa tttaaaaatt aaagcatcta tattaacata
     2101 acaaatcata aaaaaagctt tttgttttca aaataaattt aaaactaagt tttatttttt
     2161 gtatatatgt tacaatatac attttaagaa ttttaatcca ttttaacaaa tagaaggaaa
     2221 attaaatgaa actcctattg ataggatcat ctaccggagg ccctaatcag ctgaagtttt
     2281 tattaaaaga tgtggatata aaaaatactt gcgtagttat agctcaacat atgagtgcaa
     2341 gttttatacc ttcttttgta aatcagttta ataaagaagc cttaagcgaa gtaagtcttt
     2401 taaacgacaa agaggttttg gcaaataaaa tttatatttg tcaaaaaaat actattttat
     2461 caggaaattt aaatcttatg gcaaactgga aagaagttgt cacaagcttt aaaccaaatg
     2521 tagatttgtt gtttcactca gctgtacctt tggtaaagac aaacaaaatt ttagctgtaa
     2581 tactaacagg catgggagat gatggggcta agggattgtt tgaattgtat aaagtaggag
     2641 ttaaatgttt gtgtgaaaat gaggctgata gtattgtata tggtatgcca aaaaaagcaa
     2701 aagatataaa tccaaaacta aggcctatga gtttaaaaga aattaaacaa gaaattttaa
     2761 attttataaa tgaagaatga gggtttaaat ttatggaaga aaaaattaat cctagcgaat
     2821 tagagcttaa tgaatttatt aagattatta atgaaatcag cggtatagat ttaaatgaaa
     2881 aaagaaatat tttagtttta aaattatcaa aatttgtttc aagtacgggt ctaaaaacct
     2941 ttgctgaatt tttaagcaaa cttcaaataa atagacagct tagacaagac actttagatt
     3001 ttgttactat aggggaaaca tactttttaa gagaattgtc gcaattaaaa gaaattattt
     3061 tttatgctaa aagtcttgaa aaaacagtaa atattttaag tgctccttgt tctagtggcg
     3121 aagaggtgta ttctatggcg attttgggag ctcaaaattt ccttaaggat atgatgatct
     3181 taggaattga tataaattca aatgtcatcg aaaaagcaaa ggtgggtaaa tatcaaggta
     3241 gaactttaca gcgtttaagc gaaagtgaaa aaagaagatt tttcacagat attggagagc
     3301 aaacatttag cattaataaa agcgaacttt gtacatgtag atttgaatta tgtaatgttt
     3361 ttgaagataa atttttaaga ctgggtaaat ttgatattat tgtctctagg aacatgatga
     3421 tttattttga ctatgattct agaattaaat taatggagcg tttttatcaa attttagctg
     3481 ataacggtag gttgtatgtg ggcaatgccg atttgattcc tgaaaccaca ttttttaaga
     3541 aagttttttc acctcgaggt gtgtactatg aaaaaatttg attatatttt cttaaatttt
     3601 acaaaaagtt acactttttt atatcttcgc taaaataaag ttactatttt tagcttaaat
     3661 tttgattttg gtgctataat attgtcaata taataaaccc ttgttattat taatttttaa
     3721 gtttaatcaa aaaaggaaag attttgatag agttaagaaa tgtaaataaa tattatgaaa
     3781 cccatcatgt tcttaaaaat attaaccttt gtgttaaaga aggtgaaaaa cttgttatca
     3841 taggccctag cggaagtgga aaaagtacta ctattcgctg catgaatgga cttgaagagg
     3901 tgagttcggg tgaagttgtt gtaaataatc ttgttttaaa tcataaaaat aagattgaaa
     3961 tttgtaggaa atattgtgct atggtttttc aacatttcaa tctttatcct catatgactg
     4021 ttttgcaaaa tttaacttta gctcctatga aacttcaaaa aaaattacgc caagaagccg
     4081 aagaaacagc ctatcaatat cttaaggtgg ttggacttgt agacaaggca aatgtttatc
     4141 cagccacgct ttcaggtggt cagcaacaac gtgttgctat cgcaagagcg ctatgtacta
     4201 aaaaacctta tatcttgttt gatgaaccta cttcagcact tgatcctgag actatacaag
     4261 aagttttaga tgtaatgaaa gaaatttcta cacaaagaaa tacaactatg gttgtggtaa
     4321 ctcatgaaat gggttttgct aaagaagttg ccgatagaat tattttcatg gaagatggtg
     4381 ctattgtgga agaaaatgct cctagtgagt ttttttccaa tcctaaaact gaaagagcaa
     4441 gactcttttt aggaaaaatt cttaaaaatt aaaccaaatt ttaaaaggag agaacaatgg
     4501 tttttagaaa ttctttatta aaattagcag cacttgcttt aggagcttgt atggctttta
     4561 ctagtgcaaa tgcagctgaa ggaaaacttg aagctatcaa ggctaaagga gagttggtta
     4621 taggtgtaaa aaatgatgta ccacactatg ctttacttga tcaagctaca ggcgaaatta
     4681 aaggctttga agttgatgtt gctaaaatgc ttgctaagag tattttagga gatgaaaata
     4741 aagttaaact tatagcagta aatgctaaaa caagaggtcc attacttgat aatggtagcg
     4801 ttgatgcggt tatagcaact tttactatca ctccagagag aaaaagagtg tataattttt
     4861 cagagccgta ttatcaagat gctgtagggc ttttagtttt aaaagagaaa aattataaat
     4921 ctttagcaga tatgaatggt gctactatag gggtagctca agcagcaact actaaaaaag
     4981 ttatcaatac tgcggctaaa aaaataggtg ttaaagtaaa attcagcgaa tttcctgatt
     5041 atcctagcat aaaagcagct ttagatgcaa aaagaattga tgcgttttca gttgataaat
     5101 ctattttact aggttataaa gatgagaata atgaaatttt acctgatagt ttcgatcctc
     5161 aaagttatgg catagttaca aaaaaagatg atgtaaattt ttcaaattat gtcaatgatt
     5221 ttgtaaaaca aaacaaaact gaaatcgacg ctttagctaa aaaatggggt ttataaaatg
     5281 aatgagagtg taggctttgt ggataaatta aggcaactcc ttagttcttg gggtttgtat
     5341 gatgaaagta gtacaaatcc ttttgcaatt tggaaatttc tagacgcttt ggacaatgga
     5401 gatgctttta ttagcggttt tatttatact ttagaagtga gcattcttgc attacttata
     5461 gcgattgttt ttggaactat aggtggtgtg atggccacaa gtaaaattaa aatcctaaga
     5521 gcctacactc gagtgtatgt tgagcttttt caaaatattc ccttggtaat acaaattttc
     5581 tttttatatt ttgctttgcc tggcttagga attcatcttg atatttttac catcggtgtt
     5641 ttgggtatag gtgcttatca tggtgcttat gtaagtgagg tagttagaag tggaatttta
     5701 tctgttccta gaggacaatt cgaagcttca gcctctcaag gttttaccta tgtacaacaa
     5761 atgcgttata ttatagttcc acaaactata aaaattatcc tgccgcctat gacaaatcaa
     5821 atggtaaatt tgattaaaaa tacttctgta ttattgatta taggtggagc agagcttatg
     5881 cattctgcag atagttatgc tgctgactat ggaaattacg cacctgcata tatttttgcg
     5941 gcgattttat attttatcat ttgttatcct ttggcatatt ttgcaaaagt ttacgaagac
     6001 aagcttaaga aagctcattt aacaagataa ggggtttggt atggaaaatg tttttaatgc
     6061 tcaaaatatt gaatttttaa tgcaaggtct agtccttacc cttaaaattg ccttggcgac
     6121 ttgtattata tctatcattt ttggaacttt tttagctatt actaaaaatt atggagatag
     6181 attcagcagg ttattagcaa cttgttacat tgatatattt agaaatactc cattgctttt
     6241 atggatgctt gctgcttgtt ttgttttgcc atcatttttt ccacaaatgc cacaagcttt
     6301 ttggggaact ataggatttt cgctatacac aagttcagtt atggctgaga ttatacgtgg
     6361 tggtttaaat tctattccaa aaggacaatt tgaagcagct tattctcaag gatttagtaa
     6421 attttttact cttttttata ttattttacc tcaaactttt agaaaggttg ttccgtcttt
     6481 gctttctcaa attgttacca ctgtaaaaga tacggcctat ttggcgggtt tacaaatagc
     6541 agaactgact tataattcta aaaatatttt ggctagactt acgagttttg atgaaatttt
     6601 agctactata ggttttgttg ctgtgattta ttttgctata tgcttttcat tatccatgct
     6661 tgtaagatat tatgctaaaa aaaccgctta tgtttcttag aaaatatgta ttttaattaa
     6721 aagagaatgg aatttacagc attttttaaa ttttatttta ttaaaatctt attttaatat
     6781 tatttagtaa aaggtctttt atgcgcggtt ataaaatttt ttcaggttcg gctaatgtag
     6841 aatttgcaaa acagatttct aaatatcttt ctttgccttt aagtgatgct ggagtaaagc
     6901 gttttagcga tggagaaatt agcgttcaaa ttgatgaaag cgtacgtggt aaagatgttt
     6961 tcattatcca aagcacctgt gtacctacca atgataattt aatggagctt ttaatcttaa
     7021 cagatgcttt gcgacgctca agtgcaaatt ctattacagc tattattcct tattttggtt
     7081 atgcaagaca agatagaaaa gcaaatccaa gggtacctat tactgctaaa cttgttgcca
     7141 atttaatcga agcagcaggg attgatcgtg tggctactat cgatctacac gcggggcaaa
     7201 ttcaaggttt ttttgatata cctgttgata atctttatgg aagtatagta tttaatgatt
     7261 atatcaaaac caagcatttt aaaaatgcaa ttgttggaag tcctgatata gggggtgtag
     7321 caagagctag aagtgtggct aaaaatttag gacttgatat agtgatagta gataaaagac
     7381 gcgaaaaagc taatgagagc gaagttatga atattatcgg agatgttaaa gataaagagg
     7441 tgattttagt cgatgatatt attgatactg caggtactat tgtaaaggct gctgaagctt
     7501 taaaaaacaa aggtgcaaaa tccgttatgg cttgttgtac tcacgcggtt ttaagtggta
     7561 aagcttatga aagaattgct tcaggggcgc tcgatgagct tgtagttact gataccattc
     7621 ctttaagaga gcaattgcct aatataaaag ttttaagcgt agctcctgta tttgctgaag
     7681 taatacgccg cgtttaccac aatgaaagtg taaattctct ttttatttaa ttttctatat
     7741 ttttttaaat atcttatatt aatataaaat aaatcagaac tatctctttg atagttctat
     7801 gattttttta cttttactaa tgacaaaaaa tatttgatag tgcatcttta aatataataa
     7861 cgacttaaaa aataaaagca aacttttaac aaaataaagc aacattctat aaatattttt
     7921 aactttaata aaacttgtct taaaaatagt cataaaaaat aatacaagat tgcatgttta
     7981 tttttttgaa aatgtcactt aaagaaac
//
LOCUS       DAQUWA010000076         7873 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.076, whole genome shotgun sequence.
ACCESSION   DAQUWA010000076 DAQUWA010000000
VERSION     DAQUWA010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7873)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7873)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7873
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.076"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            15..737
                     /locus_tag="R8X70_001573"
     CDS             15..737
                     /locus_tag="R8X70_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory protein"
                     /protein_id="HEF2929333.1"
                     /translation="MNDLVYSLNGGLVTDQNKISTISKVDINSIQRLIRNYKQDLECF
                     GELGFELQKIAKTNKKIYYLNEQQATLLLTYMKNSESVRNAKKVLVFAFYQMKEKLRS
                     LEQEQEKARFKSLSDENLRLNSLNHHQKIGYKSQLAQQKEKYENKIKALQYDLEKKKE
                     LSFKRKLSKEELLELRKILARDYGMICIKEWEFEFLAEKIALESTKMTTWDAVVKKLK
                     QNLDYWQNYEEYEEKWRKILRR"
     gene            741..1475
                     /locus_tag="R8X70_001574"
     CDS             741..1475
                     /locus_tag="R8X70_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929334.1"
                     /translation="MSNEVVLKEENKLEINFNPYELALVKGDLSKLSDVERASYVKNL
                     CESLGLNMLTKPFEYIVLNGKLTLYANKSATDQLRQIRKVSITKTEVAQVGDIYMVTA
                     YAATPDGRTDCDTGALNIKNLGGDNLANAIMKAITKAKRRVTLSICGLGMLDESELET
                     IKEKRFLNPNEDLKVWGSDEKAIENKAKEIKALGAELRKFMSDNGLNTEEQNNFIKKH
                     SLFTSEKIREVLSNKDEFLTQLKGEL"
     gene            1475..2170
                     /locus_tag="R8X70_001575"
     CDS             1475..2170
                     /locus_tag="R8X70_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929335.1"
                     /translation="MLPAFKASFEVANYSPSVEYLSEGGLYSGVFRKAFLYDKLASDG
                     SNNTFICFEFLTRKEQKLAIFNLFVAKNNDFSQINENGEKENYLGFRQLNAIMKFFGI
                     DELDFSEKGNENVFGVQTEVIYLNSLVNKLLVLGFGTKEYLSKNGEIANTIFLDKIFN
                     EKMQNIDEFQNNKEPLSIKSFKARHKSSNNYNNKSFIPKENQSYNPYGNEVKNSSNEK
                     YIEIGDDDESLPF"
     gene            2151..2429
                     /locus_tag="R8X70_001576"
     CDS             2151..2429
                     /locus_tag="R8X70_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929336.1"
                     /translation="MKVCRSNYLEIVKIVPFSERRSCFCRFLRSNGIAIEKINYKNHI
                     SKKELRKAYKIYKSKPSGRNYFHEEKLIVKAFEDVEKFLRSENETKRL"
     gene            2410..2850
                     /locus_tag="R8X70_001577"
     CDS             2410..2850
                     /locus_tag="R8X70_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929337.1"
                     /translation="MKLKDFDFRIWDNTEKRYLNEIELHKYDKSPVEAGTTFTETDRI
                     NEVEFVKNKNDLEIELFTGYYDYKGNKIYIGDIIECLVFINEKNSEIFYEIICFDMEL
                     GLCSKLSNGDGGYLFDLRRDKNNKTIEDVYVVGNIHENKELLKG"
     gene            2914..3207
                     /locus_tag="R8X70_001578"
     CDS             2914..3207
                     /locus_tag="R8X70_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929338.1"
                     /translation="MENFKAFKLISKRIIKTLLNDFPNQSILFSDDFNKDCKEYKIDF
                     SSCIHFLKECKVLKYDKENNDDFSGVLISPKAYLYFSKNDLNDIDDLIEFCMR"
     gene            3217..3450
                     /locus_tag="R8X70_001579"
     CDS             3217..3450
                     /locus_tag="R8X70_001579"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929339.1"
                     /translation="MQEETITYARGRLTELKDKKDELQRLIKDSKNLAIKNIQNDDLK
                     GARLYIDKLELYFDELLKTNTDLNLLCNKWGFK"
     gene            3447..3824
                     /locus_tag="R8X70_001580"
     CDS             3447..3824
                     /locus_tag="R8X70_001580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929340.1"
                     /translation="MSENIELFESYTAKTLGELYSTFPIPSDFNFFDFIPKLEYEEFL
                     THQLNAYHTINYLKNNHFLDFESMDLESGKVKKAILKPKALELLKQDGLGVQLRKALS
                     TGRDELIRSIVNRALEMSLKFMF"
     gene            3838..4077
                     /locus_tag="R8X70_001581"
     CDS             3838..4077
                     /locus_tag="R8X70_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEF2929341.1"
                     /translation="MTAQEIKEFCKEQGLTYKQLGELIGMTEPSVKTALSVDKISNQI
                     EASINLLKKIKEQEQELKEFRALKEILINLTKSDK"
     gene            4548..5234
                     /locus_tag="R8X70_001582"
     CDS             4548..5234
                     /locus_tag="R8X70_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HEF2929342.1"
                     /translation="MKNQVFINSLDLAKVFKKRHDNIIQTIENLPQDEFKTLNFEISS
                     SIRKNGLFEKDTKFYKLTRDAFSLLVMGFTGEKAYKWKVEFIKAFNEMEKRLKNLEQE
                     KMQKLAFHQSLGYKSQLKQQKEKYENKIKALQYDLEKKKELSFKRKLSKEELLELRKI
                     LAKDYDIVCFKEWEYMLFAESVSGKNYKLEKENDFCIYKSIKDSFNSKLDYYKNYEEY
                     EEKWKKILRR"
     gene            5236..5778
                     /locus_tag="R8X70_001583"
     CDS             5236..5778
                     /locus_tag="R8X70_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEF2929343.1"
                     /translation="MGILKRLDETIIIENDRKSEKELVEYCILEGISLNNANLENINL
                     SGLDFDNVFINGASFKNTNLSNISSKNASFIDCDFSGVRLYGCNLLDTEFENCIFENV
                     DFRDCIGDMKNIFTVAIDTYVMNFSKTHLSLGCQIKTIREWKTTHIDDIEDEEQKWLW
                     GYYKDTIFEIIDKRLGVEND"
     gene            5771..6010
                     /locus_tag="R8X70_001584"
     CDS             5771..6010
                     /locus_tag="R8X70_001584"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEF2929344.1"
                     /translation="MIRLDIGDYYTRKEVANLLKVKEPIVHKYAKQGKFREFKQHRNC
                     SGLYPKQDIENFIKKYFGLVDLDQQSHRDNLPTTA"
     gene            complement(5937..7136)
                     /locus_tag="R8X70_001585"
     CDS             complement(5937..7136)
                     /locus_tag="R8X70_001585"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012798.1,HMM:NF024750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEF2929345.1"
                     /translation="MLNDTKIKALKAKDKKYYIADFDNLLLCIYPSGKKTFIFNYKCP
                     KTLRYKRITLGEYPALNLANARKQRDNLKVNLAENDSIREKYEITFKELALEKMDLKK
                     LELSEKTYKSYMSYLQRFAFGIYGEIILDKLQIKDILKSFEKFRKENIREGADKFFTL
                     LNEIFRHGVIKEYIKSNPMANLNRKELLINKASKNHATLLETKEIKALVDNIIDYKGY
                     ISVKIAAMFSLLTAQRSFSIRSAKWEDIDLENGIWYIPQEDMKMKRAHTIPLNSQCVY
                     MLKKYKEMSINTGYLFYSLRSKSEIISDNTIRSMFRRMGYSNDDFTPHGFRAMFSTLA
                     YENRNKHQMSSDIIELCLAHVEKNKIKSAYNHALNLKEKAILMQWWGDYLDEIADLNQ
                     QVRNIFL"
     gene            complement(7335..7420)
                     /locus_tag="R8X70_001586"
     tRNA            complement(7335..7420)
                     /locus_tag="R8X70_001586"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7384..7386),aa:Leu,seq:gag)
     gene            complement(7477..7815)
                     /locus_tag="R8X70_001587"
     CDS             complement(7477..7815)
                     /locus_tag="R8X70_001587"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEF2929346.1"
                     /translation="MKKIFFLFLALAATAFAAEANAPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVFA"
BASE COUNT         3126 a          954 c         1272 g         2521 t
ORIGIN      
        1 aaaaggatta tattatgaat gatttagttt attctttaaa tggcggttta gttacagacc
       61 aaaataaaat ttctacaata tctaaagtag atataaattc catacaaaga cttataagaa
      121 attacaagca agatttagaa tgttttgggg aactaggctt tgaacttcaa aaaatagcaa
      181 agactaacaa aaagatttac tatctgaacg aacagcaagc aacgctactt ttaacttata
      241 tgaaaaatag cgaaagtgtt agaaatgcta aaaaagtttt agtttttgct ttttatcaaa
      301 tgaaagaaaa gcttagaagt ctagaacaag aacaagaaaa agctagattt aaaagcttaa
      361 gcgatgaaaa tctaagacta aattctttaa atcatcatca aaaaatcggc tataaatcac
      421 aattagcaca gcaaaaggaa aaatatgaaa acaaaatcaa agcattgcaa tacgacttag
      481 aaaagaaaaa ggagttgagt tttaaaagaa aacttagcaa ggaagaatta ctagagctta
      541 gaaaaatact agcccgtgat tatggaatga tttgcataaa agaatgggaa tttgaatttt
      601 tagctgaaaa aatagcatta gaaagtacaa aaatgacaac ttgggatgct gttgttaaga
      661 agctaaaaca aaatcttgat tattggcaaa attatgaaga atacgaagaa aaatggagaa
      721 aaatattaag gagatgaaaa atgagtaatg aagttgtatt aaaagaagaa aataaattag
      781 aaataaattt taatccttat gagttggctt tggtaaaagg tgatttatca aaactgagtg
      841 atgtagaacg agcgagttat gttaaaaatc tttgtgaaag tttaggctta aacatgctta
      901 caaagccttt tgaatacata gtattaaatg gcaaacttac tttatatgca aataaatcag
      961 caacagatca gctaagacaa ataagaaaag taagtattac aaaaacagaa gtggcacaag
     1021 ttggcgatat ttatatggtt acagcctacg cagcaacacc agatggaaga acggattgcg
     1081 atacaggtgc tttaaatatt aaaaatttag gtggcgataa tttagcaaac gcaataatga
     1141 aagctatcac aaaagcaaaa aggcgtgtaa ccttaagtat ttgcggactt ggaatgcttg
     1201 atgagagtga attagaaaca ataaaggaaa agcgattttt aaatccaaat gaagatttaa
     1261 aagtttgggg tagtgatgaa aaagctatag aaaataaagc aaaagagata aaagctttag
     1321 gtgctgaact tagaaaattt atgagtgata atggtttaaa cactgaggag caaaacaatt
     1381 ttataaaaaa acattcttta tttacaagtg aaaaaatacg agaagttcta agtaataaag
     1441 atgaattttt aacacaatta aaaggagaat tataatgtta ccagcattta aggcaagttt
     1501 tgaagtggca aattattcgc caagcgtaga gtatttaagt gaaggtgggc tttatagcgg
     1561 agttttccgc aaagcctttt tatatgataa attggcaagc gatggaagca ataatacttt
     1621 tatttgtttt gaatttttaa ccagaaaaga gcaaaaacta gctattttta atctttttgt
     1681 agctaaaaat aacgatttta gccagatcaa tgaaaatggc gaaaaagaaa attatttagg
     1741 atttagacaa ttaaacgcta ttatgaaatt ctttggaatt gatgaacttg attttagcga
     1801 aaagggaaat gagaatgttt ttggagtgca gactgaagtt atttatctca attctttagt
     1861 taataaactt ttagttttag gttttggaac aaaagaatat ttaagtaaaa atggagaaat
     1921 tgctaacaca atctttcttg ataaaatttt taatgaaaaa atgcaaaaca tagatgagtt
     1981 tcaaaataat aaagagcctt tatctataaa atcttttaaa gcaaggcata aatcttcaaa
     2041 taactacaat aataaatcat ttattccaaa agaaaatcaa agctataatc cttatggtaa
     2101 tgaagtcaaa aattcaagca atgaaaaata tatagaaata ggagatgatg atgaaagttt
     2161 gccgttctaa ttatcttgaa attgtaaaaa tcgttccatt tagcgagagg agaagttgct
     2221 tttgtcgttt tttaagaagc aatgggattg caattgaaaa aataaattat aaaaatcaca
     2281 taagtaaaaa agaactcaga aaggcttata aaatttacaa aagtaagcca agcggaagaa
     2341 attactttca tgaagaaaag cttattgtta aagcttttga agatgttgaa aaatttttaa
     2401 ggagtgaaaa tgaaactaaa agactttgat tttagaattt gggataatac tgaaaagaga
     2461 tatcttaatg aaatagaact tcataaatat gacaaatctc ctgtagaagc aggaaccaca
     2521 tttactgaaa ctgacagaat taatgaagta gagtttgtaa agaataagaa tgatttagag
     2581 atagagttat ttacaggcta ctatgattac aaaggtaata aaatctatat aggagatatt
     2641 atagaatgct tagtatttat taatgaaaaa aattcagaaa tattttatga aattatttgt
     2701 tttgatatgg agttgggatt gtgttctaaa ttatctaatg gagatggtgg gtacttattt
     2761 gaccttcgta gagataaaaa taataaaaca attgaagatg tatatgtcgt aggcaatata
     2821 cacgaaaata aagaattatt gaaaggatga agatgcagaa agaagtctat ttgcttaagt
     2881 aaaattttga taaaataaaa taaaggagaa ttaatggaaa acttcaaagc ttttaagctt
     2941 atttcaaaac gtattataaa aacactttta aatgattttc caaatcaaag catacttttt
     3001 tcagatgatt ttaacaaaga ttgtaaagaa tataaaatag actttagctc ttgtattcat
     3061 tttctaaaag aatgcaaagt tttaaaatac gataaagaaa ataatgacga tttttcagga
     3121 gttttaatca gtcctaaagc ttatttatac ttttctaaaa atgatttaaa tgatattgat
     3181 gatttaatcg aattttgtat gagataaagg attaaaatgc aagaagaaac aattacttac
     3241 gcaagaggtc gtttaactga gcttaaagat aaaaaagatg agcttcaaag acttatcaaa
     3301 gatagtaaaa atctagcaat taaaaatata caaaatgatg atttaaaagg tgctagactt
     3361 tatattgata aactagagct ttattttgat gaacttttaa agacaaatac ggatttaaat
     3421 ttgctttgca ataaatgggg atttaaatga gtgaaaatat tgagcttttt gaaagctata
     3481 cggcaaaaac tttgggagaa ctttatagta cctttcctat tccaagcgat tttaactttt
     3541 ttgattttat cccaaaacta gaatatgaag agtttttaac acatcaatta aacgcttatc
     3601 atacgataaa ttacctaaaa aataatcatt ttttggattt tgagagtatg gatttagaaa
     3661 gcggaaaagt taaaaaagct attttaaaac cgaaagcctt agagctttta aaacaagatg
     3721 gcttaggagt gcaacttaga aaagctttaa gtacaggaag agatgagctt ataagaagta
     3781 ttgtaaatag ggctttagaa atgagcctta aatttatgtt ttaaataaag gagtaatatg
     3841 acagcacagg aaattaagga attttgcaag gaacaaggac taacttataa gcagttaggg
     3901 gagttgatag gaatgactga acctagtgta aaaacagctt taagcgttga taaaattagc
     3961 aatcaaatcg aagctagtat taatttgctt aaaaaaatta aagagcaaga gcaagaatta
     4021 aaagaattta gagctttaaa agaaatctta attaatctta caaagtctga taaataaaca
     4081 ctttcaccga caccttaaaa ttaaggcgtc gttattttaa tcaacctttc ttataaaata
     4141 ttttatttta aataactttt tacttgactt ttgattattt ttattatata attatcgtat
     4201 caaaagttaa ttaaactaac ttttgaaata aaagaaggag taaaaccaat ggaagttttt
     4261 atttgtgtag ttgatttaac gaccgccatc gttaagttga ttagcattta tctactttac
     4321 aaaatagtaa aaagataaat caaggggcga aaaagccccc acaggtaaaa acaagtttta
     4381 ctcctttttt aattttacaa aagaaaggta aaaaaatgga agtttttagc gtaattttgg
     4441 attttattat agcgactttg cttttagttg ttatttttaa actaaggggg taaaaaatga
     4501 gcaatgcccc tgtgattatc aacgaaataa aaattaacct tgagataatg aaaaatcaag
     4561 tatttattaa ttctttggat ttagcaaagg tatttaaaaa aagacacgat aatataatac
     4621 aaactatcga aaacttacca caagatgaat ttaaaactct aaattttgaa atatcatcaa
     4681 gcattcgtaa aaatggttta tttgaaaaag acacaaaatt ttacaaactt actcgcgacg
     4741 ctttttctct tttagtgatg ggttttacag gcgaaaaggc ttataaatgg aaagttgagt
     4801 ttatcaaagc ttttaatgaa atggaaaaac gccttaaaaa ccttgaacaa gagaaaatgc
     4861 aaaaactagc ttttcatcaa agcttaggtt ataaatcaca gcttaaacag caaaaggaaa
     4921 aatatgaaaa caaaatcaaa gcattgcaat acgacttaga aaagaaaaag gagttgagtt
     4981 ttaaaagaaa gcttagcaag gaagaattac tagagcttag aaaaatactg gccaaggatt
     5041 atgatattgt ttgttttaaa gaatgggaat atatgttatt tgctgaaagt gtttcaggta
     5101 aaaactataa actagaaaaa gaaaatgatt tttgtattta taaaagcata aaagatagtt
     5161 ttaattctaa attagattat tataaaaact atgaagaata cgaagaaaaa tggaaaaaaa
     5221 tattaaggag atgagatggg aattttaaaa agacttgatg aaactatcat tatcgaaaat
     5281 gataggaaaa gtgaaaaaga attagttgag tattgcattt tagaaggtat ttccctgaat
     5341 aatgcaaatt tggaaaatat caatttaagt ggcttagatt ttgataatgt gtttataaat
     5401 ggagctagtt ttaaaaatac taatttaagc aatatttcaa gtaagaatgc atcttttata
     5461 gattgcgatt ttagtggggt aagattatat ggttgcaatt tactagatac agaatttgaa
     5521 aactgcatct ttgaaaatgt agattttaga gattgcatag gagatatgaa aaatatcttt
     5581 acagtagcaa ttgataccta tgttatgaat ttttcaaaaa cacatcttag tttaggatgc
     5641 cagattaaaa ccatacgaga atggaaaaca acccatatcg atgatataga agatgaagaa
     5701 cagaaatggc tttggggtta ttacaaggat actatttttg aaattataga caaaagattg
     5761 ggagttgaaa atgattagat tagatatcgg agattactac acaagaaaag aagttgcaaa
     5821 tcttttaaaa gtaaaagagc ctatagttca caaatacgcc aaacaaggca aatttagaga
     5881 gtttaaacaa catagaaatt gttcgggatt gtatcctaaa caagatattg aaaattttat
     5941 aaaaaaatat ttcggacttg ttgatttaga tcagcaatct catcgagata atctccccac
     6001 cactgcataa ggatagcttt ttccttcaaa tttaaagcat gattatatgc agatttaatc
     6061 ttattttttt ctacatgcgc taaacacaat tctataatat cgctactcat ttggtgttta
     6121 tttctatttt cataggctag ggtgctaaac atagcacgaa agccatgcgg tgtaaaatca
     6181 tcattagagt agcccattct tctaaacatg gatctaattg tgttatcgct tataatttca
     6241 cttttacttc ttaaactata aaataaatag cccgtattaa tactcatctc tttgtatttt
     6301 ttaagcatat atacacattg agaatttaaa ggtatagtat gtgctctttt catcttcata
     6361 tcttcttgcg gtatatacca aataccattt tccaaatcaa tatcttccca ttttgcactt
     6421 cttatactaa agcttctttg tgcagttaat aaagaaaaca ttgctgcaat ttttacacta
     6481 atatatccct tgtaatcaat tatattatct actaatgctt taatttcttt agtttccaac
     6541 aaggtggcat gatttttact cgctttattt ataagcaatt cttttctatt tagatttgcc
     6601 atggggttac ttttaatata ttcttttata acaccatgtc taaaaatttc atttaaaaga
     6661 gtaaagaact tatcggcacc ttctcttata ttttcttttc taaatttttc aaaacttttt
     6721 aaaatatcct tgatttgcaa tttatctaat ataatttctc cataaattcc aaaagcaaat
     6781 ctttgtaaat aactcatata gcttttgtag gttttttcgc ttaattcaag ttttttaaga
     6841 tccatttttt ccaacgctaa ttctttaaat gttatttcat acttttctct tatactgtca
     6901 ttttcagcta aatttacttt tagattatct ctttgttttc tagcgttagc aagattgagg
     6961 gcagggtatt cccctagagt tattcttttg tatcttaaag ttttaggaca tttataatta
     7021 aatataaaag ttttcttacc gctcggataa atacaaagaa gtaggttgtc aaaatcagca
     7081 atatagtatt ttttgtcttt agcttttaag gcttttattt tggtatcgtt tagcactttt
     7141 attcctttag gtcaataaag tcaatagcaa attttagcta ggtcaataac aaagtcaata
     7201 aaaaatatct gcaagtataa taaattaaaa taaattaaaa ataatctaaa gcaattagat
     7261 atctacgaaa agcctatttt atagatgatt aaaaagaagt aaaaaaaatt gaaaaaagct
     7321 aaaagaagta caaatggtgc ggttagcgag atttgaactc gcacacgcgg agcgcaccac
     7381 cccctcaaga tggcgtgtct accaattcca ccataaccgc aaattttaga attcaaagaa
     7441 ataaaaagcc ctacttaaaa tagagctttt ttaagattaa gcaaaaacta taaaaggatt
     7501 tgcataaagt gctataagag caattacaag agcgtaaata acttgcgctt ctatcattgc
     7561 caatgcaata aacattgttg tcattaattt tggcccaagt cccgggtttc tagctgttcc
     7621 tgctatagta gccgctgcag tattacccat accgatagca ccacctagtg cagcaacgcc
     7681 aagtcctaaa cctgccgcta aaacagaaaa cgctttgatc catacattga tagcttcttg
     7741 ttcaacaggt gcattagctt cagctgcgaa agcagttgct gcaagagcta aaaatagaaa
     7801 aaagattttt ttcatttttg taacctttct ttaaaattta tagagagttt taatgtttta
     7861 attttaaatc agt
//
LOCUS       DAQUWA010000077         7539 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.077, whole genome shotgun sequence.
ACCESSION   DAQUWA010000077 DAQUWA010000000
VERSION     DAQUWA010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7539
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.077"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            65..2176
                     /locus_tag="R8X70_001588"
     CDS             65..2176
                     /locus_tag="R8X70_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEF2929347.1"
                     /translation="MARFGTKILWLFVAALGAICFAHLALQNGESVSAIYLVVAAVCI
                     YMIGYRFYGRFVAYKVLELDKNRATPAVLENDGRDFVPTNRTVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRRGRSLGEIIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGVYMRFIRPGRV
                     GEASIIGFVLLILAIHYGSVIASDPYWAKIFTLEAPTLAIIMMAYGFIAAVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIIIVAPDLQMPKANTQYFDGTGPVFAGAIFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHALPVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGSDVASAAQAISSWGFSITPEEISTLTANIGEYTILSRTGGAPTFAIGV
                     ALILHELFGGIDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGNI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATAIL
                     VKMGKAKYTWVTLIPATFVLVATLYGGIQKVMPYEEGNKVGNAVSHVAAVTIQSQKIQ
                     DLELKLNNAKDENEIAAIEKEISVATQSKIGNLINAILCVFFMLATLLVILSCIGICL
                     GKIKIPLKETKYIKLDEFQKV"
     gene            2157..2354
                     /gene="kcuS"
                     /locus_tag="R8X70_001589"
     CDS             2157..2354
                     /gene="kcuS"
                     /locus_tag="R8X70_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HEF2929348.1"
                     /translation="MNFKKFKHYYEKAERFFHPLVGLSSYDKYLEHMKHKHPEKTPKT
                     RGEFFKECLDKKYNSGGLNKC"
     gene            complement(2400..2813)
                     /locus_tag="R8X70_001590"
     CDS             complement(2400..2813)
                     /locus_tag="R8X70_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEF2929349.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKIVSVGKTSIGVEVEVSAQRVDSQGCTSC
                     INVTSALVTYVSVTREGKKKPISEELKKIHGFTNT"
     gene            2878..4737
                     /gene="ciaB"
                     /locus_tag="R8X70_001591"
     CDS             2878..4737
                     /gene="ciaB"
                     /locus_tag="R8X70_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HEF2929350.1"
                     /translation="MNNFKELAKLVKNRKENINLFYDLLDSEQWGEYFERLLTLSELK
                     RDKTTLLAILRRLVDLKEENLIQEWKKNNFKEEKITKLKHKFYEEIRKFYEKEHQELI
                     YEIKERKIVNDFYQVLIQGVHNIGLVINAFEVSWTKEIIEKNNKILATQFPNLNDAME
                     FLRKNQLYQTTPKGDICERSYGVLVRIGNMWKFVPYARFFEDEILKLEFAFDDMIDKL
                     KQIAKNEDELAYIEYFQKLKLAFCEKEEEKVIGAWQEAEFAWMKVKSPLQVGHPLEYY
                     EDNYTHAVALEWDIRIEDESDFDALKFSKDIKQSFMRVYENIGIQDEQLKNEVLHNID
                     KTQLYVCAPMIYYGAELKGLFSAQVVPNDEFVSSIAGKKIFAFLNFVYENAKTKPFMR
                     IASEIFNKDFLDYGRDILFFKEKIWKRVYEVSTIGHEFGHIFFIAKDSEKLMNQSGFF
                     KNIEEYKATSGGLVNFFYHEQEDLKLPVFHELIKRAVSLIAWQRVEEVKPYYTEGLIH
                     LSLLFQSGVLKFENNRLNVNFNLEYYENFKDATLKNYHDLAKHYALKLDAKEFLNRFC
                     ALENDIFMPLYPECKEFVQFYYDLYEKIGNEIDNSGEFERYKMQKNPKKHVFT"
     gene            4795..5085
                     /locus_tag="R8X70_001592"
     CDS             4795..5085
                     /locus_tag="R8X70_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEF2929351.1"
                     /translation="MTKADFISQVAQTAGLTKKDATAATDAVISTITDVLAKGDSVSF
                     IGFGTFSTAERAAREARVPSTGKTIKVPATRVAKFKVGKNLKDAVAKAKKKK"
     gene            5213..6112
                     /gene="cysK"
                     /locus_tag="R8X70_001593"
     CDS             5213..6112
                     /gene="cysK"
                     /locus_tag="R8X70_001593"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEF2929352.1"
                     /translation="MRVYKKVNELIGNTPIIQLEKFGANLFAKCEFLNPSHSIKDRAA
                     FAMIQSALNEGKIDSKTVIVEATSGNTGIALAMICADLGLQFVATMPESMSIERRKMI
                     TLFGAQLELTPASLGMKGAVDKANEILKNTPNSFMPSQFDNLANKNAHRKTTALEILK
                     DLDNDLDIFVAGFGTGGTISGVGEILKEKLGKIHVVAVEPLASPLLSKGEAGSHKIQG
                     IGANFIPAILNKDVIDEIITVSNEDAINTAKELAKNGLMVGISSGANVFAASVLAKKF
                     PDKKILTMLNDTAERYLSTDLFA"
     gene            complement(6118..6672)
                     /locus_tag="R8X70_001594"
     CDS             complement(6118..6672)
                     /locus_tag="R8X70_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEF2929353.1"
                     /translation="MKKVFLFAVAFVAMGILAFCLINKNQYDFNLRSAFKEQTTLEDF
                     KGKKLIVYFGYTFCPDICPSTLSLIGKNLKALKDPKAHVLFISLDISRDGNLTSTNEW
                     LRYFYPNADALIAKNDSVLKKVAKNYGVQYQKIDINDSVMKYSVAHSSEIFLIDENGK
                     LQKIIRDLNPEEVAKELKNFLSSK"
     gene            complement(6669..7121)
                     /locus_tag="R8X70_001595"
     CDS             complement(6669..7121)
                     /locus_tag="R8X70_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929354.1"
                     /translation="MKKIFFILASGLSLLILYIIFDFYVLKDRTTLSQTEVLSPLSCD
                     LNIENCTYSFKDREVLISMDPKPLQSLEITNLKIKNLGNYKNLKIKIYGLNMFMGDIM
                     PRVTKINETDYESRLVLAACVLEVMRFRAEVFEDDKPIGFHFDFDLKR"
     gene            complement(7125..>7539)
                     /locus_tag="R8X70_001596"
     CDS             complement(7125..>7539)
                     /locus_tag="R8X70_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002835031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEF2929355.1"
                     /translation="KKIITLSALLALSLYAKDIEIKDAFIKQTPPNAVNSAIFLTIVN
                     NTDKDISLIDAKTDINQVSELHTHEHKHGMKAMIQIPEIPVKAHSSTELKPGSYHIML
                     FKLNQAIDENTKANLTLTFDNNQSLEVRDIGSKKL"
BASE COUNT         2550 a         1066 c         1329 g         2594 t
ORIGIN      
        1 attttattaa atttatttat aaatttggta tcctttgaaa tatttttatt attttaggag
       61 aactatggct cgttttggaa ctaaaatttt atggttgttt gtcgcagctt taggtgctat
      121 ttgttttgct catttagctt tacaaaatgg cgagagtgta tcagcaattt atctagtagt
      181 tgctgctgtg tgtatctata tgataggata tagattttat ggacgctttg tagcgtataa
      241 ggttttagaa cttgacaaaa atcgtgctac acctgcagtt ttagaaaatg atggacgcga
      301 ttttgttcct acaaatagaa cagttttgtt tggacatcat tttgctgcta ttgcaggtgc
      361 tggtccttta gtgggtccta ttttggctgc tcagatggga tatttacctt ctatgctttg
      421 gattttagtg ggaggtgttt tagcaggtgc ggttcatgac tttgttgtgc tttttatatc
      481 cactcgtaga agaggtagaa gtttaggcga aattatcaaa gatgaaatgg gtaaatttac
      541 cggtggtgtt gcaatggtag caatttttgg tatcatgctt attatcatcg ctattttagc
      601 tatggtagtt gtaaaagctc tcgcagagtc accttgggga ttatttacca ttgcaatgac
      661 tattcctata gcaattttta tgggagtata tatgcgcttt attcgcccag gtagagtagg
      721 tgaggcttcg attataggtt ttgtgctttt aatcttagca attcattatg gtagtgttat
      781 agcttctgat ccttattggg cgaaaatatt cacattagaa gctccaactt tggcaattat
      841 tatgatggct tatggcttta tcgcagctgt tttacctgta tggtttttat tggctccaag
      901 agattatctt tctactttct taaagattgg tgttattgtt gtaatggctg tagctattat
      961 tatcgttgca cctgatttgc aaatgccaaa agcaaatact cagtattttg atggaacagg
     1021 tcctgtattt gcgggtgcta tttttccatt tttgtttata accattgctt gtggtgctat
     1081 tagtggtttt catgctctta tttcaagtgg aactactcca aaaatgcttg aaaatgaaac
     1141 tcatgctttg cctgttggat atggctctat gcttgcagaa agtgctgtag caattatggc
     1201 tttaatttgt gcttgtattt tacatcctgg actttatttt gctataaatt caagttctgc
     1261 tttaatagga tctgatgttg caagtgcggc gcaagctatt tcaagttggg gatttagtat
     1321 cactcctgaa gaaatttcta ctttaactgc aaatatagga gaatacacta tactttctag
     1381 aacaggtggg gctccaactt ttgctatagg cgtagcttta attttacatg agctttttgg
     1441 tggtattgat ctaatggctt tttggtatca ttttgctata ttgtttgaag ctttatttat
     1501 cttaacagct gtggatgctg gaactagagc ttgccgtttt atggtgcaag atatcttagg
     1561 taatgtctat aaacctttgg gaaatattca taattatcca gctggacttt tagcaaccgc
     1621 attgagtgtt gcaggatggg gatattttct ttatcaaggt gcgattgatc ctaaaggtgg
     1681 tatttatacc ctttggcctc tctttggtgt aagcaatcaa atgcttgcag gtatggcttt
     1741 acttcttgct acagccatac ttgtaaaaat gggcaaggca aaatacactt gggtaacttt
     1801 aattcctgct acatttgttt tggtagcaac cctatatgga ggaatacaaa aagttatgcc
     1861 ttacgaagaa ggaaataaag taggaaatgc tgtaagccat gtggcagcag ttactataca
     1921 aagtcaaaaa attcaagatt tagaattgaa attaaacaat gccaaagatg aaaatgaaat
     1981 tgcagcaatt gaaaaagaaa tttccgtagc tactcaaagt aagatcggaa atttaatcaa
     2041 tgccattctt tgtgtgtttt tcatgttggc cacattgctt gtcatactct cttgcatagg
     2101 aatttgccta ggtaagatta aaattccact aaaagaaacc aaatatatta aacttgatga
     2161 atttcaaaaa gtttaaacac tactatgaaa aagccgaaag gttttttcat cccttagtgg
     2221 gactttcgag ttatgataag tatttagaac acatgaaaca caaacatcct gaaaaaaccc
     2281 caaaaactag aggagaattt ttcaaggaat gtttagataa aaaatataac agcggcggtt
     2341 taaataaatg ctgataagct taacaaggat aaagttttta tcatacaaaa aattaagctt
     2401 taagtatttg taaatccatg aattttcttt aattcttcac taataggctt tttctttcct
     2461 tctcttgtaa cgctaacata agtaactaag gcagaggtta cgtttatgca agaagtacag
     2521 ccttgtgaat ccactctttg agcactaact tctacttcta cacctataga agtctttcct
     2581 acgctaacaa tcttagaata gcaagaaatt atatcaccta taaaaacagg ctctttaaaa
     2641 actaccttat ccatagatat agttacgacg cgttcaggag aaagttctct agctgctatt
     2701 gcgcctgcta aatcaatttg tgaaagtatc catccaccaa aaatattacc tgcgggattg
     2761 gtatcacttg gcattgcaac aatttttaat tttggttctc ccatatctct cattttttac
     2821 tccttatttt aaaaaatgaa ttataattca ataaagttaa aaaaggagaa taaaagtatg
     2881 aataatttca aagaattagc aaaacttgta aaaaatcgta aagaaaatat caatcttttt
     2941 tatgatcttt tagattctga gcaatggggc gagtattttg agagactttt aactcttagt
     3001 gagttgaaaa gagataaaac aactcttttg gctatattaa gacgcttagt agatcttaaa
     3061 gaggaaaatt tgatacagga gtggaaaaaa aataatttca aagaagaaaa aattaccaag
     3121 cttaagcata aattctatga agagataaga aaattttatg aaaaagagca tcaagagcta
     3181 atctatgaga tcaaagaaag aaaaatcgta aatgattttt atcaagttct tatccaagga
     3241 gtgcataata taggcttagt tatcaatgct tttgaagttt cttggactaa agagattata
     3301 gaaaaaaaca ataaaatttt agcaactcaa tttccaaatt taaacgatgc gatggaattt
     3361 ttacgaaaaa atcaactcta tcaaacaact ccaaagggtg atatttgcga aagaagctat
     3421 ggtgttttgg taagaatagg aaatatgtgg aaatttgttc cttatgcaag attttttgaa
     3481 gatgaaattt taaaactcga atttgctttt gatgatatga ttgataaatt aaaacaaata
     3541 gctaaaaatg aagatgagtt agcttatata gagtattttc aaaagctaaa actagctttt
     3601 tgtgaaaagg aagaagaaaa ggttatagga gcgtggcaag aggctgaatt tgcatggatg
     3661 aaagtcaaat ctccattaca agtaggtcat cctttagaat actatgaaga taattacact
     3721 catgctgtag ctttagagtg ggatataaga atagaagatg agagtgattt tgatgccttg
     3781 aaattttcaa aagatatcaa gcaaagcttt atgcgcgtat atgaaaatat cggaattcaa
     3841 gatgagcaac ttaaaaatga agttttgcat aatattgata aaacacagct ttatgtttgc
     3901 gcaccgatga tttattatgg agctgagctt aagggtttgt tttctgcgca agttgttcct
     3961 aatgatgaat ttgtaagttc tattgcaggc aaaaaaatct ttgctttttt aaattttgtc
     4021 tatgaaaatg ctaaaacaaa accttttatg agaattgcta gtgaaatttt taataaagat
     4081 tttttggatt atggaagaga tattttattt ttcaaagaaa aaatttggaa aagagtttat
     4141 gaggtttcta ctataggaca tgaatttggt catatatttt ttatcgctaa agacagtgaa
     4201 aaacttatga atcaaagtgg tttttttaaa aatatcgaag aatataaggc aacaagtggc
     4261 ggacttgtta atttctttta tcatgaacaa gaggatttga aattacctgt ttttcatgaa
     4321 cttattaaaa gagctgtatc tttgatagct tggcaaagag ttgaagaggt taagccttat
     4381 tatacagaag gacttattca tttatcacta ttatttcaaa gtggagtttt gaaatttgaa
     4441 aacaatagat taaatgttaa ttttaatctg gaatattatg aaaattttaa agatgcaact
     4501 ttaaaaaatt atcatgattt agctaaacat tatgctttaa agcttgatgc taaagaattt
     4561 ttaaatcgtt tttgtgcttt agaaaacgat atttttatgc ctctttatcc agaatgcaaa
     4621 gaatttgttc aattctacta tgatctatat gaaaaaatag gcaatgaaat tgacaatagt
     4681 ggggaatttg agcgctataa aatgcaaaaa aatcctaaaa aacatgtttt tacttgatat
     4741 tgttttctaa atatgctaga attaggcgtt tcaatataaa acaaaggagc ttttatgact
     4801 aaagcagatt tcatttcgca agttgctcaa actgctgggc taacaaaaaa agatgctact
     4861 gctgctactg atgcagttat ttctactatc actgatgtat tggctaaagg tgatagcgtt
     4921 agctttatag gttttggtac tttctcaaca gccgaaagag ccgcaagaga agcaagagtg
     4981 ccaagtactg gtaaaaccat taaggttcct gcaacaagag ttgctaaatt taaagtgggt
     5041 aaaaacctta aagacgctgt tgcaaaagct aaaaagaaaa aataatatta aggctagaaa
     5101 tttttctagc cctgcttaaa taaaaaattt aaattaatcc gacaatttat atcctttatt
     5161 tactttattt ttataaactt acttgaaact aaatttttga aaggttggtt ttatgagagt
     5221 ttataaaaaa gtaaatgaac ttataggcaa tactcctata atacaattag agaaatttgg
     5281 tgcaaatctt tttgctaaat gcgaattttt aaatccaagt cattcaatta aagacagagc
     5341 agcttttgca atgatccaaa gcgctttaaa tgagggcaaa atcgattcta agactgttat
     5401 agtcgaagct acaagcggaa atacaggtat tgcattagca atgatttgtg cagatttagg
     5461 acttcaattt gttgccacta tgccagaatc tatgagtata gaaagacgca aaatgataac
     5521 tctttttgga gcacaacttg aactaactcc tgcaagttta ggtatgaaag gtgcagtgga
     5581 taaagctaat gaaattttaa aaaatacccc aaattctttt atgccatcgc agtttgacaa
     5641 tttggccaat aaaaatgcac accgcaaaac tactgcctta gaaatattaa aagatttgga
     5701 taatgatctt gatatttttg tagcgggttt tggaacaggt ggaactatca gtggagttgg
     5761 tgaaatttta aaagaaaaat taggaaaaat tcatgtcgtt gctgtagaac ctttagcctc
     5821 tccgctactt agtaagggtg aagctggaag tcataagata caaggtatag gtgcaaattt
     5881 tatccctgct atcttaaata aagatgttat agatgaaatc atcacagtta gcaatgaaga
     5941 tgctataaat acagctaaag agcttgctaa aaacggtctt atggtaggaa tttcaagtgg
     6001 tgcaaatgtg tttgcagcaa gtgttttggc taaaaaattt ccagataaaa aaattcttac
     6061 tatgctaaat gatacagctg aaagatatct ttcaaccgat ctttttgctt aaaaatttta
     6121 tttagagctt agaaaatttt taagctcttt tgcaacttct tcaggattca aatctctaat
     6181 gatcttttgt agctttccgt tttcatcgat gagaaaaatt tcgctactat gcgcaacgga
     6241 atatttcatc acagaatcat tgatatctat tttttgatat tgaactccat aatttttagc
     6301 cactttcttt aaaacgctat cattttttgc aataagagcg tccgcattgg gataaaaata
     6361 tcttaaccat tcgttagttg aagttaaatt accatctcta gaaatatcta aagaaataaa
     6421 aagaacatga gcttttggat ctttaagggc ttttaaattt ttaccgatta aagagagagt
     6481 agaggggcaa atatcaggac aaaaagtata accaaaataa actataagtt tcttgccctt
     6541 aaaatcctct aaagtagttt gctctttaaa ggcagatctt agattaaagt cgtattggtt
     6601 tttatttatc aaacaaaaag ctagtatacc catcgcaaca aaggcgactg caaataaaaa
     6661 aacctttttc atctttttag atcaaaatca aaatgaaaac ctataggttt atcatcttca
     6721 aaaacttcag ctctaaaacg cataacttca agaacacatg cagctaaaac caatcttgac
     6781 tcataatctg tttcatttat tttagtaact ctaggcatta tatctcccat aaacatattt
     6841 aagccataaa ttttaatttt taaattttta taatttccta aatttttaat ttttaaattg
     6901 gtgatttcta aggattggag aggttttgga tccatagaaa tcaaaacctc tctatcctta
     6961 aaactataag tgcaattttc gatatttaaa tcacagctta gaggtgataa aacctcagtt
     7021 tgacttaaag tcgttctatc ttttaaaaca taaaaatcaa atatgatata aagaattaaa
     7081 agagataggc ctgaggccaa aataaaaaat atttttttca ttatctataa cttttttgat
     7141 cctatgtcac gaacttctaa actttgatta ttgtcaaaag ttaaagtcaa attcgcttta
     7201 gtattttcat caatagcttg attaagctta aaaagcataa tatgataact tccaggtttt
     7261 aactcggtac tagaatgtgc tttaacaggt atctcaggaa tttgtatcat agctttcata
     7321 ccatgtttat gttcatgagt gtgtaattcg ctcacttgat tgatatcagt ttttgcatct
     7381 attaaagaga tgtccttatc ggtattgtta acaatggtaa gaaatatagc actattaaca
     7441 gcattaggtg gagtttgttt aataaatgca tctttgattt ctatatcttt agcataaaga
     7501 cttaatgcaa gcaaagcgct taaagtgata atttttttc
//
LOCUS       DAQUWA010000078         7495 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.078, whole genome shotgun sequence.
ACCESSION   DAQUWA010000078 DAQUWA010000000
VERSION     DAQUWA010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7495
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.078"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..692
                     /locus_tag="R8X70_001597"
     CDS             <1..692
                     /locus_tag="R8X70_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HEF2929356.1"
                     /translation="DDYTLLCSINKKVNAVNDDRLSKLESPLVCFKAEICKESKDIDE
                     HKIQTWIKSLNILDELKLKIGARVIFCVNNWDKGYYNGEQGIIESITYEEDKTYIGIM
                     KNNGIKIVLEPYVFFMEELEQNNNEMFINVLASVSQFPIKLAYAITIHKSQGMSIEKL
                     VCDIDHIFENGQLYVALSRAINPATLKIYFTKRINFKAYFASILKFDISVREFYQNND
                     FLDLELENNII"
     gene            703..1401
                     /locus_tag="R8X70_001598"
     CDS             703..1401
                     /locus_tag="R8X70_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929357.1"
                     /translation="MKKIFLLAFLSLSLNAQSLELDKIRTDLYSKSGANVLKKIEISL
                     EFEGEKIKENENKLTDAVNTVISGFFYEDIFTELGKNNFKKTLEKFIDKKYKIKINEI
                     YILSLSGVEKFDLEEFKRFLASTEAKEKNVGSEVKKALDNLEFPQTPTVPNISNIETP
                     QIDQLFQDDNTQNQYDNGEIDINTLNIPKMTSDIEEKIKRDLIANPPQIFRENNSSEE
                     KGFELNLDTNLTMP"
     gene            complement(1404..1913)
                     /gene="lolA"
                     /locus_tag="R8X70_001599"
     CDS             complement(1404..1913)
                     /gene="lolA"
                     /locus_tag="R8X70_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEF2929358.1"
                     /translation="MKKIFCLFFFFLSHILATDLNFNTYSSNFTQSVKSKNSALSYSG
                     HFTLSQEQAYWSYDTPSKKEIYINKNQIVLVEHDLEQVVFSHLDNIPNLNEIFKKAKH
                     LNDNQLIAKYENINYTITLKDNEIQSIAYKDEFENDILITLNHQIKNPTINPEVFKPK
                     FPNYYDMVR"
     gene            2022..4610
                     /gene="secA"
                     /locus_tag="R8X70_001600"
     CDS             2022..4610
                     /gene="secA"
                     /locus_tag="R8X70_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEF2929359.1"
                     /translation="MFLNTLKAVFGTKNDREVKKYLKRVAQINALESKYQKLNDDELK
                     AEFGKFKEQILSGEKKESDILNDVFAIVREVGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVILS
                     SQNSDLEHKKAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHHFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQRGEAVLPPAKPEGDFIVDEKNRNILIT
                     EAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYEKLAGMTGTAQTEA
                     TEFSQIYSLDVVSIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKNIMERLGIQEGEHIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDEEYDIKTKISQNIAEYSAYVMNDFMIEESGVDLNFENLKAKILDECSIE
                     LKQSDFENLSLIKMQEKLSEILEKSYDEKMSKLDSKQLHHIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVKFNQEEAQ
                     NLEEKANQENEALFEKSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            4607..5812
                     /locus_tag="R8X70_001601"
     CDS             4607..5812
                     /locus_tag="R8X70_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2929360.1"
                     /translation="MKKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITIVPKFYSPMDDDLVTELKREFPHLLFSPYISTQVV
                     AKADNRFEGGVLFGVNFNDEVKINEVVAKALKDENLSGFDILVGSVLADELNLHKNDK
                     LSLIFSNLSPSGFSLVPQAKRFDVKARFASGLIFYDKAYMYTDVNALRKVLGISNQQS
                     YDGVHVYSENAFKDVEKLKSYLKSDYAVVGWWEQNQNFFSALKLEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRTEIALLLALGASKLEVKKSFFALGMLIGGGGMIIGIILAF
                     FALWLLGNFDIVTLPADVYGTSKLPLDLSVMDFSLTLVGALIIIALSSYYPAKKATQI
                     NVLDTLRNE"
     gene            5822..6940
                     /locus_tag="R8X70_001602"
     CDS             5822..6940
                     /locus_tag="R8X70_001602"
                     /inference="COORDINATES: protein motif:HMM:NF017893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane CreD family protein"
                     /protein_id="HEF2929361.1"
                     /translation="MEQKFDENKFMQEYARNQRLKSLTLKGVLIFIISIVLLIPLLML
                     KTLVEDRKYNAQNVISLMGKAWGSDEFYTPSLNEKILPNKLELWVDLKYQERIKGIYK
                     IPLYTAFVDFNASFNMENLSNFDENSIQFSNGNLKDLQFNILKDVLWVSGTLQLKGYG
                     SFDANMQAKENIIHINSNATNPSFEYALPNDYSIDKKGFSAFYEFQNSISNDRVEKRR
                     LSVEFYQGVDEYRLIDRMIKYGYLFIILTFLVLFLCELASKKNVILLQYAILGASLIV
                     FYLMLLSFSERIGFNFAYLFSSLAIIIPLSLYTLSIMGQKRFAIVMATILFILYLCLF
                     IMLKQDEYALLIGTFIAMFGIYAAMYFTRNLNKDYHQG"
     gene            complement(6949..7326)
                     /locus_tag="R8X70_001603"
     CDS             complement(6949..7326)
                     /locus_tag="R8X70_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929362.1"
                     /translation="MLILGHYLLTQNSNFCFIDESKKLKKDQISCFLYNEEIIQNAKN
                     ENLDFAVLIQDKNEIFLSNALGAKFLLFDDENLARFASEVAEFYLFDSKILLLVENLH
                     KLEKAYELRLDGVILKSLIQDYH"
BASE COUNT         2704 a          934 c         1351 g         2506 t
ORIGIN      
        1 atgatgatta taccttgctt tgtagtataa ataaaaaggt aaatgctgtc aatgatgata
       61 gattaagcaa gcttgaaagt ccgcttgttt gttttaaagc tgaaatttgc aaagaatcta
      121 aagatataga tgagcacaaa attcaaactt ggataaaaag tttaaatatt ttagacgagc
      181 ttaaactcaa aataggtgca cgcgttattt tttgtgtgaa taattgggat aagggatatt
      241 ataatggcga gcaaggcatc atcgaaagta tcacttatga agaggataag acttatattg
      301 gtatcatgaa aaacaatggt attaaaattg tgcttgaacc ctatgtattt tttatggaag
      361 agcttgagca aaataataat gaaatgttta tcaatgtact tgcaagcgta agtcaatttc
      421 ctatcaaact agcttatgct attaccatac ataaatcaca gggtatgagt atagaaaaat
      481 tagtatgcga tattgatcat atttttgaaa acggacaact ttatgtggct ttatcgcgtg
      541 ctataaatcc tgctactctt aaaatttatt ttacaaaaag aataaatttt aaagcctatt
      601 ttgctagtat tttaaaattt gatataagtg tgagagaatt ttatcaaaat aatgattttt
      661 tagatcttga attggaaaat aatatcattt aaaaggatga gaatgaaaaa aatattttta
      721 cttgcttttt tatctttaag ccttaatgca caaagtttag agcttgataa aataagaaca
      781 gatttatact caaaaagcgg agcaaatgta cttaaaaaaa ttgaaatttc tttagaattt
      841 gaaggcgaga aaataaaaga aaatgaaaac aagcttacag atgcggtaaa taccgtgatt
      901 tctggatttt tttatgaaga tatttttaca gagcttggaa aaaataattt taaaaaaact
      961 ttagaaaaat ttatagataa aaaatacaaa attaaaatca acgagattta tatcttatct
     1021 ctaagcggag tagaaaaatt tgatttagaa gaatttaagc gtttcttggc aagtactgaa
     1081 gctaaggaaa aaaatgtagg tagcgaagtt aaaaaagctc ttgataattt agaatttcct
     1141 caaactccca cggttccaaa tatttccaat atagaaactc cacaaataga tcaacttttt
     1201 caagatgata atacacaaaa tcaatatgac aatggagaaa tcgatatcaa tactcttaat
     1261 atccctaaaa tgacttcaga tatagaagag aagataaagc gagatttgat tgcaaatcca
     1321 ccgcaaattt ttagagaaaa taatagctct gaagaaaaag gctttgagtt gaatttggat
     1381 acaaatttaa caatgcctta atcttagcga accatatcgt aataattagg aaatttgggt
     1441 ttaaaaactt caggattgat agtaggattt ttgatttgat ggtttagagt gattaaaata
     1501 tcgttttcaa attcatcctt ataagcaata ctttgaattt cattatcttt gagcgtgata
     1561 gtataattta tattttcata ttttgcgatc aattgattat cgtttaaatg ttttgctttt
     1621 ttaaaaatct cattgagatt agggatgtta tcaagatgtg aaaagacaac ttgttctaaa
     1681 tcatgctcta ctaaaacaat ttgattttta ttgatatata tttctttttt gcttggagtg
     1741 tcgtagctcc aataagcttg ttcttgactt aaagtaaaat gtcctgagta ggaaagcgcc
     1801 gaattttttg attttactga ctgtgtgaaa ttgctagaat aggtattaaa attaagatca
     1861 gtagctaaaa tatgacttaa aaaaaagaaa aataaacaaa atattttttt catacaattg
     1921 ccttataaat ttattttgga atttttgtag cattctagct aattttaatt aaataatcgt
     1981 tataatcata gcttgaaaaa aatatcaaaa gaggtttaaa aatgttttta aataccttaa
     2041 aagccgtatt tgggacaaaa aatgatcgtg aggtaaaaaa atatcttaaa cgagtagcac
     2101 aaataaatgc tcttgagagc aaatatcaaa aattaaatga tgatgaatta aaggctgaat
     2161 ttggaaaatt taaagagcaa attctaagcg gagaaaaaaa agaaagcgat atcttaaacg
     2221 atgtttttgc catagttaga gaagtgggaa aaagaacttt aaatatgcgc cattttgatg
     2281 tgcaattaat cggcggtatg gttttgcacg atggaaaaat cgcagaaatg aaaacagggg
     2341 agggtaaaac tcttgtggca actctacctg ttgtgctaaa tgctatgagt ggaaaaggcg
     2401 tgcatgtggt tacagtcaat gattatttgg ctaaaagaga tgcagaacaa atgagtgcga
     2461 tttataattt tttaggcttt agcgtaggcg tgattctttc atctcaaaat agtgatttag
     2521 aacataaaaa agcctatgat tgtgatatta cttatgggac aaataatgaa tttggttttg
     2581 attatttgcg tgataatatg aaattctcaa aggctgaaaa ggtacaaaga gaacaccatt
     2641 ttgttatcgt ggatgaagta gatagcattt taattgacga agcaagaacc ccgcttatca
     2701 tcagcggtcc tacaaatcgt actttagacg gttatatcaa ggcaaatgaa gtggctaagc
     2761 aaatgcaaag aggggaagca gttttacctc ctgctaagcc tgagggtgat tttatagtgg
     2821 atgaaaaaaa tcgtaatatc ttaatcacag aagcaggaat tgccaaggct gaaaaattat
     2881 ttggtgtgga aaatttatac agtcttgata atgctatctt ggctcatcag cttgatcaag
     2941 ctttaaaggc acacaatctt tttgaaaaag atgtgcatta tgttctaaga aataacgaag
     3001 taatcatcgt tgatgaattt acgggtcgtt taagcgaggg tcgccgattt agcgaaggac
     3061 ttcatcaagc tttagaggct aaggaaaatg taaaaattca agaagaaagc cagactttag
     3121 ctgatattac atttcaaaac tattttagaa tgtatgaaaa attagccggt atgacaggaa
     3181 cggcacaaac agaagcaact gaattttccc aaatttacag cttagatgtt gtttctatac
     3241 ctacaaatat ccctatcaaa agacaggata aggatgattt gatttataaa actcaaaatg
     3301 aaaaatttaa agctgtaatc gaagaaatca aaaaagcaaa cgctaaagga caacctgtac
     3361 ttgtaggaac tgcgagcatt gaaagaagtg aagtttttca caatatgctt gtaaaagaaa
     3421 aaattcctca tcatgtttta aatgctaaaa atcatgaaca agaggcttta attattcaag
     3481 atgcgggaaa aaaaggtgca gtgactatcg ctacaaatat ggcaggtcgt ggcgtggata
     3541 taaaaatcga tgatgagata agagctttgg gtggacttta tatcatcggt acagaaagac
     3601 atgaaagccg ccgtattgat aatcaacttc gtggtcgtgc aggaaggcag ggtgatccag
     3661 gtattagccg tttttatttg agtttggaag ataatctttt aagaattttt ggtggtgatc
     3721 gtatcaaaaa tattatggag cgcttgggaa tacaagaggg cgagcatata gaatcaagga
     3781 ttgtaacaag agcagttgaa aatgcgcaaa aaaaggttga aagcttacat tttgaaagta
     3841 gaaaacattt gcttgagtat gatgatgtgg ccaatgaaca aagaaagacc atctatcgtt
     3901 accgcaatga acttttagat gaagaatacg atattaaaac taaaatttca caaaatattg
     3961 cagaatatag tgcttatgtc atgaatgatt ttatgattga agaaagtgga gtggatttaa
     4021 attttgaaaa tttaaaagct aaaattttgg atgaatgttc cattgaactt aaacaaagtg
     4081 attttgaaaa tcttagtttg attaaaatgc aagaaaaact aagcgaaata ctagaaaaat
     4141 catacgatga aaaaatgtca aaattggatt ctaaacagct tcatcacata gagcgcattt
     4201 tatatttgca agttttagac aatgcttggc gtgagcattt atatcaaatg gatattttaa
     4261 aaacaggtat aggacttcgc ggatataatc aaaaagatcc tttagtagaa tacaaaaaag
     4321 aaagttataa tcttttttta gagcttgtta atcgtatcaa atttgatagc atcaaattgc
     4381 tttttagtgt gaaatttaac caagaagaag cacaaaattt agaagaaaaa gcaaatcaag
     4441 aaaatgaagc tttatttgaa aaatcagtgg aaatgggtgc tagtgaggat aatttaggcg
     4501 aggctgaatt taaaaaagtt ccacgcaatg ctccttgccc ttgcggaagc ggtaaaaaat
     4561 ttaaagaatg ccatggaaaa agcgggccta aacaaggaat tttagcttga aaaaaagcgt
     4621 tttaaaatat ctacttttta aatacttaag atttgataaa gagcaaccct ttatcaatct
     4681 ctctatgctt ttggcttttt taggagtttg tgtaggactt tgcgttttac ttgtagcaat
     4741 ggctatcatg aatggctttg ataaagaatt tgaaaagcgt ttttttgtga tgaattatcc
     4801 tattaccata gtgccaaaat tttattctcc tatggatgat gatttggtaa cagagctcaa
     4861 aagagaattt cctcatttgc tttttagtcc gtatattagc actcaagttg tagcaaaagc
     4921 ggacaatcgc tttgaaggag gcgtcctttt tggcgtgaat tttaacgatg aagttaagat
     4981 caatgaagtg gtagctaaag ctttaaaaga tgagaattta agcggctttg atatacttgt
     5041 gggttcagtg cttgcagatg agcttaattt acataaaaac gataagcttt cacttatctt
     5101 ttcaaatctt agccccagtg gattttcttt agttccacaa gctaaacgct ttgatgtgaa
     5161 agcgcgtttt gcttcagggc ttatatttta tgataaagct tatatgtata cagatgtaaa
     5221 tgcacttaga aaagtacttg gtattagcaa tcaacaaagt tatgatggcg tacatgttta
     5281 tagcgaaaat gcatttaagg atgtagaaaa acttaaatcc tacctaaaga gtgattatgc
     5341 tgttgtaggc tggtgggaac aaaatcaaaa cttcttttct gctcttaaac ttgaaaaaag
     5401 agcgcttttt attgttttga tgcttattat cttggtggca agcttaaata tagtgagttc
     5461 tttactgatg atagtaatga atcgtcgcac cgaaatcgca cttttacttg ctttaggtgc
     5521 tagtaaatta gaagttaaga aaagcttttt tgccttaggc atgctaatag gtggtggcgg
     5581 tatgatcata ggaatcatac tcgcattttt tgctttgtgg cttttaggaa attttgatat
     5641 tgtcaccttg cccgcagatg tttatggtac gagcaaatta ccgcttgatt tatctgtgat
     5701 ggatttttct ttaaccttgg tgggtgcttt gataatcatt gctttatctt cttattatcc
     5761 tgctaaaaaa gcaacacaaa tcaatgtttt agatacttta agaaacgaat agggaaaaaa
     5821 gatggagcaa aaatttgacg aaaataaatt catgcaagag tatgctagaa atcaaagatt
     5881 aaaatctctt actttaaaag gtgttttgat ttttattata agcatagttt tacttattcc
     5941 tttattgatg ttaaaaacct tagtagaaga tagaaaatat aatgcacaaa atgttatttc
     6001 attgatggga aaagcttggg gtagtgatga gttttatacg ccaagtttaa atgaaaaaat
     6061 tttgcctaat aaattagagc tttgggtgga tttaaaatat caagaacgca ttaagggtat
     6121 ttataaaatt ccgctttata ctgctttcgt ggattttaat gcaagtttta atatggaaaa
     6181 tttaagcaat tttgatgaaa attctatcca attttcaaat ggaaatttaa aagatttaca
     6241 atttaatatc ttaaaagatg ttttatgggt aagtggaact ttacaattaa aaggttatgg
     6301 ctcttttgat gctaatatgc aagctaaaga aaatatcata catataaact caaatgctac
     6361 aaacccttcc tttgaatatg ctttgccaaa tgattattct atcgataaaa agggctttag
     6421 tgctttttat gaatttcaaa atagcatctc aaatgatagg gtggagaaaa gaagattgag
     6481 tgttgagttt tatcaagggg tggatgagta tcgcttgatc gatcgtatga taaaatatgg
     6541 gtatttgttt attattttaa ctttcttggt gttgttttta tgcgagcttg cttcaaagaa
     6601 aaatgttatt ttacttcaat acgcgatttt aggagcaagt ttgatagtat tttaccttat
     6661 gcttttaagt tttagcgagc gcataggatt taattttgct tatctttttt caagcttggc
     6721 tataattata cctttatcac tttacacttt aagcatcatg gggcaaaagc gttttgctat
     6781 agtaatggct acgattttat ttattttata tttatgtttg tttattatgt tgaagcaaga
     6841 tgaatatgca ttattgatag gaacctttat agctatgttt ggaatttatg cagctatgta
     6901 ttttactaga aatttaaata aagattatca tcaaggatga tttttttctt aatgataatc
     6961 ttgtattaga ctttttaaaa tcactccatc aagtcttaat tcataagctt tttcaagctt
     7021 atgtaaattt tctactagga gtaaaatttt gctatcaaag agataaaatt ccgctacttc
     7081 agaagcaaaa cgagctaaat tttcatcatc aaaaagtaaa aatttagccc ctaaagcatt
     7141 gcttagaaaa atttcatttt tatcttgtat caaaacagca aaatccaaat tttcattttt
     7201 tgcattttgg atgatttctt cattatacaa aaagcaagaa atttgatctt tttttagttt
     7261 tttgctttca tcaataaagc aaaaatttga attttgtgtt aataaatagt gtcctaaaat
     7321 cagcatttta gtttccttat tttgttttta taatcatagt taagtttaac ttataaaaaa
     7381 ttttaaaatt agagcttaat taaatttaat tagactttgg ctaaaatatc tacaataaaa
     7441 ggagaaaact tgtctttatt tatacaaaaa tgtaaaaatt ttaaatttca agcac
//
LOCUS       DAQUWA010000079         7447 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.079, whole genome shotgun sequence.
ACCESSION   DAQUWA010000079 DAQUWA010000000
VERSION     DAQUWA010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7447
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.079"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            110..859
                     /gene="modA"
                     /locus_tag="R8X70_001604"
     CDS             110..859
                     /gene="modA"
                     /locus_tag="R8X70_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEF2929363.1"
                     /translation="MKKLVLCFIVLFLSLNLNAQNLSVFVASSASKAMEEVKNEFLKS
                     HPNDNIDLVFGASGKYYQLLKQGREFDLFFSADTKYAQAIYEDQNALDKPKVYVLGIL
                     ALYSLDESLLEGGIEKLKDKANKIHHLSLANPKVAPYGVAAKEVLENLNLDKLFEDKI
                     VLGENISVPVLHVDSNNADLGIVAYSLVSSINHPKGKAILIDQKYFTPLKQSYVITKY
                     AKDKKLAFEFSDFISSQKAKEIFKKYGFDTP"
     gene            856..1257
                     /locus_tag="R8X70_001605"
     CDS             856..1257
                     /locus_tag="R8X70_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HEF2929364.1"
                     /translation="MNILNGKIIELLNEGEIVIVKISIKEQIFKVLMLDLHSLQDLKI
                     GTKIQVLFKEHELGFTLPHSILSVENSFLARIKSIKKGKILYHIFFDFEGDEISSIIT
                     KEKALELKLEEGQEWLCFVKENDIILKAVYG"
     gene            1250..1918
                     /gene="modB"
                     /locus_tag="R8X70_001606"
     CDS             1250..1918
                     /gene="modB"
                     /locus_tag="R8X70_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEF2929365.1"
                     /translation="MDNDFLQTLYLTFKLAFITTFMLFFIGVFLAYLLSFVKFPFKSL
                     VQTFVALPLVLPPSVLGFYLLISFSQNSFLGQFLKEYFNLSLVFSFEGLVFASLIFSL
                     PFMVNPLQSAFSSINQNLLDASYTLGKGKIYTLFRVILPNSKVGIFSACAMSFAHTIG
                     EFGVVMMIGGHKKGETLVASIAIYDELEVLNYTLAHQYAFTLFAISFTILLSLYFVNK
                     KIAL"
     gene            1928..2806
                     /locus_tag="R8X70_001607"
     CDS             1928..2806
                     /locus_tag="R8X70_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEF2929366.1"
                     /translation="MIKIDIKLPINTAKGKKQLELNTCLKANEITAIFGESGAGKTTL
                     LKIIAGLIKPEFGRIEVGDELWFDTQKNVNLAIQKRKIGFVFQDYALFPNMSVKENIS
                     YAATSKQKAEELLSLMNLENLAKIYPKNLSGGQAQRVALARALAREPQILLLDEPLSA
                     LDFKMRSFLQDELVKILQHFKITTLLVSHDLAEIYKLSHRILELSDGKIIKDARTNEF
                     FTSSNLSAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDVKIGDT
                     LLLSIKAFNPIIVGKL"
     gene            3183..3392
                     /locus_tag="R8X70_001608"
     CDS             3183..3392
                     /locus_tag="R8X70_001608"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929367.1"
                     /translation="MKKIVASLICILFLGGCSNKTAGMVAIGVIHSPQIVALGAVIVV
                     TSPFWILEKIEENSRKAKGANRKRF"
     gene            3394..3921
                     /locus_tag="R8X70_001609"
     CDS             3394..3921
                     /locus_tag="R8X70_001609"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929368.1"
                     /translation="MSVPFYKLVDLCNPKFNLEPKITDEFLEEIKHELSYFKEREKYF
                     LQILNKLNDEKSEEYKKFTQEYEKNSQKYILAYKKVFASENDAWFNEMDKKRLYAFYK
                     SYEYYPFIENAKTLNENKVFAVSDREFDDFYFDDEFLVKNESEILEKLSQEHIKEYKK
                     FKEKIFKDSKKNQSK"
     gene            4190..4405
                     /locus_tag="R8X70_001610"
     CDS             4190..4405
                     /locus_tag="R8X70_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEF2929369.1"
                     /translation="MPFVNIRITKENGEPTLKQKQELIEGVTDLLAKVLNKNKASTVV
                     IIDEIEMDNYGLGGKTITEVRKEQKKS"
     gene            complement(4489..5631)
                     /locus_tag="R8X70_001611"
     CDS             complement(4489..5631)
                     /locus_tag="R8X70_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001263563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HEF2929370.1"
                     /translation="MRIMICFLSTFVANGLARFGYVVLIPIMIISGRLNENQSIQLGI
                     AVLVGYIFGSFFINFLRKFISLENIAKLSFLIISLSFFACMMESLPFIWAWLWRFFAG
                     VASASLMILAAPLSLPYVKERFRGRIGGFVFSGIGLGAVVSGFTLPFIANINIDLVWI
                     VLGGVVFCAFILSLFSLRTLKRSKQTIHKDNKFKIPYGLWLLIISYILNAIGYLPHTL
                     FWVDYLVRDLKFSTLLAGSSWAFFGIGAVLGSIGSGILADRIGIKNAHIVILFFKALS
                     CFIAAFASDLFWLNFSIFVMGFTTTGNVTLTNALALKIVSKKHFPTSSSFLTLAFGIF
                     QAIFSFLFAYLLKFLDGYFWMFIFCGFCLIFSFLVLLPIKISTLRN"
     gene            complement(5634..7355)
                     /locus_tag="R8X70_001612"
     CDS             complement(5634..7355)
                     /locus_tag="R8X70_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HEF2929371.1"
                     /translation="MLRVGIIGFGPRGLSILERLVSKKLGQIINDKLEIYIFDPNSLG
                     SGCHSPKQSSRLLVNTVASQMTIFADETICPNEFFIKGPNFYEFLLSKGYKADKNGYY
                     SRVLLGKYLEHSFQCILKLCSQDISIHIVKEYAQCIIQQEKYFIISGENTKIEVDSAF
                     ITTGHNQNQNNFPMYSAYPLEISTQNISANDAIGIKGLGLSAIDVITMLTSGNGGFFE
                     KLNNELIYNPSGKEPKIFVFSRSNLPLMARAITQKETREQYQAIFFNSTTIKKLKKEF
                     KKLNFEKQILPLIIKEMEYVYSYTYINLKSQEDSFLFRNEYLTSIDTQSVLDKYIPKC
                     DQFNFYSLVNPLQKIIDKQDFYSQLITYLENDIKEARLGNLKSPIKSACDVLRDVRDN
                     LRLCVDFGGLDEESYKFFIHSFVPINNRLCVGPPLVKIEELLALIKANVVNVLHDVTI
                     KHIENTQFQLVDSFNNSYCVNRLIDARINEIKINDNALFQSLIANNLATKFNYGNLEL
                     ECLKIDENFCSINKDNKTIDRLFILGLPTEGIKFYTFILPRPHIASTFLCDSNKAVDS
                     LIKRTQA"
BASE COUNT         2752 a         1080 c         1097 g         2518 t
ORIGIN      
        1 aaaataaact cacttatcat cctattttta ttttatgcaa aaaagataca aaataaaatt
       61 tcttatgtta taatacaaaa aatcaagatt atcgacaaag gaaagtgcaa tgaaaaagct
      121 cgtgttatgt tttatagtgt tgtttttatc tttaaattta aatgcacaaa atttaagtgt
      181 tttcgtagct tcttcggctt caaaagctat ggaagaggtc aaaaatgaat ttttaaaatc
      241 acaccctaat gacaatatag atcttgtttt tggcgcttca ggaaagtatt atcaactttt
      301 gaaacaaggg cgggaatttg atctattttt ttcagccgat acaaaatacg cgcaagcaat
      361 ttatgaggat caaaacgctt tagataaacc aaaagtttat gttttaggta tcttagccct
      421 atatagctta gatgaaagct tacttgaagg tgggatagaa aagctaaaag ataaagcaaa
      481 taaaattcat cacctaagcc ttgcaaatcc aaaggttgct ccttatggag tagctgctaa
      541 agaagtgctt gaaaatttaa atttagacaa actctttgaa gataaaattg ttttaggtga
      601 aaatatctcc gtgcctgttt tacatgtcga tagcaataat gcagatttgg gtattgtggc
      661 ttattctcta gtatcttcta tcaatcatcc taaaggcaaa gctattttaa ttgatcaaaa
      721 atacttcact cctttaaaac aaagctatgt catcacaaaa tacgctaaag ataaaaaatt
      781 agcctttgaa tttagcgatt ttatcagttc gcaaaaagca aaagaaatct ttaaaaaata
      841 cggatttgac acaccttgaa tatcttaaat ggtaagatta tagagctttt aaatgagggt
      901 gagattgtca tcgttaagat cagtattaaa gagcaaattt ttaaagtttt aatgcttgat
      961 cttcattctt tgcaagatct taaaataggt acaaaaattc aagtactttt caaagaacac
     1021 gaacttggct ttactttacc ccattctatt ttaagtgtgg aaaattcatt tctagcaagg
     1081 attaaaagta tcaaaaaagg caaaattcta tatcatatct tttttgattt tgagggtgat
     1141 gaaatttcta gcattatcac caaagaaaaa gccttagagc tcaaacttga agaaggacaa
     1201 gaatggcttt gctttgtcaa ggaaaatgat atcattttaa aggctgttta tggataatga
     1261 ttttttacaa accctttatc ttacctttaa acttgcattt atcaccacct ttatgctctt
     1321 tttcatcgga gtatttttag cctatctttt aagctttgtg aaatttcctt ttaaaagctt
     1381 ggtgcaaacc tttgtagctt tgcccttggt tttgcctcca agtgttttgg gtttttattt
     1441 gctcataagc ttttcacaaa acagcttttt aggacaattt ttaaaagaat attttaacct
     1501 ttctttggtt tttagctttg aaggtttggt atttgcttct ttgatttttt ccctaccctt
     1561 tatggtaaat cctttacaaa gcgctttttc atcgatcaat caaaacctac ttgatgcttc
     1621 ttatactcta ggaaagggta aaatttacac actttttaga gtaattttgc ccaattctaa
     1681 agtagggatt tttagcgctt gtgcgatgag ttttgcacac actatcggtg aatttggagt
     1741 ggtgatgatg ataggtggac ataaaaaagg tgaaactttg gtcgcaagta ttgctattta
     1801 tgatgagctt gaagttttaa actatacttt agcacatcaa tacgctttta ctttatttgc
     1861 gatttctttt accatactct taagtcttta ttttgtaaat aaaaaaatcg ctctataggc
     1921 cacttttatg ataaaaatcg atataaaact tcccatcaac acagcaaaag gcaagaagca
     1981 actagaatta aacacttgct taaaagcaaa tgaaatcact gctatttttg gggaaagcgg
     2041 tgcgggaaaa acaactctac ttaaaatcat tgcaggactt ataaaacctg aatttggacg
     2101 catagaagta ggagatgagc tttggtttga tacccaaaaa aatgtcaatt tagccataca
     2161 aaaaagaaaa atcggctttg tttttcaaga ttacgctctt tttccaaata tgagcgtaaa
     2221 agaaaacatt tcttatgctg cgacttcaaa acaaaaagca gaagagcttt taagcttaat
     2281 gaatttggaa aatttagcca aaatttatcc caaaaattta agtggcggac aagcacaaag
     2341 agtggcttta gcaagggctt tagcaagaga gccacaaatt ttacttttag atgagccttt
     2401 gagtgcattg gactttaaaa tgcgatcttt tttacaagat gagcttgtga aaattttaca
     2461 acattttaaa atcacgactt tattagtaag tcacgatttg gctgaaattt acaaattgag
     2521 ccatagaatt ttagagctta gtgatggaaa aatcatcaaa gatgcaagaa caaatgaatt
     2581 ttttacctca tcaaatttaa gtgcgaaatt acgcttaagt gcaactttgc tagaaattaa
     2641 aaaaagtgat attttagtgg ttttaacctt gcttttaaat caagatatta ttaaaatcac
     2701 tcttagtgaa gaggaatttc taaaagctta tcaagatgta aaaatcggcg atacgctttt
     2761 gctatccata aaagccttta accctatcat cgtaggaaaa ctttaagaaa gtaagtcttt
     2821 aaattccatt tgaaattctt ttaagatttg atataaatga gtaagattat aattattttc
     2881 ttgtttgatt ttagcaataa ttggtaattt gcgccctaaa attcccacta acgaaaacta
     2941 ggaattttgc gttttaatct tttttaatat tttcaacatt cttatcaaaa aaatgcttat
     3001 atcttgtttc aagccgcact tgctaatttt tataatagca ataataaaca aaattcaatg
     3061 ccttaaatta accgcaaatt attctaaaat ttgctccaaa tttggagcaa ttctcatttt
     3121 taatttaaat aaaatagtta taattgtttt cattgtttta aaattagctt agggtaaaaa
     3181 caatgaaaaa aatcgtcgct agtttaatct gtattttgtt tttgggtggg tgtagcaaca
     3241 aaacagcagg aatggtggcg ataggcgtga tccattcgcc tcaaattgta gcacttggtg
     3301 cagttatcgt ggttacttct ccattttgga ttttggaaaa aatagaagaa aatagccgta
     3361 aagccaaagg agcgaataga aaaagattct agtttgtcag ttccttttta taagcttgta
     3421 gatttatgca atcctaaatt taatttagaa ccaaaaatta cagatgagtt tttagaagag
     3481 attaaacacg agctttctta ttttaaagag cgcgaaaaat attttttgca aatattaaat
     3541 aagttaaatg atgaaaaaag cgaagaatat aaaaaattca cacaagaata tgaaaaaaat
     3601 agccaaaaat atattcttgc ttataaaaag gtttttgcaa gtgaaaatga tgcttggttt
     3661 aatgaaatgg ataaaaaaag attgtatgct ttttataaat cttatgagta ttatcctttt
     3721 attgaaaatg ctaaaacatt aaatgaaaat aaagtttttg ctgtaagtga tagagaattt
     3781 gatgattttt attttgatga tgaattttta gtgaaaaatg aaagtgaaat tttagaaaaa
     3841 ctcagccaag aacacattaa agaatacaaa aaatttaaag aaaaaatttt taaagattct
     3901 aaaaaaaatc aatcaaaatg aaattgcttt aaatgatttt atgatatttt tcaaatcgaa
     3961 aatgagaaat ttaaacccat tttaggctat gtttcttata aacttgtaaa tgatcctgaa
     4021 atacattgca cttttattaa tggaaaaatg taaatcttgt ttttacattt ataattttac
     4081 cttatctata ctttatttag ttatttaaat ttacatatta agcttaaata tatcatataa
     4141 ttgtaaaaaa tttattataa tatagcaaaa ttaaaattaa ggagaaatca tgccttttgt
     4201 taatattaga atcacaaaag aaaatggcga acctacactc aagcaaaagc aagaattgat
     4261 tgaaggtgtt acagatttac ttgctaaggt tttaaacaaa aataaagctt ctactgttgt
     4321 aattatcgat gaaattgaaa tggataatta tggtttaggc ggaaaaacta tcactgaagt
     4381 aagaaaagag cagaaaaaaa gctagttttc tttgcagtta gtgatcaaag cctatttgct
     4441 tttacctata ttctgcttta aatttaaagc agaactttat agctgaagtt agtttcgcaa
     4501 agtgcttatt tttataggca aaagcacaag aaagctaaat atcaaacaaa acccacaaaa
     4561 gataaacatc caaaaataac catctaaaaa ttttaacaaa taagcaaaaa gaaaagaaaa
     4621 aatagcttga aaaattccaa aagcaagggt tagaaaactt gagcttgtag gaaaatgttt
     4681 tttagaaaca atttttaatg ctagggcatt agtaagtgtt acattgcctg ttgttgtaaa
     4741 gcccataaca aaaatactaa agttaagcca aaacaaatca ctggcaaaag ctgcgataaa
     4801 acaagataag gctttgaaaa ataatattac aatgtgtgca ttttttatcc cgattctatc
     4861 agctaaaatt ccactaccta tacttcctaa gactgctcct ataccaaaaa aagcccaaga
     4921 tgagccagca agtagggttg aaaattttaa gtctcttaca agataatcaa cccaaaaaag
     4981 cgtgtgaggt aaatatccta tggcattaag aatatatgaa ataataagaa gccataatcc
     5041 ataaggaatt ttaaatttat tatctttatg tattgtttgt ttagatcttt taagtgttct
     5101 aagtgaaaaa agacttaaga tgaaagcgca aaaaaccaca ccacctaaaa caatccaaac
     5161 caaatcgata ttgatattag cgataaatgg taaagtaaag ccactaacaa cagcaccaag
     5221 tcctataccg ctaaatacaa aaccccctat acgcccccta aaacgttctt taacataagg
     5281 caaagaaagt ggtgcagcaa gtatcatcaa agaagcgctt gccacaccag caaaaaatct
     5341 ccatagccac gcccatataa aaggtagact ttccatcatg caagcaaaaa aacttaaaga
     5401 gattattaaa aaacttagtt ttgcaatatt ttcaagactt ataaattttc ttaagaagtt
     5461 aatgaaaaaa ctaccaaaaa tatacccaac taaaactgca atacccagct gaatgctttg
     5521 attttcattc aatctgccgg atattatcat aatagggatt aaaacaacat atccaaatct
     5581 tgccaaacca tttgccacaa aggttgaaag aaaacaaatc ataatgcgca agatcatgct
     5641 tgtgtccttt tgataagaga atctacagct ttatttgaat cgcaaagaaa tgtggaggca
     5701 atgtgagggc gaggcaaaat aaaagtataa aatttaattc cctctgtagg taatcccaaa
     5761 ataaataacc tatcaatagt tttattatct ttattaatag aacaaaagtt ttcgtcaatt
     5821 ttcaaacatt ctaattctaa atttccataa ttaaattttg tagctaaatt attagcgata
     5881 agagattgaa aaagtgcatt atcattaatt ttaatttcgt tgattcttgc gtcaattaat
     5941 ctatttacac aataagaatt gttaaatgag tcaactagtt gaaattgcgt attttctata
     6001 tgttttattg taacatcgtg taaaacattg acaacattag ctttaattaa agctaataat
     6061 tcttctattt taacaagtgg aggaccaaca cataatcgat tattgatagg aacaaacgag
     6121 tgaataaaga atttatatga ctcttcgtca agtcctccaa aatcgacaca taacctcaaa
     6181 ttgtctctaa catcacgtaa aacatcacaa gctgacttaa ttgggctttt taaattgccc
     6241 aagcgagctt cttttatatc attttctaaa taagtaatta attgagagta aaaatcttgc
     6301 ttatctatga ttttttgcaa tggattaacc aaagaataga aattaaactg atcacatttg
     6361 ggaatatatt tatcaagcac actttgtgta tcaatacttg taagatattc atttctaaat
     6421 aaaaaagaat cttcttgtga ttttaaattg atatatgtat aactatacac atattccatt
     6481 tctttaataa taagtggcaa gatttgcttt tcaaaattaa gttttttaaa ttcttttttt
     6541 aattttttaa tagtcgtgct attaaaaaat atagcttggt attgttctct agtctctttt
     6601 tgagtaattg ctcttgccat aagtggcaaa ttcgatctag aaaatacaaa aatttttggt
     6661 tctttacctg atggattata aattagttcg ttatttagtt tttcaaaaaa accaccattc
     6721 ccacttgtta gcattgtaat tacatctatg gcactaagtc ctaatccttt gatacctatt
     6781 gcatcattag cagaaatatt ttgagttgaa atttccaaag ggtaggctga atacatagga
     6841 aaattatttt gattttgatt atgtcctgtg gttataaaag cactatctac ttcaattttt
     6901 gtattttctc cagaaatgat aaaatatttt tcttgttgaa taatgcattg tgcatattct
     6961 ttgacgatat gtatagatat atcttgagaa cagagtttta aaatacattg aaaagaatgc
     7021 tcgagatatt ttcccaatag aactctagag taatatccat ttttatctgc tttatagcct
     7081 tttgataata gaaattcata gaaattagga cctttgatga aaaattcgtt aggacatatt
     7141 gtttcatcgg caaaaatagt catttgagaa gctacagtat tgactaacaa tctgctagat
     7201 tgcttaggac tatgacaacc gctaccaaga gaatttggat cgaaaatata aatttctaat
     7261 ttatcattaa taatttgacc aagtttcttt gagacaagcc tttctaaaat acttaaccct
     7321 ctaggaccaa aaccaattat tccaactctt aacatttatt ttcctttttt cttatgattt
     7381 tatagtatgc attatttgaa tattataaaa aatcacaaaa tttgcaaatt tttaaatcaa
     7441 ttgtaaa
//
LOCUS       DAQUWA010000080         7419 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.080, whole genome shotgun sequence.
ACCESSION   DAQUWA010000080 DAQUWA010000000
VERSION     DAQUWA010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7419
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.080"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            84..959
                     /gene="cmoB"
                     /locus_tag="R8X70_001613"
     CDS             84..959
                     /gene="cmoB"
                     /locus_tag="R8X70_001613"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HEF2929372.1"
                     /translation="MQENPLEKQFLNHPLFSKIQNLKEVELDSKLYLEDSVTLKTNSQ
                     AKKEILELTKELKPWRKGPFKIDELFIDTEWQSFIKFNILKPFMSEISQKCVADIGCN
                     NGYYMFKMLEFNPKKLIGFDPSIKYRLQFELINTLAKTPIKYELLGVEDLPKYGLKFD
                     VIFCLGVIYHRSDPIKMLKDLKVGLNKNGTVFLDTMYIEDPREIALVPNKTYSKIPNI
                     YFVPSISALKNWCERAGFKDFEVLATKTTDENEQRKTEWIDSFSLENFLDPNDKNLTI
                     EGYEAPKRVYVRIKV"
     gene            1036..1611
                     /locus_tag="R8X70_001614"
     CDS             1036..1611
                     /locus_tag="R8X70_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEF2929373.1"
                     /translation="MAKKDIFEEYAQLEEYASAEDISRVRAELLTCPELNTSLAGTII
                     ELDKNFAKSILITTSDMVVDEQGLVFDAFIFAAANYVAQASINKEFSVVIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEIKMFEATIQVVSIDEHIFKLKRPPL
                     NTAKAAENPDSPTSTVNPEAIGSALSASLRK"
     gene            complement(1616..1789)
                     /locus_tag="R8X70_001615"
     CDS             complement(1616..1789)
                     /locus_tag="R8X70_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929374.1"
                     /translation="MKKYILILALLFGISGCFVNERGISNRFYDDCHEYYDASGTYHK
                     DCPKNWVDIKMTP"
     gene            complement(1799..2326)
                     /locus_tag="R8X70_001616"
     CDS             complement(1799..2326)
                     /locus_tag="R8X70_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEF2929375.1"
                     /translation="MRINYKKLFNLRKIASDPKKLLAFLIFALMIAFVQNYIVQNPSF
                     KAQVIRVIDGDTIEISTNNKTSKIRFFGIDAPELKQNFGKQSKAALEKILKDKEVYIF
                     SKNKDNYGRIVAIVKLKDVDINQFLVSQGYAWADTYYTNAYIKEQEKAQKNKLGLWKD
                     DNPIEPYKWRKQNRF"
     gene            2383..3651
                     /locus_tag="R8X70_001617"
     CDS             2383..3651
                     /locus_tag="R8X70_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEF2929376.1"
                     /translation="MQNVIENFKNLCKIPHCSYQTEQMKEFLSSYAKDKGFKVSIDKA
                     GNIHAIKGNPKICLQSHYDMVCMGEAPKVEVYEENGFLRAKNSSLGADNGIGIAIMMS
                     AMAEFENLECLFTNDEEVGLMGVNSLEHTLSSKMLLNLDHESDDEIMIGCAGGVDIEA
                     ELSFSTLKARGKIYELQAQNFKGGHSGINIVRNEKSSIKEMAQFIKENKGKIISFEGG
                     ERINSIPKHAKALVHFENEVKGNGWIKCEFKKEGEFEICDQNEKLLNTINAFAHGVRA
                     YDEHLSIVQTSINLATLKMENQQIKFTLFARSNILDGLKQIEFETMEFFKAFGYKVRS
                     FNFYPPWEGKANALSDKVLKALKKVSPKARVSAIHAGLECGIIEKKQELLCASIGPNI
                     HNPHSTDEHCEITSVEKISRVVFEVLKDNA"
     gene            complement(3634..4881)
                     /locus_tag="R8X70_001618"
     CDS             complement(3634..4881)
                     /locus_tag="R8X70_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2929377.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDTFW
                     MQINAYIAFGAAYLARPFGSIVMAHFGDRYGRKNIFYISMLFMVLPSFALVFLPSYES
                     IGILATLILFLIRILQGLAVGTEVSGAWVYVSEFVKGRQVPLALGFISATLTIGLLLG
                     NLATLGIRSYFSAQEVEEYAWRIPFIVGGFFGFFALFLRTKLSETPEFERIKKENRLL
                     NFPLKDALKTYKTSMLVCFLMTVVLTSGVATLMILPKYLEELLSINKTSALWIQNFAI
                     LAVILGALIQGILASKWGSYRICSIFSITFMFFGMLFSFYDANFLFYFLLACFAQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYALLGFLTPFIVNAFYKEYMGVYLMVVGCCS
                     LFSVFLLKRIFARSEAKELSVVF"
     gene            complement(4924..5763)
                     /locus_tag="R8X70_001619"
     CDS             complement(4924..5763)
                     /locus_tag="R8X70_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEF2929378.1"
                     /translation="MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIG
                     VFGDKPPFGYVDEKGVNQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPERAEQVDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTAD
                     AYFTKEYPDIKTLKYDQNTETFAALIDQRGDALSHDNTLLFAWVKEHPEFKMAIKELG
                     NKDVIAPAVKKGDKELKEFIDNLITKLGEEQFFHKAYDETLKSHFGDDVKADDVVIEG
                     GKI"
     gene            5961..7064
                     /locus_tag="R8X70_001620"
     CDS             5961..7064
                     /locus_tag="R8X70_001620"
                     /inference="COORDINATES: protein motif:HMM:NF027978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929379.1"
                     /translation="MKKSIALTLGAIFFFSACSNSLDKTTVAKYEERLNTQINETLKD
                     FQQDMGVRIEISNFSCKGDGMFLRCSSPNFNVFAKDNTQTEQKLIEAKNLEIYSNEIY
                     TGEEQGLISLKDYYDNLLSKNKNLKTSFTLEGFKLGEKVISDINASLSQSDPKIQDYL
                     AKLSSGVFTLSFENSLFVKNSDYNNNFNMKINNQDLNFDMNLNFDYKQSLLDFFEKAG
                     IKYNTQTYAIDEKAVEELLDQQGFAQPIQESVILNNFKINSSLDTQGVFENYITIAKG
                     GLEALKIQSQNEEQTLLIDKALLALNEITKDEVYKLDLEAKFKPIALSDYPKEGINAV
                     EKLTVNNQDFTETLRILFGFMMIPIMLGGATGF"
     gene            7174..>7419
                     /locus_tag="R8X70_001621"
     CDS             7174..>7419
                     /locus_tag="R8X70_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEF2929380.1"
                     /translation="MKILFSPSESKNDTCKEKPIDKSSFIFENLFDFRMQAVKKYEEY
                     INNADLKALQELFGIKNENEISNFQRDLKNSPTQQAIT"
BASE COUNT         2786 a         1202 c         1085 g         2346 t
ORIGIN      
        1 attatatgta taattttaca tattttaacc tataatcaaa ttgtttttgt tattattcta
       61 aaattagatt atcaaggaaa aatatgcaag aaaatccact tgaaaaacaa tttttaaatc
      121 atcccctatt ttctaaaatt cagaatttga aagaagtcga actggattct aagctttatt
      181 tagaagatag tgttacccta aaaacaaact ctcaagcaaa aaaagaaatt ttagaactca
      241 caaaagaatt aaaaccatgg agaaaaggtc cttttaaaat agatgaactt tttatcgata
      301 cggaatggca aagctttatt aaattcaata tcttaaaacc ctttatgagt gaaatttctc
      361 aaaaatgtgt tgctgatatt ggttgcaata atggctatta tatgtttaaa atgcttgaat
      421 ttaatccaaa aaaacttata ggctttgatc cttcaatcaa atatcgctta caatttgaac
      481 tcataaatac tcttgctaaa actcctataa aatatgagct tttaggcgta gaagatttgc
      541 caaaatatgg gttgaaattt gatgtgattt tctgtcttgg agtgatttat cacagaagcg
      601 atcccataaa aatgctaaaa gatttaaagg tgggattaaa taaaaatgga actgtatttt
      661 tagataccat gtatatagaa gatccaagag aaattgccct agttcctaat aaaacctatt
      721 ctaaaatccc taatatttat tttgttccta gcattagcgc tttaaaaaat tggtgtgaaa
      781 gagcaggatt taaagatttt gaagtcctag ctacaaaaac aacagatgaa aatgaacaaa
      841 gaaaaacaga atggattgat tctttttctt tggaaaattt tttagatcca aacgataaaa
      901 acctcactat tgagggctat gaggcaccta aaagagtcta tgttcgcata aaggtataaa
      961 ttttttaatt actaagccga tatagcatca agaaatgttt tgaagtagat aatatagaac
     1021 accaaaggcg caaaaatggc aaaaaaagat atttttgaag aatatgcaca acttgaagaa
     1081 tatgcatccg ctgaggatat ctctcgtgta agagctgaac ttttaacttg tccagaactc
     1141 aacacctcct tagcaggaac tattatcgag cttgataaaa attttgcaaa gtcgatactc
     1201 atcactacaa gcgatatggt tgtagatgaa caagggttag tttttgatgc ttttattttt
     1261 gctgctgcaa actatgtcgc acaagcttca atcaataaag aattctctgt tgttatcggt
     1321 tcaaaatgtt tcttttatgc tccacttaaa ttaggcgatg ttttagaact tgaagctcat
     1381 gctttgtttg atgaaacttc taaaaagcga gatgtaaaag ttgtaggaca tgtaaaagag
     1441 attaaaatgt ttgaagcaac catacaagtt gttagtatag atgagcatat atttaaactc
     1501 aagcgacctc ctcttaatac agccaaagca gcagaaaatc ctgattcccc aacaagcaca
     1561 gtaaatcctg aagcgatagg atcagcatta tcagcatctt tacgcaaata aatcatcaag
     1621 gagtcatttt aatatctacc caatttttag ggcagtcctt atgataagtt ccacttgcat
     1681 cataatattc atggcaatca tcataaaacc gatttgaaat gcctctttca tttacaaaac
     1741 atcctgatat tccaaaaagc aaagctagta ttaaaatata ttttttcatt acctgccttt
     1801 aaaatctatt ttgtttgcgc catttataag gctctattgg attatcatct ttccaaagac
     1861 ccagtttatt tttttgagct ttttcttgct ctttaatata agcattggtg taatatgtat
     1921 ccgcccaagc atatccttga ctcactaaaa actgattaat atccacatct ttaagcttta
     1981 caatagcgac aattctacca taattatctt tgtttttaga aaaaatataa acttccttat
     2041 cttttaaaat tttctcaagt gctgcttttg attgtttgcc aaaattttgc tttaactcag
     2101 gcgcatctat gccaaaaaat cgtattttac tggttttatt gttggtacta atttctatgg
     2161 tatcaccatc aatcacccta atcacttgag ctttaaaact aggattttgt actatataat
     2221 tttgtacaaa agcgatcatt aaagcaaaaa tcaaaaatgc taaaagtttc ttaggatcgc
     2281 ttgcaatttt tcttaaattg aataattttt tataatttat tctcattatt tccttaaatt
     2341 tttaaaaata tgccataatt ttaacaaaaa aaaggagata gaatgcaaaa tgttatagaa
     2401 aattttaaaa atttgtgcaa gattccacat tgtagctatc aaacagaaca aatgaaagaa
     2461 tttttaagct cctatgctaa agataaaggc tttaaagtaa gcatagataa agcaggaaat
     2521 attcacgcta ttaaaggaaa tcctaaaatt tgcctccaaa gtcattatga tatggtttgc
     2581 atgggagaag ctccaaaagt agaagtatat gaagaaaatg gctttttaag agctaaaaat
     2641 tcaagtcttg gagcggataa tggcatagga atagccatta tgatgagcgc tatggctgaa
     2701 tttgaaaatc tagaatgcct ttttacaaat gatgaggaag tcggactcat gggagtaaat
     2761 tcactcgagc acactttaag ttccaaaatg cttttaaatt tagaccatga aagcgatgat
     2821 gagatcatga taggttgtgc aggtggagta gatatagaag ctgagctaag ctttagcact
     2881 cttaaagcaa gaggtaaaat ttatgaactt caagcacaaa attttaaagg gggacattca
     2941 gggatcaata tcgtgcgcaa tgaaaaaagt tctatcaagg aaatggctca atttatcaaa
     3001 gaaaataaag gaaaaatcat ctcttttgaa ggtggagaaa ggataaattc tatccctaag
     3061 catgctaaag ccttggtgca ttttgaaaat gaagtaaaag gcaatgggtg gataaaatgc
     3121 gaatttaaaa aagaaggtga atttgaaatt tgcgatcaaa atgaaaagct tttaaatacc
     3181 atcaatgctt tcgcacatgg agttagagct tatgatgaac atttgagcat agtgcaaact
     3241 agcatcaacc tagccacttt aaaaatggaa aatcaacaaa tcaaatttac actttttgca
     3301 agatctaata tattagatgg tttaaaacag atagaatttg aaaccatgga attttttaaa
     3361 gcttttggct ataaagtaag aagttttaat ttttatcccc cttgggaagg caaagctaat
     3421 gcactgagcg ataaagtgct aaaagctctt aaaaaagtat cgcccaaagc tagagtttcg
     3481 gctatccatg caggattaga atgcggcatc atagaaaaaa aacaagaact tttatgtgct
     3541 tctatagggc caaatatcca caatccccac tcaactgatg agcactgcga aatcacttcg
     3601 gtagaaaaaa tatctagagt tgtttttgaa gttttaaaag acaacgctta gttcttttgc
     3661 ctcgctcctt gcaaaaatac gcttaagtaa aaatacgcta aataaggagc agcatcctac
     3721 caccataaga tagacaccca tatattcttt ataaaaagca ttgactataa aaggggttaa
     3781 aaagcctaaa agtgcataag aaatattata agcaaagcta agtccactga atttaagttc
     3841 acttttgaaa atttgagtca taaaaacagg agcaaaagta ataattcctt gagcaaaaca
     3901 agcaagtaaa aaataaaata agaaatttgc atcataaaaa ctaaaaagca tgccaaaaaa
     3961 cataaaagtt atgctaaaaa tagaacaaat tctataactt ccccacttgc tagccaaaat
     4021 tccttgaatc aatgccccta aaataacagc caaaatagcg aaattttgta tccataaagc
     4081 cgaggtttta tttatagaca ataactcttc aagatatttt ggaagtatca tcaaagttgc
     4141 tacaccgctg gttaaaacaa cggtcattaa aaagcatact aacatgcttg ttttataagt
     4201 tttaagtgcg tcctttaaag gaaaatttaa aagtctattt tcttttttta ttctttcaaa
     4261 ttcaggagtt tcgctaagtt ttgttcttaa aaataaggca aaaaatccaa aaaatcctcc
     4321 tacaataaaa ggaattctcc aagcatactc ttcaacctct tgcgcgctaa aataagatct
     4381 tatccctaaa gtggcaagat ttcctagcaa taaacctata gtcaaagttg ctgaaataaa
     4441 acctaaagct aaaggaactt gacgcccttt aacaaattca cttacatata cccaagctcc
     4501 acttacttct gtccctacag ctaagccttg taaaatgcga attaaaaata aaatcaatgt
     4561 agcaagtata cctatactct catagcttgg caaaaacacc aaagcaaaac taggcaaaac
     4621 cataaaaagc atagatatgt aaaaaatatt tttacgcccg tatctatcgc caaaatgcgc
     4681 cataacaata gatccaaaag gacgcgccaa ataagcagca ccaaaggcta tataagcatt
     4741 tatttgcatc caaaaagtat cattttgagg aaagaaaacc ttagcaaaaa tatccaaaaa
     4801 aaaggcaaag agcacaaaat cataaaattc taaaattccg cccaaagaag cataaattat
     4861 atttttgtat tttttttgca tattttatcc taaatcaact aaagggcaaa agcccttttt
     4921 ttgtcaaatt ttaccgcctt caataactac atcatcggct tttacatcat ctccaaaatg
     4981 actttttaaa gtttcatcat aagctttatg gaagaattgt tcttctccta attttgtgat
     5041 tagattatca ataaattctt taagctcttt atcacctttt ttaacagcag gagcaattac
     5101 atctttattg cccaattctt taatggccat tttaaattca ggatgttctt ttacccacgc
     5161 aaaaagcaaa gtattgtcat gacttaaagc atcacctctt tgatctatta aagcggcaaa
     5221 agtttcggta ttttgatcgt attttaatgt tttaatatca ggatattctt ttgtaaaata
     5281 cgcatcagca gtagttcctt tgtttaaaag taaagtttta tcttttaaat cttctatgct
     5341 actgatattg ctatcttgag gcacagccac acctaaagct accttcatat aaggtaagca
     5401 aaaatccact tgctctgctc tttcaggtgt ttgagtaaaa ttagctaaaa taatatcaac
     5461 tttatttgat tttaaaaatt ccaccctatt tgcagcttca actaatacaa actgcacctt
     5521 attttcatct cctaagagtt cttttgctat acgtttcgcc aagactatat cataaccttg
     5581 atttacgcct ttttcatcta cataaccaaa aggcggttta tctccaaaaa ctcctattct
     5641 tactactcca tcttgcttga ttctttcaag agaatttgaa gcaccagaat ctgaatttcc
     5701 tccacaagca gccaaaaata ctgcaacaaa ggttgtaaaa atacttaaga gcattttttt
     5761 catacttttc ctttcttggt ataaacccta atttattttg caaaaaatgc aaaagcatta
     5821 tactttaaaa aaaagcatat ttcaattttt taagataaaa ttatttcttc ttgtgtaaaa
     5881 aagtaatatc aatatcaaag cataaaaatt taagtataag attgttataa tttataaaac
     5941 tatattaagg agaagatttt atgaaaaaaa gtattgctct aaccctaggt gctatatttt
     6001 tcttttcagc gtgcagcaac tcgcttgata aaacaacagt tgcaaaatat gaggagcgtc
     6061 ttaacactca aataaatgaa acccttaagg attttcaaca agatatgggt gtaagaatag
     6121 aaatttctaa tttttcttgt aaaggcgatg gaatgtttct tagatgttca agccctaatt
     6181 ttaatgtttt tgcaaaagac aatacccaaa cagagcaaaa actcatcgaa gcaaaaaatt
     6241 tagaaattta ttctaatgaa atttacacag gagaggagca aggcttaatc tctttaaaag
     6301 attattacga taatctattg agtaaaaata aaaatttaaa aacaagtttt accctagaag
     6361 gatttaaact tggagaaaaa gtaatcagcg atatcaatgc aagcttatct caaagcgatc
     6421 caaagattca agattatctc gctaaactta gttcgggtgt ctttacactt tcatttgaaa
     6481 attcactttt tgtaaaaaat agcgattata ataacaattt caacatgaaa ataaacaatc
     6541 aagacttaaa tttcgatatg aatttaaatt ttgactacaa acaaagcttg cttgatttct
     6601 tcgaaaaagc aggaattaag tacaatacac aaacctatgc aatagatgaa aaagccgtag
     6661 aagaacttct agatcagcaa ggatttgctc aacctataca agaaagcgtt atcttaaata
     6721 attttaaaat taactcttct ttagataccc agggtgtttt tgaaaattat ataacaatcg
     6781 ctaaaggtgg cctagaagct cttaaaattc aaagtcaaaa tgaagaacaa accttgctta
     6841 tagataaagc tttgttggct ctaaatgaaa tcacaaaaga tgaagtctat aaacttgatt
     6901 tagaagctaa atttaaacct attgcattaa gtgattatcc taaagaaggt attaacgcag
     6961 tagaaaagct aactgttaac aatcaagact ttacagaaac acttagaata ctttttggct
     7021 ttatgatgat acctataatg cttggaggtg caacaggctt ttaagtaata tggagagaaa
     7081 tctccatata ctcttttacc ttttttaagc ctagttttat atatttttcg atatttttta
     7141 gtctttaatt ttaaagattt aaaaaggaca aaattgaaaa ttttattctc tcctagcgaa
     7201 agcaaaaacg atacttgcaa agaaaaacct atagataaaa gctcttttat atttgaaaat
     7261 ttatttgatt ttagaatgca agctgtaaaa aaatatgaag aatatatcaa taacgctgat
     7321 ttgaaagcct tgcaagaact ttttggtata aaaaatgaaa atgaaatttc taattttcaa
     7381 agagatttaa aaaattctcc tacccaacaa gctataacg
//
LOCUS       DAQUWA010000081         7259 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.081, whole genome shotgun sequence.
ACCESSION   DAQUWA010000081 DAQUWA010000000
VERSION     DAQUWA010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7259
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.081"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..1243)
                     /locus_tag="R8X70_001622"
     CDS             complement(<1..1243)
                     /locus_tag="R8X70_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEF2929381.1"
                     /translation="MLRQKTTQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEENP
                     FLSVQEPIQTHEHNKNYFDSFYKRNANSAFVDNKGLATKSVYELLNEQIIPPLFPTSK
                     SQELAGKIVECLNHEGYFEYDEEILKDYDINELERIRARFKFLDPVGVGAKDYKEAFL
                     FALENIELDAELYDFCKMLIQDFENIQNYTKEPLYKEALAIFKRFSIPPFLEYFEDSR
                     VIIPDIFVYRENNEIKVKINDDYYPEISIETDGLTHEYLNHYIKEAKNLVDALMMRKA
                     TLYKIGLMIVEYQYDFFMGKDIKPMTFKDLALDLERNASTISRAVANKYLSCDRGLIP
                     LRDFFAFALDEEGETSNVGVKDFVANLVKNENRSKPLSDSKILELIKKEFKVDIGRRT
                     ITKYRKHLNIPSSTDRKKLYEL"
     gene            complement(1243..1971)
                     /gene="lptB"
                     /locus_tag="R8X70_001623"
     CDS             complement(1243..1971)
                     /gene="lptB"
                     /locus_tag="R8X70_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEF2929382.1"
                     /translation="MSKLEIVNLEKIIKKTKIIQGISLELNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDITKEPLNKRARLGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHEKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQSLINELKKLDIGILITDHNVRETLAICDRAYVIRSGSLLASG
                     NAEEIANNKDVKKYYLGAEFKLLD"
     gene            complement(1964..2371)
                     /gene="tsaE"
                     /locus_tag="R8X70_001624"
     CDS             complement(1964..2371)
                     /gene="tsaE"
                     /locus_tag="R8X70_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEF2929383.1"
                     /translation="MKEFILAKNELNTMLQTLPKQGVVLLQGELASGKTSLVQAWVSF
                     LNLDEKVDSPTFSIMQKYENQDICIYHYDIYQEGLEGLLKNGLFENFFEEGLHLVEWG
                     DENLKKALLKLGIPSLEIKISVEDDKRKYVIHE"
     gene            complement(2368..2613)
                     /locus_tag="R8X70_001625"
     CDS             complement(2368..2613)
                     /locus_tag="R8X70_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEF2929384.1"
                     /translation="MRVDKFLNAVNITKRRAISEDMCRSGVVGINGVIVKASKEVKVG
                     DIISLHFTDYTQEYKVLALPTTKNIPKNAQSEYVVKL"
     gene            2753..3973
                     /locus_tag="R8X70_001626"
     CDS             2753..3973
                     /locus_tag="R8X70_001626"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEF2929385.1"
                     /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENVFIKDLREEFVKDYVFPMFRANTIYEGEYLLGTSIARPLI
                     AKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKL
                     LAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPEEDMWRWSKSPKEAP
                     NESEIIELDFQKGDLVAINGEHLSPAGLLSKLNELGAKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRAIESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALI
                     DESQKHANGRVKLELYKGNVMVIGRESANDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            3989..4432
                     /locus_tag="R8X70_001627"
     CDS             3989..4432
                     /locus_tag="R8X70_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEF2929386.1"
                     /translation="MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFELASLEKLKEELSKVTLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTLKSLGVHEVSVKLGHAIHAKFNINIKAE"
     gene            4432..4974
                     /gene="hslV"
                     /locus_tag="R8X70_001628"
     CDS             4432..4974
                     /gene="hslV"
                     /locus_tag="R8X70_001628"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEF2929387.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDEQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            4971..6290
                     /gene="hslU"
                     /locus_tag="R8X70_001629"
     CDS             4971..6290
                     /gene="hslU"
                     /locus_tag="R8X70_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEF2929388.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESVIEIEISQSMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAAEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRD
                     LLPIVEGSSVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYEQLLKTENLELEFDDEAIKEIAKIASKANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
     gene            6287..7162
                     /gene="era"
                     /locus_tag="R8X70_001630"
     CDS             6287..7162
                     /gene="era"
                     /locus_tag="R8X70_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEF2929389.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKA
                     IVMNGEDQIIFIDTPGLHESKATLNQFLIQSAIKSMGDCDVILFVASIFDSVKDYENF
                     LSLNPKVPHIIVLNKVDLADNGTLLKKLNEYAKFSKYFKAILPYSCKKKNYQKPLLNE
                     LCKLLPEHEYFYDSEFLTPSSQKDIFREFILESIYENLSEELPYSCEIMIKNTKDTSN
                     LFIIDAQIITDTNSHKAMLIGKDGTTLKRIGKDARFKISKLIQNKVLLKLFVIVKKNW
                     QKDEIFLKKILNYEE"
BASE COUNT         2613 a         1168 c         1212 g         2266 t
ORIGIN      
        1 caagttcgta taattttttt ctatccgttg aacttggtat atttaagtgt ttgcgatatt
       61 tagtaatagt gcgtcgtcct atatcgactt taaattcttt tttaatcaac tctaggattt
      121 tactatcact taaaggtttt gagcgatttt catttttaac caaatttgca acaaaatcct
      181 taacgcccac atttgaagtc tcgccctctt catcaagtgc aaaagcaaaa aaatcacgca
      241 aagggataag ccctctatca caacttaggt atttatttgc cactgctctt gaaatagttg
      301 aagcattgcg ctctaaatca agagctaagt ctttaaaagt cataggttta atatccttac
      361 ccatgaaaaa atcgtattgg tattctacta tcatgagtcc tattttataa agcgttgctt
      421 ttctcatcat taaagcatca actaaatttt ttgcttcttt gatgtagtga tttaagtatt
      481 cgtgagttaa accatcagtt tcaatggaaa tttcaggata ataatcatca ttgattttta
      541 ccttgatttc attattttcc ctataaacaa agatatcggg tataataaca cgagaatctt
      601 caaaatactc caaaaaaggc ggtatgctaa aacgcttaaa aatcgctaat gcttccttat
      661 ataaaggctc tttagtgtaa ttttgtatat tttcaaaatc ctgaataagc attttacaaa
      721 aatcataaag ctctgcatca agttctatat tttctagcgc aaataaaaaa gcttctttat
      781 aatcttttgc tcccactccc acaggatcaa gaaatttaaa tcttgctctt atgcgctcta
      841 attcatttat atcataatct tttaaaattt cttcatcgta ttcaaaatat ccctcatgat
      901 ttaaacattc tacgattttg cctgcaagtt cttgagattt acttgtagga aaaagagggg
      961 gtataatctg ttcattaaga agttcatata cgctttttgt ggcaagacct ttattatcca
     1021 caaatgccga atttgcgttg cgtttataaa aagaatcaaa ataattttta ttatgctcgt
     1081 gtgtttgaat gggttcttga acgcttaaaa aagggttttc ttctgcgaat ttgtctaaat
     1141 tttcttttaa atcttctata tttgcttgta atataggcaa ccacgaacgc agagtttgag
     1201 aaatcttagt tttaggagcc tgggtagtct tttgccttaa catcaatcaa ggagtttaaa
     1261 ctccgctcct aaataatatt ttttaacatc tttattattt gctatttctt cagcatttcc
     1321 acttgcaagt aaagagcctg atcttattac ataagctcta tcgcaaattg ctaaagtttc
     1381 gcgaacatta tgatcagtaa ttaaaattcc aatatcaagc tttttaagct cattgataag
     1441 actttgaatt tcagccactg caataggatc cacccccgca aaaggctcat caagaagcaa
     1501 aaatttaggc tcacacatca aagatcttgc aatttcacat cgtcttcttt ctccaccgct
     1561 taagcttaag ccttttctta agcgaatagg ttctatactt aaaagctcga gcatttgctc
     1621 cactttttca tgtaaaattt tcttatcctt gtaaaaaatt tgagcagcta aaagcaaatt
     1681 atcttcaacg cttaaatcct taaaaatact gctttcttga ggtaagtaac ctatgcctag
     1741 ccttgctcgt ttatttaaag gctctttagt aatatccaaa ccatctaaaa gcacttttcc
     1801 actacttgga gatattagtc cacatatcat ataaaatgta gttgtttttc ctgctccatt
     1861 aggccctaaa agtcccacaa cctcaccact atttaattct aaggatatgc cttggataat
     1921 ctttgttttt ttaataattt tttctaaatt tacaatttct agtttactca tgaattacat
     1981 actttctttt atcatcttct acactgattt ttatttccaa gctaggaatt ccaagtttta
     2041 gcaaagcttt ttttaaattc tcatctcccc attcaaccaa atgtaaaccc tcttcaaaaa
     2101 aattctcaaa caaaccattt tttaaaagtc cttctaaacc ctcttgatat atatcataat
     2161 gataaatgca tatatcttga ttttcatatt tttgcatgat agaaaaggtg ggagaatcta
     2221 ctttctcatc taaatttaaa aaactaaccc aagcttgcac taggcttgtt ttaccactag
     2281 ctaattctcc ttgtaataaa acaacacctt gttttggtaa agtttgaagc atggtattga
     2341 gttcattttt agctagaata aattctttca taacttcacc acatattcac tttgtgcatt
     2401 ttttggaata tttttagtag tgggcaaagc taaaacctta tattcttgcg tataatcagt
     2461 aaaatgcaaa ctgataatat ctcctacctt aacctctttg ctcgccttta ctatcactcc
     2521 gttaatcccc actacaccac ttctacacat atcttcagaa atagctcttc ttttagtaat
     2581 attaaccgca tttaaaaatt tatctactct cataatggaa ttttaccaaa aaaattaaat
     2641 ttttgaaacc cattttgctt tgactaactt ttcttcatca atttaaaaac ttttctttaa
     2701 tgaattttag atacaatttg acaattaaat caatattgac aaaggatact ctatgaaaaa
     2761 tgaagtaaaa aaagtcgttt tggcatattc tggcggactt gatacaagta ttattttaaa
     2821 atggcttcaa gatgaataca aatgcgaagt agtaactttt acagcagata ttggacaggg
     2881 cgaagagctc gaacctgcta gaaaaaaagc tctttcatta gggattaaag aagaaaatgt
     2941 tttcattaaa gatttaagag aagaatttgt taaagattat gtatttccta tgtttagagc
     3001 caatactatt tatgagggtg aatacttact tggaactagc atagcaagac ctttgattgc
     3061 aaaaactcaa gcacaaattg ccctgcaaac aggagctgat gcggtaagtc atggggctac
     3121 gggaaaagga aatgatcagg tgcgttttga attaggttat ttagccttta atcctgactt
     3181 aaaaatcatt gctccttggc gtgaatggga tttaaatagc cgcgaaaaac tcttagctta
     3241 tgcgcaaaaa catggtattg atatttctaa gaaaaaaggg aaatctcctt attctatgga
     3301 tgcaaatttg cttcatattt cttatgaagg acttgtttta gaagatcctg cacacgcacc
     3361 tgaagaggat atgtggagat ggagtaaaag tccaaaagaa gcaccgaatg aaagtgagat
     3421 tatagaactt gattttcaaa agggagattt agttgccatc aatggagagc atttaagccc
     3481 tgctgggctt ttaagcaagc ttaatgagct tggtgcaaaa catggcatag gacgccttga
     3541 tatagtagaa aatcgctatg taggaatgaa aagtcgtggc tgctatgaaa caccaggagg
     3601 aactatactc ttaaaagcac accgtgcaat tgaaagcatc acactagata gagaagctgc
     3661 gcatttaaaa gatgaactta tgccaaaata tgcaagtttg atttataatg gttattggtt
     3721 ctcgcctgaa agaatgatgc ttcaagctct aatcgacgaa tctcaaaaac atgccaatgg
     3781 tagagtaaaa cttgaacttt acaaaggtaa tgtaatggtt ataggccgag aaagtgctaa
     3841 tgatagttta tttaatgcag cttattgtac ctttgaagaa gatgaagtgt ataatcaaaa
     3901 agacgcagca ggttttatca aactgaatgc tttgcgtttt attattgcag gaaaaaatgg
     3961 aagaaaattt taaacaagga ttaaaaaaat gaaagtatta ttaatcaaag atgttaaagc
     4021 tcttggaaaa gcaggtgaaa tcaaagaagt aaaagatggc tatggtcaaa attttctcat
     4081 tgctaaaggc tttgctaagg cagcaacaaa tgaagtttta agaaaatatg aaagtgacaa
     4141 gaaaaaagaa gcagagaatt tacgcttcga acttgcaagc ttagaaaagc taaaagaaga
     4201 gcttagtaaa gttacacttg aaatttcaaa gcctgtagga gctaatggaa gtttatttgg
     4261 cggggtaact aaagatgaaa tcgcccatgc tttaaaagaa caaagccata tagaaatcga
     4321 taaaaaaagc ttggagtgtg ataccctaaa aagccttggc gttcatgaag tcagcgttaa
     4381 attaggtcat gctatccacg caaaatttaa tataaacata aaggctgaat aatgtttcat
     4441 gcaacaacta ttttagctta caaaggcaaa aacaaatccg taatcggtgg agatggccaa
     4501 gtaagctttg gcaatactgt tttaaaaggc aatgcagtaa aaataagaaa actcaacaac
     4561 ggcaaagttt tagcaggttt tgcaggatca acagctgatg cttttaatct ttttgatatg
     4621 tttgaaaatc tacttcaaag ctctaagggt gatcttttaa aagcagcgat tgatttttct
     4681 aaagaatggc gaaaggataa atatctaaga aaactcgaag ctatgatgct agtacttgat
     4741 agaaatcata ttttcttact ttcaggcaca ggcgatgtag tcgagcccga agatgaacaa
     4801 attgctgcca taggaagcgg tggaaattac gcgctttcag cagctagagc tttggcaaaa
     4861 catgcaaatt tggatgaaga agaactagtc aaatcaagtc ttcaaatcgc gggtgaaatt
     4921 tgcatttata ccaataccaa tataaaaact tatgtaattg aggatgaaaa atgaatttaa
     4981 ctcctaaaga aatcgttaaa tttttagatg attatgtcat aggacaaaaa aaagctaaaa
     5041 aaattatagc aatagcccta agaaaccgct accgaagaat gcagcttagc cctgaactcc
     5101 aagatgatat agtgccaaaa aatatcctta tgataggatc aacgggtgtg ggtaagactg
     5161 aaattgcaag gcgtttggct aagatgatgg gctttccttt tattaaaatc gaagcgagta
     5221 aatacacaga ggtaggcttt gtaggtcgtg atgtagaaag catggtaaga gatcttgcaa
     5281 atgcagcttt aaatttggta aaaaatgaac aaagagaaaa aaataaagat aaaatcgatg
     5341 aatttataga aaataaaatt ttagaaaaac ttcttccccc tttacctaaa ggcatcagtg
     5401 atgaaaaaca agaagaatat aaaaatagcc ttgaaaaaat gaggacaaaa cttagaaatg
     5461 gggatttaga tgaaagcgtg atagagatag aaatttcaca aagcatgttt gatacaaatc
     5521 ctaatttacc gcctgaaatg ggagcaatgc aagatatagt taaagttata ggcgttggca
     5581 gtaaaaaagt caaaaaagaa atgaaaatta aagatgctaa aaatgccctt aaaaatgaag
     5641 cagcagagaa gattttagat caagaaagca tcaaaagtga agctttaaaa agagcggaaa
     5701 atgaaggaat tatttttata gatgagattg ataaaattgc ggtttcaagt ggaaattcaa
     5761 atcgccaaga tccaagcaaa gagggtgttc aaagagattt acttcctata gttgaaggct
     5821 caagcgtaca aacaaagatc ggcactttaa aaaccgatca tatccttttt atcgcagcag
     5881 gagctttcca tcttagcaaa ccaagcgatt taatccctga acttcaaggt cgttttcctt
     5941 taagagtaga gctagatagt cttgatgata aagcacttta tgaaattcta acacgcccta
     6001 aaaattcact tttaaaacaa tatgaacagc ttttaaaaac tgagaattta gaacttgaat
     6061 ttgatgatga agcgattaaa gagattgcaa aaattgcttc taaagccaat gaagaaatgc
     6121 aagatatagg tgctagacgt ttgcatacag ttatagaaaa attgcttgaa gatttaagct
     6181 ttgaagcaga tgagtatgcg ggtaaaaaat tcgtagttga taaaaaaatg gtggaagaaa
     6241 aacttggaga tattatagaa aataaagatc ttgcaaggta tattttgtga aaagtggctt
     6301 tgttagcatc atagggcgta ccaatgcggg aaaaagcact ttaattaatt ccttgctaga
     6361 agaaaaaatc gccctagttt ctcacaaaca aaatgccaca aggcgtaaaa tcaaagctat
     6421 agtcatgaat ggtgaagatc agatcatctt tatagataca cctggtcttc atgaaagcaa
     6481 agcaacgctt aatcaatttc ttatccaaag cgctataaaa tctatgggtg attgcgatgt
     6541 tatcttgttt gttgctagta tttttgatag tgtaaaagat tatgaaaatt tcctaagctt
     6601 aaaccctaaa gttcctcata tcatcgttct taacaaagta gatctagctg ataatggcac
     6661 acttttaaaa aaactcaatg aatatgcaaa atttagcaag tattttaaag ctatcttgcc
     6721 ctattcttgc aagaaaaaaa actaccaaaa accactgcta aatgagttgt gcaagctctt
     6781 acctgaacat gagtattttt atgatagtga atttttaaca cctagttctc aaaaagatat
     6841 ttttagagaa tttatacttg aaagtattta tgaaaattta agcgaagaat tgccttattc
     6901 ttgtgaaatt atgataaaaa ataccaaaga cacatccaat ctttttatca ttgatgcgca
     6961 aattatcacc gatacaaatt cccataaagc catgcttata ggaaaagatg gaacgacgct
     7021 taaaagaata ggaaaagatg cgagatttaa aatttcaaaa ctcattcaaa acaaagtact
     7081 cttaaaactt tttgtcattg taaagaaaaa ttggcaaaaa gatgaaattt ttcttaaaaa
     7141 aattctaaat tatgaagaat aaagctcatt ttataagttt tgaaaatctt atctacaaac
     7201 aaaaaaatgg caattttgaa gaagatgacc tttttaaaga gctaacaaaa gaatgcgat
//
LOCUS       DAQUWA010000082         7175 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.082, whole genome shotgun sequence.
ACCESSION   DAQUWA010000082 DAQUWA010000000
VERSION     DAQUWA010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7175
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.082"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            16..798
                     /locus_tag="R8X70_001631"
     CDS             16..798
                     /locus_tag="R8X70_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2929390.1"
                     /translation="MLNVIHALFFRELKTRFGKNKYLGYFWVIGEPMSVILILTTIVT
                     ILREYHHQLMPEGISVFMFLISGIVPYFMFRSIVTQLMNGIGANLALFAYKPVKPIHV
                     FIARTLLEFCIYFVIFVAVLFIVGWFFRLEVIPRHFLSVMICIFLLMCSGFALGMVFA
                     IIGYFLEPLKTLLNYFSIVFYWGSGVIFPTWLMPKPILDILYYNPLLHVMELLRFNFF
                     ENYPLQDDYTYTYPIFCIICTSFVGLFLYYYNRQALTAVRRT"
     gene            795..1457
                     /locus_tag="R8X70_001632"
     CDS             795..1457
                     /locus_tag="R8X70_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002797192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2929391.1"
                     /translation="MIKVLNLTKSYPLFNGGRHYVFKDFTFEFPENCSIGLMGRNGAG
                     KSTLMKLLSGSELPDRGKIITNKKFSWPLGLSGAFQGSLTARDNAKFVARVYGYKGKE
                     LYEKVKFVEDFAELGKFFDEPMNTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPK
                     FREKSHKLYKERLSQSKVIMVSHNVAEIKEWCDKIIFMENGKATVYDDVDEGIAVYQG
                     KK"
     gene            1457..2572
                     /locus_tag="R8X70_001633"
     CDS             1457..2572
                     /locus_tag="R8X70_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002835136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEF2929392.1"
                     /translation="MTKINTFFNKIKDLSIFDSFKIVWILMIFVIIYYILIAADRYVS
                     TITMSVKSTTGSTQASGVLSLLTATSNTSEDIKFLQGYIESLDMLKILDEKIHLKKLY
                     NEQYIDLFYSLSSSSSIESYLKYYQSRVKVHVDDKTGLLNVEVEGFTPESAHLIAKTI
                     MQESEKFINEISHKAAREQMAFAEEELVKYKERYQKAQNDLIAFQNKYGVFDPLKQAE
                     AKAGLVTQLESDIAQREAKLLTMQSYMNDHAPEIVTLKAEITALKKQLVKERSKISAD
                     NSSQKLNDLAAKFQDLTIEAGFAQSAYEAALKAYESARIEALRKIKQLVIVQTPDVPQ
                     SAKYPEKIYNILTAFIVLSLIFGVIKFVKMIIEEHKY"
     gene            2574..4205
                     /locus_tag="R8X70_001634"
     CDS             2574..4205
                     /locus_tag="R8X70_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HEF2929393.1"
                     /translation="MKKILILFLSCIFCFGAIDVSQISSSGNSSTTSFVQGLENNISK
                     STPTQIPVFGAELFNGNFKNYTQRVYNPDYKIAVGDQISLKIWGAVEFEQILVVDSQG
                     NIFIPKVGAVNLLGVKNSALVSVIKAQVNKIYKNNVFVYADMNAYQNVSVFVTGSVNA
                     PGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNAVIKKIDLYDFLLKGQMDLF
                     PFRSGDVVLVGNVQSYVFVNGDVQRPFRFELANDIKTLFDLARVAGAKPIVTNAILRS
                     YGNDHKLEVSAYNKMQFSKVLLKTGDEVQFNPEYISQNISITVNGEHSGLKTLVVRKG
                     TTLEDVSRLIVANGQSDMNALQVFRKSVAKTQKDLINAQLKELETLALTSPSVTSQGA
                     AIKAEQAKLILEFIQRAKELEPKGQIVIDKPKSYGEVILEEGDTINVPSKNNLIIVQG
                     EVTLPGAFVYNRGEDLKYYINLAGGYGERADTSKVLVIRNNGKAQRYSGSVDMMPGDS
                     VLVLPKVESENLQIFSMLTQILYQIAVATNVVLNL"
     gene            4232..5179
                     /locus_tag="R8X70_001635"
     CDS             4232..5179
                     /locus_tag="R8X70_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEF2929394.1"
                     /translation="MDTLKIAKEVFATEAKAIEDLALNLDENFSKAIELMLHTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPDDILIAISNSGETEE
                     ILKIIPAIKKRKIPLIAMCGKENSTLVKQGDIFLNISVKEEACPLQLAPMSSTTATLV
                     MGDALAAALMKARNFRPDDFALFHPGGSLGRKLLTRVSDLMVSKNLPIVHPDTEFNDL
                     VDVMTSGKLGLCLVLENEKLIGIITDGDLRRALKANDKPRFDFKAKEIMSINPKVVDA
                     DAMASEAEEIMLKYKIKEIVVSKEDKVVGIIQLYAIGNV"
     gene            5180..6157
                     /locus_tag="R8X70_001636"
     CDS             5180..6157
                     /locus_tag="R8X70_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HEF2929395.1"
                     /translation="MKYKYSVIIPIDLDLRPFDILKKVKSILKRSSDEVEIVFGHNDR
                     GSIFDKYLKRITEKNNVKLVSGKFYTRLICQSLLRNRAVEQCSSEFIYLMDVDCLFDE
                     ELSDGCINDIKSDKNPLIILFCLYLSKKGSREVFKHTREEMFDKYIAFRKDLYLHLAS
                     PSASIFMKKTDYFAVGGFDEEFMGHGGEDFEFMIKLALYKNVIKPTKDLMLNKFYKAP
                     LLSEGFRKYLAFNGLPYFFDKKIVFHLHHRRNKLFGYFKQYHKNSNLLQEKIKLDSSL
                     EENEESLIEFYEQLCKKYDVSIDKYSVLFDSYKPKKFTLDHILLFLKRL"
     gene            6158..>7175
                     /locus_tag="R8X70_001637"
     CDS             6158..>7175
                     /locus_tag="R8X70_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEF2929396.1"
                     /translation="MLKLSNENKKFIKVILDGFFRIYLAKLFSNFKPKKHKGFTQYAI
                     ISAVYNVEKYLDDYFKSIINQRLDFKKNIFMILVDDGSTDNSAQIIKKYQKKYPKNIV
                     YLYKENGGQASARNLGLKYMQENDYQIPWVTFTDPDDFLDRNYFYEVDKFLATHQDDD
                     ICMIGCNVIFYHEKQKLYKDNHALNFKFKNGIQVKENCNLDNFIQLSAASCFMNIGYL
                     DKLLFDEKLKPNFEDAKFINEYLLENINLKSAFLPKAKYFYRKREDSSSTLDDRDKTK
                     DYYIIVLNLGYLKLFKDTKTTVPSFAQNVVLYDIFWQIKTLISNPEKLAILNDKEKYL
                     FKELL"
BASE COUNT         2493 a          916 c         1325 g         2441 t
ORIGIN      
        1 aagtatagaa aataaatgtt aaatgtaatt cacgctttgt tttttagaga attaaagact
       61 agatttggta aaaataaata tttgggttat ttttgggtta ttggcgagcc tatgagtgtc
      121 attttaatac ttactaccat tgtgactatt ctcagagaat accatcatca actaatgcct
      181 gaagggattt ctgtttttat gtttttaatt tcgggtatag ttccttattt tatgtttaga
      241 agtatagtca ctcagcttat gaatggcata ggagcaaatt tagctctttt tgcttacaaa
      301 cctgtaaaac ccatacatgt ttttatcgct aggactttgc ttgagttttg tatttatttt
      361 gttatatttg tagcagtatt gtttatagtg ggttggtttt ttagattaga agttatccct
      421 aggcattttt taagcgtgat gatttgtata tttttgctta tgtgttcggg ttttgctttg
      481 ggtatggttt ttgctatcat tggatatttt ttagagccct taaagacttt gcttaattat
      541 tttagtatag tattttattg gggttcgggt gttatctttc ctacttggct tatgccaaaa
      601 cctattcttg atatattata ttataatcct ttgcttcatg ttatggagct tttaagattt
      661 aatttttttg aaaattatcc tttgcaagat gattatactt atacttatcc tatattttgc
      721 attatatgca cttcttttgt gggacttttt ttatattatt acaatagaca agctttaaca
      781 gcagtgagaa gaacatgata aaagttttaa atttaaccaa atcttatcct ttatttaatg
      841 gcggaaggca ttatgttttt aaagatttta cttttgaatt tcctgaaaat tgtagtatag
      901 gtttaatggg tagaaatggt gcaggaaaat caactttaat gaagctttta agtggctctg
      961 agcttcccga caggggaaaa attattacta ataagaaatt ttcttggcct ttaggcttaa
     1021 gcggtgcttt tcaaggatct ttaacagcta gagacaatgc taaatttgtg gctagagtat
     1081 atggctataa aggaaaagag ctttacgaaa aagttaaatt tgtagaagat tttgcagagc
     1141 ttggtaaatt ttttgatgag cctatgaata cttattcttc gggtatgagt gctaggatag
     1201 cttttgggct tagtatggct tttgattttg attattatct aattgatgag gcaggagctg
     1261 taggagatcc taaatttaga gaaaaaagcc ataaattata taaagaaaga ttgagccaat
     1321 ctaaagtgat catggtttca cacaatgtgg ctgaaattaa agaatggtgt gataaaatta
     1381 tctttatgga aaatggaaaa gctactgttt atgatgatgt agatgagggc atagccgtct
     1441 atcaaggaaa aaaataatga caaaaataaa tacatttttt aataaaatta aagatctaag
     1501 tatttttgat tctttcaaga tagtatggat cttgatgatt tttgtgatca tttattatat
     1561 tttaattgcc gctgatcgtt atgtaagtac tatcaccatg agtgtaaaat caactactgg
     1621 aagcactcaa gcaagcgggg ttttgtcgct tttaaccgca acttccaata ctagcgaaga
     1681 tatcaagttt ttacaaggct atatagaatc gcttgatatg ttaaagattc tagatgaaaa
     1741 aattcatcta aaaaaacttt acaatgagca atatattgat ttattttata gcttatcaag
     1801 ttctagctct atagaaagtt atttaaaata ttatcaaagc cgcgttaaag tacatgtgga
     1861 tgataaaaca ggacttttaa atgtcgaggt tgaaggattt actccagaat ctgcgcattt
     1921 aatcgccaaa accattatgc aagaaagtga aaaatttatc aatgaaattt cacacaaggc
     1981 agcaagagaa caaatggctt ttgctgaaga agaactagta aaatataaag aacgctatca
     2041 aaaagcacaa aatgatttga ttgcctttca aaataaatac ggagtttttg atcctctaaa
     2101 acaagcagaa gctaaagctg gcttagtaac tcaacttgaa tcagatatcg ctcaaagaga
     2161 agctaagctt ttaaccatgc aaagctatat gaatgatcac gcacctgaaa ttgtaaccct
     2221 aaaggctgaa atcactgctt taaaaaaaca attagtcaaa gaaagatcta aaatttcagc
     2281 cgataattct tctcaaaaac tcaatgatct agctgctaaa tttcaagatc taaccataga
     2341 agcaggcttt gctcaaagtg cttatgaggc ggctttgaaa gcttatgaaa gtgcaaggat
     2401 agaagcttta agaaagatta aacaactagt tatcgttcaa acccctgatg taccccaaag
     2461 tgcaaaatac cctgaaaaaa tttataatat cttaacagca tttattgtat tatctttgat
     2521 ttttggggtg attaaatttg ttaaaatgat tatagaggag cacaagtatt aaaatgaaaa
     2581 aaatattaat tttattttta agttgtattt tttgttttgg agctatagat gtttcacaga
     2641 ttagctcaag tggaaattct agcacaacta gctttgttca aggattagaa aacaatatca
     2701 gtaagagtac ccctactcaa attcctgtat ttggcgcgga attatttaat ggaaatttca
     2761 aaaattacac tcaaagggtt tataatcctg actataaaat cgcagtagga gatcaaatca
     2821 gtcttaaaat ttggggtgcg gttgaatttg aacaaatttt agttgtggat tctcaaggaa
     2881 atatttttat ccctaaggta ggagcggtaa atttgctagg ggtaaaaaat agtgctcttg
     2941 taagtgtgat taaagctcag gtaaataaaa tttataaaaa taatgttttt gtttatgcgg
     3001 atatgaatgc ttatcaaaat gttagcgttt ttgtcacagg cagtgttaat gctccagggc
     3061 tttatcaagg tcttagctcg gattctgtga tccagtatct tgataaggca ggcgggataa
     3121 atttagaata cggaagtttt agagatattc aaattttacg caataatgct gtgattaaaa
     3181 agatagattt gtatgatttt ttacttaagg gtcaaatgga tctttttcct tttagaagtg
     3241 gcgatgtggt tttggtgggc aatgtccaaa gttatgtttt tgtaaatgga gatgtgcaaa
     3301 gaccgtttcg ctttgagctt gcaaatgata ttaaaacttt atttgattta gcccgcgtag
     3361 caggcgccaa acctatagta actaatgcga tactaagaag ttatggaaat gatcataagc
     3421 ttgaagtaag tgcttataat aaaatgcaat tttctaaagt tttattaaaa acgggtgatg
     3481 aggtgcagtt taatcccgaa tacatttcgc aaaatatcag cataacagtc aatggcgagc
     3541 atagcgggct taaaactttg gtagttcgaa aaggaacgac gctggaggat gtttcaagac
     3601 tgattgtagc aaatgggcaa tcggacatga atgccttgca agtttttaga aaaagtgttg
     3661 ctaaaactca aaaagatctt atcaatgctc agcttaaaga gcttgaaacc cttgctttaa
     3721 ctagtccttc ggtgacttct cagggtgcgg ctatcaaagc agaacaagca aaattgatac
     3781 ttgagtttat ccaaagagca aaagaattag agcctaaggg gcaaattgtt atcgataaac
     3841 caaaatctta tggagaggtt atattagaag agggtgatac tatcaatgtc cctagtaaaa
     3901 acaatcttat catagtccaa ggtgaggtta ctttaccagg agcttttgtt tataataggg
     3961 gtgaagattt aaaatactat atcaatcttg caggaggtta tggagaaaga gcagatacct
     4021 ccaaagtact tgttatacgc aacaatggca aggctcaaag atatagtgga agtgttgata
     4081 tgatgccagg tgattctgtc ttggttttgc ctaaggttga gagtgagaat ttacaaattt
     4141 tttctatgct aacgcaaatt ttatatcaaa ttgccgttgc aacgaatgtg gtgttaaatt
     4201 tatgatgatt ttagggtaat ataaaatgaa aattgatact ttaaagatag ctaaagaagt
     4261 ttttgcgaca gaggctaagg ctatagagga tttggcttta aatttggatg aaaatttttc
     4321 taaagccata gaacttatgc ttcatacaaa ggggcgttgc atagtcagtg gcatgggaaa
     4381 atcaggccat ataggagcta agatagctgc gactttagca agcacaggaa ctccaagctt
     4441 ttttatccat cctggagagg ctttacatgg agatcttggg atgcttacgc ctgatgatat
     4501 tttgatagct atttcaaatt caggtgaaac tgaagaaatt ttaaaaatca tccctgcaat
     4561 taaaaagcgc aaaatccctc ttatagctat gtgcggaaaa gaaaattcta cccttgtaaa
     4621 acaaggggat atttttttaa atatatctgt aaaagaagaa gcatgtcctt tgcaacttgc
     4681 tccgatgtct tcgacaactg ctactttagt aatgggtgat gctttagcgg cagctttaat
     4741 gaaggctaga aattttagac ccgatgattt tgctcttttt catccgggtg gaagtttagg
     4801 tagaaagctt ttaactagag taagtgatct aatggtatcc aaaaatcttc ctatagttca
     4861 tcctgataca gaatttaatg atcttgttga tgtgatgacg agtgggaaat taggactttg
     4921 tttggtgctt gaaaatgaaa agctaatagg tattataacc gatggggatt tgcgccgcgc
     4981 tttaaaggct aatgataaac caagatttga ttttaaagct aaagagatca tgagtataaa
     5041 tcctaaagtg gtcgatgctg atgctatggc aagtgaagca gaagagatca tgctaaagta
     5101 taagatcaaa gaaattgtcg tttccaaaga agataaagtg gtaggcatca tacagcttta
     5161 tgcgataggg aatgtgtagt tgaagtataa gtatagtgtc attattccta ttgatttaga
     5221 tcttagacct tttgatatac taaaaaaagt taaaagtatt ttaaaaagat ccagtgatga
     5281 ggtcgagatc gtttttgggc ataatgatcg cggaagtata tttgataaat atcttaagag
     5341 aatcactgaa aaaaataatg ttaaattagt ttcagggaaa ttttatacaa gattgatttg
     5401 tcaaagtttg cttagaaaca gagcggtaga acaatgctcg agcgaattta tttatcttat
     5461 ggatgtcgat tgtttgtttg atgaagaatt aagcgatggt tgtattaatg atatcaagag
     5521 tgataaaaat cctcttataa ttttattttg cctatatctt tcaaaaaaag gttctagaga
     5581 agtttttaag catactagag aagaaatgtt tgataaatat atcgcgttta gaaaagattt
     5641 gtatttacat ttagcttctc cgagtgcaag tatctttatg aaaaaaactg attattttgc
     5701 tgtgggtggc tttgatgaag aatttatggg tcatggtgga gaagattttg aatttatgat
     5761 aaagcttgca ctctataaaa atgtcattaa accaactaaa gatttaatgc ttaataaatt
     5821 ttataaagca ccacttttaa gtgaaggttt tagaaaatat ctcgctttta atggtttacc
     5881 atattttttt gataaaaaga ttgtttttca ccttcatcat agaagaaata aattattcgg
     5941 atactttaaa caatatcata agaattcaaa tcttttacaa gaaaagatta aacttgattc
     6001 tagtctagaa gaaaatgagg aaagcttaat agaattctat gagcagcttt gtaaaaaata
     6061 tgacgtaagt atagataaat atagtgtttt atttgatagt tataaaccaa aaaaatttac
     6121 tttagatcat attttacttt ttttaaaaag actgtagatg ttaaaacttt caaatgaaaa
     6181 taaaaaattc attaaagtta tattagatgg tttttttaga atatatcttg cgaaactctt
     6241 ttctaatttt aaacccaaaa aacacaaagg cttcactcaa tacgctataa tatcagctgt
     6301 atataatgta gaaaaatatt tagatgatta ttttaaatcc ataataaacc aaagacttga
     6361 ttttaaaaaa aatattttta tgatacttgt agatgatggc tctactgata attctgcaca
     6421 aataatcaaa aaataccaaa aaaaatatcc taaaaatatc gtctatcttt acaaagaaaa
     6481 tggtgggcaa gcaagtgcta gaaatttagg cttaaaatat atgcaagaaa atgactatca
     6541 aattccttgg gttactttta ccgatccaga tgattttttg gatagaaatt atttttatga
     6601 agtagataaa tttttagcaa ctcatcaaga tgatgatatt tgcatgatag ggtgtaatgt
     6661 tattttttat catgaaaagc aaaagctata taaagacaac catgctttaa attttaaatt
     6721 caaaaatggt atacaagtta aagaaaattg taatcttgat aactttatac aattatctgc
     6781 tgctagttgt tttatgaata ttggatatct tgataaatta ttatttgatg aaaaactaaa
     6841 acccaacttt gaagatgcta aatttattaa tgagtattta ttagaaaata tcaatttaaa
     6901 aagtgctttt ttgccaaaag caaaatattt ttatagaaaa agagaagata gtagttcaac
     6961 cctcgatgat agagataaaa ccaaggatta ttatattata gttctaaatt taggctatct
     7021 gaaacttttt aaagatacaa aaacaacagt tccttctttt gcacaaaatg tcgttctgta
     7081 tgatattttt tggcaaatta aaactttgat ttcaaatcct gaaaaactag ctattttaaa
     7141 tgataaagaa aaatatcttt ttaaggaatt gttgt
//
LOCUS       DAQUWA010000083         7127 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.083, whole genome shotgun sequence.
ACCESSION   DAQUWA010000083 DAQUWA010000000
VERSION     DAQUWA010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7127
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.083"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            32..697
                     /locus_tag="R8X70_001638"
     CDS             32..697
                     /locus_tag="R8X70_001638"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929397.1"
                     /translation="MKNVIQEYCSKKQFESTIAELKSLLSQKELQLQNKTNELKNLQE
                     DIIHKKQLLEVQNLEQDLNLKSLQTKEIQENINLKTLEKTKIQKELDQYNNVVYIERY
                     HQSAKQRIYNHLSYKLGFCAIKKSKTLWGWISMPIILLSIFISHKQEQKIYQEKIKKD
                     PSLKLPSLELYTDYQEARKEENSFTYKLGQAIMNANKAWYKGGYVKLWFEIRKLKEKE
                     NIF"
     gene            712..4464
                     /locus_tag="R8X70_001639"
     CDS             712..4464
                     /locus_tag="R8X70_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEF2929398.1"
                     /translation="MQTKTVGIVIPIYNVEKYLKECLDSVINQSYTNLEIILVNDGST
                     DENSLSIAKEYTLKDKRITLFDKKNGGQSSARNVGIEYFSGEYKLKNKTQTIKENSLI
                     EFNLEDNNPYEIYTVYKSYKAFNNEKDLTKFTYPNIDYIIFLDPDDYWRLDAVEQCVI
                     RCQDVDLIWFDYKMFYDNIDKNHYENVENLTKTQMQIYEYFAPEIINVQQWLERMIKI
                     QSTLPFWCVCAACYSFSYLKRIQLKFLDGFIHEDVHFGILSFIQAENIYIFPSQLYYY
                     RIRSSSTAAYDKKITKDNITPYIENLCYDFNGDIKKAKHYHAKSSNFFNAFYIREFIK
                     NKLDDKKGQMLEEAIFMYLYFWHFDLRDFEKDPRDTLKFLSNHKPLYQENQDRYPEYD
                     FICKYGFARDRIQKQLTYRLGKLVLEKSQNFFGLIFLPYFIFKLILKFKNEKKEYQKL
                     IKKNPELSLPKLESYPDFDDIWKVREHLSFKIGHLILKANKNWHKGSYIYLPYYIYKC
                     YKQHQNSKKNISTSIHSQGILLKRQFIWKDENLVNIALNKRVFQSSIDELDYRHNPNM
                     IVSQDYSGVKSYKTCFTNWPWFVVDLCKVCVLEKIRIINVKNHFKRKYLRGMDISFSI
                     DGIHWTAISREKFYWKYNDYYCELVLSECLSARYVKISIERGALELSKIEIFSRNKNG
                     YIISSKPDGLGMRLASILVGMYLAKKCNFNFGFTWSNSIDLAFMGITDSQNTKEINYL
                     GNAMDEVDAVFNLDFIKEYLIDSACVNENHGMEIRKKNSTFEQIQNKTNFETEWGWYS
                     TDILPSNWLNECVEKECLKEISRIYSTIGFSDGFEKIIQDSRVVKINKFVALHIRGGD
                     IIFSKIRKAPGWNVVQERYFPYEIALDIVTKELASGYSIIVFGQDLNANKALVEYFQK
                     TAFEKIFLVDEFIDKTYNEMERSFFEINLMSRAEKIYSAKESVFSKVAMMIAGKNNLI
                     SYHDIYTQVEQADIIQANLSKITLHNFQDARAYFRLFELFRDRDIEKSMSFLNKALEL
                     DYDNDAYRIYILDCLFRLKDYHTVNMMLEKIITERCEEFFTTLLQYSMGSFTLEYEYY
                     RNFEQKEYPNILYVAFRIFMFFGDIKKADYVRFHLLEDKLSIFKKKSRSNEKNIGAVA
                     RVKCHLSYSLGVEFIRNKNKIYKIPICIYKVIGKYRKERMVWKNYNYPSLETYSDYQD
                     ALRIKNQLSYKIGDLLIQSYKKWYKGAFLILPWEFYLLVKKYKKGK"
     gene            4464..5006
                     /locus_tag="R8X70_001640"
     CDS             4464..5006
                     /locus_tag="R8X70_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HEF2929399.1"
                     /translation="MAIEFDVQESKILKGVYIVTPNKFRDLRGEIWTAFTSGTIDKLL
                     PNGLKFIHDKFIHSKHNVIRGIHGDIKTYKLATCVYGEVHQVVVDCRKDSPTYLKYEK
                     FIINQDNQQIILVPAGFGNAHYVSSESAVYYYKCAYLGEYVDADDQFTYAWNDERIGI
                     NWPTNSPILSDRDVLAVNKG"
     gene            5010..6065
                     /locus_tag="R8X70_001641"
     CDS             5010..6065
                     /locus_tag="R8X70_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HEF2929400.1"
                     /translation="MEKNSRIYIAGHRGSAGSAIMEKLQNLGFDNLIYATREELDLLD
                     FDAVKNFFDDNQPEYVFFAAAKMSALGVRAPADILYENLTIQNNIFHNSYLSNVKKLI
                     FFGSSWMYPQYTQNPIKEDSLLTSELEYNAEPYALAKIAGVRMCEFYNLQYNTNFISV
                     ALTNLYGKTADFNLKTARVLPAMLRKFHLAKLLNEKKYGDILLDLNLQDESKAISYLK
                     TNGIYEEYIELWGAGKTRREFIHSDDLVDACMYIMKHVNFSDLSKNNIKNTHINIGTG
                     SDLSIAELALLIKEITQYKGEIKFDISKPDSPMNRLLDCSKIHSLGWKHKIELEEGIK
                     MMYEDYLQNNKRGTGVK"
     gene            6062..7093
                     /locus_tag="R8X70_001642"
     CDS             6062..7093
                     /locus_tag="R8X70_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEF2929401.1"
                     /translation="MKKTTLITGFTGQVGSQMADFLLENTNYDVIGMMRWQESMDNIY
                     HLSDRINKKDRISIFYADLNDYSSIQKLFESKRPDVIFHLAAQSYPKTSFDIPIETLQ
                     TNIIGTANILENIRLLKAKDGYDPVVHICSSSEVYGRAKVGIKLNEDTTFHGASPYSI
                     SKIGTDYLGRFYGEAYGIKTYVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVV
                     KVGNLSSVRTFQDCRDAIRAYYLLSLESEKGNVPCGEAFNIAGEEAFKLPEVIDILLG
                     FSTRKDIKVEEDEERLRPIDADYQMFDNTKIKSYINWKPEIPARKMFEDLLNHWRKEI
                     SMGRIPLNR"
BASE COUNT         2696 a          813 c         1241 g         2377 t
ORIGIN      
        1 ttttgacaaa tttattcccg atctttgttt tttgaaaaat gttattcaag aatactgctc
       61 aaaaaaacag tttgaatcga ctattgctga gttaaaatca ttgctttctc aaaaagaact
      121 ccaacttcaa aataaaacta atgaacttaa aaatttacaa gaagatatta tccataaaaa
      181 gcaacttcta gaagttcaaa atttagaaca agatttaaat ttaaaatctc tacaaactaa
      241 agaaattcaa gaaaatatta atttaaaaac attggaaaaa acaaaaatac aaaaagagct
      301 agatcagtat aataatgtag tttatattga aagataccat caaagtgcaa aacaaagaat
      361 ttataatcac ttatcatata aactaggttt ttgtgctata aaaaaatcta aaactttatg
      421 gggatggatc agtatgccaa taatactttt aagtattttt atatctcata agcaagaaca
      481 aaaaatttat caagagaaaa taaaaaaaga tccatcctta aaacttccat cgcttgaatt
      541 atatactgac taccaagaag caaggaaaga agaaaatagc tttacatata aacttggaca
      601 agccataatg aatgctaata aagcttggta taagggtggg tatgttaaac tatggtttga
      661 gattaggaag ttgaaggaaa aagaaaatat attttaagca aaggtctagc aatgcaaact
      721 aaaaccgtag gtatagtaat tcctatttat aatgtagaaa aatacttaaa agaatgttta
      781 gacagtgtta tcaatcaaag ctatacaaac ttagaaatta tacttgtaaa tgatggtagt
      841 acggatgaaa attcactgag tattgctaaa gaatatactt taaaagataa aagaattact
      901 ctttttgata agaaaaatgg tggacaaagt agtgctagaa atgtaggtat agaatacttt
      961 agcggagaat acaaacttaa aaacaaaacc caaaccatca aagaaaattc tttaatagaa
     1021 tttaacctag aagataataa tccttacgaa atatatactg tatataaaag ttataaagct
     1081 tttaacaacg aaaaagatct aacaaaattt acttatccta atatagatta tattatcttt
     1141 ttagatcccg atgattattg gcgtttggat gcggtagagc agtgtgtgat tagatgccaa
     1201 gatgtcgatt tgatttggtt tgattataag atgttttacg ataatattga taaaaatcat
     1261 tatgaaaatg ttgaaaattt aacaaaaaca caaatgcaaa tttatgaata ttttgctcct
     1321 gaaattataa atgttcagca gtggctagaa agaatgatta aaattcagtc tactttgcca
     1381 ttttggtgtg tgtgtgctgc ttgttattct ttttcttatt taaaaagaat tcagcttaaa
     1441 tttttagatg gttttatcca tgaagatgtt cattttggca ttctatcttt tatacaagct
     1501 gaaaacattt acatatttcc atcacaatta tattattata gaattcgttc atcttcaact
     1561 gctgcttacg ataagaaaat aaccaaagac aatattactc cttatattga aaatttgtgc
     1621 tatgatttca atggtgatat taaaaaagct aagcattatc atgcaaaaag tagtaatttt
     1681 tttaatgcat tttatattcg agaatttatc aaaaataagc tagatgataa aaagggacaa
     1741 atgcttgaag aggcaatttt tatgtatcta tatttttggc attttgattt gagagatttt
     1801 gaaaaagatc ctagggatac tttaaaattt ttatctaatc ataaaccatt atatcaagaa
     1861 aatcaagata gatatccaga atatgatttt atatgcaaat atggttttgc tagagataga
     1921 attcaaaaac aacttactta cagattaggg aaattagttt tggaaaaatc ccagaatttt
     1981 tttggtctaa tatttttacc ttattttatt tttaaattaa ttttgaaatt taaaaatgaa
     2041 aaaaaagaat atcaaaaatt aatcaaaaaa aacccagaat tatctttgcc aaaattagaa
     2101 tcatatcctg attttgatga tatttggaaa gttagagagc acttgtcatt taaaatagga
     2161 catttgattc tgaaagcaaa taaaaattgg cataagggat catatatata tttgccttat
     2221 tatatttata aatgctataa acagcatcaa aatagcaaaa aaaatatatc aacttctatc
     2281 catagtcaag gaattttatt aaagagacaa tttatatgga aagatgaaaa tctggtgaat
     2341 attgctttaa ataaacgagt atttcaaagt agtatcgacg aattagatta tagacataat
     2401 ccgaatatga tagtcagcca ggattattct ggagttaaat cgtataaaac ttgttttact
     2461 aattggcctt ggtttgttgt tgatttgtgt aaagtttgtg tattggaaaa aataagaatt
     2521 atcaatgtta aaaatcattt taagagaaaa tacttaagag ggatggatat ttctttttcg
     2581 atagatggta ttcattggac tgcaatatcg agggaaaaat tttattggaa atataatgat
     2641 tattattgtg aattagttct gtctgagtgc ttgagcgcaa gatatgttaa aatttcaata
     2701 gaaagaggtg ctttagaatt gtcaaagatt gaaatttttt caaggaataa aaatggatat
     2761 attatctctt caaaacccga tggtttaggt atgagattag ctagtatttt ggttgggatg
     2821 tatttggcaa aaaaatgtaa ttttaatttt ggatttacat ggtccaattc tatagatttg
     2881 gcctttatgg gtataaccga ttcgcaaaat actaaagaga ttaattatct tggtaatgca
     2941 atggatgagg tagatgctgt ttttaattta gattttatta aagagtattt gattgatagt
     3001 gcttgtgtta atgaaaatca tggaatggaa attcgtaaga aaaattctac ctttgaacag
     3061 attcaaaata agactaattt tgagacagaa tggggttggt attctaccga tattcttcct
     3121 agtaattggt tgaatgagtg tgttgaaaaa gaatgtttga aagaaatttc tagaatttat
     3181 agcacgatag gtttttcaga tggatttgaa aaaataattc aagattctag agtagtaaaa
     3241 attaataagt ttgttgcatt acatattaga ggtggagata taattttttc gaagattagg
     3301 aaagctcctg gttggaatgt agtacaagag agatattttc catatgaaat tgctttggat
     3361 attgtaacca aagaattggc aagtggctac agcattattg tttttggaca ggatttgaat
     3421 gctaataagg ccctcgtgga gtattttcaa aaaactgctt ttgagaagat atttcttgta
     3481 gatgaattta tagataagac ttataatgaa atggaaagaa gtttctttga aattaattta
     3541 atgtctcgag ctgaaaaaat ttactctgca aaggaatctg tattttccaa agttgctatg
     3601 atgatagcag gaaaaaataa tttaatttcc tatcatgata tttatactca ggtggaacaa
     3661 gcagatatta tacaagcaaa tttatcaaaa atcacattgc ataatttcca agatgctagg
     3721 gcttatttta gactttttga attatttaga gatagagata ttgaaaaatc aatgtcattt
     3781 ttaaataaag ccttagagtt ggactatgac aatgatgctt atcgcatcta tatattagat
     3841 tgtctattta gactcaaaga ttatcacact gtgaatatga tgttggaaaa aattattact
     3901 gagcgttgcg aagaattttt tacaacatta ttgcagtatt ctatgggaag ttttacatta
     3961 gagtatgaat attatagaaa ttttgaacaa aaagaatatc caaatatttt atatgtcgca
     4021 tttagaattt ttatgttttt tggagatatt aaaaaagccg attatgttcg ttttcattta
     4081 ttggaggata aattatctat ttttaaaaaa aaaagtcgct caaatgaaaa aaatatagga
     4141 gctgtagcta gggtaaagtg tcatttaagt tattctttag gggttgagtt tatacgcaat
     4201 aagaataaaa tttataaaat tcctatttgc atatataagg taattggtaa atatcgaaaa
     4261 gagagaatgg tttggaaaaa ttataattat cctagtcttg agacttacag tgattatcaa
     4321 gatgctttaa ggattaaaaa ccaactttcg tataagatag gagatctttt gattcaaagt
     4381 tataaaaaat ggtacaaagg tgctttttta atattgcctt gggaattcta tcttttggta
     4441 aaaaaataca aaaaaggaaa ataatggcta tagaatttga tgtacaagaa tcaaaaattt
     4501 taaaaggagt gtatatcgta actccaaata aatttagaga tttaagaggt gagatttgga
     4561 cggcttttac aagtgggact atagataagc ttttaccaaa tggattaaaa tttatacatg
     4621 ataaatttat acactctaaa cacaatgtta ttcgtggtat tcatggtgat ataaaaactt
     4681 acaaattggc tacttgtgtt tatggagaag tgcatcaggt ggttgttgat tgtaggaaag
     4741 attctcctac ttatttaaaa tatgaaaaat ttattataaa tcaagataat cagcaaatta
     4801 tcctagtgcc agcaggtttt ggaaatgctc attatgtaag tagtgaaagt gctgtatatt
     4861 attacaaatg tgcttattta ggagagtatg tggatgctga tgatcaattt acttatgctt
     4921 ggaatgatga gagaattggt ataaattggc caacaaattc gcctattctt tcagatcgag
     4981 atgttttggc ggtaaataag ggttaaaata tggaaaaaaa ttctagaatt tatatagcag
     5041 gtcatagggg ttcggcagga agtgccataa tggaaaaatt acaaaattta ggttttgata
     5101 atttaattta tgcgactcga gaagagttgg atttacttga ttttgatgct gttaaaaatt
     5161 ttttcgatga taatcagcca gaatatgttt tttttgcggc agctaaaatg agtgctttag
     5221 gagttagggc tccagctgat attttatatg aaaatttaac aatacagaat aatatttttc
     5281 ataactcata tctttcaaat gttaaaaaat taattttttt tggtagttct tggatgtatc
     5341 cacaatatac ccaaaatccc ataaaagaag atagtttgct tactagcgaa ttagaatata
     5401 atgctgagcc atatgctttg gcaaaaattg ctggagttag aatgtgtgaa ttttataatt
     5461 tgcaatataa tactaatttt atttcggttg ctttaactaa tttgtatgga aaaacagctg
     5521 attttaattt aaagacagct agagtgctac cagcaatgct tagaaaattt catttggcaa
     5581 aactacttaa tgaaaagaaa tacggcgata ttttattgga tctcaactta caagatgaaa
     5641 gcaaagcgat aagctatctt aagacaaacg gaatttatga ggaatatata gaactttggg
     5701 gggccggcaa aactagaaga gagtttatac attcagatga tttagtggat gcttgtatgt
     5761 atataatgaa acatgttaat ttcagtgatt tgtctaaaaa taatataaaa aatacacata
     5821 ttaatatagg cactggaagc gatttgtcta ttgcagagct agctcttttg ataaaagaaa
     5881 ttacgcaata taaaggtgaa ataaaatttg atataagcaa gccagatagt cctatgaata
     5941 gattgcttga ttgctctaaa attcattctt taggatggaa acataaaata gaacttgagg
     6001 aaggtattaa aatgatgtat gaagattatc ttcaaaacaa taaaagaggt acgggagtaa
     6061 aatgaaaaaa acaacattaa ttactggttt tacgggccaa gttggctcgc aaatggcaga
     6121 ctttttacta gaaaatacaa actatgatgt tataggtatg atgcgttggc aagagagcat
     6181 ggataatatc tatcatttaa gcgataggat aaacaaaaaa gatagaatca gcatttttta
     6241 tgcagatctg aatgattact caagtattca aaagcttttt gaaagtaaaa gacccgatgt
     6301 gatctttcat ctagccgcac agtcttaccc aaaaacttct tttgatatac ctatagaaac
     6361 tctacagaca aacatcatag gcacagcaaa tattttagaa aatattagat tattaaaagc
     6421 taaagatggc tatgatcctg tggtacatat ttgctcttct agcgaagttt acggtagagc
     6481 aaaagtgggt atcaagctga atgaagatac gacttttcat ggtgcaagtc cttatagtat
     6541 aagcaaaatt ggtacggatt atctaggaag attttatggt gaagcttatg gtataaaaac
     6601 atatgttacc agaatgggaa ctcatagtgg tccaagacgc tccgatgtat tttttgaaag
     6661 cacagttgca aagcagattg ccttgatcga agcagggtat caagagcctg ttgtaaaagt
     6721 aggaaattta tctagcgtaa gaacttttca agattgtcgt gatgctataa gagcttatta
     6781 tctactttca ttagaaagtg aaaaaggcaa tgttccttgt ggagaagctt ttaacatagc
     6841 tggcgaagaa gcctttaagc ttcctgaagt tattgatata cttttaggtt tttctacaag
     6901 aaaagatatc aaagtggaag aagatgaaga aagattacga cctattgatg cagactatca
     6961 aatgtttgat aataccaaaa tcaaaagtta tatcaattgg aagccagaaa ttccagctag
     7021 aaaaatgttt gaggatttat taaatcattg gagaaaagaa atttccatgg gtagaatccc
     7081 acttaatagg tagcagatca tgataatccg ttctcaaaca cctttgc
//
LOCUS       DAQUWA010000084         6987 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.084, whole genome shotgun sequence.
ACCESSION   DAQUWA010000084 DAQUWA010000000
VERSION     DAQUWA010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6987
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.084"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            228..743
                     /locus_tag="R8X70_001643"
     CDS             228..743
                     /locus_tag="R8X70_001643"
                     /inference="COORDINATES: protein motif:HMM:NF024671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HEF2929402.1"
                     /translation="MKALDVAKYFLFLARSKEAGDTLSNLKIQKMLYYAQGYMLAIFE
                     KPLFDDRIEAWKHGPVIRTVYEQFKKYGSNSISFDELEDFDTDCIADNKDAHELLVLI
                     FDKYGSMGAWELREKTHEEYPWKSSYVASLGNEITQDAIATFFKEENKKEALRLKELQ
                     KNDMEINELWP"
     gene            779..1021
                     /locus_tag="R8X70_001644"
     CDS             779..1021
                     /locus_tag="R8X70_001644"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929403.1"
                     /translation="MTSIDIEILLEHKNELLKYLSHLGDSSVFEKDKCFKALNNIEQD
                     YFICIGLTDNEKQKDFCKSVFIILRDHWRKFNSTFY"
     gene            1246..1518
                     /locus_tag="R8X70_001645"
     CDS             1246..1518
                     /locus_tag="R8X70_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929404.1"
                     /translation="MSFTDLYFGREEKRISNYARELVKDELESRENFADIFNSLQEFK
                     NILEVSLEDDEDIAASLQAYGDEFINDTYDLLEKVRKFEKKYEKLY"
     gene            1918..2088
                     /locus_tag="R8X70_001646"
     CDS             1918..2088
                     /locus_tag="R8X70_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929405.1"
                     /translation="MPRLADLLGFIKNKNKFDKITLFKWLISLGGEGAVFDDREVFKN
                     CFFIVRNSKKVD"
     gene            2343..2612
                     /locus_tag="R8X70_001647"
     CDS             2343..2612
                     /locus_tag="R8X70_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929406.1"
                     /translation="MKAYHTKEQVIIKLSKDEYRKEMKLNKSLKDENKSLKTEISNLE
                     NEKIELLKELKDQIEANMKNIKEISSLQNKIYELLYAKERSKLCS"
     gene            2603..2860
                     /locus_tag="R8X70_001648"
     CDS             2603..2860
                     /locus_tag="R8X70_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929407.1"
                     /translation="MFLIFKKNEKIRNLEKEVQRLKGVIALKDTAINEISLKLEEEIK
                     INVKLSNFRIKILDALGLIGVKNNDEIAIKEVKRLKEKECQ"
     gene            2851..3078
                     /locus_tag="R8X70_001649"
     CDS             2851..3078
                     /locus_tag="R8X70_001649"
                     /inference="COORDINATES: protein motif:HMM:NF025456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929408.1"
                     /translation="MSVTTISQEKQVLNILLNKGKIDNFYCIDTRITTRLGAYIYNLR
                     NKGYAIETVRNKETRNTFYILKSTPKIKKAG"
     gene            3080..3934
                     /locus_tag="R8X70_001650"
     CDS             3080..3934
                     /locus_tag="R8X70_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HEF2929409.1"
                     /translation="MNCKIIDLEQGSVEWLNFRKGKIGASMVASCVGIKGAFNSKEQA
                     RDIILGLKEVYQNEAMRRGNEYEPLIRARVEFLHSVSITPVVLQSLENEMFIASLDGI
                     DENGIIYEFKYSQDEYDFIKRNKKPSDKYYAQVQFGLYISGKEKCLFVAMNKEEEIVE
                     CEVSKDEAYQEWLVKNIKEFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIK
                     EKLESLKKELIALANGEKARCLDITIYPQSRTIIDYKGFLEQKNITVPKEFYKESTSM
                     CLKIKKGA"
     gene            3983..4198
                     /locus_tag="R8X70_001651"
     CDS             3983..4198
                     /locus_tag="R8X70_001651"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929410.1"
                     /translation="MLNLKSLEITCKQCKTKITLDIGKTVIVCPLCNNAFYNSYDEAP
                     LSKLGNILQSLKEHKKAEFRFITDEKE"
     gene            4201..4410
                     /locus_tag="R8X70_001652"
     CDS             4201..4410
                     /locus_tag="R8X70_001652"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929411.1"
                     /translation="MKSYKITCRNCDTQIIAKVEQSILFCPACHTNFFNSYDEAPFKT
                     LRQSLKSFEDKSSVLKFEFITDEKE"
     gene            4412..4486
                     /locus_tag="R8X70_001653"
                     /pseudo
     CDS             4412..4486
                     /locus_tag="R8X70_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002802301.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
     gene            4862..5863
                     /locus_tag="R8X70_001654"
     CDS             4862..5863
                     /locus_tag="R8X70_001654"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929412.1"
                     /translation="MLSQIQNNTSIQVASFYEVTKNSIAKHFLRNADELIENIHYFYD
                     YEQTKGGRQRVIKWTLEGVYKLFDKIKKLKERNKMAEEKENIVNFKIKIIHEENIELG
                     IMANSLLSFQKLMDSFISKEHGITQSKIFLEKVETGSDIYSLVFEIAGEVLPIIAPIQ
                     ALNEFIELIISFKNIKSKSIEEIEENPHFTKYNANNLKNIFAPVTINQNAFFINHKGE
                     ELLRINSDEAELIYENANYICEKKEIEYQKIHENALITMYKTTNKIDNKTKHKAKCDA
                     LSPYAVDVSFSDEKIAEEVLKNPYGFNFLVDLEYYKNDKNKIILYRIFNIKDKISLE"
     gene            5878..6756
                     /locus_tag="R8X70_001655"
     CDS             5878..6756
                     /locus_tag="R8X70_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P63C domain-containing protein"
                     /protein_id="HEF2929413.1"
                     /translation="MAEEKLLKSLADGVLKINESSIDVAVLENGVRIITHSGVFRALG
                     REPRGNARLDQIPAFMDAKNLQPLISSELKTQISRISYLDKNSKVKEGYNADILPLVA
                     DLYLKAREEGILTQAQIETAKKAEILIRSLARLGITALVDEATGYQYERERDELQKIL
                     KAYISEELLKWEKRFPDDFYKEIFRLNGWDFTVSGIKKRPGVIGKWTNTLIYNELPAG
                     VLQELKENTPKHARYHQRLTPDIGQPNLTAQIYKVIGIMQSSDNMQEMWERFKKIKAR
                     EQDDSVEFDENGRIKE"
     gene            6758..6919
                     /locus_tag="R8X70_001656"
     CDS             6758..6919
                     /locus_tag="R8X70_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system HicB family antitoxin"
                     /protein_id="HEF2929414.1"
                     /translation="MAEEKESKGSYNLQIKIPNELKDKLEKKAEKAGVSLNQYIMYLF
                     IDDIKNERI"
BASE COUNT         2865 a          821 c         1163 g         2138 t
ORIGIN      
        1 taagtatttt actaaacaaa actgctctca agttttagat aaattttatt atattaattg
       61 ctatgattat aactacaaag gtactaaagc agtagcttat aaattagaag caaataatct
      121 aaaaggcgaa caaaaatata agataatata agataatata agataatata agataatata
      181 tgataatata tgataatata tttatatctt aaaataaggt aaaaactatg aaagcattag
      241 atgttgcaaa atacttttta ttcttagcaa gaagtaaaga agctggcgat acgctatcaa
      301 atttaaaaat acaaaaaatg ctttattatg cacaagggta tatgcttgct atatttgaaa
      361 aaccgctctt tgatgataga attgaagcgt ggaaacacgg ccctgtaatt agaacagtgt
      421 atgaacaatt taaaaaatat ggatcaaatt ctatctcttt tgatgaactt gaagattttg
      481 atacagattg tattgctgac aataaagatg cccatgaact tttagttctt atttttgaca
      541 aatacggttc tatgggggct tgggagctta gagaaaaaac tcacgaagaa tatccttgga
      601 aaagttctta tgttgcgagt cttggaaatg aaattacaca agatgcaata gctacttttt
      661 ttaaggaaga aaataaaaaa gaagcattaa gactaaaaga attacaaaaa aatgatatgg
      721 aaattaatga attatggcct taattaattt tagatatttc ttaattcttc tttccaatat
      781 gactagtata gacatagaaa ttttacttga acacaaaaac gaattactta aatacttatc
      841 tcatctagga gatagtagtg tttttgaaaa agataagtgt tttaaagctt taaataatat
      901 agagcaagac tactttattt gtattggttt aacagacaat gaaaaacaaa aagatttctg
      961 taagagtgtt tttattatct taagagatca ttggagaaaa tttaattcta ctttctatta
     1021 acaccaaact attccctcaa taccccatca accttttata tccatcgcat taatccttcc
     1081 aattttctaa aaatgttttt aaggattttt ttggtttttc atcttcctat taagaaatta
     1141 taccaaaaaa atatttttaa aaaatgtagg aatactacta ttatttaagc atagtttaag
     1201 tgtagtaata ctacaattat tttaacaaaa caaaaaggat aaaaaatgag ttttacagat
     1261 ttgtatttcg gtagagaaga aaaaagaatt tctaactacg caagagaatt agttaaagat
     1321 gaattagaga gcagagaaaa ctttgcggat atttttaact ctttgcaaga atttaaaaat
     1381 attttagaag taagcttgga agatgatgaa gatattgcag cttctttgca agcctatgga
     1441 gatgagttta ttaacgatac ctatgattta ttggaaaaag taaggaaatt tgagaagaaa
     1501 tacgaaaagc tttattaaaa gtttaacaag ttctttttat taaagaactt tcttaagctt
     1561 ttgaccgctt ggaaattaag ctttgctatc gtgttgatgg ttttgaatag cggaagggtt
     1621 agcgagttat ccataaactt ggctcgttat tattgtttat agtgctattt ttaaggtttt
     1681 cttgcacttt aaaaacgaca gaaaactaag ggtttaagaa aaagaaagta taattataaa
     1741 gtttaagtgg ctaacttgtc tcagtgttga gaaaggaggc tctaaaatgt gggataaaat
     1801 tttaacaatt ttaatcttaa tcttagagct aattagagag cttataaaac tctaatattt
     1861 tttaacacag ataaatttta actaaatccg cttagcataa acttaaacga ttatacaatg
     1921 ccgagacttg cggatttact cggctttatc aaaaataaaa ataaatttga taaaataaca
     1981 ttgtttaagt ggctaatttc tcttggtggg gaaggagctg tttttgatga tagagaagtt
     2041 tttaaaaatt gcttttttat tgttagaaat agtaaaaaag ttgattgaaa taatcaatca
     2101 actaaactaa aaaaccacta aaattataga atagccttgc ttagcctata cttaaacaat
     2161 actcacgcca agagagcaag gctcttggct tttcttaagc tcctttaatg cttaaatggg
     2221 gcaactttaa aactacttat tttacattaa tgagaatttg tcttttttgt tttttagttt
     2281 ttattttcct ttttaataaa gaactcagtt gctcctttta agcattaatc taaggagaaa
     2341 aaatgaaagc ttatcacaca aaagaacaag tcatcattaa acttagcaaa gatgaatata
     2401 gaaaagaaat gaagctaaat aagtctttaa aagatgaaaa taaatcttta aaaactgaaa
     2461 tttctaatct tgaaaatgaa aaaatagaac ttttaaaaga gttaaaagac caaatagaag
     2521 caaatatgaa aaatataaaa gaaattagct ctttgcaaaa taaaatttat gagcttcttt
     2581 atgcaaaaga aaggtcaaaa ctatgttctt gatatttaaa aagaatgaaa aaatcagaaa
     2641 cttagaaaaa gaagttcaaa ggctaaaagg tgtaatagca ttaaaagata ctgctataaa
     2701 tgaaatttca ttgaagctag aagaagaaat taaaatcaat gtaaaactta gtaattttcg
     2761 cataaaaatc cttgatgctt taggacttat aggggttaaa aataatgatg aaatagccat
     2821 aaaagaagta aaaagattaa aggagaaaga atgtcagtaa ctacaatatc acaagaaaaa
     2881 caagtcttaa atattttatt aaacaaagga aaaatagata atttttattg catagataca
     2941 agaattacta caagacttgg agcttatatt tataatctta gaaataaagg ttatgcaata
     3001 gaaacagtta gaaacaaaga aacgagaaat actttttata ttttaaaaag cactccaaaa
     3061 ataaaaaagg caggataaaa tgaattgtaa aataattgat ttagagcagg gtagtgtgga
     3121 atggttaaat tttagaaaag gaaaaatagg tgcatcgatg gtagcatctt gtgtaggtat
     3181 taaaggtgct tttaactcta aagaacaggc aagagatatc atcttaggac ttaaagaagt
     3241 ctatcaaaat gaagccatga gaagaggcaa tgaatatgag cctttgatta gagctagggt
     3301 tgaattttta cattctgtga gtatcactcc tgtagttttg caaagtctag aaaatgaaat
     3361 gtttatagca agtttagatg gaatagatga aaatggaatt atttatgagt ttaaatactc
     3421 gcaagatgag tatgatttta tcaaaagaaa taaaaagcca agtgataaat actacgctca
     3481 agtgcaattt gggctttata tcagtggtaa agaaaaatgc ctttttgtag ccatgaataa
     3541 agaagaagag attgtagagt gcgaagtttc aaaagatgaa gcttatcaag aatggttggt
     3601 taaaaatata aaagagttta tattagatta tatcatagat caaaaaagtg aatataaaga
     3661 gcttgaagat actaaagcaa aaaatctaac gattgaaatt ataagacttg aaaacacgat
     3721 taaacctatt aaagaaaagc tagaaagtct taaaaaagaa ctcatagcct tggcaaatgg
     3781 agaaaaagca agatgtttgg atatcacaat ttatccgcaa agtagaacta taattgatta
     3841 taagggcttt ttagagcaaa aaaatattac tgtgcctaaa gaattttata aggaaagtac
     3901 ttcaatgtgc ttaaaaatca aaaaaggagc ataaaaataa agcacttttt gataaaatta
     3961 taaaaacaaa ggaagggtta aaatgttaaa tttaaaaagt ttagaaatca cttgcaaaca
     4021 atgtaaaact aaaatcactt tagatatagg taaaactgtc attgtatgcc cactttgcaa
     4081 taatgctttt tataattctt atgatgaagc tccactttct aaactaggaa atatattgca
     4141 aagcttaaaa gagcataaaa aagcagagtt tagatttatt acagatgaaa aggaataaat
     4201 atgaaaagct ataaaattac ctgcagaaac tgcgatacgc aaatcattgc aaaagttgag
     4261 caaagcattc ttttttgtcc tgcttgtcat acaaactttt ttaattctta tgatgaagca
     4321 ccttttaaaa ctttacgtca gagcctaaaa tcttttgaag ataaaagcag tgttttaaaa
     4381 tttgagttta tcacagatga aaaggaataa aatggagaaa gaaaacattg ttaaagaagt
     4441 ttgtaaagag ttaaatatca cgcaaaagga gttaagcgag attttagtaa tttatgttct
     4501 ttgaattagg gttgtttaag atttttgtgt tagaatttgg ctatgttaga attaattaaa
     4561 aacatagggc ttggcttatt tgttaatggg agtttcgcat taatgaattt tgactttaaa
     4621 ccccaaagct ttatcataac tgcttttagc gtcgggatta tggctatatg tattcttatg
     4681 caaaggaggc aaaaggatga atgagatagg tttaaacatt atcgcagggg taagcgttat
     4741 actctttgct tatacttgct atctatttta taagcaaaat aagtctctaa aagacaaaac
     4801 gaaagaaagt aagcactaaa atcaaaacaa ccctttcaaa gcataaaatg aaagggttaa
     4861 tatgctatca caaatacaaa ataatacctc aatacaagtt gcttcatttt atgaagttac
     4921 caaaaattca atcgcaaaac attttttaag aaacgccgat gaactcatag aaaatataca
     4981 ctatttctac gattatgagc aaaccaaagg cggaagacaa agagtaatca aatggacttt
     5041 agaaggtgtt tataaacttt ttgataaaat taagaaatta aaagaaagga ataaaatggc
     5101 agaagagaaa gaaaatattg ttaattttaa aataaaaatt atccatgaag aaaacataga
     5161 acttgggata atggctaatt ctttgttaag ttttcaaaaa ttaatggata gttttatatc
     5221 aaaagaacac ggtataacac aaagtaaaat ttttttagaa aaagttgaaa ctggcagtga
     5281 tatatattct ttggtttttg aaatagcagg agaagttttg cctattattg cacctattca
     5341 agcattaaat gaatttatag aacttatcat atcttttaaa aatatcaaat caaaaagtat
     5401 agaagaaata gaagaaaatc cgcattttac taagtataat gccaataatt taaaaaatat
     5461 atttgcaccc gttactataa atcaaaatgc tttttttatc aatcataaag gtgaagaact
     5521 tttgagaata aatagtgatg aagctgagct tatttatgaa aatgctaatt acatttgcga
     5581 aaaaaaggaa attgaatatc aaaagataca tgaaaatgct ttgataacga tgtataaaac
     5641 tacaaataaa atagacaata aaacaaaaca taaggcaaag tgcgatgctt taagtcctta
     5701 tgcggttgat gttagtttta gtgatgagaa aatagccgaa gaagttttga aaaatcctta
     5761 tggatttaat tttttagtag atttagagta ttataagaac gataaaaata aaattatttt
     5821 atatagaatt tttaacataa aagataaaat atctttagaa taaaagaaag gagtaaaatg
     5881 gcagaagaga aactactaaa atctttggca gatggtgttt taaaaataaa tgaaagctct
     5941 attgatgtgg cagttttaga aaatggagta agaattatta cccatagcgg agtatttaga
     6001 gccttaggaa gagaaccaag aggaaatgca aggctagatc aaatacccgc ttttatggat
     6061 gcgaaaaatc tccaaccgct gatttcttcg gaacttaaaa ctcagatcag ccgaatttca
     6121 tatttagata aaaacagcaa agttaaagaa ggttataatg cggatatatt acccttagtg
     6181 gctgatttat atttaaaagc aagagaagaa ggtattttaa cccaagcaca aatagaaaca
     6241 gcaaaaaaag cagagatttt aattcgttct ttggctagac ttggaattac agctttagtt
     6301 gatgaagcta caggatatca gtatgagcgt gagcgtgacg aacttcaaaa gatactaaaa
     6361 gcctacatca gcgaagaact tttaaaatgg gaaaaacgtt ttcccgatga cttttacaaa
     6421 gaaatattta gacttaacgg ctgggatttt actgttagcg gtatcaaaaa acgccccggt
     6481 gttatcggta aatggacgaa tacgcttatt tacaacgaac ttcctgcagg tgttttgcaa
     6541 gaattaaaag aaaatacgcc caaacacgcg cgctatcatc aacgcctaac acccgacatc
     6601 ggacaaccaa acttaacggc acaaatatat aaagttatag gcattatgca aagtagcgac
     6661 aatatgcaag aaatgtggga acgctttaaa aagattaaag caagagaaca agacgatagt
     6721 gtagaatttg acgaaaacgg aaggataaag gagtagcatg gcagaagaga aagaaagtaa
     6781 ggggagttat aatttacaga ttaaaattcc aaatgagcta aaagacaaac tagaaaaaaa
     6841 agctgaaaaa gctggagtgt ctttaaacca gtatataatg tatcttttta ttgatgatat
     6901 taaaaacgaa cggatttaaa atccgagcgt taatctaatt tcaatgctac atcattatta
     6961 tttttatgaa aaaataatta aatagta
//
LOCUS       DAQUWA010000085         6698 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.085, whole genome shotgun sequence.
ACCESSION   DAQUWA010000085 DAQUWA010000000
VERSION     DAQUWA010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6698
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.085"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            59..829
                     /gene="traF"
                     /locus_tag="R8X70_001657"
     CDS             59..829
                     /gene="traF"
                     /locus_tag="R8X70_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HEF2929415.1"
                     /translation="MKISTTILVLACFLQASTFFGDSKRGWFYYELADNNNTQEKNET
                     KIQKRMNADDLFIASIPLNNLDLLTAEEFTETFEKVRKIAIMNPTKTNVMTMQIMNKW
                     QVDQSEKFAKVWALNLLENPNLEYPEIRDDKFGRSEMFRQKQEKINNFYKAHQDDFSY
                     VVFVSDLNKEINEKQKGIYRSLQSDYGVNVEYVNVDERKDLISKFKLATTPENFFVYR
                     NSKGEAIWQRVKSGLTNKDDIINNTLFLFDNAILEKDK"
     gene            842..1516
                     /locus_tag="R8X70_001658"
     CDS             842..1516
                     /locus_tag="R8X70_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein ParM"
                     /protein_id="HEF2929416.1"
                     /translation="MKKIFFSTIILASVLYAGGSKEMVLGKTKDFAERDMIELIQEFI
                     EKNKAQIEQKAFKTREQARENVKNYQPKGLIPLKPALEDKIFYPDLTYTLDQDIKNAN
                     GDILYPKGFKFNPADYVKLSYAMVVINGNNKKEVEWFKKSGFSNQVSYRLLLSEGSYY
                     DLNQELKQEVFYLNPQIREKFKIEKTPSIIKQIDNKIQIHEICIPCMENNKTKIVDNN
                     LSIKEI"
     gene            1533..2531
                     /locus_tag="R8X70_001659"
     CDS             1533..2531
                     /locus_tag="R8X70_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraU family protein"
                     /protein_id="HEF2929417.1"
                     /translation="MKFKAHLISAVAAACLFFHPSETKAVCAPNPSQILISLTELCWE
                     CIFPISIAGIQVIQGPMPDPQGSVGSPICICPAPPPLFFRIGIPIGYFEPSRMLDSVK
                     DPYCFVGLGFGMPEMLTASKGTKGDGHDRARVFYQSHYYIYPIIGMVGILIDAACMNI
                     TSGVDIAYMTEVDPLWQDDELTALINPEALLFGNPISNLACMADSVSAQANVALDPLF
                     WCKGSWGNAYPLSGNTGSKDYVEDAASVAGSMIYKLHRELILWESAGQLGLCGEYPMP
                     IWRKSSYRLQILAPVPHPMGMGIGQSGILWSFAKNYPVAGDNFTFMVFKKKECCAF"
     gene            2554..3216
                     /locus_tag="R8X70_001660"
     CDS             2554..3216
                     /locus_tag="R8X70_001660"
                     /inference="COORDINATES: protein motif:HMM:NF024949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEF2929418.1"
                     /translation="MFIKELRERLNLTQSEFAKNLNINQAIVSRYENKKLRPTSEFII
                     RLIKTFNANPNFIFFGKEPCLNENTYKNEISQELNQLIDELSLYENEKNIISELENSA
                     LEKIISLVSDKEIWEKLFSLLFKIDRKLYTITLFICRVSKRLEEKSETHKAYLASIIN
                     SFNDKDFSKLNECMKMDLITLFNEKFTEEESNIIIEDCLVVFKHIEKTAPIHKMIELG
                     KN"
     gene            3232..4176
                     /locus_tag="R8X70_001661"
     CDS             3232..4176
                     /locus_tag="R8X70_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929419.1"
                     /translation="MKKQIIGSILLCSSLFAIDDNLTKEQIFHNKYLKDKAAMQNKIS
                     VDELYKNTKDFNLSSMRQDMNLTKDEIKKRYDIKFNQSAEANKSAKIVSDMRRSDAFE
                     KKIVDNQNYILYDKSMNFNEYLGEYSQNTKDMINQMENSKHLISTNKYLNPNEKIFIV
                     ISSSMDKSSIQNYFKLLENVKTDITFVLRGLVGNDARYINPTFSYLQDLLVKDPNNKN
                     KEDKNNFYYYNIEINPKVTRRFNITKVPAVIFIKNYDPIVEDYQKMTNTPADTNEEYF
                     VAYGETSINYALSEINKQAKSDGLARFIQNMNSNFYTK"
     gene            4186..5034
                     /locus_tag="R8X70_001662"
     CDS             4186..5034
                     /locus_tag="R8X70_001662"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929420.1"
                     /translation="MNCFKKLKEKIILIKIEKEKANKEKFLKECEIKEAEIRMEILEK
                     RKDDLFKQREELIHSILDEASFNALTEERYLELFDNYHILTEDHKANLYGILRRAYNL
                     NSMVRDLKCLDKSINELEEEEDKQVEILKRKKTNSHIKKEEKMEKNAVEILNNIKTDE
                     FSNTINIIKVIEIENILEFKDLVDIFVNDKYKIEAKATKYLEVVLNKTEFFRTYLESK
                     ISKEFSEYHAKEQEKDYFGKFLKTLEKGLDNLTGETEEDRAKFKKHVKEIFEKIFNKK
                     ENNENK"
     gene            5021..5803
                     /locus_tag="R8X70_001663"
     CDS             5021..5803
                     /locus_tag="R8X70_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement resistance protein TraT"
                     /protein_id="HEF2929421.1"
                     /translation="MKINKTIFKTGMCSVLAASLLTGCLTTTLQTNATMSQSIFLDPV
                     AKEKRIVFLNIKNTSGHDVNLEPKLRSALEAKGYKVIDDPDKANYILSTNILYCDKKQ
                     ENNAVGGAVAGGATGVAVSGYNGGGAGGMVAAGAAGALVGGLLGKLTEDTIWQMQVDI
                     NIKQKADGKVLTSSGNVSGQASVRDSQSSGFLNSFGGNVRSDKVGHLNSNQINNTQQT
                     YEGKYIEKNTIIFAEAVKTGLKLPEATPILEDKIANQIAGLF"
     gene            5816..6244
                     /locus_tag="R8X70_001664"
     CDS             5816..6244
                     /locus_tag="R8X70_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEF2929422.1"
                     /translation="MIKKIRILFLAIFLAFSPMVLEAKIYDDVYVAQKQALKEAKLMI
                     FFVVSNTCEYCHKLMNDVLNNRDLMEYLNKNFIVAISDLNANGLIPKDLLFNGVTPTT
                     YILTPTGKVIGTPIEGAVDSDILFGLLKGLEDYKKGQLGF"
     gene            6246..>6698
                     /locus_tag="R8X70_001665"
     CDS             6246..>6698
                     /locus_tag="R8X70_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929423.1"
                     /translation="MEKNIEKLILEAYEDSKTKFDHVTTGHISQYLKRKYDLKINCSK
                     ALIEAGFDLEKDENEPSLVYVKKATTRNKTSNRDQIQNKVEEKPLLFQFAYFPNFLNT
                     LQELSNITQKEFWGNGNNILFSYLFKYFEFIYENKSYPDIITYNKDKTK"
BASE COUNT         2685 a          834 c         1104 g         2075 t
ORIGIN      
        1 atttttttaa aaataatgat ataattattc aaatatttta taattaaggt tttttacggt
       61 gaaaatatct actacaattc ttgttctcgc ttgttttttg caagcaagca ctttttttgg
      121 agactcaaag cgtggttggt tttactacga gcttgctgat aataacaaca cacaagaaaa
      181 aaatgaaacc aaaatccaaa aaagaatgaa tgcagatgat ttatttattg cttctatacc
      241 tttaaataat ttagatcttt taacagccga agaatttacc gaaaccttcg aaaaagttag
      301 aaaaatagcc atcatgaatc ctacaaaaac aaatgtgatg acaatgcaaa ttatgaataa
      361 gtggcaagtt gatcaatctg aaaaatttgc taaagtttgg gctttaaatc ttttagaaaa
      421 tccaaactta gagtatccag aaattcgtga tgacaaattt ggtagaagcg aaatgtttag
      481 acaaaaacaa gaaaaaataa ataattttta taaagctcat caggatgatt tttcttatgt
      541 tgtttttgtt agcgatttaa ataaagaaat taatgaaaaa caaaaaggca tatatcgctc
      601 gctacaaagt gattatggtg taaatgttga atatgttaat gtagatgagc gtaaagactt
      661 aatttcgaaa tttaaacttg caacaactcc tgaaaatttc tttgtttata gaaattcaaa
      721 aggagaagca atttggcaaa gagttaaatc aggacttaca aacaaagatg acatcatcaa
      781 taatacttta tttttatttg ataatgcaat tttagaaaaa gataaataat taaggataga
      841 tatgaaaaaa atatttttta gtactataat tttagctagt gttctatacg caggcggcag
      901 caaagaaatg gttttaggca aaactaaaga ttttgcagaa agagatatga tagagcttat
      961 acaagaattc attgaaaaaa ataaagcaca aatagaacaa aaagctttca agactcgaga
     1021 acaagcaaga gaaaatgtca aaaattatca acctaaagga ttaattccat taaaacctgc
     1081 ccttgaggat aaaatctttt atcctgactt aacatacact ttggatcaag atattaaaaa
     1141 tgcaaatgga gatattttat atccaaaggg ttttaaattt aatcctgctg attatgtaaa
     1201 gctttcatat gcaatggtag ttattaatgg taacaataaa aaagaagttg aatggtttaa
     1261 aaaaagtggt ttttctaatc aagtttctta tagattattg ctctcagaag gaagttacta
     1321 tgatttaaac caagagctta agcaagaagt attttatttg aatccacaaa ttcgagaaaa
     1381 atttaagata gaaaaaactc caagcattat aaaacaaatt gacaataaga tacagattca
     1441 tgagatttgt attccttgca tggagaataa taaaactaaa atcgttgaca ataatttaag
     1501 cataaaagaa atttaaaaaa agggaaatta atatgaaatt caaggctcat ttaatcagcg
     1561 cagtagctgc tgcttgttta ttttttcacc caagcgagac taaagctgtt tgcgctccaa
     1621 atccaagtca aatacttata agtctaacag aactttgttg ggaatgtatt tttcctatta
     1681 gtatcgcagg gatacaagtt atacaaggac ctatgcctga tccgcaaggt tcagtaggct
     1741 ctcctatatg tatatgccct gctccaccac ctttattttt tcgcatagga attcctatag
     1801 gatattttga gcctagtaga atgttagata gcgtaaaaga tccttattgt tttgtgggac
     1861 taggttttgg tatgcctgaa atgcttacag cttcaaaagg aaccaaaggt gatggacatg
     1921 atagagcaag agtcttttat caatctcact attatatata tcctattatt ggcatggtag
     1981 gaattttaat tgatgctgca tgtatgaata ttacaagtgg cgtggatata gcttatatga
     2041 ccgaagtaga tcccttatgg caagatgatg aactaacagc cttgatcaat cctgaggctt
     2101 tattatttgg caatcctatt tcaaatcttg cttgtatggc agatagcgta tcagctcaag
     2161 ccaatgtggc tttagatcca ttgttttggt gtaagggttc ttgggggaat gcttacccac
     2221 tttcaggtaa tacaggctca aaagattatg tggaagatgc tgcttctgtt gcaggttcta
     2281 tgatttataa acttcataga gaattaatac tttgggaaag tgcaggacaa ttagggcttt
     2341 gcggagaata ccctatgcct atttggagaa aatcttccta tagattgcaa attttagcac
     2401 ctgttccaca tcctatgggt atgggcatag gacaaagtgg tatcttatgg agctttgcca
     2461 aaaattatcc tgtagcagga gataatttca cttttatggt ttttaagaaa aaagagtgtt
     2521 gtgcattcta gtatataaaa tggaggtttt gttgtgttta taaaagaact tagagaaaga
     2581 ttaaatttaa ctcaatcaga atttgcaaaa aacttaaaca tcaatcaagc aattgtttca
     2641 aggtacgaaa ataaaaaatt gagaccaaca agcgagttta ttataagatt gatcaaaacc
     2701 ttcaatgcaa atccaaactt tatttttttt ggaaaagagc cttgtttgaa tgaaaatact
     2761 tacaaaaatg aaatttcaca agaattaaat caattaattg atgaattgtc tttgtatgaa
     2821 aatgaaaaaa atattatttc agaacttgag aacagtgcct tagaaaagat tatttctctt
     2881 gtttctgata aagaaatttg ggaaaaacta ttttcattat tatttaaaat agacagaaaa
     2941 ttatacacta taactttgtt tatttgtagg gtaagcaaaa ggcttgaaga aaaaagtgaa
     3001 acacataaag catatctagc ttcaattatt aatagcttta atgataaaga ttttagcaaa
     3061 ttaaacgagt gtatgaaaat ggatttaatt acacttttta atgaaaaatt tactgaagaa
     3121 gaatcaaaca ttataatcga agattgcttg gttgttttta agcatattga aaaaacagct
     3181 cctattcata aaatgataga gcttggaaaa aactaacaag aaaggaaaga aatgaaaaaa
     3241 caaatcatag gttctatttt gctatgttca tcattatttg caatcgatga taatttgaca
     3301 aaagaacaaa tatttcataa taaatattta aaagataaag ctgcaatgca aaataaaatt
     3361 tcagtcgatg agctttataa aaacactaaa gattttaacc ttagttctat gagacaagat
     3421 atgaatttaa caaaggatga aataaaaaaa agatatgaca taaagtttaa ccaaagcgca
     3481 gaagctaata aaagtgctaa aattgtttcc gatatgagaa gaagcgatgc ttttgaaaaa
     3541 aagattgtcg ataaccaaaa ctatattctg tatgataaaa gcatgaattt taatgaatat
     3601 cttggcgagt attcacaaaa cactaaagat atgattaatc aaatggaaaa ttctaaacac
     3661 cttatcagca caaacaaata tttaaatcct aatgaaaaaa tattcatagt gatctcttct
     3721 tcaatggaca aatcaagcat tcaaaactat tttaagttgc ttgaaaatgt aaaaaccgat
     3781 ataacctttg ttttaagagg attggttgga aatgatgcaa gatatattaa tcctactttt
     3841 tcttatttgc aagatctttt agttaaagac cctaataaca aaaataaaga agataaaaat
     3901 aatttttatt attacaatat tgaaattaat ccaaaagtaa ctagaagatt taatattact
     3961 aaagttcctg ctgtgatttt tattaaaaac tacgatccta ttgtagaaga ttatcagaaa
     4021 atgacaaaca cgcctgcaga taccaatgaa gaatattttg tggcttatgg tgaaacaagc
     4081 attaattatg ctttaagcga aataaataaa caagctaaaa gtgatggact tgcaagattt
     4141 attcaaaaca tgaatagcaa tttttatact aaataagggt gaaaaatgaa ttgttttaaa
     4201 aagctaaaag aaaaaataat actcataaaa atagaaaagg aaaaagcaaa caaagaaaaa
     4261 tttttaaaag agtgtgaaat caaagaagcg gaaataagaa tggaaattct tgaaaagcgt
     4321 aaagatgatt tatttaaaca aagagaagaa ttaattcatt ctattttaga tgaagcatct
     4381 tttaacgcac taaccgaaga aagatattta gaactatttg ataattatca cattctaaca
     4441 gaagatcata aagcaaattt gtatgggata ttaagaagag cttataatct taattcgatg
     4501 gtaagagatc ttaagtgcct tgataaaagt attaatgaat tagaagaaga ggaggataaa
     4561 caagttgaaa tattaaaaag aaaaaaaaca aattcacaca taaaaaagga ggaaaaaatg
     4621 gaaaaaaatg cagttgaaat tctaaataat atcaaaactg atgaattttc aaatacaatc
     4681 aatattataa aagttattga gattgaaaat attttagaat ttaaagatct agttgatatt
     4741 tttgtaaacg acaagtataa gatagaagca aaagctacta agtacttaga agttgtttta
     4801 aataaaacag aattttttag aacttactta gaatctaaaa tttctaaaga attttcagaa
     4861 taccatgcaa aagaacagga aaaggattat tttggaaagt ttcttaaaac tttagaaaaa
     4921 ggcttagata atttaacagg cgaaacagaa gaggatcgcg ctaaattcaa aaaacatgtc
     4981 aaagaaattt ttgaaaaaat atttaataaa aaggaaaaca atgaaaataa ataaaactat
     5041 ttttaaaaca ggaatgtgca gcgttttggc agctagttta ctcacaggtt gcttaacaac
     5101 tactttacaa actaatgcaa caatgagtca aagtattttt cttgatcctg tagctaagga
     5161 aaaaagaatt gtatttttaa atatcaaaaa tacaagcgga catgatgtaa atttagaacc
     5221 taaattaaga agtgctttgg aagctaaagg atataaagtt atagatgatc ctgataaagc
     5281 aaattatatt ttaagtacta atattttata ttgtgataaa aaacaagaaa ataatgctgt
     5341 aggcggtgct gttgcaggag gtgctacggg tgtggcagtt agtggctata atggcggcgg
     5401 tgcaggaggt atggttgctg caggtgctgc aggtgcttta gtaggaggac ttttaggaaa
     5461 acttaccgaa gatacaattt ggcaaatgca agtagatatt aatatcaagc aaaaagctga
     5521 tggtaaagtt ttaacttcta gtggtaatgt tagcggacaa gctagcgtaa gagattccca
     5581 aagctcaggc tttttaaata gctttggcgg aaatgttcgc agtgataaag taggacattt
     5641 aaattcaaat caaatcaata atacacaaca aacttatgaa ggcaaatata tagaaaaaaa
     5701 tactattatt tttgcagaag ctgtgaaaac aggacttaaa cttcctgaag ctacgcctat
     5761 tttagaagat aaaattgcaa atcagattgc aggattattc taaaaaggat attgcatgat
     5821 aaaaaaaata agaattttat ttttagccat ctttttagcc tttagcccta tggtgctaga
     5881 ggctaaaatc tacgatgatg tatatgtagc acaaaaacaa gcattaaaag aagcaaaatt
     5941 aatgattttt tttgtagttt caaacacttg cgaatattgt cacaagctta tgaatgatgt
     6001 gttaaataat agagatttaa tggaatacct taacaaaaat ttcattgttg ctatttctga
     6061 tttaaatgcc aatggattaa tacctaaaga cttattgttt aatggtgtaa ctccaacaac
     6121 ttatatttta actccaacag gaaaagtaat aggcactcct attgaaggag cggttgattc
     6181 tgacatactt tttggactat tgaaaggttt agaagattat aagaaaggac aattaggttt
     6241 ttagcgtgga aaaaaacata gaaaaattaa ttttagaagc ctatgaagat agtaaaacta
     6301 aatttgacca tgttactaca ggacatatca gtcaatattt gaaaagaaaa tatgatttaa
     6361 aaatcaattg tagtaaggca ttaatagaag caggctttga tcttgaaaaa gatgaaaacg
     6421 aaccttcttt agtttatgtt aaaaaagcta ccacaagaaa caagacttca aatcgtgatc
     6481 aaattcaaaa caaagttgaa gagaaacctt tgttgtttca atttgcctat tttccaaatt
     6541 ttctaaatac actccaagag ctttctaata taactcaaaa agaattttgg ggaaacggaa
     6601 ataatatttt attttcttat ctatttaaat attttgagtt catttacgaa aataaaagct
     6661 atcctgatat tattacttat aataaagaca aaacaaaa
//
LOCUS       DAQUWA010000086         6680 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.086, whole genome shotgun sequence.
ACCESSION   DAQUWA010000086 DAQUWA010000000
VERSION     DAQUWA010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6680
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.086"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..294)
                     /locus_tag="R8X70_001666"
     CDS             complement(<1..294)
                     /locus_tag="R8X70_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEF2929424.1"
                     /translation="MEANFKFQKEENKVFIFGIWDKTSVSKIKIKDLLSQISQTNCIF
                     DFSQLNEIDMAGVRFFLALEHDLKKNDILILKQGLNTRFKSLFELCEKNYQRIN"
     gene            complement(296..2194)
                     /gene="tkt"
                     /locus_tag="R8X70_001667"
     CDS             complement(296..2194)
                     /gene="tkt"
                     /locus_tag="R8X70_001667"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEF2929425.1"
                     /translation="MDLSILQEQANTLRFLSADMVQKANSGHPGAPLGMADILTVLSY
                     HLSHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLDDIKNFRQLHSKTPGHP
                     EISTQGVEIATGPLGQGIANAVGFAMAAKKAQNLLGKELINHKVYCLCGDGDLQEGIS
                     YEACSLAGLHKLDNLIIIYDSNEISIEGDVSLAFNEDVKMRFESQGFEVLSIDGHDYE
                     AIDKALKQAKEANKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEKAGFDP
                     NLNFYIPKAAKIRFESAVELGDLEEAKWKDKLEKSEKKELLEKLLNPDFSKINYPDFK
                     GKDLATRDSNGEILNALAKDLEGFLGGSADLAPSNKTELYGMGDFAEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKVKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFVLSRQKLKALNEP
                     VFGDVKNGAYLLKESKDAKFTLLASGSEVSLCLESANELEKQGFACNVISMPCFELFE
                     KQDKAYKDRLLQGEVIGVEAAHSNELYKFCDRVYGIESFGESGKDKDVFEHFGFSVPQ
                     ILNFILDK"
     gene            complement(2204..3043)
                     /locus_tag="R8X70_001668"
     CDS             complement(2204..3043)
                     /locus_tag="R8X70_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEF2929426.1"
                     /translation="MKELFIKHLENHLPKVQSFHPFFNEALAKMLKAGGKHFRAQLLL
                     GVVQNKAPHLIPNALNAALALEFIHTYSLIHDDLPAMDNADLRRGTPTLHKSYDETTA
                     ILVGDALNTEAFLLLSNLNLKESIKINLIRTLAFNAGINGMILGQAIDCYFEDKKLNL
                     EELEFLHTHKTAKLIAAALKMGCEICELDEKESEKIYQIGLKLGLIFQINDDIIDETM
                     SEEESGKPSKHDEHKNSFVNLLGLEKAIQSKENLINECKNDLGDLDANLAHMIKSLII
                     KYL"
     gene            complement(3040..4131)
                     /locus_tag="R8X70_001669"
     CDS             complement(3040..4131)
                     /locus_tag="R8X70_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEF2929427.1"
                     /translation="MKFLFFLVTFLISLSAIERPKFEDFAAGYERNKASMLNYEGMPA
                     FALSENLLAVLKQPNVKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWIGI
                     WDPNRAYIGHIKYLAQNIDEKDQLDFSTKVGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDVYWGDIGVDFAVRENKIYVNNVRKSGQFLINDEIISVDGTLVKDIRKLNEKI
                     LFADRGSTLYFQVLRDNVDLNISTEVFAKDLSKFNLPSNKPKPKPTNFRSNIGLSVNS
                     SLIVTKVDAGSKAALAGFMVGDKILRANNVTLKDFKELQTLLGTGNDFNILIERKSDK
                     LPLLGLNNDLGGVHSGGDGKFQFFIRLVK"
     gene            complement(4128..4433)
                     /locus_tag="R8X70_001670"
     CDS             complement(4128..4433)
                     /locus_tag="R8X70_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEF2929428.1"
                     /translation="MFENMDFSKMGELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDGSLLEDKESLQILLISAINDVLAMVAQNRSSLASDVLGGFGKL"
     gene            complement(4437..5720)
                     /locus_tag="R8X70_001671"
     CDS             complement(4437..5720)
                     /locus_tag="R8X70_001671"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEF2929429.1"
                     /translation="MKLKLDQSFITDNTLECEKDCYFLKTAQNMNFASDALEKGAKII
                     DVEECKKLLKIDENIKIIGITGTNGKTTTAAAIYSILLDLGFKCGLCGTRGAFINDEQ
                     IDEKSLTTSPILKTLEYLQLATQKKCDFFIMEVSSHALVQNRIEGLKFAAKIFTNITQ
                     DHLDFHGNFENYKAAKELFFTDESLKFINKDTLMIKFNVRNAFTYGIENPSLYQVKAY
                     SLEDGISAIVALKDQSFHIDSPLLGLFNLYNLLAASACVNELVKPNLKDLEKAISGFG
                     GVCGRVEQVANGVIVDFAHTPDGIEKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGKIV
                     EHFAKIAIITSDNPRSEEPKDIMNEILSGFQNPDKALMIEDRKEAINKALKLKEKDDL
                     VVILGKGDENTQEIKEIKHPFSDKAVVNEILKNQG"
     gene            complement(5704..6261)
                     /locus_tag="R8X70_001672"
     CDS             complement(5704..6261)
                     /locus_tag="R8X70_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEF2929430.1"
                     /translation="MQNYKKLGIEHFLRKDFKTAKIYFSLAYEKRKNKRLFHFITLCD
                     LALKSPKEALLLFEFYLEHYQIKNIDKDLEEILSTIELKNEKNTDETENEIQEAHTLN
                     YKDFLKSEEQIGFKKSFENIIHSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIESVM
                     PHFWANERFIKLQEKLIGFKSEIKA"
     gene            complement(6248..6520)
                     /locus_tag="R8X70_001673"
     CDS             complement(6248..6520)
                     /locus_tag="R8X70_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEF2929431.1"
                     /translation="MMPFSDEELINPVKASLDKSMPMLERDGGGLEFLGIKNGVVYVH
                     LIGACKGCASSGTTLKYGLERQLKIDIHPEITIVNLNGGAEDFAKL"
BASE COUNT         2062 a         1222 c          955 g         2441 t
ORIGIN      
        1 attaattctt tgatagtttt tttcacaaag ctcaaaaagg cttttaaagc gtgtgtttaa
       61 tccttgtttt aaaatcaaga tatcgttttt tttcaaatca tgctctagag caagaaaaaa
      121 tctcactcca gccatatcga tttcatttaa ttgactaaaa tcaaaaatac aatttgtttg
      181 agaaatttgg ctcaatagat ctttgatttt aatcttagac acactcgttt tatcccaaat
      241 tccaaaaata aaaactttat tttcttcttt ttgaaatttg aaatttgcct ccattttact
      301 tatcgagaat gaaatttaaa atttgtggaa cgctaaaacc aaaatgctca aatacatctt
      361 tatctttacc actttctcca aaactttcta tgccataaac cctatcgcag aatttataaa
      421 gctcattaga atgtgctgct tcaaccccta taacttcacc ctgtaaaagc ctatctttat
      481 aagctttatc ttgcttttca aagagttcaa aacaaggcat ggagattaca ttacaagcaa
      541 agccttgttt ttctaattca tttgcacttt ctaagcaaag agaaacctca cttccgcttg
      601 ctaaaagcgt aaatttagca tctttacttt ctttaagtaa atacgccccg ttttttacat
      661 caccaaaaac aggttcattt aaagccttaa gcttttggcg tgaaagtaca aaagcacttg
      721 gaatatctgc atttaaagct atttgccaag ctttaacatt ttccactcca tcagctggtc
      781 taaaggttaa gaaatttggc atagctctaa aagtgctgag ttgttcgata ggttgatgag
      841 ttggtccatc ttcgccaacg cctatgctat catgtgtgaa aatgaaaaaa tgtttgactt
      901 tcattaaagc tgctatccta gctgcgggtt ttaaatattc gctaaagata aaaaatgttg
      961 ctgaaaaagg taagaaaatt ccatatcttg caaaggcatt attgatcgca gccatagcgt
     1021 gttctctgat accaaaatga atattttttc cttccgcaaa atcacccatt ccataaagtt
     1081 cggttttatt agatggggct aagtccgcac ttccgcctaa aaatccttcc aaatctttag
     1141 ctagagcatt taaaatttct ccattactat ctcttgtagc taaatccttg cctttaaaat
     1201 caggataatt tatcttgcta aaatcaggat ttaaaagttt ttctaagagt tctttttttt
     1261 ctgatttttc gagcttatct ttccatttag cttcttctaa atctccaagt tctacagcac
     1321 tttcgaagcg aatttttgct gctttaggta tataaaaatt taaatttgga tcaaatcctg
     1381 ctttttcttt ggctttttta ataacctctt cacccaaagg tgcgccgtgg cttttgtgac
     1441 ttccttcaag ctctcctgcg ccttttgcta tggttgtttt tgcgatgata aggcaaggtt
     1501 tgttggcttc tttagcttgt tttagagcct tatcaattgc ttcataatcg tgtccatcga
     1561 tacttaaaac ttcaaagcct tgtgactcaa aacgcatttt tacatcttca ttaaaggcta
     1621 agcttacatc tccttcgata gaaatttcat tgctatcata gatgatgatt aaattatcaa
     1681 gtttatgaag tcctgctaaa gaacacgctt cataagaaat tccctcttgt aaatccccat
     1741 ctccacaaag acaataaacc ttgtgattga ttaattcttt tcctagtaag ttttgagctt
     1801 ttttagctgc catagcaaag cctacagcat tagctatacc ttgtcctaat gggcctgtag
     1861 caatctctac tccttgagtt gaaatttcag gatggcctgg agtttttgaa tgaagttggc
     1921 ggaaattttt aatatcatct aaacttaaat cataaccact taaatgcaaa aagctataaa
     1981 gcaaagcact ggcatgtccg cctgaaaaca caagcctatc gcggtttagc caagttgggt
     2041 ttttaggatt atgagaaaga tgataactta aaaccgttaa aatatcagcc attcccaagg
     2101 gtgcacctgg gtggcctgaa ttagcctttt gcaccatatc ggcacttaaa aatcttaaag
     2161 tatttgcttg ttcttgtaat atcgatagat ccatttgtaa cctttataaa tatttaatta
     2221 ttaaactttt aatcatgtgt gctaaattag catcaagatc accaagatca tttttacact
     2281 cattaatcaa attttcctta ctttgaatag ccttttcaag tcctaataaa ttcacaaaag
     2341 aatttttatg ctcatcatgt ttgcttggct ttccactttc ttcttcgctc attgtttcat
     2401 cgatgatatc atcattgatt tgaaaaataa gtccaagttt tagacctatt tgataaattt
     2461 tttcgctttc tttttcatcg agttcgcaaa tttcgcagcc catttttaaa gccgctgcta
     2521 taagttttgc ggttttatgt gtgtgtaaaa actcaagttc ttctaaattt aattttttat
     2581 cttcaaaata acaatcaata gcctgaccca aaatcatacc attgattcct gcattaaaag
     2641 ctagagttct aatcagatta attttaatgc tttcttttaa atttaaatta gatagaagta
     2701 aaaaagcttc ggtatttaaa gcatcgccta ctaaaatagc tgtagtttca tcatagcttt
     2761 tatgcaaagt aggcgttccg cgtcttaaat ctgcattatc catagcaggt aaatcatcgt
     2821 gtatgagcga gtaagtatgg ataaattcta aggccaaagc cgcgtttagg gcattgggga
     2881 taagatgagg tgctttattt tgaacaactc ctaagagtaa ttgagcacga aagtgttttc
     2941 cacctgcttt tagcatcttt gccaaagctt cattaaaaaa aggatggaag ctttgaactt
     3001 ttggtagatg attttctaaa tgtttgataa agagttcttt cactttacaa gccttatgaa
     3061 aaattgaaat tttccatctc cacctgaatg aactcctcct aaatcattgt ttaatcccaa
     3121 taaaggaagt ttatcacttt tgcgttcgat taaaatatta aaatcatttc ctgtaccaag
     3181 tagggtttga agttctttaa aatcttttag tgtcacattg tttgcgcgca aaattttatc
     3241 ccctaccata aatcctgcta aagcagcttt agagcctgcg tctacttttg taactataag
     3301 acttgaattt acacttagac ctatattgct tctaaaattg gttggttttg gttttggttt
     3361 attgcttggg agattaaatt tgcttaaatc tttggcaaaa acttcagtag aaatatttaa
     3421 atccacatta tctcgcaata cttgaaaata aagtgtgctt ccacgatctg caaagagaat
     3481 tttttcattt agctttctta tatctttaac tagtgttcca tctacgctta tgatttcatc
     3541 gttgattaga aattgcccac tttttcgaac attattcaca taaattttat tttcacgcac
     3601 cgcaaaatca acccctatat cgccccaata tacatcgtta tatttcataa aatgctttaa
     3661 gtaacgattt cctataaagg agctattatt aagagcaatt cccatcattt cgcagcaagg
     3721 agtgcctaaa agccccactt tggtagaaaa atcaagctga tctttttcat caatattttg
     3781 cgcaagatat ttaatgtgac ctatataagc tctattagga tcccaaattc ctatccaatc
     3841 attgcgtgta agtttttctt catctcccat aggtgtaggg attaagctaa aatcagttct
     3901 tacaagataa agatttaaaa atggatcata ttttacatat ttattgagtt tgacattagg
     3961 ttgttttaaa accgcaagta aattttcact caaggcaaaa gcaggcattc cttcataatt
     4021 aagcatactg gctttatttc tttcgtagcc tgcagcaaaa tcttcaaatt taggacgctc
     4081 gattgcactt agggatatta aaaaggttac taaaaaaaac aaaaatttca taatttccca
     4141 aatcctccta aaacatcact ggctaagctt gatcgatttt gtgctaccat agctaaaaca
     4201 tcatttatag cagaaatgag taaaatttgt aaagattctt tatcttcaag taaagaacca
     4261 tcaatgctaa catcgataat ctcacccttg ccattagcac tgactttcac aagtcctgcc
     4321 ccacttttag cactaaattc tcgattggct aactctaatt ctatattttt tgctttttct
     4381 tgaacttgat ttaaaagttc tcccatctta gaaaaatcca tattttcaaa catttattat
     4441 ccttgatttt ttaaaatttc attcacaacc gctttgtcgc taaaggggtg ttttatctct
     4501 ttgatttctt gggtattttc atcacccttg cctaaaataa ctactaaatc gtctttttct
     4561 ttaagtttta aagctttatt tatagcttct tttctatctt ctatcatcaa agctttatca
     4621 gggttttgaa agcctgatag aatttcattc atgatatctt taggttcttc gctacgcggg
     4681 ttatcacttg tgataatggc tatttttgca aaatgctcaa cgatttttcc cattaaaggt
     4741 cgtttggttt tatctctatc tccacctgct ccaaaaacta ctatgagttt tttatttttg
     4801 agtgtatcaa gtactttttc aatgccatca ggagtgtgag caaaatccac gattacgcca
     4861 ttagccactt gctcaaccct accacaaacc ccgccaaagc cactgatagc tttttctaag
     4921 tcttttaaat tcggctttac aagttcatta acacaagcac tagcggctag aagattataa
     4981 agattgaaaa gtcctagtag gggcgagtca atatgaaaac tttgatcttt taatgctaca
     5041 atagcactga taccatcttc taaagaataa gctttaactt gatacaaaga aggattttct
     5101 atgccataag taaaagcatt gcgcacatta aatttaatca ttaaagtatc tttgttgata
     5161 aattttaaac tctcatcggt aaaaaagagc tcttttgctg ctttatagtt ttcaaaattg
     5221 ccatgaaaat ccaaatgatc ttgagtaatg ttagtaaaaa ttttggctgc aaatttcaag
     5281 ccttcgatgc gattttgcac caaagcatgc gagctaactt ccataataaa aaaatcacat
     5341 tttttttgtg tggcaagttg taagtattct aaagttttta aaataggcga agtggttaaa
     5401 gacttttcat caatttgctc atcgttgata aaagctccac gagtgccaca aagtccacat
     5461 ttaaaaccta agtcaagtaa aatcgaataa atagccgctg cggtggtggt tttgccattg
     5521 gttcctgtaa ttcctatgat tttgatattt tcatcgattt ttaaaagttt tttgcattct
     5581 tctacatcaa tgatttttgc acctttttct aaggcatcac tagcaaaatt catattttgt
     5641 gcagttttta aaaaatagca atctttttcg cattctaagg tattgtcggt aataaaagac
     5701 tgatcaagct ttaatttcac ttttaaatcc tataagtttt tcttggagtt ttataaagcg
     5761 ttcgtttgcc caaaagtgcg gcataacgct ttctatatag tttaaagtca tatctttata
     5821 gccattatca agtaattttt ctaaaaaatc taaaaaatca tcacggttat caatgactaa
     5881 ttttgtgcta tgtataatat tttcaaaact ctttttaaag ccgatttgct cttcactttt
     5941 tagaaaatct ttgtagttta aagtatgagc ttcttgaatt tcattttctg tttcatcggt
     6001 atttttttca tttttaagct ctatagtgct taaaatttct tctaaatctt tatcgatatt
     6061 tttaatttga taatgttcta aataaaattc aaaaagtaat aacgcttctt ttggagattt
     6121 taaagctaga tcacaaagag tgataaaatg aaacaagcgt ttgtttttgc gtttttcata
     6181 agctaaagaa aaatatattt ttgctgtttt aaagtctttg cgtaaaaaat gctcgattcc
     6241 aagtttttta taattttgca aaatcttcag ctccaccgtt tagattaact atagtaattt
     6301 ctggatgtat atcgatttta agttgtcttt caagtccgta ttttaatgtc gttccacttg
     6361 aagcgcatcc tttgcaagcc ccaattaaat gaacataaac cacaccattt ttaatcccta
     6421 aaaattcaag accgcctcca tcgcgttcta acataggcat acttttatct aaacttgctt
     6481 ttacaggatt tataagctct tcatcgctaa aaggcatcat aatatatcct taataaattt
     6541 ttctatactt tagcgtgatt gtgtttaaaa aaaggtaaat cggatagttt tttcgttatt
     6601 tttctaaatg aagcttaaaa gggttcttca ttgtaatcat tttcagaatt attttttaaa
     6661 attttaatat ccaaattttt
//
LOCUS       DAQUWA010000087         6675 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.087, whole genome shotgun sequence.
ACCESSION   DAQUWA010000087 DAQUWA010000000
VERSION     DAQUWA010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6675
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.087"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..205
                     /locus_tag="R8X70_001674"
     CDS             <1..205
                     /locus_tag="R8X70_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929432.1"
                     /translation="SKELKKQEIFKLRVGTSLQPRLKFYGIEDSNTFYLKSIKNKDQL
                     DKNKKNITIKLGKFEKIYQIQRY"
     gene            174..941
                     /locus_tag="R8X70_001675"
     CDS             174..941
                     /locus_tag="R8X70_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEF2929433.1"
                     /translation="MKKFIKSKDTSDAFTLFELVLVVLILGLVISIAQINLKQDRLIQ
                     GAKQILNDIRYVRTLAMTQESFRDLELAVAKREWYKSRWQLYFINSAATNYEQTYTIF
                     LDKNGDGNANLGKTEINIDREIAVDIINPKKLMNSGQSGVIDKSDSKTTQRFNIFKKF
                     GIKKVEFKGSCRGSTRIVFDERGRLYSPLRTSQGVYDKNLAKTNQDCVIRLSSIQANQ
                     ICIIVNPLSGFTYIPKFQDFNKQMIMINGVLSQCSKI"
     gene            1010..2647
                     /locus_tag="R8X70_001676"
     CDS             1010..2647
                     /locus_tag="R8X70_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002803230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HEF2929434.1"
                     /translation="MNRLGISARLYLSFALIIFIMLFIAVFSIAKVNFLDKTLTAATG
                     ENALISRQAINFRGSIHDRSILIRDVVLAQDQEDLRKTLAQIQKLEKDYEEAELILND
                     IVAKGGGDSNVRSMMEDIAKTKKNTVQIYQKIIDAVVKENDIQSATKMVLDSARPEFI
                     LWLAQTNKLIDYQELANQELTQIALLESKSFRFIMMGIIIIALIISIVIAYLIVRYIK
                     KSVGGEPRDVNRIITEVANGNLTQPIHTEYKQSILYSISRMQNQLRNIVQKMITISNE
                     LNHKADLVVGRISETEKAVIFQGETSRESALKIREISQKTQNVSKMALETEENSKNTT
                     QVCQNNKKYAEDTASQMEYIASNSSRVSQQIALLSEHAKNIGTSTELISEITDQTNLL
                     ALNAAIEAARAGDVGRGFAVVADEIRKLAEKTGGATDQIAIINKQIQEETIATVGVIE
                     ESIPLISQGKSLSEEVRDSVDLIYKQANDSLFKAQEVNQEVAAQVKLMEEIEEKIITV
                     ADISSKTQQAVSENKNAMTELKNISDNLQAEIAIFKL"
     gene            3128..4640
                     /locus_tag="R8X70_001677"
     rRNA            3128..4640
                     /locus_tag="R8X70_001677"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            4741..4816
                     /locus_tag="R8X70_001678"
     tRNA            4741..4816
                     /locus_tag="R8X70_001678"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4774..4776,aa:Ala,seq:tgc)
     gene            4824..4900
                     /locus_tag="R8X70_001679"
     tRNA            4824..4900
                     /locus_tag="R8X70_001679"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4858..4860,aa:Ile,seq:gat)
     gene            5509..>6675
                     /locus_tag="R8X70_001680"
     rRNA            5509..>6675
                     /locus_tag="R8X70_001680"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         2304 a         1078 c         1394 g         1899 t
ORIGIN      
        1 aagcaaagag cttaaaaaac aagaaatttt taaattaaga gttggcacat ctttgcagcc
       61 aagattgaaa ttctatggta ttgaagatag taatactttt tatctaaaaa gtattaaaaa
      121 taaagaccag cttgataaaa ataaaaaaaa tattacaata aagctaggaa aatttgaaaa
      181 aatttatcaa atccaaagat actagtgatg cttttacgct ttttgagcta gttttagttg
      241 ttttaatctt aggccttgtg atttccatag cacaaatcaa tctaaaacaa gatagactca
      301 tacaaggtgc aaagcaaatt cttaatgaca tacgctatgt aagaacttta gcaatgactc
      361 aagagagttt tagggatttg gaattagcag tggcaaaaag agagtggtat aaaagtagat
      421 ggcaattata ttttatcaat tcagcagcaa caaattatga gcaaacttat acgatatttt
      481 tagataaaaa tggtgatgga aacgctaatt taggaaaaac tgaaatcaat attgatcgtg
      541 aaattgctgt agatattata aaccccaaaa aattaatgaa ttcaggacaa agtggagtta
      601 ttgataagag cgatagtaag actactcaaa gatttaatat ttttaaaaaa tttggtataa
      661 aaaaagtaga atttaaaggt tcgtgtaggg gttctacaag gatagttttt gatgaaagag
      721 gaagattata ttctcctttg cgaacttctc aaggtgttta tgataaaaat ttagctaaaa
      781 ctaatcaaga ctgtgtcata cgcttaagct caatacaggc aaatcaaatt tgcattatag
      841 tcaatccgct tagtggtttt acttacatac ctaaatttca agattttaac aagcaaatga
      901 taatgataaa tggtgtactt tctcaatgtt ctaaaattta gaatgcttta atttttaata
      961 taaatttgct ataatttgaa tgcaaatatt aaacaaaaag gagaaaataa tgaaccgctt
     1021 aggaatttcg gcaagattgt atttaagttt tgctttgatt atttttatta tgttgtttat
     1081 agctgttttt tcaatagcta aagtgaattt tttagataaa actcttacag cagcaacagg
     1141 ggaaaacgct ttgatttctc gtcaagcgat taattttagg ggaagtatcc atgatagatc
     1201 aattttaatt cgtgatgtcg ttttagcaca agatcaggaa gacttaagaa aaactttagc
     1261 tcaaatacaa aaattggaaa aagattatga agaagctgag cttattttaa atgatattgt
     1321 agctaagggt ggtggtgatt caaatgtacg ctctatgatg gaggatattg caaaaactaa
     1381 gaaaaatacc gtgcaaattt atcaaaagat tattgacgca gtggtgaaag aaaatgatat
     1441 tcaatcagca actaaaatgg ttttagattc tgctagacca gaatttattt tatggttggc
     1501 tcaaacaaat aaattgattg attatcaaga attagctaat caagaattaa ctcaaatagc
     1561 acttttagaa agtaaatcct ttcgatttat catgatgggt atcattataa ttgctttaat
     1621 tatttctata gttattgctt atttgatagt gagatatatt aaaaaatccg taggtggtga
     1681 accaagagat gtaaatagaa ttatcaccga agttgctaat ggaaatttaa cacagccaat
     1741 tcatacagaa tataaacaaa gtatacttta ttctatttct agaatgcaaa atcaattacg
     1801 aaatatagtc caaaaaatga ttactatttc taatgagtta aaccacaaag ctgatttggt
     1861 ggtaggtcgt ataagtgaaa ctgaaaaggc agtgattttt caaggtgaaa cttctagaga
     1921 atctgctctt aaaattcgag aaatcagtca aaaaacacaa aatgtttcca aaatggctct
     1981 agaaacagaa gaaaattcaa aaaataccac tcaagtttgt cagaataata aaaaatatgc
     2041 cgaggataca gcttctcaaa tggaatatat cgcaagcaat tcttctagag tttctcagca
     2101 aattgccttg cttagcgaac atgctaagaa tataggaaca agtacagaac ttattagcga
     2161 gattacagat caaactaatt tacttgctct aaacgcagcc atagaagctg ctagagcagg
     2221 agatgtaggt agaggttttg ccgtcgttgc tgatgaaatt cgtaaattgg ctgaaaaaac
     2281 aggcggggca acagatcaaa ttgctataat taacaaacaa attcaagaag aaacgatagc
     2341 aacagtaggc gttatagaag agtctatacc attgatttct caaggtaaaa gtttaagtga
     2401 agaggtaaga gatagtgtgg atttaatcta caaacaagct aatgacagtc tttttaaagc
     2461 acaagaggta aatcaagagg tagccgctca agtaaaatta atggaagaaa ttgaagaaaa
     2521 aattataaca gtggcagata tttcttctaa aactcaacaa gcggttagtg aaaataaaaa
     2581 tgcaatgaca gaactaaaaa atatttcgga taatcttcaa gctgaaatag ctattttcaa
     2641 gctctaagca cctataaccc ctaaccaccc aaaaataagg ctaaatttct agccttattt
     2701 aatcctcctt taagcttaat tggttatact ttcatttcct ttttcagaaa aggacttaag
     2761 atctttaaat tatagtctaa agttaactaa agttaaatat aagattttat aaaccctatg
     2821 tttctagttt taaattaatc tttaatccta gctaaagcaa tctaagttta taaaacttta
     2881 ttattactaa actttattta catataataa acgatttttt gtttttgttc tttaaaatta
     2941 atattgttat ttcaaatctt attagtcaat ctttgaaatc taaataagtg atcgattgag
     3001 ccagaaaaga tttaggcata agcaattatg taaaatctat tcaatctaat aattaaaaag
     3061 attaaaagct tttcttttaa tctttcataa ctttttcttt gaagaaaaag attaaactat
     3121 ctatattttt atggagagtt tgatcctggc tcagagtgaa cgctggcggc gtgcctaata
     3181 catgcaagtc gaacgatgaa gcttctagct tgctagaagt ggattagtgg cgcacgggtg
     3241 agtaaggtat agttaatctg ccctacacaa gaggacaaca gttggaaacg actgctaata
     3301 ctctatactc ctgcttaaca caagttgagt agggaaagtt tttcggtgta ggatgagact
     3361 atatagtatc agctagttgg taaggtaatg gcttaccaag gctatgacgc ttaactggtc
     3421 tgagaggatg atcagtcaca ctggaactga gacacggtcc agactcctac gggaggcagc
     3481 agtagggaat attgcgcaat gggggaaacc ctgacgcagc aacgccgcgt ggaggatgac
     3541 acttttcgga gcgtaaactc cttttcttag ggaagaattc tgacggtacc taaggaataa
     3601 gcaccggcta actccgtgcc agcagccgcg gtaatacgga gggtgcaagc gttactcgga
     3661 atcactgggc gtaaagggcg cgtaggcgga ttatcaagtc tcttgtgaaa tctaatggct
     3721 taaccattaa actgcttggg aaactgatag tctagagtga gggagaggca gatggaattg
     3781 gtggtgtagg ggtaaaatcc gtagatatca ccaagaatac ccattgcgaa ggcgatctgc
     3841 tggaactcaa ctgacgctaa ggcgcgaaag cgtggggagc aaacaggatt agataccctg
     3901 gtagtccacg ccctaaacga tgtacactag ttgttggggt gctagtcatc tcagtaatgc
     3961 agctaacgca ttaagtgtac cgcctgggga gtacggtcgc aagattaaaa ctcaaaggaa
     4021 tagacgggga cccgcacaag cggtggagca tgtggtttaa ttcgaagata cgcgaagaac
     4081 cttacctggg cttgatatcc taagaacctt ttagagataa gagggtgcta gcttgctaga
     4141 acttagagac aggtgctgca cggctgtcgt cagctcgtgt cgtgagatgt tgggttaagt
     4201 cccgcaacga gcgcaaccca cgtatttagt tgctaacggt tcggccgagc actctaaata
     4261 gactgccttc gtaaggagga ggaaggtgtg gacgacgtca agtcatcatg gcccttatgc
     4321 ccagggcgac acacgtgcta caatggcata tacaatgaga cgcaataccg cgaggtggag
     4381 caaatctata aaatatgtcc cagttcggat tgttctctgc aactcgagag catgaagccg
     4441 gaatcgctag taatcgtaga tcagccatgc tacggtgaat acgttcccgg gtcttgtact
     4501 caccgcccgt cacaccatgg gagttgattt cactcgaagc cggaatacta aactagttac
     4561 cgtccacagt ggaatcagcg actggggtga agtcgtaaca aggtaaccgt aggagaacct
     4621 gcggttggat cacctccttt ctagagtaca aagtaataag tctcacaact attacttcat
     4681 tataaactca attgattctt gtttagattt caaagattga tgataaagct aattgtttat
     4741 ggggaattag ctcagctggg agagcgcctg ctttgcacgc aggaggtcag cggttcgatc
     4801 ccgctattct ccaccattat taagggccta tagctcagct ggttagagtg cacccctgat
     4861 aagggtgagg tcacaagttc aagtcttgtt aggcccacca tagaagtatc aatcttaaaa
     4921 agataaaaac aagatttgaa atcaagcttt aaaatctaaa gcaagtatat atttataaat
     4981 atactttata taccatatac ttcctttagg ttttaaacct aaatgttctt tataattatc
     5041 attgttaaga gtcacaagca agttttaata aaaacaattt tacaggactt gttaaaggat
     5101 aaaactcaat tatcttttct ttggttttat ttatatcttt taactatctt tattttttat
     5161 aataaagaga atattagatc taaaatttta aattaaagat aagtttcaaa ctcacgactt
     5221 agtttagata tttttagtat ttatattaag tgtttgaatg ctttccgtct taagataatg
     5281 aagtcttatc gtaaaaactt taacaaggaa gtgatgcgtt ttagaatcaa taataaaagg
     5341 tagaagttag attatatcta acttttatgc atattcttag cagaagaagc aagaaagact
     5401 attagtcttt aacttacttt atcagcctaa tatcttttag gttggcgggg taggtcttta
     5461 gcttgcttct tagtcaaggc tttgccttga cgctaaagaa ggtaaaaaag gtaagctact
     5521 aagagcgaat ggtggatgcc ttgactggta aaggcgatga aggacgtact agactgcgat
     5581 aagctacggg gagctgtcaa gaagctttga tccgtagatt tccgaatggg gcaacccaat
     5641 gtatagagat atacattacc tatataggag cgaacgaggg gaattgaaac atcttagtac
     5701 cctcaggaaa agaaatcaat agagattgcg tcagtagcgg cgagcgaaag cgcaagaggg
     5761 caaacccagt gcttgcactg ggggttgtag gactgcaatg tgcaagaggt gagtttagca
     5821 gaacattctg gaaagtatag ccatagaggg tgatagtccc gtatgcgaaa aacaaacctt
     5881 agctagcagt atcctgagta gggcgggaca cgagaaatcc tgtctgaagc tgggtcgacc
     5941 acgatccaac cctaaatact aataccagat cgatagtgca caagtaccgt gagggaaagg
     6001 tgaaaagaac tgaggtgatc agagtgaaat agaacctgaa accatttgct tacaatcatt
     6061 cagagcccta tgtagcaata cagggtgatg gactgccttt tgcataatga gcctgcgagt
     6121 tgtggtgtct ggcaaggtta agcaaacgcg aagccgtagc gaaagcgagt ctgaataggg
     6181 cgcttagtca gatgctgcag acccgaaacg aagtgatcta tccatgagca agttgaagct
     6241 agtgtaagaa ctagtggagg actgaaccca taggcgttga aaagccccgg gatgacttgt
     6301 ggataggggt gaaaggccaa tcaaacttcg tgatagctgg ttctctccga aatatattta
     6361 ggtatagcgt tgtgtcgtaa tataaggggg tagagcactg aatgggctag ggcatacacc
     6421 aatgtaccaa accctatcaa actccgaata ccttatatgt aatcacagca gtcaggcggc
     6481 gagtgataaa atccgtcgtc aagagggaaa caacccagac taccagctaa ggtccctaaa
     6541 tcttacttaa gtggaaaacg atgtgaagtt acttaaacaa ccaggaggtt ggcttagaag
     6601 cagccatcct ttaaagaaag cgtaatagct cactggtcta gtgattttgc gcggaaaata
     6661 taacggggct aaagt
//
LOCUS       DAQUWA010000088         6521 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.088, whole genome shotgun sequence.
ACCESSION   DAQUWA010000088 DAQUWA010000000
VERSION     DAQUWA010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6521
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.088"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..431)
                     /locus_tag="R8X70_001681"
     CDS             complement(<1..431)
                     /locus_tag="R8X70_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEF2929435.1"
                     /translation="MQKIFDAHLHLWDLDKMPISWLKGNEKLEQNYDFFRAKEEYEGF
                     EFLGAMYVETNSDDLEKEALFALEQKKLHNLLLCLADLKYKEELSSFREVMHTSKKEA
                     KRLFEADFEEKIEILKTFNIPFEACMKNEELSFLEKFLNKNP"
     gene            complement(433..1674)
                     /gene="fucP"
                     /locus_tag="R8X70_001682"
     CDS             complement(433..1674)
                     /gene="fucP"
                     /locus_tag="R8X70_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HEF2929436.1"
                     /translation="MTDSKNIKIAIVLVTSLFFLWGVSYGLIDVMNKNFQNHLHISQH
                     ESGFLQFAYFGAYFIIALPAGYIANKYSYKMGIIFGLALYAVGALLIIPATNLASFHL
                     FLFAFFVLACGIGSLETSANPYMVKLGDEKNASFRINAAQSFNGLGQFVGPIIGGALF
                     LSITKQEEGASAEQIEAALLANMGNVQLVYVGIAAIVILILIAFVLNKLPEGSAVSDD
                     YKQKDDSKPIHVFKHRHFNLGLLAQFSYIANQVAAGAFFINYVVDHNEGLKDAQAAYY
                     FSIALVAFMLGRIVSTPLMKVIKGEKILGLYSLINVLICFGLYFTSGFLSTILLIALF
                     FFMSISFPTIFAVATKNLPLNQVKLGGSLLVMSIVGGAIMPLIIGFINDHYGTGMGYL
                     AMAPLFLYVAWYGFVGSKIKA"
     gene            complement(1685..2473)
                     /locus_tag="R8X70_001683"
     CDS             complement(1685..2473)
                     /locus_tag="R8X70_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEF2929437.1"
                     /translation="MDLKIKNKVCIITGGAKGIGYGIAKLWAMEGGIPVVFSRSMPKE
                     HDEELKNLCKSYEFYEIDLKNYEQIEELIKKVVTKHGGIYALVNNAGANDNLHIENTS
                     TKDLIKSYENNLFHYYAMAKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQ
                     IGFTREWACAFAKDSVRVNAIAPAEVMTPLYEKWLQNFSNPKEQYEKIAKTIPLGHRF
                     TTIEEIANTAVFTLSPLASHTTGQILMPDGGYVHLDRALNWDEI"
     gene            complement(2488..3759)
                     /locus_tag="R8X70_001684"
     CDS             complement(2488..3759)
                     /locus_tag="R8X70_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2929438.1"
                     /translation="MGHLKLTKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSH
                     IEMDAGISETAYALGAGIFFVGYALFEVPSNLLLHKLGAKIWLSRIMITWGLVTMAMI
                     FIQGETSFYILRFFLGLTEAGFSPGIILYLSYFFPAIYRSKAYGIYQMGVPIAFVFGS
                     LISGFILDYASNMYFKNWQWMFLIEGGITVLVGVFCLFYLDSHPKDAKWLDVKEKTVL
                     LKNIEICNSKAKDYSIKDIFKNILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINV
                     GFEVGLLNAIPWIFVFIALPIFTSLADKKRSWNLYAILFLLLASLSMIASTFVANLAP
                     FLFFISLAVIGFIVIQPIFWNLPTQVLKGKGGAAAIALIGSLGNLGGFVAPTLKTYIE
                     NHFGVEFGLITLALIAVLGVLILVHLKMTLN"
     gene            complement(3769..4935)
                     /locus_tag="R8X70_001685"
     CDS             complement(3769..4935)
                     /locus_tag="R8X70_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HEF2929439.1"
                     /translation="MKKIMGYRREDGKFGLRNKVIIIPSVHCANKVCENIARKCNGAV
                     YINHQHGCSQLEFDALQTRDVLIGHGSNANVFGVLIVGLGCEVIQAKVVAEKIKEATP
                     YKKVEYLVIQECGGSKNTIEKGIKIVNEMLESAAKLQKSEGDFSDLILGTECGGSDSY
                     SGLSANPALGSLSDFVIDEGGAVILAETTELIGCEAILAKRAKNDEIAKKVYDKILGY
                     ENLVKSFRADIRGANPSPGNIAGGLSTIEEKSLGCVYKAGTRTLMDVIDYAKPIVSKG
                     LTFMNTPGNDIEQLSAMVAGGANICVFTTGRGTPTGSAIVPTIKMSSNTFCYENMNDA
                     IDINAGSIIDGVKTKEEVRDELIELIVRISDGELVKAEINEQNDFSVWRLATTC"
     gene            complement(4938..5201)
                     /locus_tag="R8X70_001686"
     CDS             complement(4938..5201)
                     /locus_tag="R8X70_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HEF2929440.1"
                     /translation="MKGYIIVNEKDNVATALRDFKKGEKVANIELLNDIASGHKFALK
                     DIKKDEIIIKYAEAIASASCDISTGEWVHIHNTAGIRGRGDKE"
     gene            complement(5198..6106)
                     /locus_tag="R8X70_001687"
     CDS             complement(5198..6106)
                     /locus_tag="R8X70_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEF2929441.1"
                     /translation="MGILKGTLPALLTPYKDDGSINEKEFIHYCEFGISKGLNGLFCN
                     GSAGDSQALSIEEQVKLMRLTKEVAKNNVPIITGIASTIYQNTFTLAQKAYEIGLDAL
                     LLAMPYYYKLSEDALFEYVKDLSSKVKLPLYVYNIPLFAPALSLKFIERVSKLDNVVG
                     IKDSSGDALLLNHILDVLPSNFDVFVGREEFYVGALLAGAKGSMTSIGGVFPELMSEI
                     YKSINEKNIGRALLIQKSLLKAIRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPAT
                     KEELNTRFDEAKELIKTIEKETGIKL"
     gene            6339..>6521
                     /locus_tag="R8X70_001688"
     CDS             6339..>6521
                     /locus_tag="R8X70_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEF2929442.1"
                     /translation="MHQPTLRVLNILELLAKEKLTLSTIAKKLNIPAGTLWPILQTLQ
                     EKQYIRCDLKNKSYYLD"
BASE COUNT         2301 a         1292 c          769 g         2159 t
ORIGIN      
        1 ggatttttat ttaaaaattt ttctaaaaaa ctgagttctt catttttcat acaagcttca
       61 aaaggtatat tgaaagtttt taaaatttct attttttctt caaaatctgc ttcaaatagt
      121 cttttagctt cttttttact cgtgtgcatt acttccctaa aagagctaag ttcttcttta
      181 tattttaaat ccgctaaaca aagcaaaaga ttatgaagct ttttttgctc taaagcaaat
      241 aaagcttcct tttctaaatc atcgctattg gtttcaacat acatagcacc taaaaattca
      301 aatccttcat attcttcttt tgctctaaaa aaatcataat tttgctctaa tttttcattg
      361 ccttttaacc atgaaatagg cattttatcc aaatcccaaa gatgcaaatg tgcatcaaaa
      421 atcttttgca ttttaagcct ttatctttga gccaacaaaa ccataccaag ccacatataa
      481 aaataaaggt gccattgcta aataccccat acctgtgcca taatgatcat taataaaacc
      541 tataattaaa ggcataatcg ctccacctac tatactcatt acaagcaaag aaccgcctag
      601 ttttacttga tttaaaggca aattctttgt tgcaactgca aaaatagtag gaaaagagat
      661 agacataaag aaaaataaag caattaaaag aatagtactt aaaaaaccac tcgtaaaata
      721 caagccaaag catatgagta cattaattaa agaataaagt cctaaaattt tctcaccttt
      781 aatcactttc atcaaaggag tagaaacaat acgtcctagc ataaatgcaa ccaaagctat
      841 agaaaaataa taagcagctt gcgcatcttt taatccttca ttatgatcta ctacataatt
      901 aataaaaaac gcccctgctg caacttgatt tgctatatat gaaaattgcg ctaaaagtcc
      961 taaattaaaa tgtctgtgtt taaaaacatg tataggctta gaatcatctt tttgtttata
     1021 atcatcactt accgcacttc cttctggaag cttatttaga acaaaagcaa ttaaaatcaa
     1081 aataacaata gcagcaattc ctacataaac aagctgaaca ttacccatat tggctagcaa
     1141 tgcagcttcg atttgctccg cactcgcacc ctcttcttgc ttggtaatag ataaaaataa
     1201 agctccacct ataataggtc ctacaaattg tcccaaacca ttaaaacttt gtgcggcatt
     1261 gattctaaaa cttgcatttt tttcatctcc aagttttacc atgtaaggat ttgcactagt
     1321 ttctaaagaa ccaatgccac aagctaaaac aaaaaacgca aataaaaaca aatgaaaaga
     1381 agctaaattt gtagcaggta taataagcaa agcccctaca gcataaagtg ctaaaccgaa
     1441 aataatcccc attttataag aatacttatt ggctatataa cccgctggca aggctatgat
     1501 aaaataagct ccaaaataag caaattgtaa aaatccactt tcatgctggc taatgtgaag
     1561 atgattttga aaatttttat tcattacatc gataagccca taacttactc cccataaaaa
     1621 gaaaagagaa gtcaccaaaa caatagctat ttttatattc ttagaatcag tcatttttta
     1681 ctccttaaat ttcatcccaa ttcaatgctc tatccaaatg aacataacct ccatctggca
     1741 ttaaaatttg tcctgtagta tgtgaagcca aaggactaag tgtaaaaact gcagtatttg
     1801 caatctcttc tatagtggta aaacgatgtc ctaaaggtat agtttttgcg attttctcat
     1861 attgctcttt agggttagag aaattttgca accatttttc ataaagagga gtcataactt
     1921 cagctggtgc tatggcattt actctaacac tatctttagc aaaagcacaa gcccattccc
     1981 tagtaaaacc tatttgagca gcttttgccg aagcataagc tgaagttctt ccttgtcctg
     2041 tgatacctgt tttactcact atatttaaaa tactgccttg ctctttttta atataaggca
     2101 aacactcttt tgccatagca taataatgaa aaagattgtt ttcgtaagat ttaatcaaat
     2161 ctttagtgct tgtgttttca atatgcaaat tatcatttgc acctgcatta tttacaaggg
     2221 cataaattcc accatgtttt gtaacaactt tttttataag ttcttcaatt tgttcataat
     2281 tttttagatc aatttcataa aattcatagc ttttgcataa attttttaat tcttcgtcgt
     2341 gctctttagg catagatctt gaaaaaacta caggaattcc accctccata gcccataatt
     2401 tagcaatacc ataaccaatg cctttagcac cacctgtaat aatacaaacc ttatttttaa
     2461 tttttaaatc catttattct cctttatcta atttaaagtc atttttaaat gcactaatat
     2521 caatacgcct aaaactgcta ttaatgctag tgttataagt ccaaactcaa ccccaaaatg
     2581 attttctatg tatgttttta aagtcggtgc gacaaaacca cctaaatttc ctaaagaccc
     2641 tataagtgcg atagcagctg caccaccttt tccctttaaa acttgagttg gtaaattcca
     2701 aaatataggc tgaattacga taaaacctat aacagccaag ctaataaaaa ataaaaatgg
     2761 tgctaaattc gcaacaaaag tcgaagctat catgcttaaa cttgctaata ataaaaataa
     2821 aatcgcatat aaattccaag agcgtttttt atccgccaat gaggtaaata ttggcaaggc
     2881 gataaaaaca aaaatccaag gaatagcatt taaaagccct acttcaaaac ccacatttat
     2941 ttgcaatatt tgagctattt tacttggtaa ataaaaaaga acgccataaa cgcttaattg
     3001 tatgcaaaaa taaacaaata caaatttcca tactaaaata tttttaaaaa tatccttgat
     3061 agaataatct tttgccttgg aattacaaat ttctatattt tttaataaaa cagttttttc
     3121 ttttacatcc aaccatttag catcttttgg gtgagagtca agataaaaca aacaaaaaac
     3181 acccaccaaa acagtaattc cgccctcgat taaaaacatc cactgccaat ttttaaaata
     3241 catatttgat gcataatcaa gtataaaacc actgattaaa gaaccaaaaa caaaagctat
     3301 aggcacaccc atttgataaa ttccataagc ttttgatcga tatatagctg gaaaaaaata
     3361 actaagatac aaaataatcc ctggactaaa acctgcttca gtcaacccta gaaaaaacct
     3421 taatatataa aaacttgttt ctccttgtat aaaaatcata gccatagtta caagtcccca
     3481 agtgatcatt atgcgactta accaaatctt agctcctaat ttatgcaaaa gtaaatttga
     3541 aggcacttca aacaaagcat aaccaacaaa aaatatccca gcacccaaag catacgcagt
     3601 ttcgctaata cccgcatcca tttcgatgtg agatttcaca aaactaatat ttgtcctatc
     3661 aagcatagaa agacaaaaca tcaaaacaat taaaggtaga atacgccaag atattttctt
     3721 acaaaccagc tctaattttg ttaattttaa atgccccatt tttagtccct aacaagttgt
     3781 agcaagtctc caaactgaaa aatcattttg ctcgtttatt tcagctttta ccaattctcc
     3841 atctgaaatt cgcacgatta attctataag ctcatcacgc acttcttctt ttgtttttac
     3901 cccatctata atgcttcctg cgttaatatc aatagcatca ttcatatttt cataacaaaa
     3961 agtattagaa ctcattttaa ttgtaggcac aatagcagaa cccgttggag tgccacgacc
     4021 tgtagtaaaa acacaaatat ttgctccacc tgcaaccata gcactaagtt gttctatatc
     4081 attacctggc gtattcataa aagtaagtcc tttagaaact ataggtttgg cataatcaat
     4141 cacatccatt aaggttctgg ttcctgcttt ataaacacaa cctaaggatt tttcctctat
     4201 agtactaagc ccacctgcaa tgtttcccgg actagggttt gctcctcgaa tatcagcacg
     4261 aaaagacttg actaaattct cataacctaa aatcttatca tatacctttt tagctatttc
     4321 atcgtttttt gctctcttag caagtatagc ttcacaacct ataagctctg tagtttctgc
     4381 taaaattacc gcaccaccct catcaatgac aaaatcactc aaacttccta aagcaggatt
     4441 agcactaagt ccgctatagc tatcacttcc accgcattct gtgcctaaaa tcaaatcact
     4501 aaaatctcct tcactttttt gtaactttgc ggcactttca agcatttcat tgactatttt
     4561 aatacctttt tcaatagtat ttttactacc accgcattct tgtatcacta aatattcaac
     4621 ctttttataa ggcgttgctt ctttgatttt ttctgctact actttagctt gtattacctc
     4681 acaaccaagc cctacaatta aaacaccaaa aacattggca ttgctcccat gacctatcaa
     4741 aacatctctg gtttgcaaag catcaaattc aagctgggag caaccatgct gatggttgat
     4801 ataaaccgct ccattacatt ttctagctat attttcacac actttattag cacaatgtac
     4861 acttggtatg ataatgactt tatttcttaa gccaaatttt ccatcttctc ttctatagcc
     4921 cattatcttt ttcatattta ttccttatct ccacgacctc taattcccgc agtattatgg
     4981 atatgcaccc attcccctgt actaatatcg caacttgcac tagctatagc ttctgcgtat
     5041 ttgataataa tttcatcttt ttttatatcc tttagtgcaa atttatgtcc gcttgcaata
     5101 tcatttaaaa gctcaatatt tgccactttt tcgccttttt taaagtcacg caaagctgtg
     5161 gcaacattgt ctttttcatt gactataata tatcctttca tagttttata cctgtttctt
     5221 tttctatagt tttaataagc tcttttgctt catcaaagcg agtgtttaat tcttcttttg
     5281 tagcaggtga taaaggatga atactagcat ttacaaattc aaatcctctg gcctttaaaa
     5341 gcaaagcaaa acccatagga aaagctatgc tcataccaaa tcttatggcc tttaataaac
     5401 ttttttgtat tagcaaagct ctgcctatat ttttttcatt gattgatttg taaatttcgc
     5461 tcataagttc tggaaaaact ccacctatgc tagtcataga accttttgca cctgctaata
     5521 atgcacctac ataaaattct tctcttccta caaaaacatc aaaattgcta ggtagcacat
     5581 ctaaaatatg atttaaaagc aaagcatctc cactactatc ttttatacca acaacattat
     5641 caagctttga aactctttct ataaatttta agcttagtgc tggtgcaaaa agaggtatat
     5701 tataaacata caagggaagt ttcactttag aagatagatc ttttacatat tcaaaaagcg
     5761 catcttcact taatttataa taataaggca tagcaagcaa caaagcatca agacctattt
     5821 cataagcttt ttgtgccaaa gtaaaagtat tttgataaat tgttgaagca atacctgtaa
     5881 taatgggcac attatttttt gcaacttctt ttgtgagtct cattaattta acttgttctt
     5941 caatgcttaa agcttgagaa tctcccgcgc ttccattaca aaataatcca tttaaacctt
     6001 tagaaatacc aaattcacaa tagtgaataa attctttttc attaatactt ccatcatctt
     6061 tatatggagt aagcaaagcc ggtaaagttc cttttaaaat tcccattttt attttccttt
     6121 cgtatataca aaaatatatt tatatacaaa aaatataaca aaatatttgt aaaaaatcaa
     6181 attaagaata tggtgtaaaa ttcacattcc atccttaata actaccgatt cttacaaaaa
     6241 attatcgaaa tttatcaata aataattttt ttattttgtg ttactaaaag taaaaattat
     6301 gctagaattt ataaaaacaa aacaaggata aaagcattat gcatcagcct actcttagag
     6361 ttttaaatat tttagaactg ctggcaaaag aaaaacttac cttaagtact atagccaaaa
     6421 aactaaatat tccagctgga actctttggc ctattttgca aactctacaa gaaaaacaat
     6481 acatcagatg cgatttaaag aataaaagct attatttaga t
//
LOCUS       DAQUWA010000089         5968 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.089, whole genome shotgun sequence.
ACCESSION   DAQUWA010000089 DAQUWA010000000
VERSION     DAQUWA010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5968
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.089"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            14..373
                     /locus_tag="R8X70_001689"
     CDS             14..373
                     /locus_tag="R8X70_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEF2929443.1"
                     /translation="MDIIFANQSLYYIPLKELKQNILEFYELLNTGGILFATMMSKKN
                     YYFSHSQKEEKNGLSKVEINGRLNETSFIHFIDKAQDLENLFQPFETLFLGDYDPINF
                     YNFEGSAHHYIYVGIKK"
     gene            413..1417
                     /gene="legI"
                     /locus_tag="R8X70_001690"
     CDS             413..1417
                     /gene="legI"
                     /locus_tag="R8X70_001690"
                     /EC_number="2.5.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetyllegionaminate synthase"
                     /protein_id="HEF2929444.1"
                     /translation="MKKTLIIAEAGVNHNGDLNLAKKLIEVAADSGADFVKFQSFKAK
                     NCISIKAKKAPYQLKTTASDESQLQMVQKLELDLKAHKELILHAKKCNIAFLSTPFDL
                     ESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLDKKIILSTGMANLGEIEQALNVLCK
                     NGTKRQNITLLHCTTEYPAPFDEINLKAMQSLKDAFKLDVGYSDHTRGIHISLAAVAL
                     GACVIEKHFTLDKNMSGPDHKASLEPQELKMLCTQIRQIQKAMGDGIKKASKSEQKNI
                     NIVRKSLVAKKDIQKGEIFNEGNLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE
                     "
     gene            1410..2564
                     /gene="legG"
                     /locus_tag="R8X70_001691"
     CDS             1410..2564
                     /gene="legG"
                     /locus_tag="R8X70_001691"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEF2929445.1"
                     /translation="MSKRKICIVSATRAEWYLLRNLCHEIQNDKDLSLQIIATGAHLS
                     PEFGLTYKEIEKEFKITKKIPILLANDDKISLCKSMSLAFSAFSDAFEDLKPDMVVIL
                     GDRYEMLSVASVCLLMHIPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKR
                     LLQLGEEEKRVFNIGSLASTIIKNMNFLNKKDLEKALEMKLDKELYLITYHPLTLNVK
                     NTQKEIKTLLKKLDTLKNASLIFTKANADENGLLINEILQNYCQKNSHKAKLFDNLGS
                     QKYLSLMKIAKAMIGNSSSGISESPFFKTPCINIGDRQKGRLRTQNIIDCEINDLDQA
                     FEKLESKEFKQILKNFKNPYDNDKNPNKLIKTCLKNVNLDTILHKNFIDL"
     gene            2573..3598
                     /locus_tag="R8X70_001692"
     CDS             2573..3598
                     /locus_tag="R8X70_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEF2929446.1"
                     /translation="MDINKLKLTPDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISD
                     SNIRKALISGKTLKDSIKDIYTKNPITIKENTSKEQLLRISAKTDIYDFPVLDEKGQI
                     LSIKSISSLLKANPNSIIIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIVQRLKNQ
                     NFENFIFCVNYKKQIIEDYFQKGQKFGVKISYIKERKKLGTAGALSLIKQEFKESFLV
                     MNADILTELDFNDLLKAHKKSKALMSVCVREFEQQIPYGVITQKQGFIENIEEKPTQK
                     FLVSAGIYVLENEILNLIAKNEYLDMPELIKLVLQKGKVNTYIINDYWIDIGRPDEFL
                     KANEDFK"
     gene            3595..4500
                     /gene="ptmF"
                     /locus_tag="R8X70_001693"
     CDS             3595..4500
                     /gene="ptmF"
                     /locus_tag="R8X70_001693"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamine-D-fructose-6-phosphate isomerase
                     subunit"
                     /protein_id="HEF2929447.1"
                     /translation="MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIY
                     RSLKECDLNEFDLFIIANITTEHFNTLKALNELVKDKIILVEKPLFEKSQNFTSLKNH
                     IYVAYLLRFHPVIVALKRLLKGEKIYFASLICNSYLPHWRALDYRQNYSAKKELGGGV
                     LLDLSHEIDLAFFLFGNLELIYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYF
                     SKFNKREIIIHTLEKSFKADLINNKIEIYHKNQSQKILNFENDTIKTLQNLHHAVFEK
                     DKELCDLKQALKVLEICDEVRKKNG"
     gene            4493..5200
                     /gene="legF"
                     /locus_tag="R8X70_001694"
                     /gene_synonym="ptmB"
     CDS             4493..5200
                     /gene="legF"
                     /locus_tag="R8X70_001694"
                     /gene_synonym="ptmB"
                     /EC_number="2.7.7.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N,N'-diacetyllegionaminic acid synthase"
                     /protein_id="HEF2929448.1"
                     /translation="MAEILCTICARGGSKGVKNKNIKKINELEMIAYSIIQAQNSKLF
                     KHIVISTDSDEIASVAQKYGAEVFFKREAHLANDRAAKLPVMRDALLRSEEHFKTCFE
                     TLIDLDASAPLRSSLDIKKAYESFVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSK
                     EGNFTTRQSAPKCYDMNASIYIFKRDYLLENDSVFGKNTGLFVMDESTAFDIDSELDF
                     KIVEFLISLKNLSPKDF"
     gene            5200..>5968
                     /locus_tag="R8X70_001695"
     CDS             5200..>5968
                     /locus_tag="R8X70_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEF2929449.1"
                     /translation="MLENKIIFVAGACGRIGKALCQKILLSKGIPILADINKERLNKL
                     QENLETNFKTKLLSLELDITKQESLQTALQKSQERYDKIDAFVNSSYPFGKDWGKTPY
                     YELKYEQICESLNLHLAGFMLAAQEFVKFFKQQGYGNIINLSSIMGVYAPKFENYEGT
                     SMQSSLEYSVIKAGINHMSSWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRKCCA
                     SKGMLDADDVCGTLVFLLSDESRFITGQTLVVDDGWGL"
BASE COUNT         2305 a          916 c          966 g         1781 t
ORIGIN      
        1 ttttgatgaa aatatggata ttatctttgc aaatcaaagt ctttactaca tacctctaaa
       61 agaacttaaa caaaatattt tagaatttta cgaactttta aacacaggtg gaatactttt
      121 tgctacaatg atgagcaaga aaaattatta tttttcccac agccaaaaag aagaaaaaaa
      181 tggcttgagt aaagttgaaa ttaatggaag attaaatgaa acaagcttta tacattttat
      241 tgataaagcc caagatctag aaaatctttt tcaacctttt gaaactttat ttttaggaga
      301 ttatgatcct attaattttt ataattttga aggatcagca caccattaca tttatgtagg
      361 tattaaaaaa taaaattttg cctttatttt aaggcaaaat aaaggcaaaa ctatgaaaaa
      421 aactcttatc atcgcagaag caggggttaa tcacaatggt gatttaaatt tggctaaaaa
      481 gttaatagaa gtcgcagcag actcaggggc tgattttgtt aaatttcaaa gttttaaagc
      541 caaaaactgc atcagtataa aggctaaaaa agcaccctat cagcttaaaa ccacagctag
      601 cgatgagagt caacttcaaa tggtgcaaaa acttgaactc gatcttaaag ctcacaaaga
      661 gcttatcttg cacgcaaaaa aatgcaatat cgcctttctt tctactcctt ttgatcttga
      721 aagtgtagat cttttaaatg agttaggctt aaaaatcttt aaaattccaa gcggagaaat
      781 caccaatcta ccctatctta aaaaaattgc aaaacttgat aaaaaaatca tactttcaac
      841 cggcatggca aatttaggtg agatagaaca agctttaaat gtgctttgca aaaacggtac
      901 taaacgccaa aacatcactc ttttacactg cactacagaa taccctgccc cttttgatga
      961 gatcaatctg aaagccatgc aaagcttaaa agatgctttt aaacttgatg tgggctattc
     1021 tgatcacaca aggggcatac acatttccct agctgcggtt gccttaggag cttgtgtgat
     1081 agaaaagcat tttaccctag ataaaaatat gtcaggacct gatcataaag caagtttaga
     1141 acctcaagaa ctaaaaatgc tttgcaccca aataagacaa atacaaaagg ctatgggtga
     1201 tggcataaaa aaagcaagta aaagcgaaca aaaaaatatc aacatagtaa gaaaaagttt
     1261 agtcgctaaa aaagatatcc aaaaaggaga aatttttaac gaaggaaatc ttactaccaa
     1321 acgccccgca aatggtataa gtgctatgag atatgaagag tttttaggta aaattgctac
     1381 taaaaactac aaagaagatg agcttatccg tgagtaaaag aaaaatttgt atagtcagtg
     1441 caacaagggc tgaatggtat cttttaagaa atttatgtca tgaaattcaa aacgataaag
     1501 atctaagcct tcaaatcatc gctacaggag cacatttaag ccctgagttt ggactcactt
     1561 ataaagaaat agaaaaagaa tttaaaatca ctaagaaaat tcctatccta cttgcaaatg
     1621 atgataaaat aagcctttgc aaaagcatga gtttagcttt tagtgctttt agcgatgctt
     1681 ttgaagactt aaaacctgat atggtggtaa ttttaggcga tcgttatgaa atgcttagcg
     1741 tagcaagtgt atgtcttttg atgcacatac ctttagtgca tttatgtggc ggggagctta
     1801 ctttaggggc tattgatgat agtataagac acagcatttc aaaaatgtca catttacatt
     1861 ttgtaagtca tgaaatttat aaaaaaaggc ttttgcaact tggagaagaa gaaaaaaggg
     1921 tttttaatat aggttcttta gcttctacta tcataaaaaa tatgaatttt ttaaacaaaa
     1981 aagatttaga aaaagcctta gaaatgaaac tagataaaga actttactta atcacttatc
     2041 atcctttaac cttaaatgta aaaaatactc aaaaagagat taaaacctta cttaaaaaac
     2101 ttgacaccct taaaaacgca agtttgattt ttaccaaagc aaatgccgat gaaaatggac
     2161 ttttaatcaa tgaaattttg caaaattact gccaaaaaaa ctcacacaag gctaaacttt
     2221 ttgataatct tggctcacaa aaatacctaa gtcttatgaa aatagccaag gccatgatag
     2281 gcaattcttc aagtggtatt agtgaaagtc ctttttttaa aactccttgc attaatatag
     2341 gcgatagaca aaaagggcgt ttaagaactc aaaatatcat tgattgtgaa attaatgatc
     2401 ttgatcaagc ttttgaaaaa ttagaaagca aagaatttaa acaaatttta aaaaatttta
     2461 aaaaccctta tgataatgat aaaaatccca ataaactcat aaaaacttgc ctaaaaaatg
     2521 taaatttaga tacaatttta cataaaaatt tcatcgattt ataaggctta gtgtggatat
     2581 aaacaaactc aaactcaccc ctgattctag cataaaagaa gctttaaaaa tagtcgggca
     2641 agagcgcgtt agattaggca ttatagttga taaaaaggat aaatttttag gagtcattag
     2701 cgattcaaac atcagaaaag ctttaattag tggcaaaact ttaaaagata gtatcaaaga
     2761 tatttacact aaaaatccca tcaccataaa agaaaacaca agcaaagaac agcttttaag
     2821 aatttctgct aaaaccgata tttacgactt tcctgtttta gatgaaaaag ggcaaattct
     2881 ttctataaaa tctatctcat cacttttaaa agccaatcca aactccatta tcatcatggc
     2941 tggaggctta ggctctcgct taaaagagct gactaaagat actccaaaac ctatgttaaa
     3001 agtaggcaaa aaacccattt tagaaagcat agtccaaaga cttaaaaatc aaaattttga
     3061 aaattttatc ttttgtgtga attataaaaa acaaatcata gaagattatt ttcaaaaagg
     3121 gcaaaaattt ggggttaaaa tttcttatat taaagagcgt aaaaaactag gtacagcagg
     3181 ggctttaagc cttataaaac aagaatttaa agaaagtttt ctcgttatga atgcagacat
     3241 tttaaccgag cttgatttta atgatctttt aaaagcccat aaaaaatcaa aagctttaat
     3301 gagcgtttgc gtgcgtgagt ttgagcaaca aattccttat ggagtaatca cccaaaaaca
     3361 aggttttata gaaaatatag aagaaaaacc tacccaaaaa ttcctagtaa gtgcggggat
     3421 ttatgtactt gaaaatgaaa ttttaaattt aattgctaaa aatgaatact tagacatgcc
     3481 agaactcatc aaacttgtat tgcaaaaagg caaagtaaac acctatatca tcaacgatta
     3541 ttggattgac attggaaggc cagatgagtt tttaaaagcc aatgaggatt ttaaatgaaa
     3601 gtcttaatca taggctttgg aagcatagga aaaaagcatt ttttagcctt aaaaaattta
     3661 aatcatgaag taagtttgct ttctttaagt gctaaaaaag aagaatttaa aaacactcca
     3721 atttatcgct ctttgaaaga atgtgattta aacgaatttg atctttttat catcgcaaat
     3781 atcaccacag agcattttaa caccttaaaa gctttaaatg agcttgtaaa agataaaatc
     3841 atactcgtag aaaaaccttt atttgaaaaa agccaaaatt tcacaagttt aaaaaatcac
     3901 atttatgtag catatttact gcgttttcat cctgtgattg tcgctttaaa aaggctttta
     3961 aaaggtgaaa aaatttattt tgctagtttg atttgtaatt cttatttgcc ccattggaga
     4021 gctttagact acaggcaaaa ttacagcgct aaaaaagagc taggtggtgg ggttttactc
     4081 gatctttctc atgaaatcga tctagccttt tttctttttg gaaacttaga gcttatatac
     4141 tcccaaaatg ctaaaatttc agagcttgac ataacaagcg atgattttgc ctttttggtt
     4201 ttaaaaaatt cacaaaaagc taaaattcat atagaactag actatttttc taaatttaac
     4261 aaaagagaaa ttatcatcca tactttagaa aaaagcttta aagccgattt gataaacaat
     4321 aaaatcgaaa tttatcacaa aaatcaaagt caaaaaatct taaattttga aaatgatacg
     4381 ataaaaaccc ttcaaaattt acatcatgca gtctttgaaa aagacaaaga actttgcgat
     4441 cttaagcagg ctttaaaagt gcttgaaatt tgtgatgaag taaggaaaaa aaatggctga
     4501 aattttatgt accatttgtg ctaggggtgg tagcaaaggc gttaaaaaca aaaatattaa
     4561 aaagattaac gaacttgaaa tgatagctta tagcatcata caagctcaaa attcaaagct
     4621 ttttaaacac atagtcataa gtactgatag tgatgaaatc gcaagtgtag cccaaaaata
     4681 tggtgctgaa gtttttttca aaagagaagc tcatcttgcc aatgatcggg ctgcaaaact
     4741 tcctgtcatg cgtgatgcct tgctaagaag tgaagagcat tttaaaacgt gttttgaaac
     4801 tctcatagac ttagatgctt cagccccgct tcgctcaagc cttgatataa aaaaagctta
     4861 tgaaagtttt gttgaaaatg ataattccaa tctcatcacc gcagttcctg ctagacgcaa
     4921 tccttatttt aacctcgtag aaatacaaaa taacaaggta gtaaaatcca aagaaggaaa
     4981 ttttaccact cgccaaagtg ccccaaaatg ctatgatatg aacgctagta tttatatctt
     5041 taaaagggat tatcttttag aaaatgatag tgtttttggc aaaaacacag ggctttttgt
     5101 aatggatgaa agcacagctt ttgatattga tagcgagctt gattttaaaa tcgtagagtt
     5161 tttaatctct ttaaaaaatt tatcgccaaa ggatttttaa tgcttgaaaa taaaatcatc
     5221 tttgtagcag gagcttgtgg gcgtataggt aaagcgcttt gtcaaaaaat acttcttagc
     5281 aaaggtatcc ctatactcgc agatatcaac aaagaacgct taaataaatt gcaagaaaat
     5341 ttagaaacaa attttaaaac aaaactttta agcttagaac ttgatatcac taaacaagaa
     5401 agcttacaaa ccgcccttca aaaaagtcaa gaaagatacg acaaaatcga tgcttttgtt
     5461 aactcaagct atccttttgg caaagattgg ggtaaaacgc cttattatga actcaaatac
     5521 gaacaaattt gtgaaagttt aaatttacat ttagcaggct ttatgctagc cgctcaagaa
     5581 tttgtgaaat tttttaaaca acaaggctat ggtaatatca tcaatcttag ctccatcatg
     5641 ggagtttatg cgccaaaatt tgaaaactat gaaggcactt ccatgcaaag ctctttagaa
     5701 tacagcgtga taaaagcagg gattaatcac atgagctctt ggctagctaa agagcttttt
     5761 aatcaaaaca tacgcgttaa tactctagca agcgggggaa ttttagacaa tcaaaatgaa
     5821 ctttttttaa aagcttatag aaaatgttgt gcgagtaaag gcatgttaga tgctgatgat
     5881 gtgtgcggaa ccttggtatt tttgcttagc gatgagagta gatttatcac agggcaaact
     5941 ttagtggtag atgatggatg gggcttat
//
LOCUS       DAQUWA010000090         5801 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.090, whole genome shotgun sequence.
ACCESSION   DAQUWA010000090 DAQUWA010000000
VERSION     DAQUWA010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5801
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.090"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..2967
                     /locus_tag="R8X70_001696"
     CDS             <1..2967
                     /locus_tag="R8X70_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEF2929450.1"
                     /translation="MRKAPNKKTGYIILPLALSENELSNLDEAIKNTNFLNIWNILKA
                     LRSHDDTLVDEAVFKEKIKIAVADYVGDDNSSNNTDKSYEPSLFDSFTLSELANTLYN
                     AIPTKLGDKGYWQSFSAKTAKIVEKLNIRLNAIFKEHPEILEEFLTSLKENIHPNIKE
                     DEAIDMICSHIITKPIFDILFDKNMDDNPIGKALDEVNQKLNTFGLEMEETKSLKALY
                     KSVEESVKLAKSQKSKQELIKNLYDTFFRSAFKKQAEKLGIVYTPMQVVDFILHSVNE
                     LLKRHFNTDFNDENVKIFDPFTGTGSFITRLLSKENNLISDENFKNKYENGIFAQDII
                     LLAYYIALINITQTGNERINALDKFKHIALADSLDYLDKKIQDNGLFALEFKDLEENK
                     KIKDLIANEKIKVIIGNPPYSAGASSANDNNANISHPNLEKRVKDTYGKEASAKFGNS
                     TRDTLIQALRMASDKIEDNGIIGFVVNGGFIDATSADGFRKCVAKEFSDIYILNLRGN
                     QRTSGETSRKEGGKIFDSGSRASVAIVFFIKDTSVKTNKIHYYDIGDYLDRQTKLDKL
                     ENFKSVLNVPFINIIPNEKGDWINQRGEDFDNLMPLKSDKNEYGIFVINSTGVVTGRD
                     SWVYNFSKEKLANSMQKCIATYNEDLAKFDHQAFLEKNKNVKNSELYKELSDKDISID
                     NTKIAWTRALKKDFINNEKIKEFNQENIREISHRPFTKEYLYWEKTWNEEQSQLTKFF
                     PKNTDENLLILTSLMVTKEFSSFIVNSIADYQTLANTQIFSLYFYQEDGSKEYAISDF
                     ALDEFKKQLQDETINKEDIFYYIYAIFHHKSYLEKYKFELSKEAPRIPISKDFKNLSV
                     LGKKLATLHLNYENNEMFKEVEFKDGVLADISNDEFYKVTKMKKLGNDIFYNQNITIK
                     NIPSKAFEYKINGKSAIDWIIDRYQISIDKKSLIENNPNDYQGGKYIYELLLKIIDLS
                     IKSVDLINEISKMECE"
     gene            2967..4148
                     /locus_tag="R8X70_001697"
     CDS             2967..4148
                     /locus_tag="R8X70_001697"
                     /inference="COORDINATES: protein motif:HMM:NF019313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929451.1"
                     /translation="MGIDKETLKNKVVNLLRQYSLSNESAIAIAIDGEWGVGKSYMYH
                     KIIEEEIKEVLKITPIYTSVFGKKDENEIIKDLISQFLTIENKNVDGIRNLIQGTFKL
                     FGKNIDMDLLFKFFRKEHMGNTIICIDDFERLSDKIPVQDILGLISELKENKGCHVIL
                     LYNSSKINTNSQEQFNNYIEKIVDVTYNYTPYPFDQLELLKGLLKYPLYTENFPQEEV
                     EKYLSNIKIKNKIDELKLINLREIKKIIYCFNEYFEGLDNEYLKDEYTRVLFVNIIFY
                     CMVNAKLVIKLEDELSTISQKDTDSISKIKNELRLCGMKEDPKNGILNFKPIDGNFIR
                     SFVNVIKKYQKNNFFDFRFSNRYEDKSFVKSEEELISKLFELAQEYKNNKNKISGEDN
                     E"
     gene            4141..>5801
                     /locus_tag="R8X70_001698"
     CDS             4141..>5801
                     /locus_tag="R8X70_001698"
                     /inference="COORDINATES: protein motif:HMM:NF015210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HEF2929452.1"
                     /translation="MSDIKSINDLFGLNFVIPSYQRGYRWDKTQVEDLLEDIWNFCEK
                     EDDKKDSFYCLQPIIVKKYEQDEKKYKLVDGQQRLTTIHMILSHFKVYMDDSRYESFK
                     IEYEIRKDSKDFLENIQEKHKTNEKESNIDFYYMSEAYEYIEEWFSKNNNRRQEFFRI
                     LTSQNNIAKNVRIIWHEIEDNEDEREVFSRINSGKIPLTNAELIKALFLNSNNFKKEE
                     VDLRQIEISKEWDEMEYALQNNEFWRFLTSDEDYPARIELLFKTYYNNAYNNPTDKDP
                     CTIYRFFANELKSDNKLKILDEIWLEVKKIFLTFKYWYENHKLYHLIGYLNVLENKES
                     EKSLVSLYKESSKKSKEDFMLFIEEQISKHIKVKNINEIKEMSYEDDKNEIKKILLLF
                     NIATYLESDIRFSFDKYISEKWSLEHINPQSGFTIKNEDERKQWVKDIINILKLLNNS
                     NEQTNLLLNKIKKVINNPNEKIGDKKFADITNNIFEYFGSEDKHSIANLTLLSLDTNS
                     KLSNHIFAIKRNRLKDDEKTGKFIPLCTKNVFMKYYSENFDDAKN"
BASE COUNT         2510 a          605 c          886 g         1800 t
ORIGIN      
        1 atgagaaaag ctccaaataa aaaaacaggc tatatcatac tgcctttagc attaagcgaa
       61 aacgagcttt caaatttaga tgaagctata aaaaatacca attttttaaa tatatggaat
      121 atattaaaag ctctaagaag ccacgatgat actttggtgg atgaagctgt atttaaggaa
      181 aagattaaaa tagcagtagc tgattatgta ggagatgata attcatcaaa taatacagat
      241 aaaagctatg agccaagctt gtttgatagc tttactctga gcgaacttgc aaatactcta
      301 tataatgcca taccaactaa acttggcgat aaaggttatt ggcaaagctt tagtgcaaaa
      361 acagccaaaa tagtagaaaa attaaacatt agattaaatg ctatttttaa agaacaccct
      421 gaaattttag aagaattttt aacctcctta aaagaaaaca ttcacccaaa tatcaaagaa
      481 gatgaagcca tagatatgat atgctctcat attataacta aacctatatt tgatatttta
      541 tttgataaaa atatggatga taatcctata ggaaaagctc ttgatgaagt aaatcaaaag
      601 ctaaatactt ttggcttaga gatggaagaa actaaatctt taaaagccct ttataaaagc
      661 gtagaagaaa gtgtaaaatt agcaaaaagt caaaaaagca aacaagaact tattaaaaat
      721 ttatacgata ccttctttag atcagctttt aaaaaacaag ctgaaaaatt aggtatagtt
      781 tatactccta tgcaagtggt tgattttata cttcattctg tcaatgagct tttaaaaaga
      841 catttcaata cagattttaa cgatgaaaat gtaaaaatct ttgatccatt cacaggcaca
      901 ggaagtttta ttacaagatt attaagcaaa gaaaataatt taattagcga tgaaaatttc
      961 aaaaacaaat acgagaatgg aatttttgct caagatatta tcttacttgc ttattatata
     1021 gcgcttatta atatcactca aacgggtaat gaaaggataa atgccttaga caaattcaaa
     1081 cacatagccc tagctgatag tcttgattat ttagataaaa aaatacaaga taatggttta
     1141 tttgctttag aatttaaaga tttagaagaa aataaaaaga ttaaagactt aatagccaat
     1201 gaaaaaataa aagttatcat aggcaatcct ccttattcag ctggagcaag tagtgcaaat
     1261 gataataatg caaatatttc tcacccaaat ttagaaaaac gcgtcaaaga tacttatggc
     1321 aaagaagcaa gtgctaaatt tggtaattca acaagagata cactaatcca agctttgcgt
     1381 atggcaagtg ataaaataga agataatggc attataggtt ttgtggtaaa tggaggcttt
     1441 atagatgcaa caagtgctga tggctttaga aaatgcgtag ctaaagaatt tagcgatatt
     1501 tatatcttaa atttaagagg aaatcaaaga acttcaggtg aaacttcaag aaaagaaggt
     1561 ggaaaaatat ttgatagtgg ttcaagagca agtgtggcta tagtattttt tataaaagat
     1621 acgagcgtta aaacaaataa aattcattat tatgatatag gagattatct agatagacaa
     1681 actaagcttg ataaattaga aaattttaaa agtgtattaa atgtgccttt tataaatata
     1741 attccaaacg aaaaaggcga ttggatcaat caaagaggag aggactttga taatttaatg
     1801 cctttaaaaa gcgataaaaa tgaatatgga atttttgtta taaattccac aggtgtagta
     1861 actgggcgcg atagctgggt ttataatttt tctaaagaaa agcttgcaaa ttctatgcaa
     1921 aaatgcatag ctacttataa tgaagactta gctaaatttg atcatcaagc ctttttagaa
     1981 aaaaataaaa atgttaaaaa ttctgagctt tataaagagt taagcgataa agacataagc
     2041 atagataata ctaaaatagc ttggactaga gctttaaaaa aagattttat aaataatgaa
     2101 aaaattaaag aatttaatca agaaaatata agagaaattt ctcatcgtcc ctttactaaa
     2161 gaatatcttt actgggaaaa aacttggaat gaagaacaat ctcaattaac aaaatttttc
     2221 cctaaaaata cagatgagaa tttgttgata ctaacaagct taatggtgac taaagaattt
     2281 tcatctttta tagtaaattc tatagccgac tatcaaactt tggccaacac tcaaattttt
     2341 tcgctttatt tttatcaaga agatggaagc aaagaatacg ctataagtga ttttgcttta
     2401 gatgaattta aaaaacaatt acaagatgaa actataaaca aagaagatat tttttattat
     2461 atctatgcga tatttcatca taaaagttat ttggaaaaat acaaatttga actttcaaaa
     2521 gaagccccaa gaatacctat aagtaaagat tttaaaaact taagcgtttt gggtaaaaaa
     2581 ctagccactt tacacctaaa ttatgaaaac aatgaaatgt ttaaagaagt agaatttaaa
     2641 gatggagttt tagctgatat tagcaatgat gagttttata aagttactaa gatgaaaaaa
     2701 ctaggaaatg atatttttta taatcaaaat atcactataa aaaatatacc tagcaaagct
     2761 tttgaatata aaatcaatgg caaaagtgcg attgattgga ttatcgatag ataccaaata
     2821 agcatagata aaaaaagctt gatagaaaac aatccaaatg attatcaagg cggtaaatac
     2881 atttatgaac ttcttttaaa aatcattgat ttatctataa aaagcgttga tttgataaat
     2941 gagattagta aaatggagtg tgagtgatgg gtatagataa ggaaacatta aaaaataaag
     3001 ttgttaatct attaagacaa tattctctct caaacgaaag tgcaatagca atagcaatag
     3061 atggggaatg gggtgtaggt aaatcctata tgtatcataa aataatagaa gaagaaataa
     3121 aagaagtact gaagataact cccatatata cttcagtttt tggaaaaaaa gatgaaaatg
     3181 agattattaa agatttaata tctcaatttt taacaataga aaataaaaat gtagatggta
     3241 taagaaatct tatacaggga acatttaaac tttttggtaa aaacatagat atggatttgt
     3301 tatttaaatt ttttagaaaa gaacatatgg gcaatactat tatatgtatt gatgattttg
     3361 aaagattatc agataaaatt ccggtgcaag atattttagg attgatttct gagcttaaag
     3421 aaaataaagg ttgtcatgtt attctacttt ataatagttc aaaaataaac acaaattctc
     3481 aagaacaatt taataattat atagaaaaga tagtggatgt aacttataat tatactccat
     3541 atccttttga tcaattagaa ttattaaaag gtttattaaa atatccactt tataccgaaa
     3601 atttcccaca agaagaagtg gaaaaatact tatcgaatat aaaaataaaa aataaaatag
     3661 atgaattaaa attaataaat ttacgcgaga taaaaaaaat tatttattgc tttaatgaat
     3721 attttgaagg tttggataat gaatatttaa aagatgaata tacgcgagtc ttgtttgtta
     3781 atatcatatt ttactgtatg gtaaatgcta aattggtaat taaattagaa gatgaattgt
     3841 ctacaatatc tcaaaaagat actgattcaa tttcgaagat taaaaatgaa ttacgtttat
     3901 gtggtatgaa agaagaccca aaaaatggaa tattaaattt taaacctatt gatggaaatt
     3961 ttattagatc gtttgtaaat gttattaaaa aatatcaaaa aaataatttt tttgatttcc
     4021 gatttagtaa tcggtatgag gataaatcct ttgttaaaag tgaagaggaa ttaatttcaa
     4081 aactctttga gttagctcaa gaatataaaa acaataaaaa taaaatatct ggagaagata
     4141 atgagtgata ttaaatcaat aaatgattta tttgggttaa attttgtaat tccatcttat
     4201 caaagaggtt acagatggga taaaacacaa gttgaagatt tattagaaga tatatggaat
     4261 ttttgtgaaa aagaggatga taagaaagac agtttttatt gtttacagcc gattattgta
     4321 aaaaaatacg aacaagatga aaaaaaatat aaattagttg atggacaaca aagacttact
     4381 actatacata tgattctttc tcattttaaa gtatatatgg atgatagtag atatgaatca
     4441 tttaaaatag aatatgaaat tagaaaagat agtaaagatt ttttagaaaa tatacaagaa
     4501 aaacacaaaa caaatgaaaa agaatcaaat attgattttt attatatgag cgaggcttat
     4561 gaatatattg aagaatggtt tagtaaaaat aacaacagaa ggcaagaatt ttttagaatt
     4621 ttaacatcgc aaaataatat agcaaaaaat gtgagaatta tatggcatga aatagaagat
     4681 aatgaagatg aaagggaagt attctcaaga ataaatagcg gaaagattcc attaactaat
     4741 gccgaattaa tcaaagcctt atttttaaat agcaataact ttaaaaaaga agaagttgat
     4801 ttaagacaaa ttgaaatttc taaagaatgg gatgaaatgg aatatgcctt acaaaacaac
     4861 gaattttgga gatttttaac tagcgatgaa gattatccag caagaataga acttttgttt
     4921 aaaacttact acaataatgc atataataat ccaacagata aagatccttg tacaatctat
     4981 agattttttg ctaatgaact taaaagcgat aataaactta aaattttaga tgaaatttgg
     5041 ctagaagtta aaaaaatatt tttaacattt aaatattggt atgaaaatca taagttatat
     5101 catttaatag gctatttaaa tgttttagaa aacaaagaaa gcgaaaaatc actagttagt
     5161 ctttataaag aatcttcaaa aaagagcaaa gaggatttta tgctatttat agaggagcaa
     5221 attagtaaac atataaaagt aaaaaatata aacgaaataa aggaaatgag ctatgaagat
     5281 gataaaaatg agataaagaa gatattattg ctatttaaca tagctacata cttagagagt
     5341 gatataagat tttcatttga taaatatata tcagaaaaat ggagtttaga acacataaat
     5401 cctcaaagcg gatttactat aaaaaacgaa gatgaaagaa aacaatgggt aaaagatatt
     5461 attaatattt taaaattact caataattca aatgaacaaa caaatttatt attaaataaa
     5521 attaaaaaag taattaataa tccaaatgaa aaaattggtg ataaaaaatt tgctgatata
     5581 actaataata tttttgaata ttttggttcc gaagataagc atagcatagc taatttgacc
     5641 ttgctttcgc ttgatacaaa tagcaagctt agcaatcata tatttgctat taaaaggaat
     5701 agattaaaag atgatgaaaa aactggaaaa tttatccctt tatgtactaa aaatgtgttt
     5761 atgaaatatt atagtgaaaa ttttgacgat gcaaaaaata t
//
LOCUS       DAQUWA010000091         5738 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.091, whole genome shotgun sequence.
ACCESSION   DAQUWA010000091 DAQUWA010000000
VERSION     DAQUWA010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5738)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5738)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5738
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.091"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..169)
                     /locus_tag="R8X70_001699"
     CDS             complement(<1..169)
                     /locus_tag="R8X70_001699"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929453.1"
                     /translation="MIDKNILHTRTIMVNISDFNPTAEFNEELKKAKDNKDYLKIFIC
                     NGLKNSKSNFYL"
     gene            complement(275..463)
                     /locus_tag="R8X70_001700"
     CDS             complement(275..463)
                     /locus_tag="R8X70_001700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929454.1"
                     /translation="MKINLILENPSEKLIKAVKAMTKIAKSKASVLNDYELKAYKEYL
                     ESGKKATLASNLYKELGL"
     gene            complement(468..836)
                     /locus_tag="R8X70_001701"
     CDS             complement(468..836)
                     /locus_tag="R8X70_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEF2929455.1"
                     /translation="MKKDINYYLNLPYKINLVKLDDGDYLAQFDDKELNKLVLMAGDG
                     KTPNEATEDLKNAFACYLEEALAKNEFIPEPMQKDKSKNLAITLKNSLVDEIDFYSKK
                     MGLSRSAFLAVSAKAYIKTL"
     gene            complement(1085..1713)
                     /locus_tag="R8X70_001702"
                     /pseudo
     CDS             complement(1085..1713)
                     /locus_tag="R8X70_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012662284.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1716..2855)
                     /locus_tag="R8X70_001703"
     CDS             complement(1716..2855)
                     /locus_tag="R8X70_001703"
                     /inference="COORDINATES: protein motif:HMM:NF012798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEF2929456.1"
                     /translation="MAIDRKDYNVPIGKGTHLKRHKDKINSFLFRMQNGGKEKQHAFT
                     IPLRPAWNENEYIRIALARAKEYENEFKKLFSVGYALNSSILLKNLFEIFIKTNYNIK
                     DLNEQHKGHIRNLISIFNNHILEPLGNIHLDELTLYKVQEFYNGMKNKGLEPKTYNRA
                     IKEVLSPMIRYAVKNKWINENVTLGLKLDRVQNKKLVTNPKGKYEAILNAILELYKDN
                     LLYKALFLLIHSGRRRDEVLSLLWQNVDLERKTIFLPKTKNGEAQEHALDDECYNALK
                     ALKDEVKQDKGLVFVSSVSGKKISNLARQEAKIRELSGVKEWTPHFSRHIKASFLMQN
                     GVNPAVISGALGHRDLSTINIYATNDTLKASQRANEALKKLQEKD"
     gene            complement(3152..3328)
                     /locus_tag="R8X70_001704"
     tRNA            complement(3152..3328)
                     /locus_tag="R8X70_001704"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3200..3202),aa:Leu,seq:tag)
     gene            3436..4566
                     /locus_tag="R8X70_001705"
     CDS             3436..4566
                     /locus_tag="R8X70_001705"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012798.1,HMM:NF026010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEF2929457.1"
                     /translation="MKNLVKIKEYKGIYFIDKDKKLEDIKEISLVELQRRLTIPYELA
                     IRYYEGKKSNYEIFPILNNTQTLKKNCELIALQRINGKFAKKFKIKEPKLNEVFEEWI
                     SMRKNTISKKHYEVTIFSYNAHIKDIIGNIKIKQVKLKDMQNIVNKMIDQGKSPRTTK
                     TIKDILSPVFEFAIKNDYIEKNIAREIEIQKFDNKRYFTIDDEDRNALYKAIINYENL
                     MIRAMFIFLLHGRRKSEVLTLKWDNIDFANKIYFLPSSQNKSRKNLQFPLSSLQIEAL
                     KSIGVKNKGYIFIKEDGNPYKDIRWHWDKINQKLKTPIRLHDLRHLIGYIGINMGISL
                     EAIGETLGHSSIGVTKRYANIKNETINSTLNAIFSNFKTEKH"
     gene            complement(4612..4884)
                     /locus_tag="R8X70_001706"
     CDS             complement(4612..4884)
                     /locus_tag="R8X70_001706"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEF2929458.1"
                     /translation="MDNIVICKASDLEDIFKKILKENELIKNKTDENLNVQQASNYLK
                     ISTSKLYKDCNLGKVPFCKIGKKLVFKKDDLDEYLKLNSSKNSLKF"
     gene            complement(4884..>5738)
                     /locus_tag="R8X70_001707"
     CDS             complement(4884..>5738)
                     /locus_tag="R8X70_001707"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929459.1"
                     /translation="KNLIPKESLGLLYGSSASGKTSVCLYFCKEILKKDNEIRVFYIN
                     ADMGISSLKKYGFANLLENFVNRFFLIDLTCYDKKFMLFENICDEIIKIQSKFNVFMI
                     VDSLNCVTKKIGRFIDPNYLFSKEKIIRKRGGTVLFIHHLNKSGVFSDSHQIVDYADF
                     SYKCEYNEEMNSILLKPEKIGRFLLEKIAFKVLNFSNLEKMEFDSVEMSSYEIEFIKT
                     VLEILKMGRFKQNELINLVLRNCKRYVGREKARKLLQEYAKKGKWCMLKNRFDNNSIF
                     YYLKNEEK"
BASE COUNT         1977 a          848 c          675 g         2238 t
ORIGIN      
        1 ctaaataaaa attacttttg ctatttttta agccattaca tataaaaatc tttaaataat
       61 ctttattgtc tttagccttt ttcagttctt cattaaattc agcagtagga ttaaaatcgg
      121 aaatattaac cataatagtt ctagtatgta aaatgttttt atctatcatt tgataaacct
      181 aactcgctat gttttcctat tcttaacgcc gtttgtattg ctttatctaa tttactaaat
      241 tgccttaatg ccttatcgct ataataaaaa aacattacaa acctaattct ttatataaat
      301 tacttgctaa agtcgctttt ttaccacttt ctaaatattc tttataagcc tttaattcat
      361 aatcatttaa aacacttgcc ttgctctttg ctatttttgt cattgcttta acggctttga
      421 taagtttctc gcttggattt tctaaaatca agtttatttt caacccctta aagtgtttta
      481 atatatgctt tagccgatac cgctaaaaat gcacttcttg ataagcccat ttttttagaa
      541 taaaaatcta tttcatctac aagactattt tttaaggtaa tagctagatt tttgcttttg
      601 tctttttgca tgggttctgg gataaactcg tttttagcca aagcttcttc taaataacaa
      661 gcaaaggcat tttttaaatc ttctgttgct tcgtttggtg ttttaccatc tcctgccatt
      721 aagacaagtt tattaagttc tttatcgtca aattgtgcta aataatcgcc atcatcaagt
      781 tttactaaat taatcttata aggcaaattc aaataataat ttatatcttt tttcattttt
      841 catcctttaa aagttttaat atttgcttta cataaaattc ttttataggt ttatgcatat
      901 gttagcaaaa cttgcatttt tgggattatt ttctaattct ttgattaact tttctttgtt
      961 gctcatatat gtattatata tataattatc ttaaaatatt ttaaatgcat tcaaagcctt
     1021 gcaaagtatt ttatatttta ttaagtattt gtattttata attcttttac attcaaaggg
     1081 gggcttaacc cctattaaga taatctaaca aatctttatt tattaaacaa atcaaatcat
     1141 ttaaaaagtt ttctatctta tcaggcatta aacctatatt agtccctttt tcttttgtgc
     1201 ttatgcgtgg atataattta ttatcatttt ctctaatttt taaaagattt tcaaaatgac
     1261 aggctctatt ccttaaagta tgtagcaagt ttaaaactat attaacttta tctatattat
     1321 caaagccttg ttttgtattt tcgtaaataa aaaagtttct attactactg ctatacttcc
     1381 taaaatcaaa agcccttaaa tctaaaatct tattttgcac cttataggat atgattaact
     1441 tagctactac acctaagcta aggcgtgata agatttgata tctttatctt taaactcatt
     1501 tattttagcc aataaaaaag gattatcgct agtttttatc cattctttac aattactatt
     1561 taattcataa tctagggcat ttcttagata aatttcaagt attgctattt taggcattat
     1621 cttagatatt aatttcaagt tctcaaaatg ttcgtttata tctttataat gctctaatct
     1681 ttgctttgaa aagataaatt ctaaacctaa catttttaat ctttttcttg tagctttttt
     1741 aaagcttcat tagctctttg acttgcttta agtgtatcat tagtcgcata aatatttata
     1801 gtgcttaaat ccctatgccc taaagctcca ctaataactg cgggattaac tccattttgc
     1861 attaaaaaac tagcctttat gtgccttgaa aaatggggtg tccattcttt tactccgcta
     1921 agttctctta ttttggcttc ttgtcttgcc aaatttgata tttttttacc gctaacacta
     1981 gaaacaaaaa ctaatccttt gtcttgttta acctcatctt ttaaagcctt tagtgcatta
     2041 tagcattcat catctaaggc gtgttcttgt gcttcaccat tttttgtctt tggtaaaaat
     2101 atagtttttc tttctaaatc tacattttgc caaagcaaac ttaaaacctc atccctacgc
     2161 ctaccactat gtataagcaa gaataaagct ttataaagta aattatcttt gtatagctct
     2221 aaaatagcat ttaaaatagc ttcatattta cctttaggat tagtaacaag ctttttattt
     2281 tgcactctat caagctttaa acctaatgta acattttcat taatccattt attttttact
     2341 gcatatctaa tcatagggct tagcacttct ttaatggctc gattatatgt ttttggctct
     2401 agtcctttgt ttttcattcc attataaaat tcttgtacct tgtaaagcgt aagctcatct
     2461 aagtgtatat ttcctaatgg ctctaagata tgattattaa aaatgcttat tagatttctt
     2521 atgtgtcctt tgtgttgttc gtttaaatct tttatgttgt aattggtttt tataaatatc
     2581 tcaaaaagat tttttaacaa aatgctagaa tttaaagcat atccaacgct aaaaagcttt
     2641 ttaaactcgt tttcatattc tttagctctt gcaagtgcta ttcttatata ttcgttttca
     2701 ttccacgcag ggcgtaaagg aatagtaaaa gcgtgttgct tttctttacc cccattttgc
     2761 attctaaata aaaaggagtt aattttgtct ttgtgtcttt ttaaatgtgt tccttttcct
     2821 atgggtacat tataatcctt cctatcaatc gccattttta accttattat ttttgctata
     2881 ttatagcgta tttcaaagcc ttataaactt aataaaatta tcttaggtta cctttatttt
     2941 aaggttagga cttattttta ccttttttac cgccaaactt aaatggatga aaaggactat
     3001 tttatagcta tcctttcatc cggttactat taaaagttac ctgctaaaag gttgcctttt
     3061 tgaaataatt cgaaatgata caatgggact tcaaaggctt cagcgtaatt taagcaaaat
     3121 ctctaaaagt atggtaaaat ggggtttaga gtggtgcgga tgaaaggact tgaaccttca
     3181 cgcattgctg caccagatcc taagcctaat gcgttttgtt atcatttttt atcaaagtat
     3241 tgaaaaatag gcgttttatt gtttaagttt atcttaaaaa tagcattatt ttataccatt
     3301 ttgagaaaaa aaccgctacc aaaaccgcta ccactaaaat tcatttgaga tactattttt
     3361 agtatatttt taattttata ttatgtaaaa aataataaaa ttttctgcgt aaattaaaag
     3421 caaaaaagga atatcttgaa aaatctagta aaaataaaag aatacaaggg tatatatttt
     3481 atagacaaag ataagaaatt ggaggatata aaagaaatta gcttagtaga attacaaaga
     3541 agattaacta taccatacga attggctata agatattatg aaggaaaaaa atcaaattat
     3601 gagatatttc ctattttaaa taacacccag acccttaaaa agaattgtga gttaattgcc
     3661 ttacaaagaa ttaatggaaa atttgcaaag aaatttaaaa ttaaagaacc taaactaaat
     3721 gaagtgtttg aagaatggat tagtatgcga aaaaatacta tttctaaaaa acattatgag
     3781 gtaaccatat tttcatataa tgcacatata aaagatatta taggaaacat caaaataaaa
     3841 caagtcaaat taaaagatat gcaaaatatt gtcaataaaa tgattgatca aggtaaatct
     3901 ccaagaacaa caaaaacgat aaaagatata ctttctccag tatttgaatt tgctattaaa
     3961 aatgattata tagaaaaaaa tatagcaaga gaaatagaga tacaaaaatt tgataacaaa
     4021 agatatttta ctattgatga tgaggataga aatgctcttt ataaagctat tataaattat
     4081 gaaaatttaa tgataagagc tatgtttata tttcttttac atggaagaag aaaaagtgaa
     4141 gttcttacat taaaatggga caatattgac tttgctaata aaatttattt tttaccttca
     4201 agccaaaata aatcaaggaa aaacttacaa tttccgttaa gttctttaca aatagaagct
     4261 ttaaaaagca ttggagtaaa aaataaagga tatattttta ttaaagaaga tggaaacccc
     4321 tataaagata taagatggca ttgggataaa ataaatcaaa aattaaaaac tcctattaga
     4381 ttgcatgact taagacattt aataggatat ataggtatta atatgggtat atctttagaa
     4441 gctattggag aaacattagg acattcaagc ataggagtta caaaaagata tgcaaatatt
     4501 aaaaatgaaa ctattaatag tactctaaat gctattttta gtaattttaa aactgaaaaa
     4561 cactaattta caatggtttt ttaggttttt cggtttttta gttaagtgtg attaaaattt
     4621 taaactattt ttagagctat taagttttaa atattcatca agatcatctt ttttaaaaac
     4681 aagttttttg ccaattttac aaaaaggaac ttttcctaaa ttacaatcct tgtaaagttt
     4741 tgaagtgctt atttttaaat agtttgaagc ctgttgtaca tttaaatttt catcagtttt
     4801 attcttgatt aattcatttt cttttaaaat ctttttaaag atatcttcaa gatcactagc
     4861 tttgcaaatt actatattat ccattatttt tcctcatttt ttaagtaata aaaaatcgaa
     4921 ttgttatcaa aacgattttt tagcatgcac cattttcctt tttttgcata ttcttgcaaa
     4981 agttttcttg ccttttcacg accgacatat cttttgcaat ttcttaagac taggttgatt
     5041 aattcatttt gcttaaaacg acccatcttt aaaatctcta aaacagtttt tataaactcg
     5101 atctcataag aactcatctc aacgctatca aattccattt tttctaaatt gctaaaattt
     5161 aaaactttga atgctatttt ttcaagcaaa aatcttccaa ttttttctgg ttttaataaa
     5221 atagaattca tttcttcatt gtactcacac ttatagctaa aatcggcgta gtcgacgatt
     5281 tggtggctat cagaaaaaac tccgctctta tttaaatgat gaataaaaag cacagtccca
     5341 cctctttttc gaattatttt ctcttttgaa aataaataat tgggatctat aaatcttcct
     5401 atttttttgg taacgcaatt tagagaatca acaatcataa atacattgaa cttactttga
     5461 atttttatta tttcatcaca tatattttca aaaagcataa attttttatc ataacacgtt
     5521 aagtcaatta aaaaaaaacg atttacaaaa ttttcaagaa gatttgcaaa accatatttt
     5581 tttaaacttg aaattcccat gtctgcattt atgtaaaaca ctctaatttc attatctttc
     5641 tttaaaattt ccttgcaaaa atacaaacaa acactcgtct ttccgctagc actactaccg
     5701 taaagcaagc ccaaagattc ttttggaatc aaattttt
//
LOCUS       DAQUWA010000092         5710 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.092, whole genome shotgun sequence.
ACCESSION   DAQUWA010000092 DAQUWA010000000
VERSION     DAQUWA010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5710
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.092"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..744
                     /locus_tag="R8X70_001708"
     CDS             <1..744
                     /locus_tag="R8X70_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929460.1"
                     /translation="FKTFKTLDFCDNIEEFINKSRILELLQHYESKILLSTKAHEIFN
                     LISAKAKLPFKMIQEDKIALSKHSIHHLDKNANFIKHYKKYLPWYFKFIFLFALSFII
                     SIVVLSLIDFAQYQNAKTTHIQNEISQNKIYEIQEKQSQELKANIEQLQLEIQTQNLL
                     LEKYSEQLSKITQNFKADKNTILILTKAIAWLNDHSLRISNLMIDKTLITIKFSNEED
                     FNKALQFTSPQFSLISQDKSLHEITLRAL"
     gene            744..1301
                     /locus_tag="R8X70_001709"
     CDS             744..1301
                     /locus_tag="R8X70_001709"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929461.1"
                     /translation="MNQIEQFLENLSSREKILIYLTTILLAILLSFHFYHSYLKSFFN
                     HEFFIQSSDMDKIITTNQDLNQQIKQLEKELVFIQDKIKSYENYLNVFNKNHETYIKN
                     LQNLALENNLWISNIEWLQSEENSYRKISLNIFGDFSPILSFMKQLENSDLHYQIHKF
                     EIDNTTSLNLHLKLTLSFISLAKLK"
     gene            1386..3173
                     /locus_tag="R8X70_001710"
     CDS             1386..3173
                     /locus_tag="R8X70_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEF2929462.1"
                     /translation="MNIRKIRVEKIRQFMIKEKLDAYLILSADPHLNEYLPSFYQSRA
                     FISGFKGSAGSLIITSQDAFLWTDGRYWIQAQKELEGSGILLQKQDANNTFLKWLKEN
                     LNEEQNLGIDFSVLSLSLQKEIQKNCKAELKNIDLISLIWEDRPALPKNKVYEHELEY
                     CSYSRKEKLLLVREKMNKLQAKNHLISSLDDIAWITNLRGNDVCYNPIFLSHLLILEG
                     KALLFIDREKIDFELEKKLNLDGICLKEYNKIQDELKKLQNTNLLIEPSKTTTLLIEI
                     LDKSVEILEEINPSTHLKAIKTDKEIAHIQNAMIEDGVALCKFFTWLEENIKNNTQIS
                     ELDIDTKITEFRSQSPYYISNSFSTIAGFNANAALPHYKAEKESFSYIQKNGLLLIDS
                     GGQYKNGTTDITRVVAIGELNEEQIHDYTLVLKAHIAIASTIFPKDIAMPLLDAITRA
                     PLWQEQLDYTHGTGHGVGYFLNVHEGPQTLSYFSPVLEKTKAKEGMLTSIEPGIYRTG
                     KWGIRLENLVVNAKIENPKNKDFGEFLYFKPLTLCPFEISCIDKTLLDAKEKAWINTY
                     HKEVYEKLSPKLHDNLKALKWLKERTKAV"
     gene            complement(3206..5041)
                     /gene="mrdA"
                     /locus_tag="R8X70_001711"
     CDS             complement(3206..5041)
                     /gene="mrdA"
                     /locus_tag="R8X70_001711"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEF2929463.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FIVPTRGQILDRNGTPLAINDLGFSISIKPYLTLKRANRGVLEKELNQLQGFFPDLNT
                     TKLAEFYKRNDSYYNQDFIKIIDFIPSQEMMKHYSELNLNQNIRIDPAVQRKYPFGKL
                     ASHIIGYVGKADLQDIKENEISKLTNFTGKSGIERYYNDVLQGEKGTKIYKVNALNQE
                     VEQLSYTSALSNDIELTIDIELQSFLTQLFEGNAGAAIIMDISDGSILAAGSFPEYDL
                     NPFVTGISYKEWDELSNNLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKSINPSTQF
                     FCNGSIELGGRFFRCWNRAGHGAVDLKHAIKASCDVYFYDGSLQVGIDQISRTLSRIG
                     FGAKTGVDLPNEFVGILPSREWKMQRYKQAWFQGDTLNTSIGQGNFLATPMQIARYTA
                     QIAKGAEVVPHFLKSVENNNTITEDKAQDSNEIFTLFEKSQLPYIRDAMYAVANEQGG
                     TSYHYLRNLEVKVAAKTGTAQVVGFSQADKNRVDEKQLRYYTRSHAWVTSYAPYSKPR
                     YVVTVLVEHGGRTISSGVATAKIYQKMIELGYFKPENKANSPKKN"
     gene            complement(5041..5535)
                     /locus_tag="R8X70_001712"
     CDS             complement(5041..5535)
                     /locus_tag="R8X70_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929464.1"
                     /translation="MRKTISAYKVKLNGSYVFLGFLCILYQILGSVFLYMPLLYGVFF
                     CYMYFLLEERQKTFNKLDFRWYFSLFFLFFTDITYDFFLFSSWLAFVIFYYTCADWIK
                     TNLKIGKIIPIILVLCVYAFIFILDAIFSYVGDQEFKMPNFGYMISIMFECLFAYMLY
                     RSKF"
     gene            complement(5537..>5710)
                     /locus_tag="R8X70_001713"
     CDS             complement(5537..>5710)
                     /locus_tag="R8X70_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEF2929465.1"
                     /translation="LKPDQRVLKVFTKCDKLNQSEKAKLKNSFKDAILISNLNKMGLD
                     DLEHEVIKQTLGL"
BASE COUNT         2155 a          922 c          774 g         1859 t
ORIGIN      
        1 tttaaaactt ttaaaacact cgatttttgt gataatatag aagaatttat aaacaaaagc
       61 cgtattttag agcttttaca acactatgaa agtaaaatac tgctaagcac aaaagctcat
      121 gaaattttca atcttataag tgcaaaagca aaacttcctt ttaaaatgat tcaagaagat
      181 aaaatcgcac tttcaaaaca tagcattcac catcttgata aaaatgctaa ttttatcaaa
      241 cactataaaa aatatcttcc ttggtatttt aaatttattt tcttatttgc tctaagtttt
      301 ataatcagta ttgtagtttt atcattaatt gactttgcgc aataccaaaa tgccaaaaca
      361 acacatatac aaaatgaaat ttcacaaaat aaaatctatg aaattcaaga aaaacaaagc
      421 caagaactta aggccaatat agaacaactt caattagaaa ttcaaactca aaatctttta
      481 ttagaaaaat actctgaaca attatctaaa attacgcaaa attttaaagc ggataaaaat
      541 acaattttga ttttaacaaa ggctattgca tggctaaatg atcattcttt aagaatttct
      601 aatctcatga tagataaaac ccttatcact ataaaattta gcaacgaaga ggattttaat
      661 aaagcacttc aatttacaag tccccaattt agtcttatct cacaagataa atccttgcac
      721 gaaatcactt taagagcatt ataatgaatc aaattgagca atttttagaa aatctaagtt
      781 ctagggagaa aattttaata tatcttacaa ccatactcct agcaatatta ctctcttttc
      841 atttttacca ttcttactta aaaagctttt ttaatcatga atttttcatt caaagtagtg
      901 atatggataa aataatcacg acaaatcaag atttaaacca acaaataaaa caacttgaaa
      961 aagagcttgt ttttatccaa gataaaataa aaagttatga aaactatctt aatgttttta
     1021 ataaaaacca tgaaacatac attaaaaatt tgcaaaatct agctcttgaa aataatcttt
     1081 ggatctctaa tatagagtgg ttgcaatcag aagaaaattc ttatcgtaaa atttcactca
     1141 atatttttgg tgattttagt ccaatacttt cctttatgaa acaattagaa aattcagact
     1201 tgcactatca aattcacaaa tttgaaattg acaatacaac aagtttaaat cttcatttaa
     1261 aactaacgct ttcttttatt tccctagcaa aactaaaata aatactatag ctttttatct
     1321 ataaaggcta taatgttatt ttgataaaaa gatttataaa ataatgcaaa tttaaaagga
     1381 aaaaaatgaa tattcgtaaa ataagagttg aaaaaatcag acaatttatg ataaaagaaa
     1441 aacttgacgc ttatttgata ctaagtgctg atccgcattt aaatgagtat ttgcctagct
     1501 tttatcaaag cagagctttt ataagtggct ttaagggctc tgctggaagc ttaatcatca
     1561 cttctcaaga tgctttttta tggacagatg gaaggtattg gattcaagca caaaaggaat
     1621 tagaaggtag tggcatactt ttacaaaaac aagatgcaaa taataccttt ttaaaatggc
     1681 taaaagaaaa tttaaatgag gagcaaaatt taggtataga tttttcagtt ttatccttat
     1741 ctttacaaaa agaaatacaa aaaaactgca aagccgagct aaaaaatatc gatttaatca
     1801 gcctcatttg ggaagatcgt cctgcgttac ctaaaaataa ggtttatgaa catgaattag
     1861 aatattgctc ctattctaga aaagaaaaac tattattagt gcgtgaaaaa atgaacaaac
     1921 tacaagcaaa aaatcatctt atttctagtc ttgatgatat agcatggatt actaatttaa
     1981 gaggaaatga tgtatgctat aatcctatat ttttaagtca tttactaatc ttggaaggaa
     2041 aggctttgct ttttatagat agggaaaaaa ttgactttga acttgaaaaa aaattaaatt
     2101 tagatggaat ttgtcttaag gaatataata aaattcaaga tgagcttaaa aaactccaaa
     2161 atacaaattt actcattgag ccttcaaaaa caactacttt actcattgaa attttagata
     2221 aaagcgttga aattttagaa gagatcaatc ctagcaccca tttaaaagct atcaagacag
     2281 ataaggaaat cgcacatata caaaatgcca tgatagaaga tggagtggct ttatgtaaat
     2341 tttttacttg gcttgaagaa aatatcaaaa ataatacaca aatcagcgag cttgatatcg
     2401 atactaaaat cactgaattt agatctcaaa gtccttatta tattagcaat agtttttcta
     2461 ccatagcagg atttaacgct aatgcagctt taccgcatta taaagccgaa aaagaaagct
     2521 tttcttatat ccaaaaaaat ggattattgc ttatagattc gggtgggcaa tataaaaatg
     2581 gcaccacgga tattactaga gttgtagcta taggtgagtt aaacgaggaa caaattcatg
     2641 attataccct agttttaaaa gcacacatag ccatagcaag tactattttt ccaaaagata
     2701 ttgccatgcc tttgcttgat gctatcacaa gagctccttt gtggcaagaa cagcttgatt
     2761 atacacacgg cactggtcat ggggtgggtt attttttaaa tgttcacgaa ggtccgcaaa
     2821 ctctttctta ttttagccct gtgcttgaaa aaacaaaggc taaagaaggt atgttaactt
     2881 ctatagaacc tggaatttat agaacaggaa aatggggtat taggcttgaa aatttggttg
     2941 ttaatgcaaa aatagaaaat cccaaaaaca aagattttgg tgaattttta tattttaaac
     3001 ccttaacgct ttgccctttt gaaatcagtt gtatcgataa aaccttatta gatgccaaag
     3061 aaaaagcgtg gattaatact tatcataaag aagtttatga aaaactctct cctaagcttc
     3121 atgataattt aaaagcttta aaatggctca aagaaagaac taaagcggtt taacaaaaag
     3181 aaatcttaga aaaataatat tttttctagt tcttttttgg gctattggct ttattttctg
     3241 gtttaaaata tccaagttct atcatttttt gatagatctt tgctgtagca acacctgagc
     3301 ttatcgttct tccaccatgt tctactaaaa cagtaaccac ataacgcggt ttagaataag
     3361 gtgcataaga agttacccaa gcgtgcgatc ttgtataata tctaagttgc ttttcatcaa
     3421 ccctattttt atcagcttga gaaaaaccca ccacctgtgc agttcctgtt ttagcagcaa
     3481 cttttacttc taaattgcgc aaataatgat aagaagtacc tccttgctca ttagcaaccg
     3541 catacatcgc atctcttata taggggagtt gacttttttc aaaaagggtg aaaatttcat
     3601 tactatcttg cgctttatct tctgtgatag tattgttatt ttctacactt tttagaaagt
     3661 gaggtacaac ttcagcacct tttgcaattt gagctgtata tctagcaatc tgcataggtg
     3721 tagccaagaa atttccttgc cctatggaag tatttaaggt atcaccttga aaccaagctt
     3781 gcttatatct ttgcattttc cattctctac ttggcaaaat tcccacaaat tcattaggta
     3841 aatccacacc ggttttagct ccaaagccta tgcgtgataa agtacgactt atttgatcta
     3901 tacccacttg caagcttcca tcgtaaaaat aaacatcaca acttgctttt atcgcatgtt
     3961 ttaaatctac agctccatgc cctgctctat tccaacaacg aaaaaatctc ccgccaagct
     4021 ctatactacc attacaaaaa aattgggttg aggggttgat actttttgaa tttaaaaaag
     4081 acaaaccaac acccatttta acaacagaac ctggaggata atatccattg ataagtttat
     4141 ttgtaaaagg atgatcaaga ttattagaaa gctcgtccca ttctttataa gaaattccgg
     4201 ttacaaaagg atttaaatcg tattcaggaa agcttcctgc tgccaaaata gaaccatcgc
     4261 taatatccat aataatagca gcacccgcat taccctcaaa aagttgcgtt aaaaagcttt
     4321 gaagttctat atctatggta agttctatat cattagaaag tgccgaagta taggagagtt
     4381 gctccacttc ttgatttaag gcattaacct tataaatctt agttcctttt tctccttgca
     4441 aaacatcatt ataataacgc tctatcccac tctttcctgt aaaattggta agctttgaaa
     4501 tttcattttc tttaatatct tgcaaatctg ccttgcctac atagcctatg atatgcgaag
     4561 ctagttttcc aaaaggatat tttctttgca ctgcaggatc tatgcgtatg ttttgattta
     4621 aattgagttc tgaataatgc ttcatcattt cttgcgaagg tataaagtct atgattttaa
     4681 taaaatcttg attataataa gagtcattcc tcttataaaa ttcagcaagc ttagtagtgt
     4741 ttaaatcagg aaaaaatcct tgaagttgat ttaattcttt ttctaataca cctctatttg
     4801 ccctttttag agttaaataa ggcttaatag aaatactaaa acccaaatca ttaatcgcca
     4861 aaggagtgcc attacgatct aaaatttgtc cgcgagttgg gactataaat tcagttttta
     4921 tagcattttg tttggcaagt tcttcataat acacatttga ttttatactt aaataataca
     4981 cacggcttaa taaaaatata aaaaacaata atataaagcc aacaaccaaa cgcattctca
     5041 ttagaactta ctcctatata acatataagc aaacaaacac tcaaacataa tcgatatcat
     5101 atagccaaaa tttggcattt taaactcttg atctcctaca tacgaaaaaa tagcatctaa
     5161 aataaaaata aaagcataaa cacaaaggac aagtatgata ggaataattt ttcctatttt
     5221 taaatttgtt ttaatccaat ctgcgcaagt ataataaaaa ataacaaagg caagccaaga
     5281 agaaaagaga aaaaaatcat aagttatatc tgtaaaaaat aaaaaaaata aagaaaaata
     5341 ccacctaaaa tcaagtttgt taaaggtttt ttgcctttct tctaaaagaa aatacatata
     5401 acaaaaaaat acaccgtaaa gcaaaggcat ataaagaaaa acagagccta aaatttgata
     5461 taagatacac aaaaaaccta aaaaaacata acttccattc agttttacct tataagcact
     5521 gatagttttt ctcattttat aaacctaaag tttgcttaat aacttcatgt tctaaatcat
     5581 caagacccat tttgtttaaa ttggatatta aaatagcgtc tttgaaacta tttttaagtt
     5641 tagctttttc actttgattg agtttatcgc attttgtaaa cacttttaat actctttgat
     5701 caggttttaa
//
LOCUS       DAQUWA010000093         5683 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.093, whole genome shotgun sequence.
ACCESSION   DAQUWA010000093 DAQUWA010000000
VERSION     DAQUWA010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5683)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5683)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5683
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.093"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..1555
                     /locus_tag="R8X70_001714"
     CDS             <1..1555
                     /locus_tag="R8X70_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002802099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HEF2929466.1"
                     /translation="KKRKKFTAMKVDEENFMPIFKNHLDFKNYEKNFLQVKSAIAKGR
                     SYQVNLTQSFHFDSLLDGFSLFNLLSKRQDTEFKAYIKDEGREILSFSPELFFKIHKR
                     KIITQPMKGTSARSKDLNQDKKNKLFLQKDVKNLSENVMIVDLLRNDLSKLIVKNSMK
                     TKLFKIQSYPTLHQMTSIIKGKLKKDIDYFQIFKALFPCGSITGAPKLETIKLIEELE
                     ARKRGIYCGAIGCIHKNKSKFSVAIRTLEKKQDYQYSVGSGLVWDSKLEEEIKELELK
                     TQFLMPKNFYLFETMYYKKGKILFFKEHLQRILNSALKLNFNTQKLIKDFQEVLSYKS
                     NLKEFKNFNIQALNEKLFHKNHSFFYPSIIKSHHKQAIFKLILQKDGNYTILENHIKT
                     SDNNILLLSDKPLNSQSDSLYHKSSLRQIYDQKAFLWKENQCFDIAFFNEKNELCEGS
                     RSNIIIKKDKVLYTPTLQSGLLNGIYRQFLLDLGLIKEKKLFKEDLLNADEIYCINSV
                     RGLQKVSVK"
     gene            1552..2130
                     /locus_tag="R8X70_001715"
     CDS             1552..2130
                     /locus_tag="R8X70_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEF2929467.1"
                     /translation="MKKILLIDNYDSFSYTIVFYLKELGYQCKIIKNDEFKKAKDLAR
                     FDFSHLIISPGPNSPTESKLSLKAIQYFKKDKKILGICLGHQCIGEIFGGKITPMPYP
                     MQGKISRLHLKKNAKKSLLFKGIKNKSKICLYHSLHISKMPKSCEILALNDKNIIMAI
                     KHKKYEIYGVQFHPEAILSQNGKKLLKNFMKI"
     gene            complement(2127..2987)
                     /locus_tag="R8X70_001716"
     CDS             complement(2127..2987)
                     /locus_tag="R8X70_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEF2929468.1"
                     /translation="MGVFLVLLGGIFWAISGVLAEYLFKNNYGVDWVSFYRLFCTGIV
                     LILYSLKKIKIFQFKKDELLSFLIFAFFGLLMTQYGYFKAIFYTDAGTATMIQYCAPL
                     LIMIYVCLKDKKMPKIFESMALIFIILALFLLASGGDISNLNLNLWGIFWAILGAFGV
                     AFYSLGARKIIAKYGIFFVMGWSSLIASFILFGILEFKEGLVHYDFALNLYLAQAGII
                     FIGTIGAFCLYLKGVEYIGALRASMIACIEPVAAAFMSFLFLGTRYSFLDLFAFALII
                     LSVILNAKKS"
     gene            3182..4438
                     /gene="murA"
                     /locus_tag="R8X70_001717"
     CDS             3182..4438
                     /gene="murA"
                     /locus_tag="R8X70_001717"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEF2929469.1"
                     /translation="MTYLEIQGSQKLQGEVIISGAKNAALPLIASSILAKNEVKINNV
                     PNVADIKTLISLLENLGAKTDFKENTAYLDTSTLDKTVAKYDIVRKMRASILTLGPLL
                     ARFNHCEVSLPGGCAIGQRPIDLHLSALEKMGANIEIKQGYVVASGNLKGAQILFDKI
                     TVTGSENIIMAAALAKGKTKLVNVAKEPEVVQLCEVLAKAGLDIKGIGTDELEIYGTD
                     KELLDFKEFSVIPDRIEAGTYLCAGAITNSKITLKKVNAEHLGAVLAKLHQMGFETLV
                     DNDNITLFPAKEIKATEIMTSEYPGFPTDMQAQFMALALMAKGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALVAKGTSRIHRI
                     YHLDRGYEKLEEKFKALGAKITRLEE"
     gene            4435..5601
                     /locus_tag="R8X70_001718"
     CDS             4435..5601
                     /locus_tag="R8X70_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEF2929470.1"
                     /translation="MKNIFQTLAHLQDQIKALNEFELISLEEAKDRVLAKDLYAVKNL
                     PSFDNAALDGYAFNYADVNQALDIKGTILAGDKNTYEIYKNECFKIMTGAKMPKNADT
                     ILMIEDECIEEGKLVIKKPPKQYNAYRYKGEELKKDELLLKKGTRLNARHIALLSSQG
                     LYKIEVVRKIRIGIFSSGDELKEPWQDCDEENIYNANALPLLALFKDCATSYLGIIKD
                     DFNATKKALENANFDLLITSGGASVGEADFMEKALNELGFTPLFKGLKARPARPTKLY
                     QKDKTLVLILPGNPMAAYLSAFIFARKIIALLYGNLENPLQIQAFMGSDLKVKSGRNN
                     LILGNLEKGIFYPFNDNKFGSGMILPLIQSEFLLISEEEKVDFQKDERIMLFKL"
BASE COUNT         2201 a          830 c          885 g         1767 t
ORIGIN      
        1 taaaaaaaga aaaaaattca ctgcgatgaa ggttgatgaa gaaaatttta tgcctatttt
       61 taaaaatcat ttagatttta aaaactatga aaaaaacttt ttgcaagtaa aatccgctat
      121 agcaaaagga cgaagctatc aggtcaatct cacccaaagt tttcattttg atagcttgct
      181 tgatggattt tctttgttta atcttttatc caaaagacaa gatactgaat ttaaagcgta
      241 tattaaagat gaaggacgcg aaattctttc cttttctcct gaattatttt ttaaaatcca
      301 taaaagaaaa ataatcaccc agcctatgaa aggcacaagt gcaagatcta aggatttaaa
      361 tcaagataag aaaaacaaac tttttttgca aaaagatgtt aaaaatttaa gcgaaaatgt
      421 aatgatagtc gatcttttaa gaaacgatct ttcaaaactt atcgttaaaa acagcatgaa
      481 aacaaagctt tttaaaattc aaagttaccc tactttacat caaatgactt ccattataaa
      541 aggcaagctt aaaaaagata ttgattattt tcaaattttc aaagctttat ttccctgcgg
      601 ttcgatcaca ggagctccta aacttgaaac cataaaactt atagaagaac ttgaagcaag
      661 aaaacgcgga atttattgcg gtgctatagg ttgtatccat aaaaataaaa gcaaatttag
      721 tgttgctata cgcactcttg agaaaaaaca agattatcaa tacagcgtcg gaagtggttt
      781 ggtgtgggat tctaagcttg aggaagaaat taaagaattg gagttaaaaa ctcaattttt
      841 aatgcctaaa aatttttatc tttttgaaac tatgtattat aaaaagggta aaattttatt
      901 ttttaaagaa catttgcaaa gaattttaaa ttctgcctta aaattgaatt ttaacacaca
      961 aaaactcatt aaagattttc aagaagtgtt aagctacaaa tccaatttaa aagaatttaa
     1021 aaatttcaat atccaagctt taaatgaaaa actttttcat aaaaatcata gcttttttta
     1081 tccaagcatc attaaaagtc atcacaaaca ggctattttt aaacttatct tgcaaaaaga
     1141 tggcaactat actatcttag aaaatcatat caaaacaagt gataataata tcttgctttt
     1201 aagtgataaa cccttaaatt cgcaaagcga ttctttatat cataaaagtt ctttaagaca
     1261 aatttatgat caaaaagctt ttttatggaa agaaaatcaa tgctttgata tagctttttt
     1321 taatgaaaaa aatgaattat gcgaaggttc aagaagtaat atcatcatta aaaaagataa
     1381 agtcctttat acccctaccc tacaaagtgg acttttaaat ggaatttata ggcaattttt
     1441 gcttgattta ggacttataa aagaaaaaaa actttttaaa gaggatttgt taaatgcaga
     1501 tgagatttat tgtatcaatt cggttagagg attgcaaaaa gtgagtgtaa aatgaaaaaa
     1561 attttactca tagataatta tgattctttc agctatacta tagtttttta tcttaaagaa
     1621 ttgggctatc aatgtaaaat tataaaaaat gatgaattta aaaaagctaa agatttagct
     1681 cgctttgatt tttctcatct tatcatctct ccaggtccaa attctcctac tgaatcaaaa
     1741 ttaagtttaa aagcaattca atactttaaa aaagataaaa aaatactagg aatttgttta
     1801 ggacatcagt gtataggcga gatttttggt ggaaaaatca ctccgatgcc ctaccctatg
     1861 caaggtaaaa tttcaagatt gcatcttaag aaaaatgcta aaaaaagcct gctttttaaa
     1921 ggtattaaaa ataaaagtaa aatttgtttg tatcattctt tacatattag caaaatgcca
     1981 aaaagctgtg aaattttggc tttaaatgat aaaaatatca tcatggcaat caagcataaa
     2041 aaatatgaga tttatggggt gcaatttcac cccgaagcaa ttttaagcca aaatggcaaa
     2101 aaattactta aaaattttat gaaaatttaa ctttttttag catttaaaat cacgcttaag
     2161 ataattaaag caaaggcaaa aagatctaaa aagctgtatc ttgttcctaa aaataaaaag
     2221 ctcataaaag cagctgctac aggctcgata catgctatca tgcttgctct taaagctcct
     2281 atgtattcaa cccctttaag atatagacaa aaagccccta tagttcctat aaatattata
     2341 cctgcttggg ctaaatacaa attaagagca aaatcataat gcactaaacc ttctttaaat
     2401 tcaagtatcc caaaaagtat aaaagaagcg attaaactag accaacccat aacaaagaaa
     2461 attccatatt ttgcaatgat ttttcttgca cctaaagaat aaaaagcaac cccaaaagct
     2521 cctaaaatgg cccaaaaaat tccccataaa tttaggttta aattgcttat atctccacca
     2581 cttgcaagca aaaatagagc tagaattata aaaattaaag ccatactttc aaaaatttta
     2641 ggcatttttt tatcttttaa acatacataa atcatgataa gcaaaggagc acagtattgt
     2701 atcatagtag cagtacccgc atcggtataa aaaatagctt taaaatatcc atattgagtc
     2761 atcaataaac caaagaaagc aaaaatcaaa aaggataaaa gctcatcttt tttaaattga
     2821 aatattttta ttttctttaa gctatataaa ataagcacta tacctgtaca aaacaatcta
     2881 taaaaactta cccaatctac cccataatta tttttaaaca aatactcagc caaaactccg
     2941 cttatagccc aaaaaattcc acccagcaaa accaaaaaaa cacccatgat atcaccttga
     3001 aaaataaaat atttatcatt actttttaaa tttaaaataa tacaataaaa atcatcaaac
     3061 tcggaaaaat ttaagctcca aataaatcac aaatttcaaa acgaaaagcc caagcaataa
     3121 acttttacaa agtttaaaaa ggtataatta agctttgaaa tttaaaataa ggtttatcat
     3181 aatgacttat ttagaaatac aaggctccca aaaacttcaa ggtgaagtta taataagtgg
     3241 tgcaaaaaat gccgctttac ccctaatcgc ttctagcata cttgcaaaaa atgaagttaa
     3301 aataaataat gttcctaatg ttgcagacat taaaacactc atttctttgc ttgaaaattt
     3361 aggcgcaaaa actgacttta aagaaaatac agcatattta gatacatcaa cacttgataa
     3421 aaccgtggcc aaatatgata tcgtgcgtaa aatgcgtgct tctatcctta ctttaggacc
     3481 cttgcttgct cgttttaatc attgtgaagt ttcattgcct ggaggatgtg ctataggaca
     3541 aagacctatc gatttacacc taagtgcttt agaaaaaatg ggtgcaaata tagaaataaa
     3601 acaaggttat gtcgtagcaa gtgggaattt aaaaggagct caaattcttt ttgataaaat
     3661 taccgttaca ggcagcgaaa atatcattat ggcagcagct ttagctaagg gaaaaactaa
     3721 gcttgtaaat gttgccaaag agcctgaagt cgtgcagctt tgtgaagttt tagccaaggc
     3781 tgggcttgat ataaaaggca taggcacaga tgagcttgaa atttatggca cagataaaga
     3841 acttttggat tttaaagaat ttagtgtgat tcctgatagg attgaagcgg gaacttattt
     3901 gtgtgcagga gctattacaa attctaaaat cacacttaaa aaagtaaatg ccgagcattt
     3961 aggagcggtt ttagcaaaac tccatcaaat gggttttgaa actttggtag acaatgataa
     4021 tatcacctta tttcctgcaa aagaaatcaa agctacggag atcatgacta gtgaatatcc
     4081 tggttttcca accgatatgc aagcacaatt tatggcttta gccctaatgg caaagggtac
     4141 aagcatcatc gatgaaagac tttttgaaaa tcgctttatg catgtaagcg agcttttaag
     4201 aatgggtgcg gatattaaat taaatgggca tattgctact atagtgggtg gtaaagaatt
     4261 aaatgctgca gatgttatgg ctacggattt gcgtgcttct tcggctttga ttttagcagc
     4321 acttgtggct aagggcacaa gtagaataca tagaatttat catcttgatc gtggttatga
     4381 aaaattagaa gaaaaattta aagccttagg cgctaaaatc acaaggcttg aagaatgaaa
     4441 aacatttttc aaactttagc gcatttacaa gatcaaatta aggctcttaa tgagtttgaa
     4501 ttaatcagtc ttgaagaagc taaagatagg gttttggcta aagatctcta tgctgtaaaa
     4561 aatttaccta gctttgataa tgctgcgctt gatggctatg cttttaatta tgcggatgta
     4621 aatcaagctt tagatataaa aggtacgatt ttagctggag ataaaaacac ttatgagatc
     4681 tataaaaatg agtgttttaa gatcatgaca ggtgcaaaaa tgcccaaaaa tgccgatact
     4741 attttaatga tagaagatga gtgtatagaa gaaggcaagc ttgtcatcaa aaagccacct
     4801 aaacaataca acgcttatcg ttataagggc gaagaattaa aaaaagatga gcttttgcta
     4861 aaaaaaggca caaggcttaa tgctagacat atcgctctgc tctcctctca agggctttat
     4921 aaaatagaag ttgtaagaaa aattcgtatt ggaatttttt caagtggaga tgagttaaaa
     4981 gaaccttggc aagattgtga tgaggaaaat atctataatg ctaatgcttt gcctttactt
     5041 gctttattta aagattgcgc tacaagttat cttggtatta ttaaagatga ttttaatgca
     5101 actaaaaaag ctttagaaaa tgctaatttt gatcttttaa tcacttcagg tggtgcgagt
     5161 gtaggagaag ctgattttat ggaaaaggct ttaaatgaat taggctttac tccacttttt
     5221 aagggtttaa aagcacgccc tgcaagacca actaagcttt accaaaaaga taaaacttta
     5281 gtattgattt taccaggaaa tcctatggca gcttatcttt ctgcttttat ctttgctaga
     5341 aaaatcatcg ctttacttta cgggaattta gaaaatcctt tacaaattca agcttttatg
     5401 gggagtgatt taaaagtaaa aagtggaaga aataatctta tcttagggaa tttagaaaag
     5461 ggtatttttt atccttttaa tgataataaa tttggttcag ggatgatact gcctctgatt
     5521 caaagcgaat ttttactcat cagtgaagaa gaaaaagtag attttcaaaa agatgaaaga
     5581 atcatgcttt ttaaacttta atatattaag atggttattt taaaaagtgg atttatttta
     5641 aaagatattt tagataaatg aaaagaaaaa taaatttgtg aag
//
LOCUS       DAQUWA010000094         5521 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.094, whole genome shotgun sequence.
ACCESSION   DAQUWA010000094 DAQUWA010000000
VERSION     DAQUWA010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5521
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.094"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            18..2132
                     /locus_tag="R8X70_001719"
     CDS             18..2132
                     /locus_tag="R8X70_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEF2929471.1"
                     /translation="MNLSKRVLKLSLLVFLLSTGINAQELNDKAIQMQKVVVSATGFE
                     QDADNNLRNVIVIDGKDLEKRGFNTLEQALERISGISFVNFGLGRNIDMRGQGSKSDI
                     AVKVMVNGNAINVLDNSHGVTPLESVNLNNIERIEIIPGGGSVLYGSGTRGGVINIIT
                     KKEKSDAFALSLKGSSYDHGNLGGNLGVYGAKKINDYLTFGFDIQGFNRDGYQEGYNE
                     KGYFVNTKAYLNTSDNSDLSLNYNYFESKNTSSGYLTKAQIQSDPTQKGSGDNITQIN
                     RPEIALDYHHYFSDLYEIQLGAFWQNQKIRYLKDEIPMMGTIAYQTGSGFEDTLTGIN
                     LKNKINYKDDSYFIFGYEFANHDAKRTSIVHYNVNTPAFQMSHTMTTLMDMDKQSHSV
                     FALDSHQFNDIFSISGGARYEYSLYDTHRNYTNKMIIFGMEQPSNPELFDADDTSNNF
                     AFEITPNFKYSDTGNIYAKYERGFISPTPAQLVNKDQATQKYYTANLDPEIFDTFELG
                     INDFWWDFYGFNLTLFYTLSKDEISYLGNPHSTGGVFWKYYNIDQTRRLGAELNLHQF
                     LFNDSLILKESLSYLDAQISKGVNDGLRIPYVSKIKATAGVEYAWNKNLSSYIDLSYF
                     SRAKDGGVVDENTGKMSRNSWIKDYFLTDIGVNYNYRNLQILAGIRNLFDKQYYTYQD
                     STNDQYLAGNGRNYYVEFKYAF"
     gene            2107..3093
                     /locus_tag="R8X70_001720"
     CDS             2107..3093
                     /locus_tag="R8X70_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEF2929472.1"
                     /translation="MLNLNMRSKNLVIIGLFLAYIITCIIALCLGDENLSPKELLSYA
                     FGENEILRQIIIDGRLPRIIMAILIGMLLASSGAVTQNVFSNPIADPYIIGIASAATF
                     GSVLAYLLKLPDYYYGILGFICSAIFSLAIFKVSSKASIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGSASWFRIGILILPLIFCLMYFYAHKNELNIILSGDD
                     EARNLGVDAQKLKINLLIVSSLAVSFAVAFTGLIAFVGLIIPHTVRLLLRNYDNALVI
                     PFCTAFGGLFLLICDTLARTLIAPVQIPIGVLTAFFGAPVFLYLALSARRFL"
     gene            3093..3869
                     /locus_tag="R8X70_001721"
     CDS             3093..3869
                     /locus_tag="R8X70_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEF2929473.1"
                     /translation="MLKIQNLSFSYHKKELLKNINLELQNKAFIGILGPNGSGKSTLL
                     KLILKNLNISKGEISLFNTNIKNFALKEFAQLCGFVPQNSGLNTPLKVIDVLLMSKFT
                     NLKHAFCDYSKEDILEVEKFAKTLKLENFLERNILSLSGGEFQRVLLARALLKKPKIL
                     FLDEPTSALDLNHAIELLSLCERLIKQNNIAVVAILHDLNLASMFCDKVLFLKEGEIK
                     YFGSTKELFTKEILKEIYNLNCEIVYKDLKPYILALKEKI"
     gene            3866..4672
                     /locus_tag="R8X70_001722"
     CDS             3866..4672
                     /locus_tag="R8X70_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEF2929474.1"
                     /translation="MKKILIIMSLFLTLLNAKERIVVLDPASIETLFMLNAQDQIVGI
                     ANLQHSNIYPEEKTSKITSVGTFSHPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAQRLDEIKSNIQILAKLTDKEEQGKKLLEEFEQGLQELQKNPLNKSGIYLYSS
                     NPLMAFNDNSLIADILRLIGIKNLSPQSEIARPIISAEYILKQNPDLLILGINADGNI
                     LNANALLKNTKAAQMGQIYHNENTHILLRLSPKIIDRIKEFKTRLENQNF"
     gene            complement(4669..>5521)
                     /locus_tag="R8X70_001723"
     CDS             complement(4669..>5521)
                     /locus_tag="R8X70_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HEF2929475.1"
                     /translation="FKKLYIELSDICGLKCDFCPSKKALRGVMSVENFSKLARQIWDK
                     SEIFTFHLLGDPLLLNNLEEYLQIAKNHQMKLEITTSGFYFSPKNSKLLLKYDNIHQI
                     NISLMAFLSQSKLSLEQYFKPILEFCKEHLEYKKSSFINLRLWNLDTNFKVPSENLPI
                     YEFLSKEFGVRILTHLAKNRLQRHILLHQNKLFKWPSLKDKPLYTQGKCHALKEQIGI
                     LSDGTLVPCCLDTKGDISLGNVFNAEFKSLLESKRIQEIKKAFEENKRIEKLCQSCEF
                     FKTRLSD"
BASE COUNT         1940 a          849 c          904 g         1828 t
ORIGIN      
        1 ttaaaaggag taaaaatttg aatctaagca aaagagtttt aaagctatct ttactagtat
       61 ttttactaag cactggtatc aatgcacaag aattgaatga taaagccatt caaatgcaaa
      121 aagttgttgt aagtgcaaca ggatttgaac aagatgcaga caataacttg cgtaatgtaa
      181 ttgttatcga tggtaaagac ttagaaaaaa gaggatttaa taccttagaa caagccttag
      241 aaagaatttc aggcattagt tttgtaaatt ttggactagg acgcaatatc gatatgcgtg
      301 gacaaggaag caagtccgat atagctgtga aagttatggt aaatggaaat gctattaatg
      361 tgcttgataa ttctcatggc gtaactcctt tagaaagtgt caatttaaac aatatagaac
      421 gcatagaaat cataccaggg ggaggctctg tgctttatgg aagtggcact agagggggtg
      481 tgattaatat cattacaaaa aaagaaaaat ccgatgcttt tgctctaagt cttaaaggca
      541 gtagttacga tcatggaaat ttaggtggaa atttaggcgt ttatggggct aaaaaaatca
      601 atgattatct aacatttggt tttgatatac aaggctttaa ccgcgatggc tatcaagagg
      661 gttataatga aaaaggctat tttgtcaata caaaagccta tctaaatact agcgataata
      721 gtgatttatc cctaaattat aattattttg aaagcaaaaa tacaagcagt ggctatctta
      781 caaaagcaca aattcaaagt gatccgaccc aaaaaggaag tggtgataat atcactcaaa
      841 tcaatagacc tgaaattgct ttagattatc atcattattt tagtgattta tacgaaattc
      901 aactcggagc attttggcaa aatcaaaaaa taagatatct aaaagatgaa attccaatga
      961 tgggcaccat agcttatcaa accggtagcg gttttgaaga tacgcttacg ggtataaatt
     1021 taaaaaataa aatcaattac aaagatgatt cttattttat cttcggctat gagtttgcaa
     1081 atcatgatgc caaaagaaca agcatagttc attataatgt aaacactcca gcatttcaaa
     1141 tgagtcatac catgacaacc ctaatggata tggataagca aagccattct gtttttgctc
     1201 tagactctca tcaatttaat gatattttta gtatttcagg tggggcaaga tacgaataca
     1261 gtctttatga tacccataga aattacacaa acaaaatgat aatatttggt atggagcaac
     1321 caagcaatcc agagcttttt gacgctgatg atacaagcaa taactttgcc tttgaaatca
     1381 ctccaaattt caaatattct gatactggaa atatatatgc taaatacgaa agaggtttca
     1441 tctctccaac tcctgcacaa cttgttaaca aagatcaagc aactcaaaaa tattacactg
     1501 ccaatttaga tcctgaaatt tttgatactt tcgaacttgg gattaatgat ttttggtggg
     1561 atttttatgg ctttaatttg actttatttt acactctaag caaggatgaa atttcttatc
     1621 ttggaaatcc acactccaca ggaggagtat tttggaaata ttataatatc gaccaaacgc
     1681 gtcgtttagg agcggaatta aaccttcatc aatttttatt caatgatagc ttaatcctca
     1741 aagaaagcct aagctatctt gatgctcaaa tttctaaagg tgttaatgac ggacttagaa
     1801 ttccttatgt ttcaaaaatc aaagccacag ccggagtaga atacgcttgg aataaaaatt
     1861 tatcaagcta tatagatcta agctattttt caagagcaaa agatggcggg gttgttgatg
     1921 aaaatacagg aaagatgtct agaaattctt ggattaagga ttatttttta actgatattg
     1981 gtgtaaatta taattataga aatttacaaa ttctagcagg cattcgcaat ctttttgata
     2041 agcaatatta cacttatcaa gacagcacaa atgatcaata tctagccgga aatggtagaa
     2101 attactatgt tgaatttaaa tatgcgttct aaaaatctag tgattatagg gcttttttta
     2161 gcctatataa tcacctgtat catcgcactt tgcttaggag atgaaaattt aagccctaaa
     2221 gaacttctct cctatgcttt tggtgaaaat gaaattttgc gtcaaatcat catcgatggg
     2281 cgtttgcctc gtattataat ggctatttta atcggtatgc ttttagctag cagtggagca
     2341 gtaacgcaaa atgtattttc aaaccccata gcagatcctt atatcatagg tatagcttca
     2401 gcagcaacct ttggatctgt tttagcgtat ttgttaaaac tgcctgatta ttattatgga
     2461 attttaggct ttatttgttc tgctattttt tcattagcga tctttaaagt atcttcaaaa
     2521 gcttccatag ctactttact catcataggc attgctgcct catcttttct aggagctttt
     2581 acctcgtttt ttacctatct tataggggaa gattctttta aaatagttgc ttggcttatg
     2641 ggaaatatag gttcagcttc ttggtttcgt ataggaattt tgattttgcc tttgattttt
     2701 tgtcttatgt atttttacgc gcataaaaat gaattaaata tcattttaag cggggatgat
     2761 gaggcaagaa atttaggagt tgatgcccaa aaattaaaaa tcaatctttt gatagtttct
     2821 tctttggcag tttcttttgc ggtagctttt acaggactca tagcctttgt aggacttata
     2881 atccctcata ccgtaagact cttgcttaga aattatgaca atgctttggt tattcctttt
     2941 tgtaccgctt ttggagggct ttttttactc atttgtgata ctctagcaag gactctaata
     3001 gcccccgtgc aaattcctat aggggtttta accgcattct ttggagctcc tgtattttta
     3061 tatttggctt taagtgctag gagattttta tgatattaaa gatacaaaat ttaagtttta
     3121 gctatcataa aaaagaattg ttaaaaaata tcaatttaga gcttcaaaat aaagctttta
     3181 taggtatttt agggcctaat ggctcgggta aaagcacact tttaaagctt atactaaaaa
     3241 atttaaatat aagtaagggc gaaatatcgc tttttaatac caatataaaa aactttgccc
     3301 ttaaagaatt tgcacaactt tgcggttttg tgcctcaaaa ttcgggttta aacacgccct
     3361 taaaagttat tgatgtgctt ttaatgagca aatttacaaa tttaaaacat gctttttgtg
     3421 attattctaa agaagatatt ttagaagttg aaaaatttgc aaaaacttta aaattggaaa
     3481 actttttaga aagaaatata ctttctttaa gtggtggaga atttcaaaga gtgcttttag
     3541 caagagcctt gcttaaaaaa cccaaaattc tttttttaga tgaacccact tcagcacttg
     3601 atttaaacca tgctatcgag cttttaagcc tttgcgaaag attgataaag cagaacaata
     3661 tcgcagttgt agcgattttg catgatttaa atttagcctc tatgttttgt gataaggtat
     3721 tgtttttaaa agaaggagaa ataaagtatt ttggaagtac aaaagagctt tttaccaaag
     3781 aaattctaaa agaaatttat aatttaaatt gcgagattgt ctataaagac ttaaaacctt
     3841 atatcttagc cttaaaggaa aaaatatgaa aaaaatttta atcattatga gtttattttt
     3901 aaccctactt aatgccaaag aacgcattgt agtgcttgat cctgcaagta tagaaacact
     3961 ttttatgcta aatgcacaag atcaaatcgt aggtattgca aatttgcaac actcaaatat
     4021 ctaccctgaa gaaaaaactt caaaaataac tagcgtagga actttttcac acccttctct
     4081 tgaaaaaata gttgccctaa agccaagctt agtgatatta agctcgtatt ctttaaattt
     4141 agaagaaggg cttaaaaact ttggaatcaa aagtatcaat ttaaaagccc aacgccttga
     4201 tgaaatcaaa agcaatatcc aaattcttgc aaaactcaca gacaaagaag agcaaggcaa
     4261 aaaactttta gaagaatttg aacaaggatt acaagaattg caaaaaaatc ccttaaataa
     4321 aagcggaatt tacctttatt ctagtaatcc actcatggcc tttaatgata attctttaat
     4381 agcggatata ttaagactca taggcattaa aaacctaagt cctcaaagtg aaatagcgcg
     4441 tcctataatc tcagcagaat acatcctaaa acaaaatcct gatttgttga tcttaggcat
     4501 taatgcagat ggcaacattt taaatgccaa tgctttgtta aaaaatacaa aggcagctca
     4561 aatgggacaa atttatcaca atgaaaacac tcatatattg ttacgcttaa gcccaaaaat
     4621 catagataga attaaagaat ttaaaacaag attagaaaat caaaattttt aatcgctcaa
     4681 tcttgtttta aaaaattcac agctttgaca aagcttttct atacgcttat tttcttcaaa
     4741 ggcctttttg atttcttgaa tgcgtttgga ctcaagaagg ctcttaaatt cagcattaaa
     4801 aacattaccc aaagatatat cgcctttagt atccaaacaa caaggtacga gcgtgccatc
     4861 acttaaaatg cctatttgct cttttaaagc atggcatttt ccttgagtat aaaggggctt
     4921 atcttttaaa cttggccatt taaaaagctt gttttgatga agcaaaatat gcctttgaag
     4981 acgattttta gccaagtgtg taagaattcg aaccccaaat tctttactta aaaattcata
     5041 aatgggcaaa ttttcgctag ggactttaaa gttagtatct aaattccaaa gtctaagatt
     5101 gataaagctt gattttttat actctaaatg ctctttgcaa aactctaaaa taggcttaaa
     5161 atattgctct aaagaaagtt tgctttgact taaaaaggcc attaaagaga tattgatttg
     5221 atggatattg tcgtatttta ataacaattt agaattttta ggactaaaat aaaaaccact
     5281 tgtggtaatt tctaatttca tttgatgatt tttagcaatt tgtagatatt cttctaaatt
     5341 atttaaaagc aaaggatctc ccaaaagatg aaaggtaaaa atttcgcttt tatcccaaat
     5401 ttgccttgca agtttggaaa aattttctac actcatcact ccacgcaagg ctttttttga
     5461 gggacaaaaa tcacatttta aaccgcaaat atcgcttaat tctatgtata attttttaaa
     5521 t
//
LOCUS       DAQUWA010000095         5387 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.095, whole genome shotgun sequence.
ACCESSION   DAQUWA010000095 DAQUWA010000000
VERSION     DAQUWA010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5387
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.095"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            145..846
                     /locus_tag="R8X70_001724"
     CDS             145..846
                     /locus_tag="R8X70_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HEF2929476.1"
                     /translation="MDLEKLRLARSLYYQCLGELFVFSFSENRLCNLKAYLEAMQEGL
                     FDESLRTSFEILLRNLQDAQDLQAFYKEYDELFLALKNTIPMTFSYIEEGFENSKALL
                     NVRQILAKSTIRRNEKIFKEAEDSVGFCFVLMSEFLKNKEDELAKALFEKVINQSIDE
                     FLMLIFSNSKAKLYKEIANIVVQFIEFERYCFELEKPTIKPSKKVQNDLSRSEFLRRE
                     ANKQRRSREKSQGIS"
     gene            821..1012
                     /locus_tag="R8X70_001725"
     CDS             821..1012
                     /locus_tag="R8X70_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEF2929477.1"
                     /translation="MKNRREFLKKSAIALGTASLLGGASVAFGQDEERKDLVRGKSKK
                     KEVLYQRSANWEKYYMRAE"
     gene            1012..1554
                     /locus_tag="R8X70_001726"
     CDS             1012..1554
                     /locus_tag="R8X70_001726"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEF2929478.1"
                     /translation="MSSMNETIKLNRRSFLKMAALSSLATPLLARSETLREANADELK
                     EAYEGSQKIKSVCTACSVGCGIIAEVQNGVWLRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAY
                     YIRKFAAFFGTNNVDHQARI"
     gene            1603..3816
                     /locus_tag="R8X70_001727"
     CDS             1603..3816
                     /locus_tag="R8X70_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002797101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEF2929479.1"
                     /translation="MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIV
                     VDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREE
                     AAKWTAEEVENVTGISKELLIQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQ
                     MVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEVTWRYYAKIWGVDYE
                     WLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQ
                     QVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQW
                     RFKIIDPLYESKEDQEILFELAKKLGFYEDFTKTLRDENGKIVWPENATREIASAVRS
                     IGLNGWSPERLKKHTLNWDKFDEVTLEGKDELAGEYYGLPWPCWSDKHPGSPVLYNTD
                     IEVAKGGMGFRNNFGLEYEGENLLAKNAPINSPIDTGYPQITKDNIEKVLGITLSAEE
                     KEKMGAIWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDQIPLHREPLHSPRNDL
                     VQKYPSFEDQKALYRVDTKFVSVQKAKDYSKEFPLNLVTARLVNLNGAGMENRASMYL
                     TRLTPEMFCEINPELASEQKIKAGDMIWVHSPEGTKIHVRVKFNPGVAKDMIFLPFHF
                     TGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGV"
     gene            3820..4461
                     /locus_tag="R8X70_001728"
     CDS             3820..4461
                     /locus_tag="R8X70_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEF2929480.1"
                     /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCSVACDEAHELPINIR
                     RRRVITLNEGVQGKEVSTSISCMHCDDAPCAIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPESTNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEEIYHSRLQSRGYGIANPSQSIEWKIAYIGKERL"
     gene            4458..>5387
                     /locus_tag="R8X70_001729"
     CDS             4458..>5387
                     /locus_tag="R8X70_001729"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEF2929481.1"
                     /translation="MKKILITLLSTFVSLFAYGSERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAIIAVLSAFALHYMVIGPKQFSHAGKKIYAFSLFERIFHF
                     IAAISWVILVPTGFVMMFGATFGGGVFVRVCKNLHAFATILFIISIIPMFLWWIKRML
                     PASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRLSAIIHNFLGIICAVFFGIHIYMAVFAIKGSIHSMVSGYK
                     EEEEVYILHSYWYKELSSKKQIEPSFSYDPNVKI"
BASE COUNT         1822 a          733 c         1139 g         1693 t
ORIGIN      
        1 aaatttcagt ttattttaaa acaaatcata ttaagataaa tcagtcaaaa ataaggatta
       61 agaaggaaaa ttaggtgtaa tttgcataat attattttgc aaattattta acggcaaatc
      121 ttcaaaaatt tgaatgagtt aaaaatggat ttagaaaaac taagattagc tagaagtctt
      181 tattatcagt gcttaggaga acttttcgtt ttttcatttt ctgaaaatag attgtgtaac
      241 ttaaaagctt atttagaagc tatgcaagag ggtttatttg atgaaagttt aagaacaagc
      301 tttgaaattt tacttcgtaa tttacaagat gcacaagatc ttcaagcatt ttataaagaa
      361 tacgatgagc tttttttagc acttaaaaac actattccta tgactttttc ttacatagaa
      421 gaaggctttg aaaattcaaa ggcattgctt aatgtaaggc agattttagc taaaagcaca
      481 atccgccgca atgaaaaaat ttttaaagaa gctgaagata gtgtaggatt ttgttttgtt
      541 ttaatgagtg aatttctaaa aaataaggaa gatgaacttg ctaaggcatt gtttgaaaaa
      601 gtcatcaatc aaagcattga tgaattttta atgcttattt tttcaaattc aaaagcgaag
      661 ctttataaag aaatagcaaa tattgttgtg cagtttatag aatttgaaag atattgtttt
      721 gaacttgaaa aacctactat aaaaccttcc aagaaagttc aaaatgattt atctcgttct
      781 gaatttttaa gaagagaagc aaataaacaa aggagatctc gtgaaaaatc gcagggaatt
      841 tcttaaaaaa tctgctattg ctttgggtac tgcaagtctt ttaggcggtg caagtgtagc
      901 ttttgggcaa gatgaagaaa gaaaggatct tgttagaggc aaaagcaaaa agaaggaagt
      961 gctttatcaa agaagtgcta attgggaaaa atattatatg agggctgaat aatgtcaagt
     1021 atgaatgaaa ccatcaagct taatcgccgt tcttttctta aaatggccgc gctttcaagc
     1081 ctagcaacac cgttgcttgc tagaagtgaa actttaagag aagcaaatgc ggatgaatta
     1141 aaagaagctt atgaaggaag tcaaaagatt aagagtgtat gtaccgcatg ttctgtaggc
     1201 tgcggaatta ttgcagaagt tcaaaacgga gtgtggttgc gccaagaaat cgcacaagat
     1261 caccctgtta gctcgggagg ccattgctgt aagggctctg atatgatcga tatggtgcgt
     1321 tctcatgtgc gtttaaaata ccctatgaaa aaagaaaatg gagaatggaa acgcataagt
     1381 tatgagcaag ctttaagtga gatcggagaa aaactagctg cttatcgtaa agaaaatcct
     1441 gaaagtgtta tgtttttagg ttctgcaaaa cttaataatg aacaagctta ttatataaga
     1501 aaatttgcag cattttttgg aacgaacaat gtagatcatc aagctagaat ttgacacagc
     1561 gcaacagtcg ccggtgtggc gaatacattt ggttatggcg ctatgacaaa ccatcttgga
     1621 gatattcaaa gaagtaaatg tattattatt attggagcaa atccagcagt aaatcaccct
     1681 gtaggtttta gacacttctt aaaagcaaaa gaaaaaggtg ctaagcttat cgttgtagat
     1741 cctagattta caaagagtgc agcaaaagca gatatttatg caagaattcg tccaggtact
     1801 gatattgctt tcatgtatgg aatgttaaaa atcatttttg atgaaggttt agaagataca
     1861 aaataccttg atgaaagagt ttttggtatt gataaaattc gtgaagaagc tgcaaaatgg
     1921 actgctgaag aagtagaaaa tgtaacagga atttctaaag aactcctcat tcaaatcact
     1981 catgaagtag ctaaaaataa accaactaca ttgatttggg ctatgggctt aacacagcac
     2041 accgtaggaa cttcaaatac gcgtttagca cctatagtac aaatggtttt aggaaatata
     2101 ggtaaattcg gcggcggggt aaatatttta cgcggacacg ataatgttca aggtgcttcg
     2161 gatatggctt gtttgagtga aaatttacca ggctattatc ctttaaatga agtgacttgg
     2221 agatattatg ctaagatttg gggcgttgat tatgagtggc ttttaggaaa ttttgtaagt
     2281 aaagattgga tgcataaaac tggactttca cttgctagat ggtgggcagc ggctttaaat
     2341 ggaaaagatg gaaatgatgc tatcgataat gcaggaacgc ctttaaaagc tttagtagtt
     2401 atgggaaatg gtatcacttc gactgcacaa caagtaaaag ttaaagaagg tttggaagct
     2461 ttagagcttt tagttttagc cgatcctttt gtaaatgaag cagggattat cgcagaaaga
     2521 aaagatggaa tttatctttt acctgctgca acgcagtttg aaacaagtgg aagcgtaaca
     2581 gctacaaatc gtagcggaca atggagattt aagatcatag atccacttta tgaaagcaaa
     2641 gaagatcaag aaattttatt tgagcttgcc aaaaaattag gtttttatga agactttact
     2701 aaaaccttac gcgatgaaaa tggcaagatt gtttggcctg aaaatgctac tagagaaatt
     2761 gcaagtgcag ttagaagtat aggacttaat ggttggagcc ctgaaagact taaaaaacat
     2821 actttaaatt gggataaatt tgatgaggtg actttagaag gcaaagacga attagcgggt
     2881 gaatactacg gacttccttg gccttgttgg agtgataaac atccaggatc tcctgtgctt
     2941 tataataccg atatcgaagt agcaaaaggt ggtatgggat ttagaaataa tttcggactt
     3001 gagtatgagg gtgaaaattt attggctaaa aatgctccga taaattcacc tatagataca
     3061 ggctatccac aaattactaa agataatata gaaaaagttt taggtattac tttaagtgct
     3121 gaagaaaaag aaaaaatggg tgcaatttgg tcttatgatg atagtaatat catagcgact
     3181 aaatgtatag aaaaaggtat agtgccttat ggaaatgcta aagctagggc tgtggtttgg
     3241 acatttaaag atcaaattcc acttcaccgc gagccacttc attctccaag aaatgatttg
     3301 gtgcaaaaat atcctagttt tgaggatcaa aaagcgcttt atcgtgtgga tacaaaattt
     3361 gtttctgtgc aaaaggctaa ggattattca aaagaattcc cactcaacct agtcacagca
     3421 agacttgtaa atttaaatgg tgcgggtatg gaaaatagag cttcaatgta tcttactcgc
     3481 ttgacacctg agatgttttg tgagataaat cctgagcttg caagtgagca aaaaattaaa
     3541 gcaggggata tgatttgggt gcattctcca gaaggaacta aaattcatgt gagagtaaaa
     3601 ttcaatccag gtgtagcaaa agatatgatt ttcttacctt tccattttac aggtgtgatg
     3661 cagggtgtgg atttaacgca caatttccct aaaggaacta aaccttatgc aagtggagaa
     3721 agtgcaaata cggttacaaa ttatggttat gacattatgt gtcaaattcc tgaaaccaag
     3781 ggcggcttat gccgtatctc aaaagatggg gtgtaaaaga tgagtaaggt aaattttgca
     3841 aatttagaaa aagaacgctt gaaattcttt tgtgataatg agcgttgtat tgattgtaat
     3901 ggatgttcgg tagcttgtga tgaagcgcat gaacttccta tcaatatccg tcgtcgtcgt
     3961 gtcatcaccc ttaatgaagg agtacaagga aaagaggtgt ctacttcgat ttcttgtatg
     4021 cattgtgatg atgcaccttg tgctatagtt tgccctgtgg attgttttta tatccgtgca
     4081 gatggtattg ttttacacga taaagaaatt tgtataggtt gtggttattg tctttacgct
     4141 tgtccttttg gtgctccaca atttccaaaa gatagcgtat ttggtaacaa aggcattatg
     4201 gataaatgta cgatgtgtgc aggtggacct gaaagtacaa attcggaaaa agaaagagag
     4261 ctttatggac aaaatcgtat cgctgaagga aaagtgcctg tatgtgcagc tatgtgctca
     4321 accaaagcac ttttagtagg tgaaagctct aagatagaag aaatttatca tagcagattg
     4381 caaagtaggg gttatggaat tgctaatcct tcgcaaagta tagaatggaa aattgcttac
     4441 ataggaaagg aacgcttatg aaaaaaatat tgataacact tttaagcact tttgtaagtt
     4501 tgtttgccta tggcagtgaa cgaatgggac aagatacaca aatttgggat tttcatcgta
     4561 ttacaaatat tccaaattat gatacttttg gtaagctttg gacaactttg caaggtgagt
     4621 atatagctac tatagctttg attgcaatca ttgcagttct ttcagctttt gctttgcatt
     4681 atatggtgat aggtccaaaa caattttctc atgctggaaa gaaaatttat gctttttctt
     4741 tatttgaaag aatttttcat tttatcgcgg ctatttcgtg ggtgattttg gtacctacgg
     4801 gttttgtgat gatgtttggt gcaacttttg gaggcggcgt atttgtaaga gtatgcaaaa
     4861 acttacatgc ttttgcaacg attttattta tcatttctat cattcctatg tttttatggt
     4921 ggataaaaag aatgcttcct gctagttatg atatcagatg gatgatgata gtgggtggtt
     4981 atctaagcaa ggtaaaacgc cctgttcctg cgggtaaatt taattttggg caaaaatctt
     5041 ggtattatat tgccgtattt ggtggatttt tgatgattat tacaggcggc tttatgtatt
     5101 tccttgattt taattctact gccattcaag gtctttttgg tttaacacaa attgagcttt
     5161 taagactttc agctattatt cacaatttct taggaatcat ttgtgcagta ttctttggaa
     5221 ttcacattta tatggcggta tttgctatta aaggaagtat tcattctatg gtaagtggat
     5281 ataaagaaga agaagaggtt tatatcttgc atagctattg gtataaagaa ttaagcagta
     5341 aaaaacaaat tgaacctagt ttttcttacg atcctaatgt aaaaatt
//
LOCUS       DAQUWA010000096         5364 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.096, whole genome shotgun sequence.
ACCESSION   DAQUWA010000096 DAQUWA010000000
VERSION     DAQUWA010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5364
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.096"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..421)
                     /locus_tag="R8X70_001730"
     CDS             complement(<1..421)
                     /locus_tag="R8X70_001730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEF2929482.1"
                     /translation="MFRLSSVSSKLLLSVAISIIVAIALIIAIVSFQVASYSEKEAKN
                     AILLSSKRHVNYIQGILNEEVTLTKVVATSLNEMFQNNDHVDIDLIESLIKNAFDSSH
                     YAAYTFLYLKDTTVLSDMQNVDKKYISPDGKTFSMIFF"
     gene            complement(534..1043)
                     /locus_tag="R8X70_001731"
     CDS             complement(534..1043)
                     /locus_tag="R8X70_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HEF2929483.1"
                     /translation="MQFTIFHILAFVILLLCFVLVCILIFLKVKQKEFALISYTIATI
                     FTALLIYSVFLTINQFTTQASLSKLTFSRDLRHESIIITGRVQNLTKFNIRKCYLMLN
                     ILNKKRVGGEIFEEKNVRNAKMQNTSVSYTIEIIDTLPGNTYKEFRVSVPFPPSFNNP
                     EFYHTLKCI"
     gene            complement(1043..1573)
                     /locus_tag="R8X70_001732"
     CDS             complement(1043..1573)
                     /locus_tag="R8X70_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HEF2929484.1"
                     /translation="MERLKEIVHFYTTHLYLVDYMLILFVFFLFTCVLLLCIFLRHKP
                     VAALLIIALNIIICFLIYTYGYKFIDSEVRSRKTTIVEQKFIQSSEALIIDFNITNTS
                     KNDFKQCKVIARIFKDKLPEDNLINEYKNQLIPFRQKSREIFNLKKNTTQFQRISFDN
                     FNYDNNYTIRLNSECF"
     gene            complement(1584..2666)
                     /locus_tag="R8X70_001733"
     CDS             complement(1584..2666)
                     /locus_tag="R8X70_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HEF2929485.1"
                     /translation="MPADLNDYFNKKNGNSNNNNNRQNFNFKAPEFNFKGFGKFSPFV
                     YGVIIIVLFLIIAKPFMVINSGEMGIKSTTGRYDPNPLEPGLHFFIPFIQKITTIDTR
                     VRQINYASIEGSNENLTSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQTIA
                     TWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNAIATQIEEGIRKTIEAQPNEPV
                     ELRAVQLREIILPLKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEANAT
                     IISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAKIF
                     LTPGGAVPNIWVDTKDAKKQSSTNMN"
     gene            complement(2682..3596)
                     /gene="ilvE"
                     /locus_tag="R8X70_001734"
     CDS             complement(2682..3596)
                     /gene="ilvE"
                     /locus_tag="R8X70_001734"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEF2929486.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLNCPFSQKELEKAQIELLKVNDFKNNVYIRPVIFL
                     GDGVMGLYHVKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFVRNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSI
                     TQDTVLKIAHDLGLTVLRQRISRDEVYTADEAFFTGTAAEITPINNVDARIIGSGIRG
                     SITKKLQDAYFDVVYGRNEKYASMLTYI"
     gene            3923..4129
                     /locus_tag="R8X70_001735"
     CDS             3923..4129
                     /locus_tag="R8X70_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEF2929487.1"
                     /translation="MPIVNIKLAKPALSKEQKAELIADITELLSTKYNKSKERVVVML
                     EDIESYDIGFGGESVEAIKAKANK"
     gene            4126..4584
                     /gene="bcp"
                     /locus_tag="R8X70_001736"
     CDS             4126..4584
                     /gene="bcp"
                     /locus_tag="R8X70_001736"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HEF2929488.1"
                     /translation="MSILKVGDEAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTP
                     GCTTEACDFSANYDKFCDKNAVIIGVSPDGVTSHDKFIAKFNLKHILLSDSEKEVAKA
                     YGAWGLKKNYGKEYEGIIRSTFVIDEAGKIAQIYSNVRVKDHALKVLESL"
     gene            4584..>5364
                     /locus_tag="R8X70_001737"
     CDS             4584..>5364
                     /locus_tag="R8X70_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEF2929489.1"
                     /translation="MLVHICCSVDSHYFIEELRKEYPKEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLGIKLYKGEYEYEKWLKAVKGYEDEPEKGARCEICFDLRMGSSVEFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKNFIDELMSPINAQILPASIEARIALYKKVNLLEKKG
                     IKFEIIRQKFLNYRLLSALIKLDKKAVKSHILFYSHFKNHYT"
BASE COUNT         1898 a          779 c          846 g         1841 t
ORIGIN      
        1 caaaaaatat catagaaaaa gtttttccat ctgggctaat atatttttta tctacattct
       61 gcatatcact taatacagta gtatctttta aatagagaaa tgtatatgct gcatagtgac
      121 tactatcaaa agcatttttt ataagacttt caattaaatc gatatctaca tgatcattat
      181 tttgaaacat ttcatttaac gatgtagcaa ctactttggt tagtgtgact tcttcattta
      241 agataccttg tatataattc acatgtcttt ttgaagataa taaaatagca tttttggctt
      301 ctttttctga atatgaagca acttgaaaag aaacaatagc aattataaga gctatagcta
      361 caataatact aatagcaact gataataaga gtttcgaact aacgctagat agtctaaaca
      421 tgaaaaacct cacataaatt ttttactaaa aataaatttc gttagcatat caaaaaaaaa
      481 taaaattaat ataaaattat tttttataga tgttttaaaa ctatttaaca atatcaaata
      541 cattttaagg tgtgataaaa ttcaggatta ttaaaacttg gaggaaaagg aacgctaact
      601 ctaaattctt tataggtatt acccgggagt gtgtctatga tttctatagt ataagaaaca
      661 cttgtatttt gcatcttggc attgcgcaca tttttttcct caaaaatttc ccctccaact
      721 cgctttttat ttagtatgtt tagcattaaa tagcatttac gaatattaaa tttggtaaga
      781 ttttgcactc ttcctgtaat aataatactt tcatgtctta aatctctaga aaaggtaagt
      841 ttgctaagac tagcttgggt tgtgaattga ttgatagtga gaaatacaga ataaattaaa
      901 agtgcggtga aaatggtcgc gatagtatag gaaataagag caaattcttt ttgcttcact
      961 tttaaaaaaa ttaaaataca aactaaaaca aagcaaagaa gcaagataac aaaagccaaa
     1021 atatgaaaaa ttgtaaattg cattaaaaac actccgaatt gaggcgtatg gtgtaattat
     1081 tgtcatagtt gaaattatca aaagaaattc tttgaaattg agttgtattt tttttcagat
     1141 taaaaatttc cctgcttttt tgcctaaagg gaatgagttg atttttatat tcattgatga
     1201 gattatcttc gggtaattta tccttgaaaa ttctagcaat cactttacat tgtttaaagt
     1261 cgtttttaga agtatttgtg atattaaaat caataattaa agcttcagag ctttggatga
     1321 atttttgttc tacaatggtt gtttttctac tccttacttc gctatctatg aatttatatc
     1381 catatgtata aatcaaaaaa caaataatta tattaagtgc gatgatcaaa agagccgcca
     1441 caggtttgtg gcgtaaaaag atacacaaga gtagaacgca agtaaagagg aaaaagacaa
     1501 ataaaatcag catataatcc actaaatata agtgagtagt gtaaaaatgc acaatttctt
     1561 ttagtctttc caccttgtat atcctagttc atgttagtag aactttgttt tttagcatcc
     1621 ttagtatcca cccaaatatt tggtactgct ccaccaggag ttaagaaaat tttagcatct
     1681 tgattgactt tcaaggcttc attaaattct ttttgggttt caatttgttt taagttaagc
     1741 aaaggagtat ttaaactatt cgcaatttct ttattagaat aagcttgcgc atctgcttct
     1801 atttttacag ccattgcttt acctttagca ctgatgatgg ttgcatttgc ttccccttca
     1861 gccaaagcag ctttttttaa agcttcttga tttgctcttt ctacctcata tttagttctt
     1921 tctgcttctt gttttgcaat ttgcacgcgt tcaatttgct cttttacttt caaaggcaat
     1981 ataatttctc taagttgaac cgcacgaagt tccactggct cattaggttg tgcttctatg
     2041 gtttttctta tcccttcttc gatttgagtt gcgattgcat tacgatttgt tggcaactct
     2101 tcagcagtat attttcctac aacacttcga accacatcac gcaccacagg atctatgatt
     2161 ttattttccc aatttaaact ccaagttgct atagtttgag gaacttgtaa aggatttaag
     2221 cggtattgaa ctgttacatc aatagaaaca ggcaagccgc gtgaatcaag cacagaaatg
     2281 ctgtttttat taattacacc tgaacctgaa gttaaatttt cattacttcc ttctatagaa
     2341 gcataattga tttgtcttac tctcgtatca attgtagtta ttttttgtat aaaaggtata
     2401 aaaaaatgga gtcctggctc taaaggattt gggtcgtatc tacctgtagt ggatttaatc
     2461 cccatttctc cagaatttat caccataaaa ggttttgcga taattaaaaa caaaacaata
     2521 ataattacac cataaacaaa aggagaaaat tttccaaaac ccttgaaatt aaattcagga
     2581 gctttgaaat tgaaattttg tcggttgtta ttgttattcg aatttccatt ttttttattg
     2641 aaataatcat tcaaatcagc tggcatttat ttcctttatc tttaaatata agttagcata
     2701 gatgcgtatt tttcattgcg tccataaact acatcaaaat aagcatcttg aagtttttta
     2761 gtaatagaac ctcttatacc actgcctata attcttgcat caacattatt aataggagtg
     2821 atttctgcag cagttccagt aaaaaatgct tcatcagcag tataaacctc atcccttgaa
     2881 attctttgac gaagtacagt taaaccaaga tcgtgagcga ttttaagaac tgtgtcttga
     2941 gtgatacttt ttaaagaaaa atcattaggt ggagtgatta aaactccatc ttttacgata
     3001 aagaagcact ctcccgtacc ttctgctata aaaccctctt catcaagcat caaagcttct
     3061 tcatatcctg cttcaatagc ttcaaatttt gcaatttgag agttaagata gtttgcgctc
     3121 gcttttgctt tacccataca agattttaca ctatttctta caaaagatga aatttttact
     3181 ttaatacctt tttctaaacc ttcttcaccc aaataagcac cccattccca agcagcgata
     3241 ccaacacgca caggagcttt tacatgataa agtcccatta ctccatctcc taagaagatt
     3301 acagggcgaa tatagacatt gtttttaaaa tcatttactt ttaaaagttc aatttgtgcc
     3361 ttttcaagct ctttttgaga aaaagggcag tttaaaagag taattttagc agattctaaa
     3421 agtcttttag tgtgatcttc aagtctgaaa atcgctaagc ctttatctgt tttataagct
     3481 cttgttcctt caaaaacagc attaccataa tgtaaagaat gggttaaaaa gtgcaaggtt
     3541 gcatctttaa aatcaactaa ttttccatcc atccaaattt tatctgctga gatcattttt
     3601 agccttaata gtcatatttt tgttaaaaaa cttttaattt tagcaaaagt aaattaatga
     3661 tagcttgata tataaagtat aaatttaaac atttatgaag gattttaata aaaaataaaa
     3721 tcaaactttt agaatttatc gagtcgattt tattaaggat atggcctttt tctgatgatt
     3781 aaaataagaa tgagaaattt aataccacga tttttaagtc aagattgtga aaaactgaat
     3841 taaatttttt atagaattta gtgtaaattt aaaaatttat ttattaaagt ttgaaataat
     3901 tataaaaatc aaaggagaaa aaatgccaat tgtaaatatt aaactagcaa agccagcttt
     3961 aagtaaggag caaaaagctg aattgatagc cgatataact gagcttttaa gcacaaaata
     4021 caacaaaagc aaagaaaggg tagtggtgat gctagaagat atcgaaagtt atgacatagg
     4081 ttttggtggt gaaagcgtag aggctattaa ggcaaaggca aataaatgag tattttaaaa
     4141 gtaggggatg aggcgccaca atttgaactt ttaaatcaag atggggtgaa aatcgctctt
     4201 aaagatttta ttggtaaaaa agtgatttta tatttttatc ctaaggacaa tactccaggt
     4261 tgcaccacag aagcttgcga ttttagtgca aattatgata agttttgtga taaaaatgca
     4321 gtgattatcg gtgtaagtcc tgatggtgtg acaagtcatg ataaatttat tgctaaattt
     4381 aatttaaagc acatattatt aagtgatagc gaaaaagaag tggcaaaagc ttatggagct
     4441 tgggggctta agaaaaatta tggtaaagaa tatgaaggca ttataagatc gacttttgtt
     4501 atcgatgaag cgggaaaaat tgcccaaatt tatagcaatg tccgcgtaaa agatcatgca
     4561 ctaaaagtgc ttgaaagtct ttaatgttgg tgcatatttg ttgtagtgta gacagtcatt
     4621 attttataga agagcttaga aaagaatatc ctaaagaaaa aattatagga tatttctatg
     4681 atcctaatat ccatccttta agcgaatatg aattaagatt tttagatgta aaaagatctt
     4741 gtgataagct cggtatcaag ctttataagg gcgagtatga gtatgaaaaa tggctaaaag
     4801 ctgtaaaagg ctatgaagat gagccagaaa aaggtgcaag atgtgaaatt tgttttgatc
     4861 taagaatggg ttcaagtgta gaatttgcag ccaaaatagg agaaaaaaag cttacaacaa
     4921 cacttttaac aagccctaag aaggatttag agcagttaaa aaatgctttg caaaaagagt
     4981 gtgagcctta tggggtggaa tttttagctc ctgattttcg taaaaatgga ggcactcaaa
     5041 ggcaatttgc tttagcaaaa aaagaaatgc tttatcatca aaattattgc ggttgtattt
     5101 atgggcttaa aaagcaaaag caagataaaa actttattga tgaattaatg tcacctatta
     5161 atgctcaaat tttacccgca agcatagaag ctagaatagc tctttataaa aaagttaatt
     5221 tattagaaaa aaagggtata aaatttgaaa tcataagaca aaaattctta aactaccgac
     5281 ttttaagtgc tttaataaag cttgataaaa aagccgttaa gagtcatatt ttattttatt
     5341 ctcattttaa aaatcattat acaa
//
LOCUS       DAQUWA010000097         5135 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.097, whole genome shotgun sequence.
ACCESSION   DAQUWA010000097 DAQUWA010000000
VERSION     DAQUWA010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5135
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.097"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..2299
                     /locus_tag="R8X70_001738"
     CDS             <1..2299
                     /locus_tag="R8X70_001738"
                     /inference="COORDINATES: protein
                     motif:HMM:NF024486.1,HMM:NF024487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929490.1"
                     /translation="NIKSSYIDFINLSQNIAKELSSLKNICIDKFYNKAIKIIERDVP
                     LLGNKFRISVNLTKTMNENVFLNSFYIQELANILNNYEENKFPMIDKYLSNKIKQRID
                     IKTNQLEILENYIDELAPSSFVSQFALMYSQQFAVNKILKMNKDHNDIYSINGPPGTG
                     KTTLVKDIIAGIITQRAIEISKLNYDEIIKKEDGIYKLNEKLKGYEIILSSSNNNAVE
                     NISKEIPTNNGIDSSYIQDLDYFSEIATRFLNQNKKTEVKAWGLICGILGNNSNKSSF
                     IYNVLKDFKSKEYEFIGLINYIKNNKLTDKDFEQAKNDFNQALRRVNNLLDKNKKEKH
                     IIQKVKIYNKLKNDSSLINTITYLYKILSYRLMGKSYVKNIKKHISFLNQKFYLHDEA
                     SMEKSSFFMVENGETTELSKARKDLFVKALNLHKVAILSNNLYFAQNLEVLSDILENN
                     NYRNLSENKIVEIWKSLFFIIPSISSTYASFGSCFKDIGHNQFGYLISDESGQSTITS
                     AIGAIYRTKKAIIIGDPLQLEPIVNIPNNINNFFTQYFNIDKAFDVKNTSLQSRCDFL
                     QSYGRYIYQDSQKIWLGSPLRVHNRCDRPIFELSNKIAYGGMMIYGKKNENTLQLQNT
                     WYNIKEEQWNGNCNEREIEYLHILLDEITQYDLEIGIITPFVDVKQKLKDIANKYNNL
                     KDDKIGTIHTMQGKEADIIILILGGNNENARNWVASRPNLINVALTRAKNTIFIIGNK
                     EKYIKLNYFNHLESMHTITPSFSNL"
     gene            complement(3382..3498)
                     /gene="rrf"
                     /locus_tag="R8X70_001739"
     rRNA            complement(3382..3498)
                     /gene="rrf"
                     /locus_tag="R8X70_001739"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(3834..>5135)
                     /locus_tag="R8X70_001740"
     rRNA            complement(3834..>5135)
                     /locus_tag="R8X70_001740"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         1979 a          942 c          703 g         1511 t
ORIGIN      
        1 aaatataaaa tcatcttata ttgattttat taatctaagc caaaacattg ccaaggaact
       61 gtcttcgctt aaaaatatat gtattgataa attttacaat aaagctatca aaatcataga
      121 acgcgatgtt ccattacttg gaaacaaatt tagaatatca gttaatctta ctaaaactat
      181 gaatgaaaat gtatttctaa atagttttta tatacaagaa ttagcgaata ttttaaataa
      241 ttatgaagaa aacaaatttc ccatgataga taagtatcta agcaataaaa taaaacaacg
      301 tatagatata aaaacaaatc aattagaaat tttggaaaac tatattgatg aattggctcc
      361 tagctctttt gtaagtcaat ttgcattgat gtattctcaa caatttgcag taaacaaaat
      421 acttaaaatg aataaagatc ataacgatat ctactctatc aatggacctc cagggactgg
      481 aaaaacaacg cttgtaaaag atatcatagc aggtattatt actcaaaggg ctatagaaat
      541 ttcaaaacta aattatgatg aaattataaa aaaagaggat ggaatttata agctaaatga
      601 aaagctaaaa ggttatgaga tcatactatc ttctagtaac aataatgctg tagaaaatat
      661 aagcaaagaa atacctacaa ataatggtat cgatagtagc tatattcaag atcttgatta
      721 ttttagcgag atagctacaa gatttttaaa ccaaaataaa aaaactgaag ttaaagcttg
      781 gggattgata tgtggtatat tgggtaataa ctccaataaa tcttctttta tatacaatgt
      841 tttaaaagat tttaaatcaa aagaatatga atttatcggt cttataaatt atataaaaaa
      901 caataaactc accgacaaag attttgagca agcaaaaaat gatttcaatc aagcattgcg
      961 tagagttaat aatctgctag ataaaaacaa aaaagaaaaa catataatcc aaaaagtaaa
     1021 aatttacaac aaactaaaaa atgatagcag tttaatcaat actattactt acctatacaa
     1081 aatactttca tatagactta tgggaaaaag ttatgtaaaa aatataaaaa agcatatctc
     1141 ttttctcaac caaaaatttt atttacatga tgaagcgtct atggaaaaat cttcattttt
     1201 tatggtagaa aatggcgaaa caacagaact ttctaaagca cgaaaagact tatttgtaaa
     1261 agcacttaat cttcacaaag tagccatact aagtaataat ctatattttg ctcaaaattt
     1321 agaagtatta agtgatattt tagaaaacaa caactatagg aatctttcgg aaaataaaat
     1381 tgttgaaata tggaaaagtt tattttttat aataccatcg attagttcca cttatgcttc
     1441 ttttggctct tgttttaaag atataggaca taatcaattt ggatatctaa tcagcgatga
     1501 atcaggacaa agcactataa caagtgccat tggggctata tacagaacaa aaaaagccat
     1561 cataatagga gatccactac agcttgaacc tattgtaaat attccaaaca atataaataa
     1621 tttttttaca caatacttca atatagataa agcttttgat gttaaaaata cttctttaca
     1681 aagtagatgc gacttcttgc aatcatatgg aagatatatt tatcaagaca gtcaaaaaat
     1741 atggttaggc tctcccttgc gtgtgcataa tcgctgcgac cgacctatat ttgaactatc
     1801 taataaaatc gcatatggcg gtatgatgat atatggaaag aaaaatgaaa acaccctaca
     1861 attacaaaac acttggtaca atatcaaaga agaacaatgg aatggtaatt gcaatgaaag
     1921 ggaaatagaa tatttacaca tacttttaga tgaaattact caatatgatc tagagattgg
     1981 aatcattacg ccatttgtag atgttaaaca aaaattaaaa gatatagcca ataaatataa
     2041 taatttaaaa gatgataaaa ttggtactat acatacaatg caaggaaaag aagcagatat
     2101 aatcatactt atcttaggtg gaaataacga aaatgctaga aattgggtag catctaggcc
     2161 aaatttaatc aatgttgcat taactcgagc aaaaaataca atcttcatta taggcaataa
     2221 agaaaaatac ataaaactta attattttaa tcatttagaa agcatgcata cgattacacc
     2281 ttcattctcc aatctttaat cattacttgg ctttaacaat ctcaaatatc tcattctttt
     2341 atcttgtaaa catagtttca aaccctatat ctttacaaaa accaaccaat tctcactatc
     2401 taatcccacc caaacccaaa caagccataa attacacaca cttttttaca aacatcaatt
     2461 aaatagcaag actatcgatg ataaaaaatt tatctcaagt ataacattca ttctcgccaa
     2521 caagaataaa caatcatagt ctatccaccc tagcccaaca ttaaccccta acccaaccaa
     2581 gaagtgtata ccccccgcca acccataaaa cctcaataaa cactataaaa taaacttgag
     2641 tgattaaaaa tccaacccaa ttattgaaca aaccaagcta cataataaaa tataaactag
     2701 acaaagaaca attgacacat aaaaatagat tgaataaata aacctataca agtaaacata
     2761 aagattaatt attgatacaa aagatttaat aaataaaaag aataattgag atataaaaac
     2821 atataaacta aacaactcaa acaaccatta aatcaaccca aactaataaa caaccatagc
     2881 taagctgaca acccaaccaa tcaatttaaa tataaaacta caaattaaat caacccaagc
     2941 taactaaact tcaaactagt taatcaaaca aaccaatgaa tataacctaa ctgattaaat
     3001 taaataaatt aataaactaa tcaagcaatg actaataaag tatttaaaac caacaaaagc
     3061 ataaatcaat taaactaatg attgaatata aaaataataa gttgtagata agtaaaagca
     3121 ttatacaaag cattctaagc tgattaaata caattagaac aaaagcataa atcaatccaa
     3181 gccaattaaa cataaacata aaagaacaat gaatacaaaa acatatttaa ttagcataaa
     3241 aacaaattca atcaataaaa aaataattaa tacaataata gatttaataa acataaaaaa
     3301 ataattaaat ataaaaacaa cgattgacat ataaaaacta agattttaaa tctataagaa
     3361 taagataaag aagaattaac aagtccgcaa tgagctactt tccccctgcc agtaaggcgt
     3421 agtatcatca cccacgatgc gcttagcttc ttggttcggg atggagcaag gcgtttccac
     3481 atctgtataa tcacggacat tgttatttaa atattctttg aaagatttaa cttaagaata
     3541 aagcttttat tttttattct attgttttat ttttttgctt ttcttctatt cttttttatt
     3601 tttctttttt tgttttttaa tttttacttt tatcttttaa atcttatctt tcatcttatc
     3661 aatgaatcaa atctttactc tctttgataa gtttttattt tagaatactt aaaaaacaat
     3721 gttaagagca agttctaata taaaccctac ttgcaagatt tctatatcac tttaaatcaa
     3781 tattaccatt taaagcttta gtaaaaacct taacaaggaa gtgatgcttt attaaagata
     3841 agccaaacgc tctattagta ctggtcagct aaaggacttt catccattac acacccagcc
     3901 tatcaaacta gtagtcttct agagagctta gagaagattc atcttagagt tggcttcacg
     3961 cttagatgct ttcagcgttt atcctttcca aacttagcta cgctgcgatg ctcttggcag
     4021 aacaacagct acaccagtgg tttgttcaac ccggtcctct cgtactaggg tcaaatctct
     4081 tcaatcttct tacgcccacg gcagataggg accgaactgt ctcacgacgt tctgaaccca
     4141 gctcgcgtac cgctttaaat ggcgaacagc catacccttg ggacctgctc cagccccagg
     4201 atgcgatgag ccgacatcga ggtgccaaac ctccccgtcg atgtgagctc ttgggggaga
     4261 tcagcctgtt atccccgggg taccttttat cctttgagcg atggcccttc cacacagaac
     4321 caccggatca ctaagaccga ctttcgtctc tgcttgactt gtatgtcttg cagttaagct
     4381 ggcttatacc tttatactct acgaacgatt tccaaccgtt ctgagccaac ctttgtaagc
     4441 ctccgttatt atttgggagg cgaccgcccc agtcaaacta cccaccagac attgtcccac
     4501 ttgaggataa ctcaagctgg ttagctaccc aaataagaaa gagtggtatc tcaacaatgg
     4561 ctcatataca actggcgtca tatactcaaa gcctcccacc tatcctgcac attcttatcc
     4621 aaatagcagt gtcaagctgt agtaaaggtc cacggggtct ttccgtcttg ccgcgggtag
     4681 gaggaatttt cacctccact acaatttcac tggatccctc tttgagacag ctcccatctc
     4741 gttacgccat tcatgcaggt cggtatttaa ccgacaagga atttcgctac cttaggaccg
     4801 ttatagttac ggccgccgtt tactcgggct tcgatcaaga gcttcgctaa tgctaacccc
     4861 atcaattaac cttcgagcac cgggcaggcg tcacacccta tacatcctct tacgagttag
     4921 cagagtgctg tgtttttggt aaacagtcgg gagggactct ttgttgtaag tttcttcgct
     4981 ttcggagtaa atcctaatac gaagcgaacc acaccttata ccgaagatac ggtgctattt
     5041 tgcagagttc cttaaagaga gttcttccac gcgccttaga atactcatcc cacccacctg
     5101 tgtcggttta cggtacgggc aacattagct aaact
//
LOCUS       DAQUWA010000098         5064 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.098, whole genome shotgun sequence.
ACCESSION   DAQUWA010000098 DAQUWA010000000
VERSION     DAQUWA010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.098"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..1849
                     /locus_tag="R8X70_001741"
     CDS             <1..1849
                     /locus_tag="R8X70_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HEF2929491.1"
                     /translation="ETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKPAKRKTYER
                     KDFDLFYADDFFVKNYNTIIQKFLIEIYPKTQSFPFTVKLRSNSNLTHLKASINLTEN
                     FKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSIKEIELEIA
                     KGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIYRILGKEGR
                     NLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHTGYCIANNL
                     KLSQIGLKTTGSFKTNTDENINLEITNFDISDDAIKSGIVNVQASNIKVNGNVGATKL
                     YGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKNVFVENCMG
                     GKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIANNSDTECENLKN
                     LSLKIKSKLDDTISEMQNYYDYLIKNQIKIIKLQKTKNPSAIEMKFSNLYHDIIKKYN
                     HLSISYKKFIKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPNTNTNLELK
                     HHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS"
     gene            complement(1853..3490)
                     /locus_tag="R8X70_001742"
     CDS             complement(1853..3490)
                     /locus_tag="R8X70_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HEF2929492.1"
                     /translation="MMTSFYNGVSGVKTNSFGIDVYANNIANVNTTGFKYSDAQFKDI
                     FYSTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASEGEFDVALQGKGFFGVLGADGN
                     AYYTRNGSFRRDAAGNLVDSYGNFVLGTMNPAFAGVSYSDRVAGLMGDYLNTGTPVNS
                     GFTVNSNDAFNIGTTASQGVIKVPVNMYLPPQVTQNVKWSGSLNTNATTEVVKVDLDP
                     AKFNVQKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGS
                     PYDANKPGSGYSGIYIKEGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAI
                     VGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQAINTAKFKGGFLEQSNVD
                     LSVQLSNLIATQKSFDASSKSITASDQMIQKAINMKR"
     gene            complement(3494..4357)
                     /locus_tag="R8X70_001743"
     CDS             complement(3494..4357)
                     /locus_tag="R8X70_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HEF2929493.1"
                     /translation="MISSSDWNLNTAATTSGATSSGSTSGTTRTDSSSSSGIVSNPNA
                     TLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQK
                     LSDSFSTSMSTSALGAIGKMATVSDNKIKLTGANELIALKMYLPEDSDENGVTLEIYD
                     SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGKYTVKMVYNNKNGEKITANY
                     GTYPIEGVVFKNGVAHAKMAGKEVPFDAISEITDYKLSSSSSTGSGSSGSGSSGDSSG
                     STEDSDEEEKA"
     gene            complement(4411..>5064)
                     /locus_tag="R8X70_001744"
     CDS             complement(4411..>5064)
                     /locus_tag="R8X70_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEF2929494.1"
                     /translation="KNNNKENKDIKQNFFDQKLNFENLNKTQVVQNKENNANFNNNTN
                     KETFTQEQTKTHSENVDKNSLDELNSLVKDLNKATQNNARNITPKETLQYFSQDLKEA
                     VDQYKAPITKLSITLNPNNLGEVEVTLVQRGNNLHINFNSNTNAMNLFIQNQAEFKNS
                     LVNMGFTGLEMNFSDQGKREQNQNQGKNRSGYGFRDALDGKNESEKVNLELVLAKYF"
BASE COUNT         1758 a          881 c          687 g         1738 t
ORIGIN      
        1 agaaactttc aatccttttg aaagtttaaa tcatgaacaa gcaaacacag aacaaattct
       61 tgattttaga gttatagatt ttaaacttct gtgttctagt gtaaaaccag caaaaagaaa
      121 aacttatgaa agaaaggatt ttgacttatt ttatgcagat gatttttttg taaaaaacta
      181 caataccata atacaaaaat ttcttataga aatttaccca aaaacccaaa gttttccttt
      241 tacagtcaaa cttagatcca actccaacct aacccatcta aaagccagta tcaaccttac
      301 agaaaatttt aaatattacc ctaatttaaa atttgatatt ttgcaaaata tctacaaaat
      361 aatgatcaaa caaaaatttt taatcttaag acttgataaa aatttatttg acaagattga
      421 tgattttatc ttatcaatac aaaaaagtcc atctattaaa gaaatagagc ttgaaattgc
      481 caaaggtgta gataagattg aacataaaag tgatgaaatt atttatcata gagatgttaa
      541 cgaagaatgt tttgacgaaa atattaacta tgatgaagga aactactgta aacctattga
      601 aaaaaatgag ctactttttg aatacattta tagaattctt ggaaaagaag gacgaaattt
      661 aagaggagag atacttcatt taaatccaat agcctttctt gataatcctt ttatcataaa
      721 agatgaaagc atttacacag aagaattaga agatagaatt aaatatttta gcgccaatta
      781 tggattttta aacaaagatc atacaggata ttgtatcgca aataatttaa aattatcaca
      841 aatagggctt aaaacaaccg gttcattcaa aacaaatacc gatgaaaata taaacttaga
      901 aatcactaat tttgatataa gtgatgatgc tattaaatca ggtattgtaa atgttcaagc
      961 ttcaaatata aaagtaaatg ggaatgttgg agcaacaaaa ctttatggaa aaaatatcag
     1021 tatcaaaggc ttaactcatg caaaaagcga aatttttgca caagatattt ttattacaac
     1081 acacaaagga actttgcaag ctgacactgt atatataaaa aatttagaaa atgggacaat
     1141 tatagctaaa aatgtatttg ttgaaaactg catgggtgga aaaatagaag cagaaaatat
     1201 ttatatttgc aatttactaa cggataatac tttatatcca agaaaaaatc taatcataac
     1261 aaacaatata aaatttaaaa acaatatcgt agtttcacca ctagtttcta ttgcaaacaa
     1321 ctcagataca gaatgcgaaa atcttaaaaa tctaagcctt aaaataaaaa gtaagcttga
     1381 tgacaccata agcgaaatgc aaaattacta tgattatcta atcaaaaatc aaatcaaaat
     1441 catcaaactt caaaagacta aaaatcctag cgccatagaa atgaaatttt caaatcttta
     1501 tcacgatatc ataaaaaaat acaatcatct tagcatttcg tataaaaaat ttataaaatt
     1561 aaaatatcaa attgatgcga aattaaattt cttaaatgaa atggtttaca atgtaaaaat
     1621 atacataaaa gccgaaaata tcggagagga taatttttta aaattttatc ctaacacaaa
     1681 caccaacctt gaactaaaac atcatataaa tttaaaagac tatgaaaagg ttttatatct
     1741 tgaaaaagga cagcaagtaa gttatattaa atcaagccat aattatagcg aaagcgacat
     1801 agaagaaatt aaaattattt ttgaaaaatt agaaaaagat aattcctaag aattatcttt
     1861 tcatattaat ggctttttgt atcatctgat cacttgcagt gatacttttt gagcttgcat
     1921 caaaggattt ttgcgttgct ataagattgg ataattgaac acttaaatcc acattggatt
     1981 gctctaaaaa tccaccctta aatttagctg tattgatcgc ttgtccatct ttcatgataa
     2041 agctagcatc tccgctattg gctgttgctg caaaaatatt atctcccata gcaaccaatc
     2101 cttgctcatt gataaaatta tataaagcaa gctttccaac tatggcattt ttgccattgc
     2161 taaattgcgc aactatactt ccatcatcgg atatattata ttgttcaaaa aacccttcag
     2221 ctacaccatc ttgttgtgta actacatttt tttcgacgcc ttctttaata taaatcccac
     2281 tataacccga accaggcttg ttagcatcat aaggagaacc taaatcaata ttaattgttc
     2341 caccatttgg atttgcaatg cttgtaatat tgttttgaag caaagcacca tttttatcaa
     2401 aaaccatatt tccttcagtc ggattgccta cggcattgcc attagaatca taaatttgtg
     2461 caatagcttt atattgtata ttatcgcctt cttgcggtaa aactctttca agtgtaaccc
     2521 ttaaagtgct tttacttcca tctgcattat aaatagggga ttctaaaata tctttattgg
     2581 ctttttgttg ctctgttgaa atttgagctg tatcaagctt gatgctattt tcatccaatc
     2641 cttttaaatc aagctcgtta cttttaaaat ttagattttc atctaaagtc gcttcaaagc
     2701 ttgtttttac gccattatca tcagtgaaat ttaaaataat cctatcaccc gctttagcac
     2761 taaacacatc ttctttgcta acactaccac taactacata tttgccatct tcagtctttt
     2821 ggacattaaa tttcgcagga tcaagatcga ctttaaccac ttctgttgtt gcattcgtat
     2881 ttaaacttcc actccatttt acattttgag ttacttgcgg aggcaaatac atattcacag
     2941 gaactttaat cactccttgt gaagccgttg tccctatgtt aaaagcgtca tttgaattta
     3001 cggtaaagcc actatttaca ggggttcctg tattaagata atcccccata agccccgcga
     3061 ctctatcact ataactcact ccagcaaaag caggattcat agttcctaaa acaaaatttc
     3121 cataagaatc taccaaattt ccagcagcat ctcttctaaa tgatccattt ctagtatagt
     3181 aagcattgcc atcagcaccc aaaacaccaa aaaatccttt tccttgcaaa gccacatcaa
     3241 attcaccctc acttgctaca ggtgaacctt gttcaaaaac gacttgagaa gaagccgcac
     3301 cacttccata gcctccttgg gcagggttag tggattgggt tgttatggtg ctataaaaaa
     3361 tgtctttaaa ttgcgcatct gagtatttaa agcctgtggt attgacattt gcgatattgt
     3421 tcgcataaac atctatacca aagctattgg ttttaactcc tgaaacgcca ttataaaatg
     3481 aagtcatcat ggcttaagcc ttttcttctt catcgctatc ttctgtagat cctgaagaat
     3541 ctccgcttga accacttcct gaactaccgc ttcccgtgct agaagaagag cttaatttat
     3601 aatcagtgat ttctgatata gcatcaaaag gaacttcttt tccagccatt tttgcatggg
     3661 caacaccatt tttaaaaaca acaccttcga taggataagt tccgtaattt gcagtgattt
     3721 tttcaccatt tttattatta taaaccattt taacagtgta cttaccatca cctgcataaa
     3781 ccccatcgtt atttcttcct ggccactcca tagtaaataa accttgagaa atagatttag
     3841 catcgctttt ttcactgaaa acaagtttat tattgctatc ataaatttct agcgtaacac
     3901 cgttttcatc agaatcttca ggcaaataca tttttagtgc aataagctca tttgcacctg
     3961 taagtttgat tttattatct gaaacagttg ccattttacc aatagcccct aaagctgaag
     4021 tactcatact tgtactaaaa gaatcagaaa gcttttgcat agtttcaacc attttttgca
     4081 tagttgtgtt ggtattttgc tgcatttcaa gtgcgctaag ctgtgaagtt tgagtaagca
     4141 ttttatcgct atccatagga tcggttggat cttgatgttg aagctctatc aaaagaagtt
     4201 ttaaaaacgc atccttatct aaggtagcgt ttggattgct cactattcct gagctactgc
     4261 ttgaatctgt tctagttgtt ccactagtac ttcctgaaga agtagcacct gaagttgtag
     4321 cagcggtatt taaattccaa tccgatgatg atatcattat aaactccttt ttatttagtt
     4381 ttttattatt taagcaataa gtgttccaac ttaaaaatac ttcgctaaaa caagctctag
     4441 attgactttt tcactttcat tttttccatc taaagcatct ctaaaaccat atccactacg
     4501 attttttcct tgattttgat tttgctctct tttaccttga tcactaaaat tcatttcaag
     4561 cccagtaaat cccatattta caagagaatt tttaaactcg gcttgatttt ggataaacaa
     4621 attcattgca ttggtattgg aattaaaatt gatatgaagg ttattacctc tttgtaccaa
     4681 agttacctcc acttctccaa gattattagg attgagcgtg atactaagtt tagtaatagg
     4741 cgctttgtat tgatccacag cctcttttaa atcttgtgaa aaatactgca aagtttcttt
     4801 aggagtgata ttgcgagcat tgttttgtgt tgctttattt aaatctttga ctaaagaatt
     4861 taactcatct aagctatttt tatctacatt ttcactgtgc gtttttgttt gctcttgagt
     4921 aaaagtttct ttattagtat tgttattaaa atttgcatta ttctccttgt tttgaactac
     4981 ttgagtttta tttaaatttt caaaatttaa tttttgatca aagaaatttt gttttatatc
     5041 tttattttct ttgttgttgt tttt
//
LOCUS       DAQUWA010000099         4892 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.099, whole genome shotgun sequence.
ACCESSION   DAQUWA010000099 DAQUWA010000000
VERSION     DAQUWA010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4892
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.099"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..126)
                     /locus_tag="R8X70_001745"
     CDS             complement(<1..126)
                     /locus_tag="R8X70_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2929495.1"
                     /translation="MISKTFMPMFLISRLYFTLKEEKLDIQIRKILKEKDELAEEK"
     gene            complement(388..822)
                     /locus_tag="R8X70_001746"
     CDS             complement(388..822)
                     /locus_tag="R8X70_001746"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929496.1"
                     /translation="MKKLALALGGIALGACGEKIYKGIKNTWDKLIFKDLITLRKVIK
                     QYEEIEQIYPSYLNDPKFLEFRKTHKYDAEAIHNIKDHLFSDLKKEKLIQIGTTMEAF
                     MEYSDKYLQDDITALKISWRFCAIRLKFDSALLQLQDINKIV"
     gene            complement(819..1034)
                     /locus_tag="R8X70_001747"
     CDS             complement(819..1034)
                     /locus_tag="R8X70_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929497.1"
                     /translation="MIIVGILGLIISTAVLLTCGVFWVLFGIVFWGVILAFMLLDLSG
                     SYGMVALYILFIVLNLVLIYKIIRRKK"
     gene            1348..2655
                     /locus_tag="R8X70_001748"
                     /pseudo
     CDS             1348..2655
                     /locus_tag="R8X70_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783442.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            2702..4333
                     /locus_tag="R8X70_001749"
     CDS             2702..4333
                     /locus_tag="R8X70_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HEF2929498.1"
                     /translation="MPFILELLKQNKFKFISFLIFSFISSAVGVLTLVFINDYLLKNT
                     QNIPILYFIALLIVFFLSSTIVELGLSVFGQNFIFKMQRRVVKQILDTPLLKVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILILCTSAYLCYLSPQIFTLCAIWIIVVFT
                     INNFLMMKVYAYFRKARENDDALQNNYQNILDGHKELLINRYRAKLYYEDEFESNARS
                     KKKNSTLGNLFNNLSSNFTNVALLALVGVEFYLALEFKWASVAEATTIALSILFLRTP
                     LVSMIGSFPTLLLAKIALDKIAKLELDDYKEHFEKTNFIKDWRQISFKNTSFSYDDNF
                     HLNPVNLDLKKGELIFLIGKNGSGKSTFCMLLTGLFKPSEGEIFVDDMKIDDDNLDVY
                     RSLVSAVFSDFHLFTKTLAKEKFADEEKIASWLEFLELKGKTRVEDHELVLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTIFAITHDDAY
                     FDSADRIFLAEGGNISELKGENIKELAKNLVEKFD"
     gene            complement(4355..4777)
                     /gene="cgb"
                     /locus_tag="R8X70_001750"
     CDS             complement(4355..4777)
                     /gene="cgb"
                     /locus_tag="R8X70_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HEF2929499.1"
                     /translation="MTQEQIQIIKDCVPILQKNGEDLTKEFYKIMFNDYPEVKPMFNM
                     EKQASGEQPKALAMAILMAAKNIENLENMRSFVDKIAITHVNLGVKEEHYPIVGACLL
                     KAIKNLLNPDEATLKAWEIAYGKIAEFYIDIEKKLYEK"
BASE COUNT         1515 a          655 c          765 g         1957 t
ORIGIN      
        1 tttttcctct gccaactcat ctttttcctt gagtattttg cgaatttgta tatctagttt
       61 ttcttctttt aaggtaaaat acaacctaga aataagaaac ataggcataa aggttttaga
      121 aatcacccct gctctttttt cttttatatc tttactgcta caaaagttga tataagctaa
      181 taagcgaatt tgtatatctt taagcctttc tttatctgtt tcttctagtt taaattcttc
      241 gaaatcacgg taatttaaag cattttttgc ttcaaaatct tttttaaaat ttacaaattc
      301 ttcatcatta aaatagcttg aaaattgagt atttaaaaat tcaaattctt tgtaaatttc
      361 ttttaaattt tcttgcattt taactcttta tactatcttg tttatatctt gtaactgcaa
      421 caaagcacta tcaaatttta atcttatagc gcaaaatctc cagctgattt ttaatgccgt
      481 tatatcatct tgaagatatt tatcgctata ttccataaaa gcttccattg tagtgcctat
      541 ttgaataagc ttttcttttt ttagatcgct aaataaatga tcttttatat tatgaatagc
      601 ttctgcatcg tatttgtggg tttttctaaa ttctaaaaat ttaggatcgt ttaaatagct
      661 aggataaatt tgctctattt cttcgtattg cttgatgact tttctaagtg tgatgagatc
      721 tttaaaaatc aatttatccc aagtattttt aatgccttta tagatttttt caccacaagc
      781 acctagtgcg attccaccta aagctaaagc taattttttc atttctttct ccttatgatt
      841 ttgtaaatta aaactaaatt aagcactata aaaagtatat aaagtgccac cataccataa
      901 cttccactta aatccaaaag cataaaagct aaaatcactc cccaaaacac aatcccaaat
      961 aaaacccaaa atactccaca agttaacaaa accgctgtac taatgataag tcctaaaatc
     1021 cctacaataa tcatcatttt taccttgcta aaatattgtt attttttact atagataaaa
     1081 atatagtttt ttgtcttgta aaaagtattt ggggttttta aagctcgggt ttgcattttt
     1141 ttccttgatt ttaatttcaa aaaaaagtat aaagtattct tatgacagct tgtgtcgttt
     1201 ttttgaaaaa ttattaaaaa ttttgcttaa gctgattttt atgattttta tcatcaaaat
     1261 gagttaaatt aaattgaaaa ggattgtttg ttttataaat atttgtagta taatggttat
     1321 ttttaaaatt ctttaaggta taaaataatg aaaaaatcaa aactaggtac aaaagaattt
     1381 aaaattttag gactttcgtc gctaggtgga actttagaat tttatgattt tatcatcttt
     1441 gtattttttg ctgaatatat cgcaaaagta ttttttccta aagatatgag tgaattttgg
     1501 actttgttaa atacttatgg agcttttgct gcaggttatt tagcgcgccc tttaggtggt
     1561 atagtgatgg cgcattttgg tgataaattt gggcgtaaaa atatgtttat gttaagtatt
     1621 ttgcttatgg tgcttcctac ttttacatta gcctttatac ctggttatga aactcttggt
     1681 tttttagcgc cgtttttgct tatacttata agaatttttc aaggtattgc tataggcgga
     1741 gaattacctg gtgcttgggt ttttgtaaga gaacattgta aagaaaatca aaaggctttt
     1801 tctttgagtt gtttaaattc ggctatggct ttgggaattt tactaggaag tatggtattt
     1861 ttactgatca atgctttttt tagcaccgaa gaaatcgcag cttatgcatg gcgtatcgct
     1921 ttttttgtgg gtggaatttt tgggattatt tctatttatt tgcgtagatt tttacaagaa
     1981 actcctattt ttaaataaat gcaaaaagaa cggagtttga gtgcttttcc acttaaggat
     2041 ttgtttaaag aaaaaaatat tttcaaaaat atgctcgcat ctatctttat aacttgggtt
     2101 ttaacaggtt gtgttgtagt gcttatctta ctgatgccta aatttatgcc aagtattttg
     2161 ggtttgagtg cgattgaagg aagttattta caagttttag gaattttagg tataacacta
     2221 ggtggagtgt ttatgggcta tcttgtggat aaattaggtt tgtttaaaat ttgcattttc
     2281 ttttctttag tttttgcatt tttttcttgc ttgtattttt atgctttata tgatcttaaa
     2341 aatcttgtct taacctgtat tttatataca agtgtttgtt ttttaggtgg gattaatgtc
     2401 tttgctccta ttttaatgag tgaagttttt agagctaaaa taagattttc aggaatttcc
     2461 ttttcgtata atatcgctta tgctatcgca ggaggggtta ctcctcagct tattttttgg
     2521 ctcaatactc ttgctactag aggcgaaaat ccatttttat atggaatgag tatatatatg
     2581 atttttctag ctttattggc tatttgtgct gtttttcttg taaaggataa aataaatttt
     2641 gataatcgct cttaaaatgc tataattaat ttttttaatt atactttcgg agtttttatc
     2701 aatgcctttt attttagaat tgcttaaaca aaataaattt aaattcatct cttttttgat
     2761 tttttctttt atttcaagtg ctgtaggggt tttaacccta gtctttatca atgattattt
     2821 acttaaaaat acacaaaata ttcctatttt atactttatc gctttgctta tagtattttt
     2881 tcttagctct accatagtag agttaggatt aagtgttttt ggtcaaaatt tcatttttaa
     2941 gatgcaaaga cgcgtggtaa aacagatctt agatactcct ttgttaaaag ttgcaaaagt
     3001 gggcaaggca agaattctag cttctttagg aagtgatgtg agaaatatat cttttggact
     3061 tttaaggtta cctgatttct tacaatcaag catattgata ctttgtacta gcgcttattt
     3121 gtgttatctt tcacctcaaa tttttaccct ttgtgcgatt tggattattg tggtttttac
     3181 tattaataat tttttgatga tgaaagttta tgcgtatttt cgtaaagcaa gagaaaatga
     3241 tgatgccttg caaaataatt atcaaaatat attagatggc cataaagagc ttttaatcaa
     3301 tcgctaccgt gctaagcttt attatgagga tgaatttgaa agcaatgcaa gatctaaaaa
     3361 gaaaaatagt accctaggca atctttttaa taatctttca tccaatttta ccaatgtagc
     3421 acttctagct ttagtagggg tggaatttta tttggcctta gaatttaaat gggcgagtgt
     3481 agctgaagcg acaacgatag cattgtcaat tttattttta agaacccctt tggtttcgat
     3541 gataggatct tttcctactt tgcttttggc aaaaatcgct ctagataaga tagcaaaact
     3601 agaacttgat gactataaag agcattttga aaaaaccaat tttatcaagg attggcgtca
     3661 aatttctttt aaaaatacga gtttttctta tgatgataat tttcatctaa atcctgtaaa
     3721 tttggatctt aaaaagggag aattgatatt tttaatagga aaaaacggaa gcgggaaatc
     3781 tactttttgt atgcttttaa caggtctttt taagccaagc gagggtgaaa tttttgtaga
     3841 tgatatgaaa attgatgatg ataatttaga tgtttataga tctttagtat cggctgtgtt
     3901 tagtgatttt catctcttta ctaagacttt agctaaagag aaatttgcag atgaagaaaa
     3961 aatcgcttct tggcttgaat ttttagagct taagggtaaa actagagtag aagatcacga
     4021 acttgtatta accaagcttt ctacaggaca aaaaaagcgt ttggcaatgc tcatagcctt
     4081 gcttgaagaa agagatattt tagtgcttga tgaatgggcg gcagatcaag atccagtttt
     4141 tagaagattt ttttacaaaa aacttttacc tttgctaaaa gaacagggta agacgatttt
     4201 tgcaatcact cacgatgatg cgtattttga tagtgcagat agaatctttt tggccgaggg
     4261 aggaaatatc agcgaattaa agggtgaaaa tattaaagaa ttggctaaaa atttagtaga
     4321 gaaatttgat taaaagcccg aaaatgggct tttattattt ttcgtaaagc tttttttcta
     4381 tatctatata aaattcagcg atttttccat aagcaatttc ccaagcttta agtgttgctt
     4441 catcagggtt taaaagattt ttaatagcct ttaaaaggca agctcctact ataggataat
     4501 gctcttcttt aacccctaaa tttacatgag ttatggcaat tttatccaca aatgatctca
     4561 tattttctaa attttctata tttttagctg ccattaaaat tgccatagct aaggcttttg
     4621 gttgttctcc agatgcttgt ttttccatat taaacatagg ttttacttca ggatagtcat
     4681 taaacattat tttataaaat tcttttgtta aatcttctcc atttttttgt aaaataggca
     4741 cacaatcttt gataatttga atttgttctt gtgtcatagt tttcctttta gttcttaatt
     4801 tttttaaaat agagcgtatt ctaactttta atctaaataa aaaaattgac tttggttaaa
     4861 tttatgctca aaaatataaa tttaaaatta tc
//
LOCUS       DAQUWA010000100         4877 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.100, whole genome shotgun sequence.
ACCESSION   DAQUWA010000100 DAQUWA010000000
VERSION     DAQUWA010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4877
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.100"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..643
                     /locus_tag="R8X70_001751"
     CDS             <1..643
                     /locus_tag="R8X70_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929500.1"
                     /translation="FYAKFYLKNLDHQQKFEKPISFSNLIQFNESVEEFKFDFCEINN
                     HTISSFYNKNIIYFDDDNQTLKMHSQGKANNLNIDLTSQIYQSIDFDQINFDLIYSQK
                     KPDISDDKLIFKPSNEELNLQIQNITLKKDNQDINIKGNIFLSMQSHKAHIQISSLKS
                     PDEIFTWGQFFGGLNQYFIKNEEGMFIMDLHYDSDAKTQLKINGNEFTDINLN"
     gene            643..1824
                     /locus_tag="R8X70_001752"
     CDS             643..1824
                     /locus_tag="R8X70_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEF2929501.1"
                     /translation="MSLALNFRPKTLDEILGQQELVEVFKKFISMQKLPHSLFFGPAG
                     CGKTTFARVVAKDFGLDFYEFDGGNFKLEDLRKIIENYKNSLYKPLIFIDEIHRLSKT
                     QQEMLLIPMENYRCIVIGASTENPYFVLSSGVRSRSMLFEFKNLGQKDLELLLERVQQ
                     KIAFKIEDNAKEFLLKSFDARAMLNLLEFALVLNEKEITLENLKKLRNGVNSEGVSSK
                     DTHYILASALIKSLRGSDVDAAIYYLARLIDAGESADFIARRLIIFASEDISNADPNA
                     LNLAVSTLTAVKNIGYPEARIILSQCAVYLASAPKSNSSYNAINKALDYVKNNPALEI
                     PNYLNNNHPEKKNYLYPHNFGGWVKQNYLSANLKFYESKGIGEEARLLENLSKLKNIK
                     S"
     gene            1894..2622
                     /locus_tag="R8X70_001753"
     CDS             1894..2622
                     /locus_tag="R8X70_001753"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEF2929502.1"
                     /translation="MINIGIYGAKGRMGKQIEECLKSETKAKAAALFDKGDNLEEFFE
                     KSDVIIDFSSPNGTHELLNYARTMPKPLVIGTTGLDEKTLHLMQNASEVMPVFYATNM
                     SLGVAVLNHLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQGVTKARNLDLEK
                     VRISGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEEGEFLELNHTATSRATFAKG
                     AIKIAIWLNAQKPKMYSINDFLGI"
     gene            2624..3961
                     /locus_tag="R8X70_001754"
     CDS             2624..3961
                     /locus_tag="R8X70_001754"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEF2929503.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKTIKT
                     IKAKGEVNQIFNPENLKTLEGEIAIGHNRYSTAGNSSLNDAQPVAATSVLGDIALAHN
                     GNLVNKEKVRSKLIEDGAIFQTNMDTENVVHLIARSKKESLKDRFIESLQECIGAYCF
                     VLASKDKLYVVRDPYGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMIIF
                     TQGNDKFESIELFKQEPRICAFEYIYFARPDSIIEGKSVYEIRKKMGEALAKKFTHSA
                     DFVVPVPDSGVSAAIGFSQYLKIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     HKVLKDKEIVVVDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNLEEVREYVEADSLSFLSIEELTQSIGDERRYSLISFDGDYFIK"
     gene            complement(3965..4777)
                     /locus_tag="R8X70_001755"
     CDS             complement(3965..4777)
                     /locus_tag="R8X70_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEF2929504.1"
                     /translation="MILTFILLALALALLSFKKIKLSFVVLVISGFLAYYHNIIEISF
                     IVFVGVFFLLSLYYKNNKNVFLELLIVAFCLLLFLHFIPGVNNVKILDKVHASEHSSA
                     FTLYFSFDKPLGVFLLFLLMPSLFENLNRIKPKLFQAALLFASPFLLLSIPWYLGVIK
                     MEIGFPSWIVYFLFSNLFLVALVEEAFFRGYLQQRLQGLIGGVGALLVASLAFGVAHY
                     KAGILMIIFASLAGLIYGMAWRYSKSLWLSVFFHYGLNLTHLFFFTYPSYVK"
BASE COUNT         1885 a          752 c          789 g         1451 t
ORIGIN      
        1 attttatgca aaattctatc taaaaaacct agaccatcaa caaaaatttg aaaaacctat
       61 atcgttttct aatttaatac aatttaacga aagtgtagaa gagtttaaat ttgatttttg
      121 cgaaatcaat aatcatacaa tctcttcatt ttataataaa aatatcattt attttgatga
      181 tgataatcaa accttgaaaa tgcattctca aggcaaagca aataatctaa atatagattt
      241 aacttctcaa atttatcaaa gtattgattt tgatcaaatc aattttgatc tcatttatag
      301 tcaaaaaaaa cctgatattt ctgatgataa attgattttt aaaccttcca atgaagaatt
      361 aaacttacaa atacaaaata tcactttaaa aaaagataat caagatataa acatcaaagg
      421 aaatatcttt ttatcaatgc aaagtcataa agctcatatt caaatttcta gtttaaaatc
      481 gcccgatgaa atctttactt gggggcaatt ttttggaggt ttaaatcaat actttataaa
      541 aaatgaagag ggtatgttta tcatggatct tcattatgat agtgatgcta aaactcagct
      601 taaaatcaat ggcaatgaat ttacggatat aaatttaaac tgatgagttt agctttaaat
      661 tttcgtccca aaaccctaga tgaaattcta ggccaacaag aacttgtaga agtatttaaa
      721 aaatttatca gtatgcaaaa acttccgcat agtttatttt ttggacctgc aggatgtgga
      781 aaaacaacct ttgctagagt tgtagctaag gattttgggc ttgattttta tgaatttgat
      841 ggtggaaatt tcaaacttga ggatttaaga aaaatcatag aaaattacaa aaacagcctt
      901 tataaacctc ttatttttat cgatgaaatt catcgcttga gtaaaactca acaagaaatg
      961 cttttaattc ctatggaaaa ttatcgctgc attgttatag gtgcaagtac tgaaaatcct
     1021 tattttgttt taagttcagg cgttagaagt cgctctatgc tttttgaatt taaaaatctt
     1081 gggcaaaaag atttagaact tttattagag cgagtgcaac aaaaaatagc atttaaaata
     1141 gaagataatg ctaaagaatt tttactaaaa agcttcgatg ctagagcaat gttaaattta
     1201 cttgaatttg ctttggtttt aaatgaaaaa gaaatcactt tagaaaattt aaaaaaactt
     1261 cgcaacggag taaatagcga gggtgtaagc tcaaaagata ctcattatat tttagcaagc
     1321 gctctcatta aaagtttgcg aggaagcgat gtggatgctg ctatttatta tcttgctcgt
     1381 ttaattgatg caggagaaag tgctgatttt atcgctaggc gtttgattat ctttgcaagt
     1441 gaagatatat ccaatgctga tcctaatgcc ttaaatttag ccgtttctac tcttaccgca
     1501 gtaaaaaata tcggctatcc tgaagcaaga attatacttt ctcaatgcgc tgtctatcta
     1561 gcaagtgctc caaaatcaaa ttcaagctat aatgctataa acaaggcctt agattatgta
     1621 aaaaacaatc ctgcacttga aatccccaat tatttaaaca ataatcatcc tgaaaagaaa
     1681 aattaccttt atccgcacaa ttttggcgga tgggtgaagc aaaactacct gagtgcaaat
     1741 ttaaaattct atgaaagcaa gggcatagga gaagaagcga gattgcttga aaatttaagc
     1801 aaattaaaaa acatcaagtc ctgatttctt ataaaaaatt tacaaaataa atgttaaaat
     1861 gcaattttat ctttaaggaa aaaataagac acaatgataa acataggaat ttatggcgct
     1921 aaagggcgca tgggcaaaca gatcgaagaa tgtttaaaaa gtgaaactaa agcaaaagca
     1981 gctgcacttt ttgataaggg tgataattta gaagaatttt ttgaaaaaag tgatgttatc
     2041 atcgacttct catctccaaa tggcactcac gaactcttaa attacgcaag aacaatgcca
     2101 aaacctttag taattggcac aacagggctg gatgaaaaaa ccctgcattt aatgcaaaat
     2161 gcaagcgaag taatgcctgt tttttatgcg actaatatgt ctttaggggt tgcagtttta
     2221 aaccatctgg ctagcaaagc aagccaaatg ttaagaaatt ttgatataga aattttagaa
     2281 atgcaccatc gtcacaaaaa agacgctcca agtggtactg ctatgacttt agcacaaggt
     2341 gtaacaaaag ctagaaattt agatcttgaa aaagtaagaa tcagcggaag agatggtatc
     2401 ataggcgaaa gaagcaaaga tgaaattgcc gtgatgagtc taagaggtgg agatattgta
     2461 ggacgccaca ctgtgggctt ttatgaagag ggtgaatttt tagaattaaa ccataccgca
     2521 acttcaagag caacttttgc taaaggagcg attaaaatcg ctatttggct taatgcacaa
     2581 aagccaaaaa tgtactcaat taatgatttt ttaggaattt aaaatgtgtg cagtagtagg
     2641 agttataaat tcaaaaaatg caagtactta tgcttactat gctctttttg ccatgcaaca
     2701 ccgaggacaa gaagcaagcg ggattagtgt aagcaatggt aaaactatca aaactatcaa
     2761 agccaaaggc gaagtaaatc aaatttttaa ccctgagaat ctaaaaaccc tagaaggtga
     2821 aatcgccata ggacacaatc gctattctac cgcgggaaat tcaagcttaa atgatgccca
     2881 acccgtagct gcgacttcag tcttagggga tattgcttta gcacacaatg gaaatttagt
     2941 caacaaagaa aaagtaagat caaaactcat cgaagatgga gctatctttc aaaccaatat
     3001 ggatactgaa aatgtcgttc atctcatagc aagaagtaaa aaagaaagct taaaagatag
     3061 atttatcgaa agtttgcaag aatgcatagg ggcttattgt tttgttttag caagtaaaga
     3121 caagctctat gttgtaagag atccttatgg ggtgcgtcct ttatctttag ggcgcttaaa
     3181 agatggaggc tatatcgtag caagcgaaac ttgcgctttt gatcttatag aagcagaatt
     3241 tatacgcgat gttaaacctg gagaaatgat tattttcact caaggaaatg ataaatttga
     3301 aagcatagaa ctttttaaac aagagcctag aatttgtgct tttgaatata tttattttgc
     3361 tagacctgat agcattatag aaggaaaaag cgtgtatgag atacgcaaaa aaatgggcga
     3421 agctttggca aagaaattta ctcatagtgc tgattttgta gtgcctgttc cagatagtgg
     3481 cgtaagtgct gccataggct tttcacaata tttaaaaatt ccacttgaaa tggctatagt
     3541 tagaaaccat tatgtaggta gaacctttat cgaacctact caagagctta gaaatttaaa
     3601 agttaaatta aaattaaatc ctatgcataa agttctaaaa gataaagaaa ttgtcgtagt
     3661 agatgatagt ttagtgcgtg ggacaacttc taaaaaaatc atttccctac ttcgtgccgc
     3721 aggtgcaagt aaaattcact tggccatagc ttgccctgaa attaaatttc cagatactta
     3781 tgggatcgat actccaacct ttgaagaact cattagcgct aataaaaatt tagaagaagt
     3841 acgcgaatat gtggaagcag attcacttag ctttttaagt atcgaagaat taactcaaag
     3901 cataggggat gagagaagat attctttaat tagctttgat ggagattatt ttatcaaata
     3961 atctctattt tacataagag ggataagtaa agaaaaacaa atgtgttaaa tttaaaccat
     4021 aatgaaaaaa tacactaagc cacaaactct tgctatatct ccaagccatt ccataaatca
     4081 aacctgccaa agaagcaaag attatcatta aaatacctgc tttataatgc gccactccaa
     4141 atgccaaact tgcaaccaaa agtgctccta caccccctat caaaccttgt aatctttgtt
     4201 gtaaataacc cctaaaaaat gcttcttcaa ccaaagcaac caaaaataaa ttagaaaata
     4261 aaaaatacac tatccaagaa ggaaagccta tttccatttt aattacaccc aaataccaag
     4321 ggatagataa aagtaaaaaa ggacttgcaa acaataacgc tgcttgaaat aattttggtt
     4381 ttattctatt taaattctca aacaaacttg gcataagcaa aaagagtaaa aaaacaccca
     4441 aaggcttatc aaaactaaaa tacaaagtaa aagcgctact atgctcactt gcatgaactt
     4501 tatctagaat ttttacatta ttaacacctg gaataaaatg caaaaataaa agcaagcaaa
     4561 atgccactat caaaagctct aaaaatacat ttttattatt tttataatac aaggacaata
     4621 aaaaaaatac acccacaaaa acaataaaac ttatttctat gatattatga taataagcca
     4681 aaaatccact gattaccaat actacaaaag ataattttat ttttttaaat gagagcaagg
     4741 ccaaagctaa ggctaataag ataaaagtta agatcatatt ttatttctct tttttaattt
     4801 catcaaattt cagaaaatag tactacttaa tgaattaaat gtatataaaa atacttcaca
     4861 aaaaacacat ttaaaat
//
LOCUS       DAQUWA010000101         4873 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.101, whole genome shotgun sequence.
ACCESSION   DAQUWA010000101 DAQUWA010000000
VERSION     DAQUWA010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4873)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4873)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4873
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.101"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            156..1823
                     /locus_tag="R8X70_001756"
     CDS             156..1823
                     /locus_tag="R8X70_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEF2929505.1"
                     /translation="MWQQIYDPFNSIWLSALFAFLPILCFLACLVFFKLKGYQAGFLT
                     VVLASVIALFVYDMPWNLVGASFVQGFTNGMWPIAWIIIAAIFLYKLSIKSGSFEIIK
                     KSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAAGLCLI
                     ANTAPVAFGAVGIPIIAMANLVGVEAHSVSAMVGRMLVPLSLTIPFFIVFLMDGLKGV
                     KETFPAILVAALSFTATQFWSSNHLGAELPDIISAIVSLAVTTIFLKFWKPKNIFRLD
                     GETHFSEDNTLNFGDVLKAWTPFILLIVCIIIWTQPWFKAIFDKDGFLSYTSISLQFS
                     NLTSGILSPSITGIGEAKPLSLGLGIDLINGKSVAQAGTAILLAAFLTIAILRIKAED
                     AAECFWATLKEMAIPCLTIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFAFFSPIIGW
                     IGVFLTGSDTSANLLFGTLQQVSAQKLGVSEALFLAANSVGGVVGKMISPQSIAIACA
                     AVGLVGKESDLFKFTLKYSIAFIILIGIWTCIIAFFLQGIIPEVVAK"
     gene            1976..2713
                     /locus_tag="R8X70_001757"
     CDS             1976..2713
                     /locus_tag="R8X70_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEF2929506.1"
                     /translation="MKKVYFYATCLGTAAMQESVLNGIKLLRREGVEVIFKKNQTCCA
                     QPSFNSGYFNESREIALYNVDLFDKDYPIVVPSGSCAGMMSHDYKELFKDRPEFSRVK
                     DFSSRVIELSQYLDEVLNVNYEDKGEPIKVTWHSNCHALRVQKSIQASKNLIRKLKNV
                     ELVELQYEEECCGFGGTFSVKEPEISNAMVRNKIKDIQNTGVKYLISGDGGCLLNIDG
                     TMRRMGLDVKGIHLYEFLFKRLEGERL"
     gene            2710..4149
                     /locus_tag="R8X70_001758"
     CDS             2710..4149
                     /locus_tag="R8X70_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEF2929507.1"
                     /translation="MSQKIPHEEIVHIKLNDIQMRENLMTAMHTLQKNRLGVIDARFR
                     DWQGLRAKAKQAKNNALMSLKDRLLEFEKNATKNGIQVHWASSDKDACEIVYEIMREK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGQIFKDKLGAKLENDEPESLNAIARDHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGVEKVMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRTKMLAHKDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GENPPMGAKNIHHNAMEAFAFKQFKKAATKGERWRFALSKAHYFNWFVQNLSGALPVI
                     KKWYAFKELPQIKKDLYKEIQAIEGVIYE"
     gene            4142..4798
                     /locus_tag="R8X70_001759"
     CDS             4142..4798
                     /locus_tag="R8X70_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEF2929508.1"
                     /translation="MSKINEISNKSKEKILSALNEAYEAKDFTYQASIDPVEHIQTKE
                     DALAEMKQKMSDNKYIVENATKETLEEKINEIITKYNYKKMIYGTDLGLDLNKIQAEE
                     KICFDKEIENLRYEVFHSDFSIVHARAGVSSHGVALIPSSKGQPRMLSLAPKLCIVLL
                     KKEDIVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIVIY
                     "
BASE COUNT         1654 a          708 c          919 g         1592 t
ORIGIN      
        1 atttttatat actctatatg ttaccaaatt gcacaaaatg atacataaga agccttatga
       61 tttttcttaa attttaattt cattatatat attttaagaa tttgttagaa tgaagagaaa
      121 ctttaaataa aataaaacaa aggagaagac acattatgtg gcaacaaatt tatgatccgt
      181 ttaatagcat ttggctcagt gccttatttg cttttttacc tattctttgc tttttagctt
      241 gtttggtatt tttcaagtta aaaggttatc aagcgggttt tttaaccgtg gttttggcaa
      301 gcgttatagc tttatttgtt tatgatatgc cttggaattt agtaggtgct agttttgtac
      361 aaggctttac aaatggtatg tggcctatag cttggattat tatcgcggct atttttcttt
      421 acaaactctc tatcaaatca ggttcttttg aaatcattaa aaaaagcgtg atgagcatca
      481 ctcctgatca cagaattcaa gtgattttga taggtttttg ttttggttct ttcttagaag
      541 gtgctatagg ttttggtggt ccagtagcta tcacagcagc tcttttggtg ggacttggtt
      601 tgcgtccttt acaagcagca ggactttgtc ttatagccaa taccgcacct gttgcttttg
      661 gtgctgtggg gattcctatt atcgctatgg caaatttagt aggagttgaa gctcattctg
      721 tttctgctat ggtgggtaga atgcttgttc cacttagtct tactatacct ttttttatag
      781 tatttttaat ggatggttta aaaggggtaa aagaaacttt ccctgctatt ttagttgccg
      841 cattaagctt tacagcaacg caattttgga gctcaaatca cttaggcgct gaacttcctg
      901 atattatttc agctattgtg tctttagcag ttacaactat ctttttaaaa ttttggaaac
      961 caaaaaatat ttttagacta gatggagaaa ctcattttag cgaagataat accctaaatt
     1021 ttggtgatgt gttaaaagct tggacacctt ttattttact tatagtttgt attatcattt
     1081 ggactcagcc ttggtttaaa gctatctttg ataaagatgg ttttttaagc tatacaagca
     1141 ttagcttgca atttagcaat cttacaagcg gtattttaag tccttctatc acaggtatag
     1201 gcgaagctaa acctctttct ttaggacttg gaatcgatct tatcaatggt aaaagtgtag
     1261 ctcaagcagg aactgcgatt ttacttgcag cttttttaac catagctatt ttaagaataa
     1321 aagctgaaga tgctgctgaa tgtttttggg caaccctaaa agaaatggct atcccttgtc
     1381 ttactatagg tttggttgta gcctttgctt ttatctctaa aaatagtggt atgagtacta
     1441 ctttaggact tgcttttgct catacaggag atgcttttgc attcttttcg cctattatag
     1501 gttggattgg agttttccta acaggatcag atacaagtgc taacttactt tttggaacct
     1561 tgcagcaagt aagtgcgcaa aaactaggcg ttagtgaagc tttattctta gcagcaaact
     1621 ctgtaggtgg agtagtagga aaaatgatca gccctcaaag tatagctatt gcttgcgcag
     1681 ccgttggact tgtaggcaaa gaatctgatc ttttcaaatt cacactcaaa tattctatag
     1741 cttttatcat tttaatagga atttggactt gcattatcgc attcttttta caaggaatca
     1801 ttccagaggt agtagccaaa taaaaacaaa cttgcaagat ttattcttgc aagtttaagc
     1861 aagttttaaa tgaaaaaatt ttgaaaatat ttttatcatt gatttaattt tgattttatt
     1921 tttctaaagt tagaataatt gtttatatta aatctcttaa aatgaaggag aagaaatgaa
     1981 aaaggtgtat ttttacgcca catgcttagg aactgctgcc atgcaagaaa gcgttcttaa
     2041 tggtattaaa cttttacgcc gagaaggagt ggaagttatt tttaaaaaaa accaaacctg
     2101 ttgtgctcaa ccctctttta attcaggata ttttaatgaa agtcgcgaaa tagccttata
     2161 caatgtagat ttatttgaca aagattatcc tatcgttgta cctagtggat cttgtgcggg
     2221 tatgatgagt catgattata aagagctttt taaggataga cctgaatttt ctagagtaaa
     2281 agattttagc tcacgtgtta tagaactttc acaatatctt gatgaagttt taaatgtaaa
     2341 ttatgaagat aaaggagaac ctattaaagt gacttggcat tctaattgcc atgctttaag
     2401 agttcaaaaa agtatacaag caagtaaaaa tctcattaga aaacttaaaa atgttgaact
     2461 tgtagaatta caatatgaag aagaatgttg cggttttggg ggaacttttt ctgtaaaaga
     2521 acctgaaatt tcaaatgcta tggtaagaaa taagattaaa gatatacaaa ataccggagt
     2581 aaaatacctc atcagtggag atggtggctg tcttttaaat atagatggaa ctatgcgcag
     2641 aatgggttta gatgttaaag gcatacactt gtatgaattt ttatttaagc gtttggaagg
     2701 agagagatta tgagtcaaaa aattccacac gaagaaattg ttcatattaa attaaacgac
     2761 attcaaatgc gtgaaaattt gatgactgct atgcatactt tgcaaaaaaa tagacttggg
     2821 gtcattgatg caagatttag ggattggcaa ggattaagag ccaaagcaaa acaagctaaa
     2881 aacaatgcct taatgagcct aaaagatagg cttttagaat ttgaaaaaaa cgctacaaaa
     2941 aatggcatac aagtgcattg ggcaagtagc gataaggatg cttgtgaaat agtctatgaa
     3001 atcatgcgtg aaaaaaatat caccaagctt ttaaaaggca agtcaatggc gagtgaggag
     3061 ataggattaa atcattattt agaaaaaaaa ggtttaaaag ccatagaaac cgatcttgga
     3121 gagcttattt tacaactcaa tgaagaaccg cctttgcata tagttgtccc tgctattcat
     3181 agaaatcgcc acgaaatagg tcaaattttt aaagataaac ttggtgcaaa attagaaaat
     3241 gacgaacctg aaagcttaaa tgccatagca agagatcatt taagaaaaga ctttgaaggc
     3301 ttaaaattag gacttagtgg tgtaaatttt gccatgtcaa gagagggggc tttttggctt
     3361 atagaaaatg agggaaatgg tagaatgtgt accacagcac ccgatattca catcgcactt
     3421 tgtggtgtag aaaaagttat ggaaagcttt gaagatgcag caactatggt ttctttactt
     3481 actccttcag ccacaggaca atttatacct acttataaca acattatcac aggcccgcga
     3541 aaaaatgggg atttagatgg cccaaaagaa gtgcatgtga ttttatttga tcacaataga
     3601 accaaaatgc tagctcataa agattattat gaggctttgc gttgtattcg atgtggggct
     3661 tgtatgaatt tttgccctgt ttatgatcaa atcggcggac acgcatacca aaccacctat
     3721 ccaggaccta ttggtgaagt aatcagtcca aatatttttg gtatagatca cacaggtgat
     3781 attttaaatt tctgttcgct ttgtggacgc tgttcagaag tttgtccggt gcaaattcct
     3841 ttagctgatc tgattagaaa actaagatgc gataagatag gacaaggaga aaatccacct
     3901 atgggtgcaa aaaatatcca tcataatgca atggaagcct ttgcatttaa gcaattcaaa
     3961 aaagcagcaa caaaaggtga aagatggcgt tttgcacttt caaaagcgca ttattttaat
     4021 tggtttgtgc aaaacttatc aggagcttta ccagtgatta aaaaatggta tgcttttaaa
     4081 gaattacctc aaatcaaaaa agatctatat aaagaaattc aggctataga aggagtaatt
     4141 tatgagtaaa atcaatgaaa tttctaacaa aagcaaagaa aaaattttat cagcactcaa
     4201 tgaagcttat gaagcaaaag attttactta tcaagccagt atagatcctg tagagcatat
     4261 tcaaacaaaa gaagatgcct tagctgaaat gaagcaaaaa atgagcgata ataaatacat
     4321 tgttgaaaac gctactaaag aaactttgga agaaaaaatc aatgaaatta tcacaaaata
     4381 taattacaaa aaaatgatat atggcactga tttaggctta gatttaaaca aaattcaagc
     4441 cgaagaaaaa atttgctttg ataaggaaat tgaaaattta cgatatgaag tttttcatag
     4501 cgatttttct atagttcatg caagagctgg agtaagctct catggcgttg ctttgatacc
     4561 ttcaagcaag ggacaaccta gaatgctaag tcttgcacct aagctttgta tagtgttatt
     4621 aaaaaaagaa gacatagtaa aaagccttag cgaagcttta aatttggtaa aaaaagaaaa
     4681 tgaaatttta cctacaaata ttttatttat cgcaggtcct tcaagaacag cagatataga
     4741 attaatcact gtttttggcg ttcatgggcc tcaaattgct catattgtta tttattaaaa
     4801 agttttagct ctagtgttat ttactagagc taaaaccagc ttaagttaaa taaatattat
     4861 acgagataga tta
//
LOCUS       DAQUWA010000102         4783 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.102, whole genome shotgun sequence.
ACCESSION   DAQUWA010000102 DAQUWA010000000
VERSION     DAQUWA010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4783
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.102"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            25..717
                     /locus_tag="R8X70_001760"
     CDS             25..717
                     /locus_tag="R8X70_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEF2929509.1"
                     /translation="MKTIGIIGGMSFESTITYYKTINETINNQLGNLNSAKILLYNVN
                     FEEIANLQKNGEWEKAAQILGECAKKLELGGADFILIATNTMHKIFDQIQKNIKIPLI
                     HIAQSTAKILKQQNIHTIGLLGTQYTMMEDFYKNALKKENINTITPNQSDMQELSDII
                     FNELCKGQMKENSKEKYLKIIQKLKDEGAQGIVLGCTEIGLLISQEDTNIPIFDTALI
                     HALDAVNLALKD"
     gene            complement(714..914)
                     /locus_tag="R8X70_001761"
     CDS             complement(714..914)
                     /locus_tag="R8X70_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HEF2929510.1"
                     /translation="MGKLERIIRIILALVIFSVGVYYASWWALIGFIPLLTGIFGVCP
                     IRVWTGKQACPLGVCPISKKKD"
     gene            1046..1669
                     /locus_tag="R8X70_001762"
     CDS             1046..1669
                     /locus_tag="R8X70_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEF2929511.1"
                     /translation="MDKEKILKEYFKNYNLENKDFEAMVEKSYFKEFDKNTILDDCLG
                     FVIVLKGGFRAFILGQNAKEITVFKLKQNEECVICSHCIFETISYNLTLESFEDTQIL
                     IVPVKIYSQLKDKYPLIANYTLNLIAKRFNSLINILEQALFTPLHHRVKMLLKENAKE
                     GKITFTHEEIALHLGSTREVISRILKTMQKEGFIQQNRKEITLLKDL"
     gene            complement(1869..2993)
                     /gene="cydB"
                     /locus_tag="R8X70_001763"
     CDS             complement(1869..2993)
                     /gene="cydB"
                     /locus_tag="R8X70_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEF2929512.1"
                     /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSSD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQ
                     AVAYEYRKKENNVYGSKTYEVFLKINGYLGVFLIGVAISSFFSGSHFVLNEHNFVSWQ
                     NSLRGLELLFNPFNYLLGIALVFLSRILGAAYFMNNIKDENIKAKAVRKLSINSILFL
                     PFFLGFLAWIFIKEGFGVDEKGIVSMTENVYLYNFLDNILFAILFIVGVVFVLLGMVQ
                     GSKGCSKTIFTLGFGSVLAVFALFLSIGLGSSAFYPSLSDLQSSLTIRNASSSYYTLS
                     VMAYVSLLVPFVLAYIIYVWNAMDRVKITREEMKDSEHLY"
     gene            complement(2993..4555)
                     /locus_tag="R8X70_001764"
     CDS             complement(2993..4555)
                     /locus_tag="R8X70_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEF2929513.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFIIAIMETIYVK
                     TGNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKKFHLISTWCVAIGSNLSAFWILVANGWMQYPVGMQ
                     FNPDTARNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFILKGRHIIEA
                     KKSLVVGASFGLVCSVFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIHGNEDRGIEPMQERID
                     KGKIAIQALKDYKLAKDNNDTAAMATHKSILEANFKDFGYGYLEKPTDAIPPVALTFY
                     SFHIMVALGSLFFLLFIATLYLTMANDIEKFRKILWLCLLCIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLMPVHIAATELGKVNVQISFWIFAVLFTALLIAEVKIMLTQIKKGFDAH
                     AGHTPLMGKGEK"
     gene            complement(4555..4755)
                     /locus_tag="R8X70_001765"
     CDS             complement(4555..4755)
                     /locus_tag="R8X70_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018713472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HEF2929514.1"
                     /translation="MRIFNFYKEGFKNLTLGKTLWKIIFIKLFIMLIVLKLFVFDVNF
                     NSIFKNDNEKSNFVIENLIKEK"
BASE COUNT         1892 a          881 c          627 g         1383 t
ORIGIN      
        1 tataaaaatt ttaaggagat agaagtgaaa acgataggca ttataggtgg aatgagtttt
       61 gaaagtacca taacctacta taaaactata aacgaaacca ttaataatca actaggcaat
      121 ttaaattctg caaaaatttt actctataat gtcaattttg aagaaatagc aaatttgcaa
      181 aaaaatggcg agtgggaaaa agctgcgcaa attttaggag aatgtgctaa aaaattagaa
      241 cttggtggag ctgattttat acttattgcc accaacacca tgcataaaat ttttgatcaa
      301 attcaaaaaa atataaaaat tcctctcatt catattgctc aaagcacagc caaaattcta
      361 aagcaacaaa acatacacac cataggctta ctaggcaccc aatatactat gatggaagat
      421 ttttataaaa atgcattaaa aaaagaaaat ataaatacaa tcaccccaaa tcaaagcgat
      481 atgcaagaac taagcgacat catctttaat gaactttgca aaggacaaat gaaagaaaat
      541 tctaaagaaa aatacttaaa aatcatccaa aaactaaagg acgaaggtgc tcaaggtata
      601 gttttaggct gcacagaaat tggattgttg atttcccaag aagatacaaa tatcccaatt
      661 ttcgatacag ccttaattca cgcccttgat gccgtaaatt tagctttaaa agattaatct
      721 ttctttttag agataggaca aactcccaaa ggacaagctt gctttcctgt ccaaaccctt
      781 atagggcaca caccaaaaat acctgtaagc aaaggaataa atcctatcaa agcccaccaa
      841 gacgcataat aaacccctac actaaagata accaatgcta ggattattct tattattctt
      901 tctagtttac ccatttcttc tccttttgta taatttaatc aaagtataaa caaaaaaaat
      961 tttcttgtca gtgataaaag tcactaaaaa aataattaat ctaaaaaaga tacaataaaa
     1021 attaaattca caaaggtagt ctatcttgga taaggaaaaa attttaaaag aatattttaa
     1081 aaactataat cttgaaaaca aagactttga agctatggtg gaaaaatcat actttaaaga
     1141 atttgacaaa aatacaattt tagatgattg tttaggattt gtgatagttt taaaaggagg
     1201 atttcgtgca tttattttag gtcaaaacgc caaagaaatc accgttttta aactgaaaca
     1261 aaatgaagaa tgtgtcattt gttctcattg tatctttgaa actatatctt acaatctcac
     1321 cctagaaagc tttgaagata ctcaaatttt aattgttcct gtaaaaatat attctcaact
     1381 aaaagataaa tatcctttaa tagcaaacta tactcttaat cttattgcca aacgctttaa
     1441 ttctttgatt aatattttag agcaagctct tttcacccct cttcatcata gggttaaaat
     1501 gcttcttaaa gaaaacgcaa aagaaggaaa aatcactttt acacatgaag aaatagcctt
     1561 acatttaggc agtactagag aagttatttc acgaatttta aaaacaatgc aaaaggaagg
     1621 ttttattcag caaaatcgta aagagattac acttttgaaa gatttatgat aaaaatgccc
     1681 atataaatat gggcaaaatt gcaatatttt gaaaagattt aatcctaaat cggttaaatc
     1741 tttaagaact ttatagctta ttgtcttttt ctaattgatt gatattaagc atgataaatt
     1801 tatagcttac ataaatcacc aaaggccaaa ccaataaaaa caaagcgtgt agcatttttt
     1861 ctccttgatt aatataaatg ttcgctgtct ttcatttctt cacgagtgat ttttactcta
     1921 tccattgcat tccaaacata aataatataa gctaaaacaa aaggcacaag caaagataca
     1981 taagccatta cactaagagt ataataactc gaactcgcat tgcgtatagt taaagaactt
     2041 tgcaaatcac taagtgaagg ataaaaagcg cttgatccaa gtcctatgct taaaaataaa
     2101 gcaaaaacag ccaaaaccga tccaaaacct aaagtaaaaa tcgttttaga acatcctttt
     2161 gaaccttgta ccatacccaa aagcacaaat acaactccaa cgataaataa aatagcaaaa
     2221 agaatattat ctaaaaaatt gtataaatat acattttcag tcatactcac aatgcccttt
     2281 tcgtccactc caaaaccctc tttaataaaa atccacgcaa gaaatcctaa gaaaaaaggc
     2341 aaaaataaaa tactgtttat actcagtttt ctaacggctt ttgctttgat attttcatct
     2401 ttgatattat tcataaaata agcagcaccc aaaattctag ataaaaacac caaagcaata
     2461 cccaaaagat aattaaaagg attaaacaaa agttccaaac cgcgtaaaga attttgccaa
     2521 gaaacaaaat tatgctcatt taatacaaaa tgcgatccac taaaaaaact gcttattgca
     2581 accccgatta aaaacactcc taaataacca ttgattttaa gaaaaacttc ataggtttta
     2641 gagccataaa cattgttttc ttttttacga tactcataag caacggcttg taaaataaag
     2701 caaaataaaa tacaaagcca agcccaataa gccccaccaa aacttgtgct ataaaaaagc
     2761 ggaaaagcag caaaagcagc accgccaaaa agcacaagag tagtaaaacc aagctcccat
     2821 ttacgaccta gtgagtttac aagcattgtt ttttcaagtt cgtcagaact taattcatca
     2881 attaaagttt gacccccttg aacaaaaaac ataaaaacta aaagtccacc aagtaaactt
     2941 aaaatcaacc accaataaat ttgtaacccc tcaagttcta aaccaaaaaa cattattttt
     3001 ctcctttgcc cataagtgga gtatgtcctg catgtgcgtc aaaacctttt ttaatctgag
     3061 taagcatgat tttaacttct gcaatcaata aggctgtaaa aagtactgca aaaatccaaa
     3121 atgaaatttg aacattgact ttgccaagtt cggttgctgc tatatgaaca ggcattaaat
     3181 cttgtatagc ccaaggttgc ctacctactt cagccactat ccatcctgcc tctgctgcga
     3241 tatatcctaa aggaatacac aataaacaaa gccaaagaat ttttctaaat ttctcaatat
     3301 catttgccat agtaagataa agcgttgcga taaaaagtaa gaaaaataag cttccaagag
     3361 ctaccatgat atgaaaacta taaaaagtta aagccacagg tgggatagca tctgttggtt
     3421 tttctaaata accataacca aaatctttaa aatttgcctc taaaatactt ttgtgagttg
     3481 ccatggctgc tgtatcgtta ttatctttag ctaatttata atcttttaaa gcctgtatag
     3541 cgatttttcc tttatcgatg cgttcttgca taggctctat gcctctatct tcgtttccgt
     3601 gtattaaatc ctcaatgcct ggcacaaaag aattaggatc acgatttcct aatatagata
     3661 aagcataagg tatagtaata tcaaataaaa acacactttc gttattatct atagtttttt
     3721 taggatttaa aattccaaaa ggaacaagtc ctgcacggtg ctcaccttga taaacccctt
     3781 ccatagccgc aagtttcata ggttgcgttt gggtaacacg ataagcactc tcatctccgc
     3841 taaaaaataa gaaaaccgaa caaacaagcc caaaactagc acccacaact aaacttttct
     3901 tagcttcgat aatatgacgc ccttttaata taaaccaagc cgaaattccc atcacaaata
     3961 aagcagaaat cacataacca ctgcctatgg tatgtaaaaa tttagagatc gctacaggag
     4021 aaagtgcaac ttcaaaaaag ctttgcattt catttcttgc tgtatcggga ttaaattgca
     4081 ttcccacagg gtattgcatc cagccatttg caaccaaaat ccaaaatgct gataaattac
     4141 tgcctatagc cacacaccaa gttgaaataa gatggaattt cttagaaact ttatcccagc
     4201 caaaaaacat aacagcaaaa aaagtagcct ctaagaaaaa ggccattata ccttcaactg
     4261 ccaaaggagc accaaaaata tcacccacaa accagctata atttgcccag ttggttccaa
     4321 attcaaactc cataataatg cccgtagcta cgccgatagc aaaattgata gcaaataaag
     4381 aaagccagaa tttagtgatt tttttccatc tttcattgcc tgtttttaca taaatggttt
     4441 ccataatagc aatgataaaa gataagccca aagtcaaagg cacaaataaa aaatgataaa
     4501 gcgcggttaa tgcaaactgc gctcttgacc aatccacact gctaagttcg ttcattattt
     4561 ctccttaata agattttcta tgacaaaatt acttttttca ttatcatttt taaaaataga
     4621 attgaaattt acgtcaaaaa caaaaagttt aagcacaata agcattataa aaagttttat
     4681 aaaaataatt ttccataaag tttttccaag ggtaaggttt ttaaaccctt ctttataaaa
     4741 gttaaaaatt cgcacaaaaa agaaataaaa acattttaga tac
//
LOCUS       DAQUWA010000103         4574 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.103, whole genome shotgun sequence.
ACCESSION   DAQUWA010000103 DAQUWA010000000
VERSION     DAQUWA010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.103"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            72..3581
                     /locus_tag="R8X70_001766"
     CDS             72..3581
                     /locus_tag="R8X70_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HEF2929515.1"
                     /translation="MQKNSFLKIYGLIPFLLVAFINAFVDLGHKIIIQNTIYKVYEGS
                     TQLLLTAIVNALILLPFILMLSPSGFLADKYPKNLIMKLSAVFSVMLTIIICISYYNG
                     AFWTAFTLTFIMGIQAALYSPSKYGFIKELVGKDLLAMGNGAVNAVSIVAILAGMSLF
                     SLSFESLYDINHNSSEEVLKQVAPLGFLLILFSLIELYLAWRLPKLKDEIKELKFDSK
                     RYLSGKLLISNLKLIFGNKVIWLCIVGISIFWAISQLYLVSFPVFSKNELFIENTFFV
                     QVSLGFSGIGVVLGSLIAGRFSKNYIELGLIPFGALGVFLMALIMPYFTSLITYSFIF
                     FIFGFCGALFIIPLNSLIQFHAKENELGKILAGNNFIQNIAMLTFLVLATLFANLEIN
                     VIYLFYFITLVAFLGAIYVVFKLPFSLVRMLLSIAFLGRYRLLVEGFKNIPEKGGALL
                     LGNHISFIDWAIVQMAIPRKIYFVMERSIYSKWYIKIFLDKFGVIPVSSAASKASLEL
                     IAERIKQGDLVCLFPEGMLSRHGQLNEFKGGFEHVCSNLEEDDGVILPFYIRGLWGST
                     FSRSDEELSARNRTLSKRNIAIAFGAPMSLHSKKEEVKAKVFELSFMAWKSQCEAMHT
                     IARAFITSAKRNLSNIAIIDSLAGAISYRKLLSLSFILSTLIKENSKKINSNFERGSY
                     APKEECVGILLPASFASSLLNLSVLLAQKVVVNLNFTAGEKALQAAVKSAQISQIYTS
                     KKFLEKLESKGVSLNFSEEVNLIYMEDVVEIFKKQKSKILAMMMAVSILPSFILKAIF
                     APSKNNLAIAAILFSSGSEGTPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPF
                     HAFGLTVTTFLPLLESIKSITFADPTDALGIAKAVAKNNVTIMCGTSTFLGIYARNKK
                     LDAIMFESLRVVVSGAEKLKSEVRSAFEMKFKKSIFEGYGATETTPVASVNLPNRFDA
                     DYWIVHRASKEGSVGMPLPGTAVRIVDPNTYETLKTNEDGLILIGGHQVMVGYLNNKE
                     KTDEVIKEIDGIRWYNTGDKGHLDEDGFLYIVDRYSRFAKIGGEMISLGALEEEIAKF
                     IDTNIVKFCTVALEDEKKGEQVALLIECDEEFFEGVCEAIKSSSMPAIFKPSRYLKVE
                     KIPLLGSGKVDLKGAKELAKSLV"
     gene            complement(3660..4571)
                     /locus_tag="R8X70_001767"
     CDS             complement(3660..4571)
                     /locus_tag="R8X70_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HEF2929516.1"
                     /translation="MFIFSPLFTIFILLAGGYFAKRVGILKQKQARTFLDFAIVFALP
                     CLIFDKAYHLNFDFSLVVLIFIGFFSCALAAFIVVFLGFIFNFSKATLVSMFLLSCFG
                     NTIFVGMPIVEGIFANAQFGAEVILYDALATTLPISLLGPFILSLGSGEKVSLVANIK
                     KILSFPPFLALLLGFLCKLISLPEFIFSPIRLFGGAATPVALFAIGLGLGFMAIKTAY
                     KPTILVILAKMVLAPLIFVLLLKLFGFEMKASIIVAIIESATPTMTLAGAMVMKAKLD
                     SNLAVSTVAFGVLFAFISMPILVWALA"
BASE COUNT         1563 a          725 c          801 g         1485 t
ORIGIN      
        1 ttattgttag aattttatga taaaatcaat gccactttta taaagttttc ataaatttag
       61 gagtaaatta tatgcaaaaa aattcttttt taaaaatcta tgggctcata ccctttttgc
      121 ttgtagcttt catcaatgct tttgtagatt tagggcataa aatcatcatt caaaatacta
      181 tttataaggt ttatgaaggt agcacacagc ttcttttaac agccattgtt aatgctctta
      241 tccttctacc ttttatttta atgctttcac cctcaggatt tttagcagac aaatatccaa
      301 aaaatcttat catgaaactc tcagcagttt ttagcgttat gcttacgatt atcatttgta
      361 taagctatta taatggggct ttttggacag cttttacact tactttcatc atgggaattc
      421 aagctgcact ttattctcct agcaaatacg gctttattaa agaattagtc ggaaaagatt
      481 tacttgcgat gggaaatggt gcagttaatg cagtaagcat cgtggctata ctagctggaa
      541 tgagtctttt ttctttaagt tttgaaagct tatatgatat aaatcataac agctcagaag
      601 aggttttaaa gcaagttgca cctttgggat ttttacttat acttttttca ctcatagagc
      661 tttacttagc gtggcgttta cctaaactta aagatgagat aaaagaatta aaatttgatt
      721 ctaaacgcta tttgagcgga aaattgttga taagcaattt aaaacttatt tttggaaata
      781 aagtaatttg gctttgtatc gttggaattt cgatattttg ggcgatatcg caattatatc
      841 ttgtaagttt tcccgtattt agtaaaaatg aactttttat tgaaaatact ttttttgtac
      901 aagtttcttt aggattttca gggattggag tcgttttagg ctctttaata gcgggtaggt
      961 tttctaaaaa ttatatcgag cttggactca ttccttttgg ggctttgggc gtgtttttaa
     1021 tggccttgat tatgccctat tttacaagtt tgattacata tagttttatc ttttttatct
     1081 ttggtttttg cggtgcgtta tttatcatac ctttaaattc tcttatacaa tttcatgcaa
     1141 aagaaaatga actgggtaaa attttagcag gcaataactt catacaaaat atcgccatgc
     1201 ttacttttct tgttttggca actttatttg ccaatttaga aatcaatgta atttatttat
     1261 tttacttcat tacacttgtt gcttttttgg gtgcgattta tgtagtcttt aaactccctt
     1321 tttctttagt aagaatgctt ttaagcatag catttttagg acgctatcgt ttgcttgtgg
     1381 aaggctttaa aaatatccct gaaaaaggcg gtgccttgct tttgggcaat catatttctt
     1441 ttatcgattg ggctatagtg caaatggcaa ttcctagaaa aatttatttt gtcatggagc
     1501 gaagtattta ttctaaatgg tatatcaaaa tttttcttga taaatttggt gtcattcctg
     1561 tttcaagtgc agcaagcaag gctagcttag agcttattgc agagcgtatt aaacaagggg
     1621 atttggtttg tctttttcct gaaggcatgc tttcaagaca tgggcaactc aatgaattta
     1681 aaggtggatt tgaacatgtt tgctcaaatt tagaagaaga tgatggagtg attttacctt
     1741 tttatatacg cggactttgg ggtagcactt tttcaagaag tgatgaggag ctttcagcta
     1801 gaaatcgcac cttaagcaaa agaaatatcg ctatagcctt tggtgctcct atgtctttac
     1861 attctaaaaa agaagaggta aaagctaaag tttttgaact ttcttttatg gcttggaaat
     1921 ctcaatgcga agcaatgcat accatagcaa gagcttttat caccagcgct aaaagaaatc
     1981 ttagtaatat agctataatc gactctttag caggagcgat tagctataga aaattattga
     2041 gtcttagttt tattttaagc acccttataa aagaaaattc aaaaaaaatc aatagcaatt
     2101 ttgaacgcgg atcttatgcg cccaaagaag aatgtgtagg aattttactt cctgcttctt
     2161 ttgctagttc tttgctaaat ttaagtgtct tgcttgcaca aaaagttgta gtaaatttaa
     2221 attttactgc gggagaaaaa gccttacaag cagcagtaaa aagtgctcaa atttcacaaa
     2281 tttatacttc taagaaattc ttagaaaaat tagaaagcaa aggcgtgtct ttaaatttta
     2341 gtgaagaagt aaatcttatc tacatggaag atgtggttga aatctttaaa aaacaaaaaa
     2401 gtaaaatttt agcaatgatg atggcagtta gtattttacc tagctttata ttaaaagcga
     2461 tctttgctcc ttctaaaaac aatcttgcca tagcagctat tctttttagc agtggtagcg
     2521 aaggcactcc aaaaggcgta atgttaaata accgaaatat cctaagcaat atcgctcaaa
     2581 tttcagatgt gctttgcaca agaaacaatg atgtaatact ttcatccttg ccaccttttc
     2641 atgcttttgg gctaactgtt actacatttt tacctttact tgaaagtatt aaaagcatta
     2701 cttttgctga tccaaccgat gctttaggca tagcaaaagc tgtagccaaa aacaatgtta
     2761 cgataatgtg tggaacctcg accttcttag gaatttacgc tagaaataaa aagcttgatg
     2821 ccattatgtt tgaaagctta agagtggttg tttcaggagc tgaaaagctt aaaagcgaag
     2881 ttcgatctgc ctttgaaatg aaatttaaaa agagtatttt tgagggctat ggagcgactg
     2941 aaaccactcc tgttgcaagc gtgaatttgc ctaatcgctt tgatgcggat tattggatag
     3001 ttcaccgcgc aagcaaagaa ggaagtgtgg gcatgcctct acctggaact gcagttcgca
     3061 ttgtcgatcc taatacttac gaaactctaa aaacaaatga agatgggctg atactcatag
     3121 gcggacacca agtcatggtg ggatatctta acaacaaaga aaaaaccgat gaagtcatca
     3181 aagaaatcga tggcataaga tggtataaca ccggcgataa agggcattta gatgaagatg
     3241 gatttttgta tatcgtagat cgttattcgc gttttgcgaa aatcggtgga gagatgatat
     3301 ctttaggtgc tctagaagaa gaaatcgcta aattcatcga tacaaatata gtgaaatttt
     3361 gcaccgtagc tttagaagat gagaaaaaag gcgaacaagt tgccttgctt atagaatgtg
     3421 atgaagaatt ctttgaaggt gtttgcgaag ctataaaaag ctcaagtatg cctgctattt
     3481 tcaagccaag tcgctatcta aaagtagaaa aaattccact tttaggctct ggaaaagtgg
     3541 acttaaaagg cgctaaggaa ttagcaaaaa gcttggttta aaataataaa tttttagcaa
     3601 agagataaat actctttgct tttttaattt tttcttataa ttctttcata tatttaaatt
     3661 tacgccaaag cccaaactaa aattggcata gaaataaaag caaaaagcac tccaaaagcc
     3721 acagtactta cagctagatt gctatctaat ttagccttca ttaccatagc tcctgctaaa
     3781 gtcattgtag gcgtggcact ttctatgatg gcaactatga ttgaagcttt catttcaaaa
     3841 ccaaaaagct ttaataaaag cacaaaaatt aaaggtgcta aaaccatttt agctaaaatc
     3901 acaagaatag taggtttata agcagtttta atcgccataa aaccaagtcc caaacctatg
     3961 gcaaaaagtg ccactggagt agctgcacca ccaaataaac gaatagggga aaaaataaat
     4021 tcaggcaagg atattaattt acacaaaaaa cccaaaagca aagccaaaaa aggtggaaaa
     4081 gaaagaattt ttttaatatt tgctaccaaa cttacttttt caccacttcc caaagaaagg
     4141 ataaaaggcc ccaaaagaga aataggcaaa gtagtagcta aagcatcata tagtattact
     4201 tctgcgccaa attgcgcatt agcaaaaatg ccttcaacga taggcatacc cacaaaaata
     4261 gtatttccaa agcaagagag taaaaacata ctcactagtg ttgcttttga aaaattaaaa
     4321 ataaaaccta aaaatacgac tataaaagca gcaagagcac aactaaaaaa tcctataaat
     4381 atcaaaacaa ccaaagagaa atcaaaattt aaatgataag ctttatcgaa aattaaacaa
     4441 ggcaaagcaa aaacgatagc aaaatctaaa aaggttcttg cttgtttttg ttttaagata
     4501 cccactcttt tagcaaaata cccacctgct agtaagataa aaatcgtaaa caaaggacta
     4561 aaaataaaca tacc
//
LOCUS       DAQUWA010000104         4409 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.104, whole genome shotgun sequence.
ACCESSION   DAQUWA010000104 DAQUWA010000000
VERSION     DAQUWA010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4409
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.104"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..481)
                     /locus_tag="R8X70_001768"
     CDS             complement(<1..481)
                     /locus_tag="R8X70_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929517.1"
                     /translation="MQEKIQILIDLLEINKAQATDIVGRYLKNAKDIHSFLDFYFETL
                     ERENIVGTTYEKLRMVCKRAEIEFKKRFEDKEIFLEWLCNKYKNQACFRLHEGDFEYS
                     YFTSCGNGKKIKINQKSIDILVCVNAFKQISYKNGEPLENNEFKEALLEFIFKNQDRI
                     "
     gene            complement(492..1493)
                     /locus_tag="R8X70_001769"
     CDS             complement(492..1493)
                     /locus_tag="R8X70_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929518.1"
                     /translation="MIPNFIASFDVAIGRKRLRERKGYLKLSNTIAYGGLSVDALALY
                     IQLAKLSEKTIVSEIYLREFIKVKNNQRMSLNRLRIAKKELIELRLLEIKKVRNGSLN
                     FYEWILKDENYQVKKHFNKSLSLLKNSDEKLSKTLKNNASSIDRKLTTENEKKENLHY
                     IETRTHARDNKFINNININNNKFIKKENLENLKNNQEKKERVFNQNASFAVSFLKLDE
                     KECEKMAKKEFKVPNANELMGQIMAFNEKNNTNFGEELANDFIGYWDAREWKRNGKRM
                     SSVAGSLYTWLKYAKENELRKNQRFGRKKEANPSVVDSLMEYYGMKDENKDKLLGCF"
     gene            1536..1901
                     /locus_tag="R8X70_001770"
     CDS             1536..1901
                     /locus_tag="R8X70_001770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929519.1"
                     /translation="MFNSFLSEMLKTATLENLVYFLIGVLFGLSIRPLFLYLTKKQKL
                     KRVCIKDMKLENDLTKRLYPNLGYKLVTKKTPFEMVFKKDKFKYIICPYYRDKKCVLD
                     NDKCKILKSQPKYQPLETV"
     gene            2037..2186
                     /locus_tag="R8X70_001771"
     CDS             2037..2186
                     /locus_tag="R8X70_001771"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929520.1"
                     /translation="MDDKDLNLLKNIPYLMEKIEELENRIKQLEQAAQPKPYSTQTPN
                     YLGEI"
     gene            complement(2183..2371)
                     /locus_tag="R8X70_001772"
     CDS             complement(2183..2371)
                     /locus_tag="R8X70_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004296785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929521.1"
                     /translation="MKMIELKVKMPDEYFELLQSVANDGGFNSINELITDRIAHFLKF
                     EKYYRELGKKDILSLDKT"
     gene            complement(2358..2573)
                     /locus_tag="R8X70_001773"
     CDS             complement(2358..2573)
                     /locus_tag="R8X70_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929522.1"
                     /translation="MNRKKLKKILLSYYSKDGVGSILSSRIGIKVQVAGELWEKHQIP
                     PNIWGKNNRNKLLKFLGEKERIENEND"
     gene            2714..3445
                     /locus_tag="R8X70_001774"
     CDS             2714..3445
                     /locus_tag="R8X70_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HEF2929523.1"
                     /translation="MEKNKTFYKLDKEYLSQILKEKKISRAKFAQMLSENGYEITLDG
                     ITYWYRGENNQPEDYKNIITMAKVLEVPVSKLAPVNDSIKSFLQDDNQINFRYFPDIY
                     ASAGLGTSSQSEEAKIVSVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFIII
                     DRSKNSLGAISNADIVIFRKNDDLFCKKIKKEPFADYIFLVSENKKYEDKKVDNSEFE
                     QCEILGAVVSKMAVETFKNFIEVVG"
     gene            3549..3725
                     /locus_tag="R8X70_001775"
     CDS             3549..3725
                     /locus_tag="R8X70_001775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929524.1"
                     /translation="MTKIQSFWNGFYGKQIKMKLSNYGKFLISLKMHKPQKEKLFQKK
                     DKKNLVVLANKLVS"
     gene            3758..4294
                     /locus_tag="R8X70_001776"
     CDS             3758..4294
                     /locus_tag="R8X70_001776"
                     /inference="COORDINATES: protein motif:HMM:NF024671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4065 domain-containing protein"
                     /protein_id="HEF2929525.1"
                     /translation="MRKMDAASEKRLIEAVSYLKKISKDALMARLYQKILFLLELKYY
                     QQHSRPFIGINFKSYKFGPFSLDVAKALDDPKPNSECSNEVKEKIDEILKEYNLNRFD
                     QKTMGKSFKKMIDYIHSLVFYNLTPFDCDFNFDNYSFEDLFERINSKLDGKKLEDEKY
                     KFALINQKAKEYECLFQI"
BASE COUNT         1620 a          630 c          532 g         1627 t
ORIGIN      
        1 ctattctgtc ttgatttttg aaaataaatt caagtagagc ttctttaaat tcattgtttt
       61 ctaatggttc gccattttta taggagattt gcttaaaagc atttacgcaa actaagatat
      121 caattgattt ttggttaatt ttaatctttt taccatttcc gcagctagta aaatacgaat
      181 attcaaaatc tccttcatgt agtctaaagc aagcttggtt tttatattta ttgcaaagcc
      241 attctaaaaa tatttcttta tcttcaaagc gttttttaaa ctcgatttca gctcttttac
      301 aaaccattct taatttctca taggttgtcc ctacgatatt ctctctttct aaagtttcga
      361 aataaaaatc taaaaaagaa tgaatatctt ttgcattttt taaatatcta cctacaatat
      421 cagttgcctg agccttatta atttccaata agtctattaa aatttgtatt ttttcttgca
      481 ttttttactc cttaaaagca tcctaagagc ttgtctttgt tctcatcttt cattccgtaa
      541 tactccatca ggctatcaac cacactagga ttggcttctt tttttctacc aaaacgctga
      601 ttttttctta gctcgttttc tttagcgtat ttaagccatg tataaagact tcctgccaca
      661 cttgacattc tttttccatt tcttttccat tccctagcat cccaatagcc tataaaatca
      721 ttagccaact cttcaccaaa gtttgtatta tttttctcat taaaagccat tatttgcccc
      781 ataagctcat tagcatttgg gactttaaat tctttttttg ccattttttc acattccttt
      841 tcatcaagtt ttaaaaagct cactgcaaaa gaggcgtttt gattaaaaac gcgttctttc
      901 ttttcttgat tattttttaa attttctaaa ttctcttttt ttataaattt attattatta
      961 atatttatat tatttataaa tttattatcg cgtgcgtgcg tgcgtgtttc tatataatgc
     1021 aaattctctt ttttttcgtt ttcagtggtt aattttctgt cgattgatga agcattattt
     1081 ttaagagttt tgcttagctt ttcatcactg tttttaagca aagataaaga tttgttaaaa
     1141 tgttttttaa cttgataatt ttcatctttt aaaatccact cataaaaatt taaagatcca
     1201 tttctaacct ttttaatttc taaaagccta agctcgatta attctttttt agcaattctt
     1261 aatctattta agctcattct ttgattattt ttaactttta taaactctct tagatagatt
     1321 tcacttacaa tcgttttttc actaagcttt gctaattgaa tatataatgc cagagcatca
     1381 acactaagtc ctccataagc tatagtgttt gataatttca aatagccttt tctctctctc
     1441 aatctttttc gcccgatagc cacatcaaaa cttgctataa aatttggtat caccaactat
     1501 cctttatgtt ataatttaaa ttaaaaaggt tttttatgtt taattctttc ttatccgaaa
     1561 tgctaaaaac cgccacttta gaaaatttag tatatttttt gataggtgtt ttatttggtt
     1621 taagtatccg tcctttgttt ttatatttaa ctaaaaaaca aaaactaaaa agagtttgta
     1681 ttaaagatat gaagctagaa aacgatttga caaaaagact atatcctaac ttaggatata
     1741 aattagttac aaaaaaaact ccttttgaaa tggtttttaa aaaagataaa tttaaataca
     1801 ttatttgtcc ttactaccgt gataaaaaat gcgttttaga taatgataaa tgcaagatat
     1861 taaaatccca gccgaaatac cagccactag aaacagtcta aaatgcaaca tcatcaaagt
     1921 aaaaacaaat aatcctataa tctcaatcaa tctctcaagc atttcattcc ttaatccgtt
     1981 ttaaaaagtc ctttgctata atttttttgc acccaatcaa gaaaggactt atcaaaatgg
     2041 atgacaaaga tttaaacttg ttaaaaaaca tcccttatct tatggaaaaa atcgaagagt
     2101 tagaaaacag gataaaacag ctagaacaag ctgcacaacc taaaccatac tctacccaaa
     2161 ctccaaatta cttaggagaa atctaagtct tatcaaggct tagaatatcc tttttaccta
     2221 gttctctata atatttttca aattttaaaa aatgagcaat cctatccgta ataagctcat
     2281 taatactatt aaatccgcca tcatttgcca cactttgtaa aagttcaaaa tactcatcag
     2341 gcatcttaac ctttagctca atcattttca ttctctatcc tttctttttc tcctaaaaat
     2401 ttaagcaatt tattcctatt atttttaccc caaatattag gtggtatttg atgtttttcc
     2461 caaagttctc cagctacttg aactttaatt cctattctag agcttaaaat acttccaacg
     2521 ccatctttac tataataaga gagtagtatt ttttttaatt tttttctatt catattctta
     2581 caattcctaa aaatattttt aaaaatgtag cataactact ataaaattaa gtttaaaaaa
     2641 tatgtaaata tactacatat atttttttaa atagtcgatg tataattact acaattaata
     2701 aggtggataa aaaatggaaa aaaataaaac attttataag cttgataaag aatatttatc
     2761 acaaatttta aaagaaaaaa aaataagcag agcaaaattt gcacagatgc tttcagaaaa
     2821 tggatatgaa atcactttag atggaataac ttattggtat agaggtgaaa acaatcaacc
     2881 tgaagattac aaaaatatta taactatggc aaaagtttta gaagtaccag ttagtaaact
     2941 tgctccagta aatgatagta taaaatcttt tttacaagat gataatcaaa taaatttcag
     3001 atattttcca gatatttatg caagtgcagg acttggaaca tcatctcaaa gcgaagaagc
     3061 aaaaattgtt tccgttgatg aaaattttct aaaagaaatt ttagatatac ccataaagaa
     3121 gagttatgat attataaaaa ttaatggcga tagcatggaa cctattttat ctaatggaga
     3181 ttttattatt atagatagaa gtaaaaattc acttggggct atttcaaatg cagatattgt
     3241 tatttttaga aaaaatgatg atttattttg caaaaaaatt aaaaaagaac cttttgcaga
     3301 ttatattttt ttagtttctg aaaataaaaa atatgaagat aaaaaagtag ataatagcga
     3361 atttgaacaa tgcgagatct taggtgctgt agtatcaaaa atggctgttg aaacctttaa
     3421 aaattttata gaagtggtgg gatgaatttt aagcaatggt tttattttta tttaaagttt
     3481 ttatttaaca aagtgcagta taatataaaa tattttaggt ttgtttaatt atagagaaag
     3541 aaaacttaat gacaaaaata caatcatttt ggaatggttt ttacggtaag caaattaaga
     3601 tgaaattatc aaattatgga aaatttctaa taagcttaaa gatgcacaag ccacagaaag
     3661 aaaagttatt tcagaaaaaa gataaaaaga atttagttgt tttagcaaat aaattagtat
     3721 cataaagatt atattaattt ccaaaaaagg atatataatg aggaaaatgg atgcagcatc
     3781 ggaaaaaaga ttaattgaag ccgtatctta tcttaaaaag ataagcaaag acgcattaat
     3841 ggcaaggctt tatcaaaaaa tattattttt attagagttg aaatattatc aacaacattc
     3901 aagaccgttt atcggtataa attttaaaag ttataaattt ggacctttta gtcttgatgt
     3961 agcaaaagct ttagatgacc ctaaaccaaa ttcagaatgc tcaaacgaag ttaaagaaaa
     4021 aatagatgaa atattaaaag aatataatct taatagattt gaccaaaaaa caatgggaaa
     4081 atcatttaaa aaaatgattg attatattca ctctttagtg ttttataatc taactccatt
     4141 cgattgtgat tttaactttg ataattattc ttttgaagat ttatttgaga gaattaactc
     4201 aaagctagat ggtaaaaaat tagaagatga gaagtataaa tttgctttaa ttaaccaaaa
     4261 agctaaggaa tacgaatgcc tattccaaat ttagctatta atataataag atttttagta
     4321 tcaacctata aattaaaaaa cgaaacatat gtttatagtg aatttggaaa atatattaga
     4381 gtaacatttt caaaattaaa tgaaaaaag
//
LOCUS       DAQUWA010000105         4286 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.105, whole genome shotgun sequence.
ACCESSION   DAQUWA010000105 DAQUWA010000000
VERSION     DAQUWA010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4286
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.105"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            223..1047
                     /gene="panB"
                     /locus_tag="R8X70_001777"
     CDS             223..1047
                     /gene="panB"
                     /locus_tag="R8X70_001777"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEF2929526.1"
                     /translation="MRKSMISFLEKKAKNEKITMVSAHDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
     gene            1058..1906
                     /locus_tag="R8X70_001778"
     CDS             1058..1906
                     /locus_tag="R8X70_001778"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEF2929527.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEEREASLAISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            1903..2283
                     /locus_tag="R8X70_001779"
     CDS             1903..2283
                     /locus_tag="R8X70_001779"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEF2929528.1"
                     /translation="MNITLLKSKIHRASVTEARLDYVGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEVKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(2394..2852)
                     /locus_tag="R8X70_001780"
     CDS             complement(2394..2852)
                     /locus_tag="R8X70_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEF2929529.1"
                     /translation="MLRKTDIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQ
                     WEEKFKYDEIFVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTY
                     LHNEIYTFASLSAKDFFLKNGFELIRENKVIKEGQNLKKFLMKKDVVYKN"
     gene            complement(2836..3495)
                     /locus_tag="R8X70_001781"
     CDS             complement(2836..3495)
                     /locus_tag="R8X70_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEF2929530.1"
                     /translation="MMNDRFTRIKWLVSEENFNKISQTKVLVCGLGGVGGMCVDALYR
                     SGFQNLTLIDADKFEITNQNRQIHSENLGEEKAKVFARIYNAKGIVSKIDNEFLANFD
                     LSEFDLIIDAIDDIPAKVALANLIDFKRQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKK
                     N"
     gene            complement(3485..4261)
                     /gene="surE"
                     /locus_tag="R8X70_001782"
     CDS             complement(3485..4261)
                     /gene="surE"
                     /locus_tag="R8X70_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEF2929531.1"
                     /translation="MKEILITNDDGFESEGLKKLIKMLKKEFKAKITIVAPATEKSAC
                     SHSITLTKPLRFIKVGKRFYKLDDGTPADCVYLALHALYKTRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDFKNALKITKKIVQNIFDKGFP
                     LGKKEFLNINFPAKSNIKGIKICKAGKRVYNFEAHSNINPRGVEYYWLAAANLDFEDE
                     KDSDIALLKKGYVTITPIMLDLSAYDKMKKVKKWLKANNE"
BASE COUNT         1474 a          684 c          676 g         1452 t
ORIGIN      
        1 tataaatcta acaatatggc taatatatta agacttatat taatcaaaat aaagacttgt
       61 ataaaaattt attattttta gaatttatta gtatttaatt gtaaccatta aagcaatcca
      121 tcgattaaat ataacttact ttatcattca tttactattt atgaaaaatt atatgctagt
      181 tttttgctta ttattttata gctaaaaatt gaggtatgca aaatgagaaa aagtatgatt
      241 agttttttgg aaaaaaaggc caaaaatgaa aaaataacca tggtaagtgc gcatgattat
      301 catagtgcaa gaattttaga caatagcgat atagatatta tattggttgg agattcatta
      361 gccatgacgg tacttggtat gcaagatact ttaagtgtta ctatggatga aatgttgatt
      421 tttaccaaag ctgtttctcg cggagctaaa aagtctttcg tacttgctga tatgcctttt
      481 atgtcttatc aaagttcaga tcgtgacgct atcttaaatg cctcaagatt tatcaaagaa
      541 agccacgcaa atggggtaaa agtggaaggg ggtatagaaa tcgcaagcaa gattaaattg
      601 atttcccaat caggaatacc cgtcgttgct cacctaggtt taaccccaca agctgtaaat
      661 atgctaggtg gctatagggt tcaaggtaaa gatttacaat cggcccaaaa aattatagat
      721 gatgcaaaag ctgtgcaaga tgcgggtgct tgtatgttgg ttttagaatg tgtgcctgta
      781 aaactagcac aaaaaataag ctctatttta gaaattccaa caatcggcat aggttcaggc
      841 aaatactgcg atggacaagt tttagtttat cacgatcttt tgggtttaaa taaagatttt
      901 aaagcaaaat ttgtaaagca ttttgataaa attgatcctc aagtaggagt tgaaaaatat
      961 agagatgaag ttaaaagcgg tatttttcct tcccaagagc acagctttga ttatttagat
     1021 gatgaattat tagataaatt atactaagga tacaaatatg caagtcatta cttctgtcaa
     1081 agaagcaaaa caaattgtaa aagattggaa atcacatcaa cttagtatag gctatgttcc
     1141 aaccatgggt tttttacacg atggacattt aagtttagtc aaacatgcca aaacacaaga
     1201 taaggttata gtaagtatct ttgtaaatcc tatgcaattt gggcctaatg aagatttttc
     1261 tagttatcca agagatttag aacgcgacat taaaatgtgt caagataatg gcgttgatat
     1321 ggtttttatc cccgatgcaa ctcaaatgta tcttaagaat tttagcacct atgtagatat
     1381 gaatacgatc actgataaac tttgcggggc taaaagaccg gggcatttta gaggcgtttg
     1441 cacggtttta actaaatttt ttaatatcct aaaccctgat atagtctata tggggcaaaa
     1501 agacgcgcag caatgcgtag tcgttaggca tatggttgat gatttaaatt ttgatttaaa
     1561 aattcaaatt tgtcctatca ttagagaaga agatggctta gctaaaagct ctagaaatgt
     1621 atatcttagc aaagaagaaa gagaagcgtc actagctata tctcaaagca tttttttggc
     1681 tgaaaaatta gtccgagagg gagaaaaaaa tacttctaag atcatccaag ctatgaaaga
     1741 tattttagaa aaagaaaaac taatcaaaat cgattatata gaattagtcg attttaacac
     1801 catggaaaat atcgaaaata tcactgataa tgttttagga gcggtggctg cttttgttgg
     1861 aaaaacaaga ctcattgata attttttagt acaaggatta aaatgaatat cactttactc
     1921 aaatcaaaaa tacatcgcgc aagcgtaaca gaagctaggc ttgattatgt aggaagtata
     1981 agtatagatg aaaaattatt gcaagcgagt ggaattttag aatacgaaaa agtccaagta
     2041 gtcaatgtca ataatggcgc tagatttgaa acctatacca tagccacgca agaagaagga
     2101 gttgtatgct taaatggtgc tgcggctcgt cttgcagaag tgggagataa ggtgatcatc
     2161 atgtcttatg ctgattttaa tgaagaagaa gtaaaaacat ttaaaccaaa agttgttttt
     2221 gtggatgaaa ataacactgc tacaaaaata acaaattatg aaaaacacgg agctattttc
     2281 taacatctag ctatttttgt aattttttct atcttagata aattcattta tctaagataa
     2341 gtaaaaaatg atttttatat cttttaatcc attatttttg cttatcttaa cttctagttt
     2401 ttataaacca catctttttt cattaaaaat ttttttaaat tttgtccctc tttgataacc
     2461 ttgttttccc ttataagttc aaaaccattt tttaagaaaa aatctttagc acttaaggat
     2521 gcgaaagtgt aaatttcatt atgcaaataa gtttttaaaa taaaatcaag taaattttgt
     2581 gctaaacctt gtctaacaaa atcaggatga gtaaaaagca aatcaagcaa tttctgctct
     2641 tgtttaacac ttataaaact tgcgattttt cctctttttt catagacaaa gatctcatca
     2701 tatttaaatt tttcttccca ttgttgtcta tcaattttaa tccaagcaca aatttgatct
     2761 tttgtataat ccttagcaca aagtgttttt acgctttgct caaaaagcga caaacaagca
     2821 tttaaatctt taatatcagt ttttcttagc aagaactttt cttaatgcca agctggctag
     2881 ggctaaacca aaagatgcag tcacacccat aaaagatcca agatctttac aatgcgcttc
     2941 ctcatctgaa aataccacat caaaatttcc tttaaagcct gattttctaa gttcataacg
     3001 gaattttttc gctaaagcat ctccgtgggt tttaaatata cttgtagttt ttatacgcgt
     3061 aggatcaagc tttctagccc cacccgtaga agagataaaa atttgacgct taaaatcgat
     3121 caaatttgca agcgctactt ttgcaggaat atcatcaatt gcatcgatga ttaaatcaaa
     3181 ttcacttaaa tcaaaattcg ctaaaaattc attatctatt ttacttacta tacccttagc
     3241 attgtaaatt ctagcaaaaa ccttagcttt ttcttcgccc aaattttcac tatgaatttg
     3301 gcggttttga ttggtgattt caaatttatc cgcatcgatt aaagtaagat tttgaaaacc
     3361 gctacgataa agtgcgtcta cacacatccc acctactcca ccaagtccgc atacgagcac
     3421 cttggtttgt gaaattttat tgaagttttc ctcgcttact agccatttta tacgcgtaaa
     3481 tctatcattc attatttgcc tttaaccatt ttttaacttt tttcattttg tcataagcac
     3541 ttaaatcaag cattatagga gttatagtca cataaccctt tttcaataaa gctatatcgc
     3601 tatctttctc atcttcaaaa tccaaatttg ctgctgctag ccaataatac tccactccgc
     3661 gtggattgat atttgaatgc gcttcaaaat tatacactcg cttacctgct ttacaaattt
     3721 taatgccttt tatattggat tttgctggaa aattaatgtt taaaaattct ttttttccta
     3781 aaggaaagcc tttatcaaaa atattttgaa cgattttttt agtaattttt aaagcatttt
     3841 taaaatcaag ctctttttca ctttttttgt aaaattgcga aagagctatg gctggaattc
     3901 cttgtaaaac tgcttccata gcacccgcac aagtacctga atatgtgata tcttcaccca
     3961 catttgcacc tttattaatc ccacttatca caagatcagg caaacgcgtt ttataaagcg
     4021 catgaagagc aagataaaca caatctgcag gggttccatc atcaagcttg taaaatcttt
     4081 ttcctacttt gataaaacgc aagggttttg taagggttat agaatgtgaa caagctgatt
     4141 tttcagtagc aggcgcaact atggtaattt ttgctttaaa ttcttttttt aacattttaa
     4201 tgagtttttt aagtccctca ctttcaaaac catcatcatt ggtaataaga atttctttca
     4261 ttgctcttcc ttgcaaaaga taaaat
//
LOCUS       DAQUWA010000106         4186 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.106, whole genome shotgun sequence.
ACCESSION   DAQUWA010000106 DAQUWA010000000
VERSION     DAQUWA010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4186
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.106"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..974)
                     /locus_tag="R8X70_001783"
     CDS             complement(<1..974)
                     /locus_tag="R8X70_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929532.1"
                     /translation="MEKIKNYKLIILLLAFDLLALLYGISTLSISVDEAKIYFEEKGS
                     FLFFNHSLLYYLTHFGTFVFGQNDFGLRIPILFFHFLSCILLYILALKYTKTHFDSFL
                     SLLLFVLLPGTVASALLVNEASIVIFLTLAIICAYEYEKKWIFYPLLILALFVDKSFN
                     ILFLTFFFFGIYKRNSFLLTLALVLFGLSISFYGFDTGGRPRGYFLDTLGIFAACFSP
                     LVFIYFFYVVYRLTFKEQKSLLWFLMSVTFIFCSLLSLRQKLYLEDFLPFCVICTPLL
                     IKTLMASYRVRLPQFRLRYKIFIECSIIFLLFCYFVIIGNQILYYFVS"
     gene            1254..1838
                     /locus_tag="R8X70_001784"
     CDS             1254..1838
                     /locus_tag="R8X70_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEF2929533.1"
                     /translation="MQTIDQIFQAQIEIKKSTFLSYLCPFKDFKNLLVNLKKEHPKAV
                     HFVYAYRTLNEYNQIIEDKSDDGEPKGTSGIPSLNVLRGYDLVNTAVITVRYFGGTKL
                     GTGGLVRAYSDAANAAINNASLLTFEFKKNIKIAIDFKNLNRFEHFLRTHSLEFERDF
                     KNEKVILSLNLNEEEEQKFEIFCAQFTPFEIEKL"
     gene            complement(1870..2247)
                     /locus_tag="R8X70_001785"
     CDS             complement(1870..2247)
                     /locus_tag="R8X70_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929534.1"
                     /translation="MQVSYKTISSYEYDAISGQYKQVDKQVEDYSSTSDSDFMDILSK
                     LEENSGISSTEENLQNNTQSSNSNSSQYAQMSSMYAYRFRQNEGELSLKAQSASVHND
                     LLNQNANGQNKDSSLLGDLLNAI"
     gene            complement(2298..2633)
                     /locus_tag="R8X70_001786"
     CDS             complement(2298..2633)
                     /locus_tag="R8X70_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929535.1"
                     /translation="MMAKFRIQYSAGFGHFTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYNTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKIRDENCKRAKEEFIRDNELD
                     VEHLPTHGD"
     gene            complement(2623..>4186)
                     /locus_tag="R8X70_001787"
     CDS             complement(2623..>4186)
                     /locus_tag="R8X70_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEF2929536.1"
                     /translation="NLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFLKILSG
                     EIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKLYMSEE
                     FTDEINERLGELEIITAEEDPNYDCEIRCEKILSSLKIKDFDALMSTLQSADKFKVLL
                     AQVLFLGADVLFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKICTRILD
                     VDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQA
                     TSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLELKGISKAYDKELFSNLELK
                     IEKNDKIALIGANGVGKSTLAKIIANAIAPDSGSIHLGATIELGYFPQDTSNLICENL
                     KLYEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLMLERPNF
                     LLLDEPDNHLDLEGIIALGEALYNFKGVALCISHDRELVSAFANRIWHLKDGELTDFR
                     GTYQEFLGENDG"
BASE COUNT         1538 a          766 c          516 g         1366 t
ORIGIN      
        1 tcagaaacaa aataatataa aatttgattt cctatgataa caaaataaca aaatagtaaa
       61 aaaatgatag agcattctat aaaaatttta tatcttaatc taaattgcgg taaacgcacc
      121 ctataacttg ccatcaaggt tttaataagt agcggagtgc aaatcacaca aaatggcaaa
      181 aaatcctcca aataaagctt ttgcctcaaa gaaagcaagg aacaaaaaat aaaggttacg
      241 ctcattaaaa accatagtaa acttttttgc tctttaaaag ttaaacgata aactacataa
      301 aaaaaataaa taaaaacaag cggcgaaaaa caagcggcga aaattcccaa agtatccaaa
      361 aaatatcctc ttggacgccc acctgtatca aaaccataaa agcttatgct caaaccaaaa
      421 agtacaaggg ccaaagtcaa taaaaaagaa tttcttttat aaattccaaa aaagaaaaag
      481 gttaaaaata aaatattaaa agacttatct acaaataaag ctaaaatcaa aagcggataa
      541 aaaatccatt ttttttcata ttcatacgca caaattatag ctagcgttaa aaaaatcact
      601 atagaggctt catttaccaa caaagcactt gcaaccgttc ctggcaacaa tacaaaaagc
      661 aaaagagata agaagctatc aaaatgagtt tttgtatatt ttaaagccaa aatataaagt
      721 aaaatacaac ttaaaaaatg aaaaaataaa ataggaattc ttaaaccaaa gtcattttgt
      781 ccaaaaacaa aagttccaaa atgtgtgaga taataaagca aactatgatt aaaaaaaaga
      841 aaacttcctt tttcttcaaa ataaatttta gcctcatcaa cactaatgct aagggttgaa
      901 attccataaa gcaaagcaag taaatcaaaa gcaagtaaaa gaataataag cttataattt
      961 ttgatttttt ccataaattt gattttacaa aattaaactt aaaatatcaa ctgatgtaaa
     1021 tttcaaaaaa taatcccatg cctaatgtat aaaataaaaa tatttttata aaaagccaac
     1081 cttgtaacac cccattttat ttcttttata acttttgaat gaattcataa attttgactt
     1141 gtttttgaca tttctttcct taatttttgt aaaattatag tatattttta aaaattttat
     1201 taatacatta tattttacct tatttaatca taataccaaa taaaaaggcg aaaatgcaaa
     1261 caattgatca aatttttcaa gcacaaattg aaattaaaaa atctactttt ttatcctatc
     1321 tttgcccttt taaagatttt aaaaatttgc ttgtaaattt aaaaaaagaa caccccaaag
     1381 ccgttcattt tgtttatgct tatcgaactt taaatgaata caatcaaatc atagaagata
     1441 aaagtgatga tggcgagcct aagggcactt caggcatacc ttctttaaat gttttaagag
     1501 ggtatgatct tgtcaacact gcagtcatca ctgtaagata ttttggtggc accaaacttg
     1561 ggacaggagg acttgtaaga gcttatagtg acgcggcaaa tgcagcgatt aacaatgcct
     1621 ccttgctaac ttttgaattt aaaaaaaata tcaaaattgc catagatttt aaaaatctca
     1681 atcgcttcga acatttttta agaactcact ctttggaatt tgagcgagac tttaaaaatg
     1741 aaaaagtgat tttaagctta aatttaaacg aagaggaaga gcaaaagttt gaaatctttt
     1801 gcgcccaatt tacacctttt gaaatagaga aattataatc tatcttaaag cctcgtttga
     1861 ggctttaatt taaatcgcgt taagtaaatc acctaaaaga ctactgtctt tattttgtcc
     1921 atttgcattt tgatttaaaa gatcattatg cacactcgca ctttgagctt ttaaagaaag
     1981 ttcgccctcg ttttgcctaa aacgataagc atacatgctt gacatttgtg cgtattgaga
     2041 ggaattagaa tttgaacttt gggtattgtt ttgtaaattt tcttccgtac tagaaatacc
     2101 cgaattttcc tctaatttac ttaatatatc cataaaatca gaatcagaag tcgaagaata
     2161 atcttctact tgcttatcca cctgcttata ctgaccacta atcgcatcat attcatatga
     2221 gctaatagtt ttataactta cttgcatagc tttctccttt caaaatatgc aaaaactata
     2281 caagcaaaaa gtgttcctta atcaccatga gttggtaaat gctccacatc aagttcatta
     2341 tctcttataa attcttcttt tgctctcttg caattttcat cgcgtatttt acgatattca
     2401 ttgcgtatgg tgatttcttt gtcgcttaaa ggtctatctt ctaaaaaact gatatgaaaa
     2461 taagtatcat cgctttttga ataagtattg taaaaatcta tataatcaaa ataatcctta
     2521 ccattgtcaa attccactac ttcttctata taaatagtag gtccaaagcc tttatgattt
     2581 tgggtaaaat gtccaaagcc tgcgctatac tgaattctaa atttagccat cattttctcc
     2641 taaaaattct tggtaagttc cacgaaaatc agtcagttct ccatctttta agtgccaaat
     2701 acgattagca aaagcagaaa ccagctccct atcgtgactt atacaaagtg caacaccctt
     2761 gaaattatac aaagcttcac caagggctat gataccctca agatccaaat ggttatcagg
     2821 ctcatccaaa agtaaaaaat ttgggcgctc tagcatcaaa cgcgaaagca ttaaacgatg
     2881 tttttcccct ccgcttaagc tcgctgccat tttctcttga tcactaccac taaaaagcat
     2941 tctacctaaa cactttcgaa tttcatccaa atctttgaat ttttcactca taagccattc
     3001 gtaaagtttc aaattttcac aaattaaatt acttgtatct tggggaaaat atccaagttc
     3061 tatagtcgct ccaaggtgta tagaaccgct atcaggagca atagcattgg caatgatttt
     3121 agccaaagtt gacttaccta caccatttgc accaattaaa gcaattttgt catttttttc
     3181 gatttttaat tctaaatttg aaaacaattc tttatcataa gccttactaa tacccttaag
     3241 ctctaaaact tcatttccta tttcacgatt tgttctaaaa actatacttg gatccctgcg
     3301 acttgaaatt ttaatctctt caagctccaa tttctccaaa gcctttgcac gacttgtagc
     3361 ttgttttgcc ttagaagcat tcgcactaaa acggcggata aaattttcta attcttctct
     3421 ttcttttaaa gttttatcgc gcttaagttc agcttgttta gctaaaagtg ttgaagccat
     3481 ataccaatca tcataatttc ccgcaaaatc acgaatttgt ttaaaatcta catctaaaat
     3541 tcttgtacaa attttattta aaaaatgcct atcatgagaa atcaccacca aggttccctc
     3601 atgtcttaaa agttcatttt caagccaaga aattgcctct aaatcaaggt tatttgtagg
     3661 ctcatctaaa aaaagcacat cggcacctaa aaacaaaact tgagctaaca aaactttaaa
     3721 tttatccgca ctttgtaagg tgctcattaa agcatcaaaa tctttaatct ttaaagaact
     3781 taaaattttt tcacaacgta tttcacaatc ataatttgga tcttcttcag ccgttattat
     3841 ctcaagctca cctaaacgct cattgatctc atcagtaaat tcctcgctca tataaagctt
     3901 ttctttttct tttaaggcct catataaacg cttatttgca cacatcactg catctttgat
     3961 ggtgtagttt tcaaaagcaa attgatcttg acctaaaact gcgattttca agccttcatc
     4021 aaatactatt tcaccactac ttgactcaat ttctcctgaa agaattttta aaaaagtcga
     4081 ttttcctgca ccattagctc ctattagtcc gtatctttgt cctcgaacaa gctttaaatt
     4141 aacattttca aataaaagct gatttgcaaa acgcatagta agattt
//
LOCUS       DAQUWA010000107         4035 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.107, whole genome shotgun sequence.
ACCESSION   DAQUWA010000107 DAQUWA010000000
VERSION     DAQUWA010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4035
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.107"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            95..367
                     /locus_tag="R8X70_001788"
     CDS             95..367
                     /locus_tag="R8X70_001788"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929537.1"
                     /translation="MTQQIDFAKYQKMNERQKFNALLKEKKDIENLKEKIKFKKSVIG
                     YLQGELNFFLEQEFNDELKEAIEEIKNGGGTLCKSMEEFKAKMAED"
     gene            367..636
                     /locus_tag="R8X70_001789"
     CDS             367..636
                     /locus_tag="R8X70_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
                     /protein_id="HEF2929538.1"
                     /translation="MKYEIKYSTKFKKHYKKLNTKERQNADIIINRIANNETLEAKHR
                     DHALKGNYIGFRECHIQQDLLLVYQKQDDKLILYLLRIGSHSELF"
     gene            636..1829
                     /locus_tag="R8X70_001790"
     CDS             636..1829
                     /locus_tag="R8X70_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="HEF2929539.1"
                     /translation="MGAISSINFKKSNAIQTMHNDRELPPNYLIGGSCECNKSSIQAL
                     KLKEKIIQEAKEAYNNNKSAKAPSFKAKSYEWSAVVNIKLDTTMQDLERLALFLNEKY
                     GFQCYQIAIHRDEGHINEQGQKEINHHAHLEFITLNKENGRNMWRRELITPKVLRQMQ
                     SEVAEILGMERGEDKRISGAKRIEPRAYAVLKEKEKREKKKNINLEQEQEKEQFLNKS
                     EYKKIIEDFRKSQINQGLDKDFFKELSELKKNFQEIKEDNLSELLNDILREHLERIEK
                     LKKENSILKAENELLKQKEQKNDKSQGLFEFIENLAIFRLNEALNKIYSKPLKKILEA
                     ETEVKKKERVKILTEAMEKTKTHIPETFEKWIENNKDFDLKEILMTYQNSPSKELKQS
                     IYKGR"
     gene            2413..3432
                     /locus_tag="R8X70_001791"
     CDS             2413..3432
                     /locus_tag="R8X70_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HEF2929540.1"
                     /translation="MSEIVKYHNDFNKIQLPSFTEIEQDLLCGLMVKLKEEKGKVTFY
                     PWDLRNILKSSYDNNSLMEFASSLKRKFFKADFTIIEKTTRGEKEVEAHKTINLFTEF
                     AIYVYASSKDLESIEIQVNPRFEYILNQLTANFTAFELSEFIALSGKYTKTLYRLLKQ
                     FRTTGKAYFEWEEFCRIMDIPQDYRQSEIDKRILKPAIKELSKERNLFDQVRVPFKNL
                     AYEKEKAKGRGQGGKVSGITFTFKPENIQMQKLENESQKIMSDEQKYLKILNNMKLNQ
                     ARFNYNDKLWQFNDFDFDEFKIIAIELVRDEYENLNFGNHMHFNAKNQEQFFKMIDTF
                     RKGIR"
     gene            3404..3835
                     /locus_tag="R8X70_001792"
     CDS             3404..3835
                     /locus_tag="R8X70_001792"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929541.1"
                     /translation="MILLEKVLDERKRQKQEKENDNANNTRTNSTGIVRENDKTEPRE
                     ISQSSSLSDPERDGGYSTMATLGLSDNLQTIRFKRELSESLSRNTDEPRNTAQSRLSR
                     AESRESGAIISANKEFQNINDEKIPSKLNKEESKEFNIPAL"
BASE COUNT         1697 a          542 c          695 g         1101 t
ORIGIN      
        1 aaaaaaaaca agttttattt ttttggtaat ttgttttaaa aaatatgata taatttcaca
       61 agttcaatta catatttttt aaaaggatta atcaatgaca caacaaattg attttgcaaa
      121 atatcaaaaa atgaatgaga gacaaaagtt taatgcactg ctaaaagaaa aaaaagatat
      181 tgaaaatttg aaagaaaaaa ttaaatttaa aaaaagcgta ataggctatt tacaaggaga
      241 attaaatttt ttcttagagc aagaatttaa cgatgaatta aaagaagcga tagaagaaat
      301 aaaaaatggt ggtggaacac tttgtaaatc aatggaagaa tttaaagcaa aaatggcaga
      361 agattaatga aatatgaaat taaatactct acgaagttta aaaagcatta caaaaagcta
      421 aacaccaaag aacgacaaaa cgcggatata atcattaatc gcattgcaaa taatgagact
      481 ttagaagcaa aacatagaga ccacgcacta aaaggaaatt atattggctt tagagagtgc
      541 catatacaac aagacttact tttagtttat caaaagcaag acgataaatt aattctttat
      601 ctgcttagaa taggttcaca tagcgagtta ttttaatggg tgctatctct agcattaact
      661 ttaaaaaaag caatgctatt caaacaatgc ataatgatag agaattaccg cctaattatt
      721 taatcggtgg aagttgtgag tgcaataaaa gcagtattca agccctaaaa cttaaagaaa
      781 aaatcataca agaagcaaaa gaagcttaca acaacaataa aagtgcaaaa gcaccaagct
      841 ttaaagcaaa aagttatgaa tggagtgcgg ttgttaatat aaagcttgat accacaatgc
      901 aagatcttga aagacttgca ttgtttttaa atgaaaaata tggctttcaa tgctatcaaa
      961 tagctataca cagagatgaa gggcatataa acgagcaagg acaaaaagaa atcaatcatc
     1021 acgcacattt agaatttatt acgctcaata aagaaaatgg gcgtaatatg tggcgtagag
     1081 aactcattac accaaaagtt ttaagacaaa tgcaaagcga agtcgccgaa atcttaggaa
     1141 tggagcgtgg cgaagataag agaataagcg gagcaaaacg catagagcct agagcttatg
     1201 cagtcttaaa agaaaaggaa aaaagggaga aaaagaaaaa tattaattta gagcaagagc
     1261 aggaaaaaga gcaattttta aataaaagcg agtataaaaa aatcatagaa gattttagaa
     1321 aaagtcaaat taatcaagga cttgataaag attttttcaa ggagctaagc gaacttaaaa
     1381 agaatttcca agaaatcaaa gaagacaatc tatccgaact tttaaacgat attttaagag
     1441 agcatttaga acgcattgaa aagttaaaaa aagagaatag cattttaaaa gccgaaaatg
     1501 agcttttaaa gcaaaaagag caaaaaaacg ataaatcaca agggcttttt gaatttattg
     1561 aaaatttagc catttttaga ctaaatgaag cattaaataa aatttattct aaacctttga
     1621 aaaaaatttt agaagcagaa actgaagtta aaaagaaaga aagagttaaa attttaacag
     1681 aagcaatgga aaaaacaaaa actcacatac ccgaaacttt tgaaaaatgg attgagaata
     1741 acaaagactt tgatttaaaa gaaatactta tgacttatca aaatagccct agcaaagaat
     1801 taaaacaaag catttataaa ggcagatgat acttactttc tcccttttag cttagcaaat
     1861 cgcaccaaag gtgcaatgat ttgcggtaat cggggtaagg gggcgtgaag ctttcctaga
     1921 gaaagcgaac ggataagccc ccttcctaat gtatatcatc aaaacaaaaa aagttttgtt
     1981 tttctcgcgc gcgtacgcgt acgcgatttt ttttattttt tatatatttt tcttattttt
     2041 agggggcttt ctaaagacta tatgataggg gctagcgaaa tattaagggg acaaaattct
     2101 actattaagg ggacaaattt aaactattaa ggggacaaat ttaaactatt aaggggacaa
     2161 atttaaacta ttaaggggac aaaatatatt gacaatagtc accttaatat gctacaataa
     2221 aaaatccgcc ttgagttttc actcttggcg gaaatttatc aatcaaggct aactatgaaa
     2281 cgacatagta agcgttttgt gagattatac ctaaatttta ggttttttaa gcttaaagtt
     2341 gaagtatttt tctagcaaaa ccgcaggggc ggaaaagccc cttgccttga ttgtcttact
     2401 ttggatatgt aaatgagcga aatagttaaa tatcacaacg attttaataa aattcagttg
     2461 cctagcttta cagaaatcga acaagattta ttgtgtggtt taatggtaaa acttaaagaa
     2521 gaaaagggca aagtaacatt ctatccttgg gacttaagaa acattctcaa aagtagttat
     2581 gataataata gtttaatgga atttgcgtct tctctaaaaa ggaaattttt taaagctgac
     2641 tttacaataa ttgaaaaaac aactagggga gaaaaagaag ttgaagcaca caagacaata
     2701 aaccttttta cagaatttgc aatttatgtt tatgcaagct caaaagattt agagagtata
     2761 gaaatacaag ttaatccacg ctttgaatat attttaaatc agcttacagc taattttaca
     2821 gcttttgaac ttagcgagtt tattgccctt agtggcaaat atacaaaaac tttatacagg
     2881 cttttaaagc aatttagaac cacaggcaaa gcttattttg agtgggaaga attttgcagg
     2941 attatggata taccacaaga ttacagacaa agcgaaatcg ataaacgaat tttaaaacct
     3001 gccataaaag aactttctaa agaacgcaat cttttcgacc aagtgcgagt gccttttaaa
     3061 aatcttgcct atgaaaaaga aaaagcaaaa gggcgggggc aaggtggcaa agtttcaggt
     3121 attaccttta cttttaaacc tgaaaatatc caaatgcaaa agctagaaaa tgaaagtcaa
     3181 aaaataatga gcgatgagca aaaatattta aagattttaa acaatatgaa acttaatcaa
     3241 gctagattta attataatga caagctttgg cagtttaacg attttgattt tgatgaattt
     3301 aaaattattg caatagagct tgtaagagat gaatacgaga atttaaactt tggaaatcat
     3361 atgcacttta atgctaaaaa tcaagagcag ttttttaaaa tgattgatac ttttagaaaa
     3421 ggtattagat gagcgaaaaa gacaaaaaca ggagaaagaa aatgacaatg caaataatac
     3481 aagaacaaat tccacaggaa ttgtcaggga gaatgacaaa acagagccta gagagattag
     3541 ccaatcatct tcacttagcg acccagaacg agatggggga tattccacta tggctacttt
     3601 gggacttagc gataacttgc aaacaattag atttaaaaga gaattatcag aaagtcttag
     3661 tagaaataca gatgaaccta gaaacacagc acaaagcaga cttagcagag cagagagcag
     3721 agaaagcgga gcaattatat cagcaaataa agaatttcag aatatcaatg atgaaaaaat
     3781 accaagcaag ttaaataaag aagaaagcaa ggaatttaat atccccgctc tatgacgggg
     3841 caacctatct aaaagataag ctaattcttc actaaacttt catttaggaa gtcaaaaaaa
     3901 ttatatcata aataacttta tttaatactt ttaacattaa atgagcttgt gaatttaatg
     3961 ttaatccacg cagtgcaaat taccaaatat ttttacttgt aaaatatgtt tggataattt
     4021 gcaaattatc caaac
//
LOCUS       DAQUWA010000108         3885 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.108, whole genome shotgun sequence.
ACCESSION   DAQUWA010000108 DAQUWA010000000
VERSION     DAQUWA010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3885
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.108"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            137..234
                     /gene="ffs"
                     /locus_tag="R8X70_001793"
     ncRNA           137..234
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="R8X70_001793"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            382..2190
                     /locus_tag="R8X70_001794"
     CDS             382..2190
                     /locus_tag="R8X70_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEF2929542.1"
                     /translation="MEKKKIPMLILCVLIALAFWIIPTPIGLEENSWHFLGLFIAVIM
                     AVILQVMPLGAVCMIAIAIVALSGITTTQSSVRATHIKTLEAIVLKDNSNIYKVTMEQ
                     KSQASILENLIKANVAKNLEPKVNEILKSNSNIEYQIDSLNKLYAKATSKVAAQKLID
                     ESKIAALNSLALEFMSQKDIDEKVNTAISSLKSKTGIKDALSGFSNSLIWLIVVSIIV
                     ARGVIKTGLGERLAYYFISIFGKKTLGIAYSIAFCETILAPVTPSNTARAGAIINPIV
                     QAISRSFKSTPEDGTQNKIGTYLSLVNFQANPISSAMFITATAPNPLVVDLVAQATNL
                     EVHLTWGQWALGMFLPGIAAMLLMPLAIYFLSPPEIKSTPNAKIFAKGKLEELGAMKG
                     SEKIMLGVFVLLLLLWAGALGFLFGISLDATSVALLGLSLVLVSGVLTFGEVLAEKAA
                     WNTLVWFSALVMMATLLGKLGVTQFLAEALGEFASAMGLGEISIMIFLSLAFLYTHYF
                     FASTTAHISAMFFVFYSAGLALGAPPLLYAFIMIASGNVMMALTHYATGTAPVIFGTG
                     YVSLKKWWSVGFVISVIDITVMILVGLVWWKFLGFY"
     gene            complement(2225..3241)
                     /gene="mnmA"
                     /locus_tag="R8X70_001795"
     CDS             complement(2225..3241)
                     /gene="mnmA"
                     /locus_tag="R8X70_001795"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEF2929543.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIRTAVDESKDQSYFLASADKEALKYLIFPLGEMKK
                     EDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHKPHFVLKINPKQNQIIVGTKEELKINEFKLKNINLFI
                     DAKELDCEVKIRYRSKSTPCKVIISDDKSASISLKESVYGLASGQMAVFYDGDKVIAS
                     GFIE"
     gene            complement(3241..3846)
                     /locus_tag="R8X70_001796"
     CDS             complement(3241..3846)
                     /locus_tag="R8X70_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEF2929544.1"
                     /translation="MNEKISQDLEKFANIPNLKNAVTFFGSARLKEDSFYYQEAKKLA
                     SLCVENGFCVVSGGGGGIMRAANAGAAKCKNDANFIKSVGFNILLPFEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEVLTLKQLGFKSNVPIILLGSEFW
                     QGFDEFVRNSLLKLEVISKGDELKYEITDDLDYIINTLKEL"
BASE COUNT         1157 a          658 c          657 g         1413 t
ORIGIN      
        1 aaaacaataa ttttgcaaat taaatttaaa aatttatata aaatatagcc aatttgttac
       61 atatttatac atttttatat ttagttttta tagctcaaca ctttttaagt atattatgat
      121 ataatttctt tgccttttct tagacctgtg caatgctatt tttaagcacc gcttcagggt
      181 gggaacacag cagagcactt gattgtagtg tgtgccgcag ccatctggga aagggtttat
      241 ttcatttaaa cttacttttt atatctctta aatattttta ttttcatata gaatttcaag
      301 actttggtaa aaatttttta atacttaatt aagaattgtt aaattaaaat ttaacaaatt
      361 taatacaata aaggagctta aatggagaaa aagaaaatcc ccatgcttat actgtgtgtc
      421 cttattgcgc ttgcattttg gataatccct actcctatag gtttagagga gaattcttgg
      481 cattttcttg gactttttat tgcggtgatt atggcggtta tcttacaggt aatgccttta
      541 ggagctgtgt gtatgatagc tattgctatt gtggcactaa gtggaatcac gaccactcaa
      601 agttctgttc gtgctacaca tatcaaaact cttgaagcca ttgttttaaa agataattct
      661 aatatctata aagttaccat ggaacaaaaa tcacaagcta gtattttgga aaatctcatc
      721 aaagcaaatg tggctaaaaa tttagaacct aaagtaaatg agattttaaa atctaattca
      781 aacatagaat atcaaataga tagtctaaat aaactttatg caaaagcgac ttcaaaagtt
      841 gctgcgcaaa agcttattga tgagagcaag atcgcggcat taaactcttt agctcttgaa
      901 tttatgtccc aaaaagatat agatgaaaaa gttaatactg caatatcaag tttaaaatcc
      961 aaaacaggta ttaaggatgc tttaagcgga ttttctaatt ctttaatttg gcttatagta
     1021 gtttctatca ttgtagctcg tggagttata aaaacaggac ttggagagcg tttggcgtat
     1081 tattttatca gtatctttgg taagaaaact ttaggtattg cgtattctat cgcattttgc
     1141 gaaaccatct tagctcctgt aaccccttca aatacagcaa gagcgggtgc gataatcaat
     1201 cctatagttc aagctatctc aagaagtttt aaatctactc ctgaagatgg aacacaaaat
     1261 aaaataggca cctatctttc tttggtgaat tttcaagcca atcctatttc ttcggcaatg
     1321 tttatcacag ccactgctcc aaatccattg gttgttgatt tggtcgctca agctacaaat
     1381 ttagaagtgc atttaacctg ggggcaatgg gctttaggta tgtttttacc tggtatagcg
     1441 gctatgcttt taatgccttt ggcgatttat tttctttctc caccagagat taaatcaacc
     1501 ccaaatgcta agatttttgc aaagggtaag ttagaagaac tgggtgctat gaagggtagt
     1561 gaaaagatta tgctaggtgt ttttgtattg cttttgcttt tatgggcagg ggctttgggc
     1621 tttctttttg gaatttctct tgatgctaca agtgttgcct tgcttggtct ttctttggtt
     1681 ttagtaagtg gagttttgac ttttggtgag gtgttggcag aaaaagctgc ttggaatact
     1741 ttggtatggt tttcagccct tgtgatgatg gcaactttac ttggaaagct cggtgtaacg
     1801 cagtttttag ctgaagcttt gggtgaattt gcctctgcta tgggacttgg tgaaatttct
     1861 attatgattt tcttaagcct tgccttttta tatacgcatt atttctttgc ttcaaccaca
     1921 gcgcatattt cagctatgtt ttttgtattt tatagtgcag gacttgcttt aggggctcca
     1981 ccacttcttt atgcttttat tatgatagca tcaggaaatg ttatgatggc cttaacgcat
     2041 tatgcaacag gaacagctcc agttattttt ggaacaggtt atgtaagtct taaaaaatgg
     2101 tggtctgtag gatttgttat ttcagtgata gatataaccg taatgatact tgttggcctt
     2161 gtatggtgga aatttttggg attttattaa aatcttatca aagcttttaa agctttgata
     2221 agtcttattc tataaacccg cttgcaatga ctttatcacc atcgtaaaat actgccattt
     2281 gcccacttgc taaaccataa acactctctt ttaaagaaat gcttgcgctt ttatcatcac
     2341 ttataatgac tttacacggg gtggattttg atctatagcg gatttttact tcgcaatcaa
     2401 gctcttttgc atcgatgaaa agattgatat ttttgagttt aaattcattg atttttaatt
     2461 cttctttggt gccaacgatg atttgatttt gtttaggatt gatctttaaa acaaaatgcg
     2521 gtttgtgagc cccgcgtact tcaaaaccgc gtcttttgcc tatggtatag tgcatatagc
     2581 cttcgtgttt tcctacaacc ttaccgctac tatctagcac ttctcctgga attttagtat
     2641 ccataaattg atctaaaact tgcacataag tatcttcaac aaagcaaatt tcagaacttt
     2701 ctttttgggt tgcaaatgat tttaaaactt ctatggtaga agcaaatttt ttcacatctt
     2761 cttttttcat ttcgcccaat ggaaagatga ggtattttaa agcttctttg tcggcactgg
     2821 ctaaaaaata gctttgatcc ttgctttcat caacagctgt acgaatgaga ttgttttcaa
     2881 gtcttgcata atgccctgta gcaagttttt cacaacctaa acttttagca aattctaaaa
     2941 gttttccaag tttgataaaa cggttacata aagcgcaagg atttggtgtt ttaccctctt
     3001 tataagtatc cacaaaaggc atgtaaactt tgtttttaaa atcttcttgc aagtctaaaa
     3061 tatgataagg aatttgcaaa aagtttgcaa ctttttctac ttttttgata ttttcttcgt
     3121 gataattggg tttgccatga agcttcatat aacaacctat aacttcatga cctaaatttt
     3181 taagtttata agcagtgact gtgctatcga ccccaccgct catagcgact agaattttca
     3241 ttagagttcc tttaaagtat tgattatata atctaaatcg tcagtgattt catactttaa
     3301 ctcgtctcct ttggaaatga cttcaagttt tagcaaagaa tttctgacga actcatcaaa
     3361 gccttgccaa aattcactcc caagcaagat aataggaaca ttgcttttaa atccaagttg
     3421 ttttagtgta agcacttcac acaattcatc aagtgttcca aagccgcctg ggaaaatcac
     3481 aaaagctaga ctcttttcaa taagagccat tttgcgtatg gctaagctct caaaagttat
     3541 gttatattct acaaaatcgt ttaatttttg ctcaaaaggc aaaagtatat taaaacctac
     3601 cgattttata aaatttgcat cgtttttaca tttagcagcg cctgcattag ctgcacgcat
     3661 aatgcctcca cctccgccgc taacgacaca aaagccattt tctacacata aactagctaa
     3721 ttttttggct tcttgataat aaaaactatc ttcttttaat cttgcagaac caaaaaaagt
     3781 tacggcattt tttaggtttg gtatgttagc aaatttttct aaatcttggc ttattttttc
     3841 attcattttt caacctttag ttaaaataaa ttccattcta gctaa
//
LOCUS       DAQUWA010000109         3870 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.109, whole genome shotgun sequence.
ACCESSION   DAQUWA010000109 DAQUWA010000000
VERSION     DAQUWA010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3870
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.109"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(138..479)
                     /locus_tag="R8X70_001797"
     CDS             complement(138..479)
                     /locus_tag="R8X70_001797"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929545.1"
                     /translation="MNKISKEELQKATEESLTNVYSYDPNSPSGYRKDLFDISNEDFV
                     EKYEFIDSPTSDDMVKCKQSDEVFQVFYKKDGKIRLLRVSNVQALNHFDKLKGVMTKI
                     ILDSGFKPDEQ"
     gene            complement(481..927)
                     /locus_tag="R8X70_001798"
     CDS             complement(481..927)
                     /locus_tag="R8X70_001798"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929546.1"
                     /translation="MRNKELKIIEAYGAFMSILFSFLIVYEDVWTNILKIFLYTEIQA
                     FFIFFVRIFMILHMILFMGFLLDAKIKAEHNQLIKLLADKKKKLTVIFLIPLQISFLC
                     SVVLVFFFNIFPNIHSLDFSFYTIFICVILLYNLILLYNFTKIIRS"
     gene            complement(1055..1405)
                     /locus_tag="R8X70_001799"
     CDS             complement(1055..1405)
                     /locus_tag="R8X70_001799"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929547.1"
                     /translation="MKDNENKSTRVTFFINDEKVASILEQLPKGVRSMFIEQAILEYS
                     SKKPKVEFFFHGITKTRRINKVKQQDKNSEENNLQSKISKENNVQANINELKNDNKAQ
                     KKSGGMMFNFGNKE"
     gene            complement(1558..1941)
                     /locus_tag="R8X70_001800"
     CDS             complement(1558..1941)
                     /locus_tag="R8X70_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929548.1"
                     /translation="MKLKDFDFRIWDKHHKGCGNKDCKCQTKYVYGEEAKTRLSEFKE
                     DCEIELFTGLYDKKGKKVYENDIVKVKSLYDYFLAKISIHKEGTFYFEGKNGDYIGSL
                     IYLVEDEGYTIEAIGNINENAELLK"
     gene            complement(1922..2203)
                     /locus_tag="R8X70_001801"
     CDS             complement(1922..2203)
                     /locus_tag="R8X70_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929549.1"
                     /translation="MKTFNTDDYIAIVKIIPFSERRTCFCDFAKQNEIKIEKINWKNY
                     INKEDLKKVYTIYKNKPHERNFFHEEKLIVKAFEDVEKFLRSENETKRF"
     gene            complement(2258..2479)
                     /locus_tag="R8X70_001802"
     CDS             complement(2258..2479)
                     /locus_tag="R8X70_001802"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929550.1"
                     /translation="MNQEIKNVEVPMNENAYKKWQRVPKDMQEKAIEAALTMLWRDEV
                     FFYTFFNGHIEEGEIRIEAKREKKVEFPY"
     gene            complement(2463..2957)
                     /locus_tag="R8X70_001803"
     CDS             complement(2463..2957)
                     /locus_tag="R8X70_001803"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929551.1"
                     /translation="MLSLILNMDVRYFLFILIFIAVICFLLWKSLEEELNFTSRMILI
                     CLSLIFIFASYKFYDAFYYEENSAKKEAVQNYIQTIENNIDPRFKDKIKEQFSSIPNT
                     FGFNLCYENNYTGETCLNYLFYFENKVKDEVKKAREEFFKGRDINNNINDKFNKGEEN
                     ESRN"
     gene            complement(2974..>3870)
                     /locus_tag="R8X70_001804"
     CDS             complement(2974..>3870)
                     /locus_tag="R8X70_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParM/StbA family protein"
                     /protein_id="HEF2929552.1"
                     /translation="AIDIGYGDTKVFFNGKTLKFPSAVSEVRQAQVDLSETKTDIYTY
                     NGTQYRVGEKAITNAIATRGFNFLNKYSPLLVFHALNQTGVDLSQPIEIATGLSILNY
                     HSANDFKEVIENFTINKIHLEPSVFLFAQGQGIFLEYPNHEDSLVGIIDIGYNTLDFL
                     VFEDKEPRSDLCFANQGGANRIIVDLQKILTREFRVDFSEQEAKKVFLNKEVKIAGKV
                     IDFKDEIKSMTERYIDFVLDEFANKCGDLMMRSDGVIIGGGGAYFLDQEYIKETHPNI
                     ILAPSPHEFSNVRGYYKGAFEN"
BASE COUNT         1283 a          642 c          398 g         1547 t
ORIGIN      
        1 tctataaaat atttatataa ttttatagat ttttttagaa tttacttagc agtttccaac
       61 ccctccaatt gtcttttttt tgtttccagt ctctaatagt gaaataagga atattagcaa
      121 tttgtgaaat ttggacatca ttgttcatca ggcttgaaac cactatctaa aattattttt
      181 gtcattacac ccttaagttt atcaaaatga tttaaagctt gcacattgct aactctaagc
      241 aatcttattt tcccatcttt tttataaaac acctgaaaaa cttcatcgct ttgtttgcat
      301 tttaccatgt catctgaagt aggactatct atgaattcat atttttcaac aaaatcttca
      361 tttgaaatat caaataaatc ttttctatag ccacttggcg aatttggatc ataagaataa
      421 acattagtca atgattcctc tgtagccttt tgtagttctt cttttgaaat tttgttcatc
      481 ttaactccta ataatttttg taaaattata caacaatata agattataca atagtataac
      541 acaaataaaa attgtataaa agctaaaatc taatgaatgt atattcggaa aaatattaaa
      601 gaaaaaaacc agcacaacag aacaaagaaa agaaatttgc aaaggtatga gaaaaataac
      661 agtcaacttc ttttttttat cagcaagcaa ttttattaat tgattgtgtt cggctttaat
      721 ctttgcatct aataaaaaac ccataaataa tatcatatgt aaaatcataa aaattctaac
      781 aaaaaaaata aaaaaagctt gaatttctgt gtagagaaat atttttaaaa tattagtcca
      841 aacatcttca tacacgatta aaaaactaaa taatattgac ataaaagccc cataagcttc
      901 tattattttc aattctttat ttctcataca aactttcctt ttttaatgca agtaaatctt
      961 ccatggtgtt atctatgatt agaatttttg ggttttgttc tcctttattt ttattttact
     1021 ttaagcttta gatttaggac aagtggaatt aatattactc tttgttgcca aaattgaaca
     1081 tcattccacc gctttttttc tgagccttat tatcattttt aagctcattt atattagctt
     1141 gaacattgtt ttcttttgaa attttagatt gtaaattatt ctcttcagag tttttatctt
     1201 gctgttttac cttatttatt cttcttgtct tggtaatccc atgaaaaaag aattctactt
     1261 taggtttttt tgaagaatat tctaaaatag cttgttcgat aaacatgctc ctaacgcctt
     1321 tcggtaattg ttctaaaatc gaagcaactt tttcatcatt tataaaaaaa gttactcttg
     1381 ttgatttatt ttcattatct ttcattgttt ctccttaatt cttttttcta aaagctcaat
     1441 ttttttaata tttaattcca agattttaat atttaattct aatgtttttt tgttttgttc
     1501 taaaagctca acttgtgctt tttgatattt atagttaaaa aacatcagat aatttcatta
     1561 ttttagcaac tccgcattct cgttgatatt gccgatagct tcaatagtat atccttcatc
     1621 ttcaactaaa taaattaaag agcctatgta atctccattt tttccttcaa aataaaaagt
     1681 cccttctttg tgaatgctga tttttgctaa aaagtaatcg tatagacttt taactttaac
     1741 aatatcattc tcgtatactt ttttaccttt cttgtcataa agccctgtaa aaagctctat
     1801 ttcacaatcc tctttaaact cagataacct tgttttggct tcttcaccat aaacatattt
     1861 tgtttggcat ttgcaatcct tattaccaca acccttgtga tgcttatccc aaatcctaaa
     1921 atcaaaatct tttagtttca ttttcactcc ttaaaaattt ctcaacatct tcaaaagctt
     1981 taacaataag cttttcttca tgaaagaaat ttctttcatg tggcttgttt ttataaattg
     2041 tataaacttt tttaagatct tctttgttta tgtaattttt ccaatttatc ttctcaattt
     2101 ttatttcatt ctgttttgca aaatcacaaa aacaagttct tctttcacta aatggtatga
     2161 tttttacaat cgcaatataa tcatcagtat taaaagtttt catatattct cttttacatc
     2221 ataatatgta cttaaagcaa tttgtgtgct gaatatccta ataaggaaat tcaacttttt
     2281 tttcacgctt tgcttctatt ctaatctcgc cttcttcaat gtgtccatta aaaaaagtat
     2341 agaaaaatac ttcatctctc cataacattg taagagcagc ttcaatagct ttttcttgca
     2401 tgtcttttgg aactctttgc cattttttat aagcattttc attcattgga acttctacat
     2461 ttttaatttc ttgattcatt ttcttctcct ttgttgaatt tatcattgat attattgtta
     2521 atatctctac ctttaaaaaa ctcttcccta gcttttttaa cttcatcttt gaccttattt
     2581 tcaaaataaa aaagatagtt taaacaagtt tcacctgtat aattattctc atagcataaa
     2641 ttaaaaccaa aagtattagg tatagaacta aattgttctt tgattttatc tttaaatctt
     2701 ggatcaatgt tgttttctat agtttgtata tagttttgaa cagcttcttt tttggcacta
     2761 ttttcttcat aataaaaagc atcataaaac ttataactcg caaaaatgaa aataagcgat
     2821 aaacatatta aaatcattct gcttgtaaag tttaattctt cttcaagaga tttccataga
     2881 agaaaacata ttacagctat aaaaattaga ataaaaagaa aatatctaac atccatatta
     2941 agaattaaag aaagcattat ctatctcctt accttagttt tcaaaagcac ctttataata
     3001 acctctaaca tttgaaaatt catgcggact aggtgctaaa ataatatttg ggtgcgtttc
     3061 ttttatatat tcttgatcta agaaataagc accgcctccg cctataataa cgccatcaga
     3121 acgcatcatc aaatcaccac acttattagc aaattcatct aatacaaaat caatatatct
     3181 ttcagtcatg gatttaattt catctttgaa atcaattact ttaccagcaa ttttaacttc
     3241 cttatttaag aatactttct tagcttcttg ctcactaaaa tctactctaa actctcttgt
     3301 taatattttt tgtaaatcta ctataatacg atttgctccg ccttgatttg caaaacaaag
     3361 atctgatctt ggctctttat cttcaaaaac caaaaagtct aaagtgttat agcctatatc
     3421 aattataccc acaagactat cttcatgatt tggatattct aaaaatatac cctgcccttg
     3481 tgcaaataaa aatacacttg gttcaagatg aatcttatta attgtaaaat tttctatcac
     3541 ttctttaaaa tcatttgcac tatgataatt taaaatagaa agtcctgttg ctatttcaat
     3601 aggttgtgat aaatctactc ctgtttgatt aagagcatga aaaactaaca aaggagagta
     3661 tttatttaaa aaattaaaac ccctagttgc tatagcattt gtaattgctt tttcccctac
     3721 tctatattga gttccattat aggtatatat atctgttttt gtttcagata aatctacttg
     3781 agcttgtctc acctcagaaa cagctgatgg aaattttaaa gtttttccat tgaagaatac
     3841 ttttgtatct ccatatccta tatcaatggc
//
LOCUS       DAQUWA010000110         3828 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.110, whole genome shotgun sequence.
ACCESSION   DAQUWA010000110 DAQUWA010000000
VERSION     DAQUWA010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.110"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            55..561
                     /locus_tag="R8X70_001805"
     CDS             55..561
                     /locus_tag="R8X70_001805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929553.1"
                     /translation="MKVEIKEDLLIKINSLLFYARNLKDINSQHKNKLEKDLSILETL
                     IKNYEKELNIKKTNIECAFKTLENIFYYIDNDTKEKISFQIGLKEFYKKAYIEITDMS
                     VYPILILMCDIIYNKSILYCIEKKFNKTKTFNDFMLEMQEKYKLNSKKIKRKELLNTI
                     IKAFKDFS"
     gene            854..1036
                     /locus_tag="R8X70_001806"
     CDS             854..1036
                     /locus_tag="R8X70_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEF2929554.1"
                     /translation="MQHINKDFLTIQEVITLYSLSKDTQNKYRMQKKIPYVKIGKKIF
                     YEKVKLDEWFKNHTIN"
     gene            1047..1340
                     /locus_tag="R8X70_001807"
     CDS             1047..1340
                     /locus_tag="R8X70_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929555.1"
                     /translation="MNDRQALEYLKDELLFIFNVRFKYFDFSMFSLLKDKLRPLLKNT
                     SFEKEIKELLSVLEVHKKSFLENKVFTKKEQKRIILLNACKATYEALKHKLKT"
     gene            1342..2457
                     /locus_tag="R8X70_001808"
     CDS             1342..2457
                     /locus_tag="R8X70_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929556.1"
                     /translation="MSISLFNDEIKAYIKNYYSIVDFLYLRYGLEFDKQGNEKHNKSL
                     KIKTNTCLITDFNGSFSGDIIDFIAFKENVGLKEALIIFSDFNRLPTQKVGSFKPQKE
                     PLKDNSYLKNIAYSLQANFNLANSDFIECKALEKAFFNDFRLFMHLCKLNFLKDDEFE
                     SILKDYFAFSKDDKSLAFILKDKNEIKSVAIREKLFKNELVKWFKVKGSSNKFIKLIK
                     AKEKGLLKDYCFIFSGIKEIIVSELLGLNAVCFQSDSMMKNIHSHEQINELLNLIDNK
                     RIVFIVENDESSFKANLELLKELIQINPLKKGYCVFNYDEVKNADFIDFLAYLMKELR
                     QDYQRDKKGLNSFFSYMEKYFKNYFNKKINLFLKVKK"
     gene            2454..3647
                     /locus_tag="R8X70_001809"
     CDS             2454..3647
                     /locus_tag="R8X70_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEF2929557.1"
                     /translation="MKDYSKEINDLKKIKSQDIDKLDFKEFENIKSKINETSCNPSKI
                     ISQKNANIKNNSFVDLTQWAIRSVDLEKIEFTSLIDDFLDKGSISFLTSEANKGKTFL
                     SFAICKHLLEFNKIRKIIYFDGDNSKITIKSRIKKSMQIGGYYFLDYPGFNYIQTSNA
                     LECGTDEIEVDFNFIIEKYLEPLMQSGGLVNVFIVFDSLFNFFNGDMNDNKKVAEFMK
                     IIKKISHKGEATFLFIHHKGKSAESEFMGGVNFLNATDNLFKIQTSNNDGEILNIELN
                     TKKARNFLPYNLKVDIDLNTLDLKIERAVNENDTNFLIKAKEIIEQKGEILQGELLEL
                     LEKSKTDTHAIKKLESGKGLYFNIIEKSRATGGKALKYYVPLKENKTIINGIEINAEQ
                     TLFSE"
BASE COUNT         1648 a          363 c          551 g         1266 t
ORIGIN      
        1 aaaaatagca gattttggaa cgatttagat atttttaata aattaaaacc agaagtgaaa
       61 gttgagataa aagaagactt actaataaaa ataaatagtt tattatttta tgcaagaaat
      121 ttaaaagata taaattcaca acataaaaat aaattagaaa aagatttatc aatactagaa
      181 acattaatta aaaattatga aaaagaacta aatataaaaa aaaccaatat cgaatgtgct
      241 tttaaaaccc tagaaaacat tttttattat atagacaatg atacaaagga aaaaataagt
      301 tttcaaatag gacttaaaga gttttacaaa aaagcgtata tagaaataac agatatgagt
      361 gtatatccta ttttgatttt aatgtgcgat ataatctata ataaaagcat tctttattgc
      421 atagaaaaaa aatttaataa gacaaaaact tttaatgatt ttatgcttga aatgcaagag
      481 aaatataagc taaatagcaa aaagattaaa agaaaagaat tgttaaatac aatcataaaa
      541 gcttttaaag acttcagcta aaaaagggca aaaaattttt tttaattttg aacttgccct
      601 ttttttacaa aactgctaaa atacttcgta aatatttcaa ataatatttt ttaatctaat
      661 gaaacttgaa aagctttaaa ctttttcagc tagtgcgttt taattctttg tttggcgact
      721 tgattaaaac gcacaatttc attataagag ccatagttta agcccttaaa agaaattgta
      781 ataaatttaa acttactaat tcctttttaa tggctttatt aattgcatta ataaaattta
      841 gaaaggatac aaaatgcaac acataaacaa agacttttta actatacaag aagtaattac
      901 actttacagc ttaagcaaag atactcaaaa taaatacaga atgcaaaaga aaatacctta
      961 tgttaaaata ggtaaaaaaa tcttttatga aaaagttaag cttgatgagt ggtttaaaaa
     1021 ccatactatc aattaaaggg taagttatga atgatagaca agctttagaa tacttaaaag
     1081 atgagttatt gtttattttt aatgtaagat ttaaatattt tgatttttca atgtttagcc
     1141 tattgaaaga taaacttaga ccactactaa aaaatacaag ctttgaaaaa gaaattaaag
     1201 agcttttatc agttttagaa gttcataaaa aaagcttttt agaaaataag gtttttacaa
     1261 agaaagagca aaaaaggatt attcttttaa atgcttgtaa ggcaacttat gaagctttaa
     1321 aacacaaatt aaagacttaa aatgagtata agccttttta atgatgaaat aaaggcgtat
     1381 ataaaaaatt attattctat agttgatttt ttatatttac gctatggttt ggagtttgat
     1441 aaacaaggaa atgaaaagca caataaaagc cttaaaataa aaactaacac ttgcttgatt
     1501 actgatttta acggaagttt tagtggagat ataatcgatt ttatagcctt taaagaaaat
     1561 gtagggttaa aagaagcttt gattatattt agtgatttta acaggttacc cacgcaaaag
     1621 gtgggtagct ttaaaccaca aaaagagcct ttaaaagata atagctattt aaaaaatata
     1681 gcttattctt tacaggctaa ttttaattta gctaatagcg attttataga atgtaaggct
     1741 ttagaaaaag ctttttttaa tgattttaga ctttttatgc acttatgtaa attaaatttt
     1801 ttaaaagatg atgagtttga aagtatttta aaagattatt ttgctttttc aaaagatgat
     1861 aaaagtttgg cttttatctt gaaagataaa aacgaaatta aaagcgtggc tattagagaa
     1921 aagcttttta aaaatgaatt agtcaaatgg tttaaagtta aaggtagtag caataaattt
     1981 ataaaactta taaaagccaa agaaaaaggc ttattaaaag attattgttt tatctttagt
     2041 ggcataaaag aaattatagt aagtgaattg ctaggattaa acgctgtttg ttttcaaagt
     2101 gatagcatga tgaaaaatat acactcacac gagcaaataa atgagctttt aaacctcatc
     2161 gataataaaa gaatagtttt tatagttgaa aacgatgaga gcagttttaa agctaattta
     2221 gagcttttaa aagaattaat acaaataaat cctttgaaaa aaggctattg tgtttttaat
     2281 tatgatgagg taaaaaacgc tgattttata gattttttag cttatttaat gaaagagtta
     2341 agacaagact accaaagaga taaaaaaggt ttaaatagtt ttttttctta tatggaaaaa
     2401 tactttaaga attattttaa taaaaaaata aatttatttt taaaggtaaa aaaatgaaag
     2461 attatagtaa agaaattaat gatttaaaaa aaataaaaag ccaagatata gataaacttg
     2521 actttaaaga atttgaaaat attaaaagta aaataaatga aacaagttgc aaccctagta
     2581 aaattatatc acaaaaaaat gcaaatataa aaaataattc ttttgtagat ttaacacaat
     2641 gggctataag aagcgttgat ttagaaaaaa tagaatttac atctttaatc gatgattttt
     2701 tggataaagg gagtattagt tttttaacaa gtgaagctaa taagggtaaa acttttttaa
     2761 gttttgctat ttgcaagcat ttattagaat ttaacaagat tagaaaaatt atttattttg
     2821 atggtgataa tagcaaaata accattaaaa gcaggattaa aaaaagtatg caaatagggg
     2881 gatattattt tttagattat cctggtttta attatataca aacaagcaat gctttagagt
     2941 gtggaactga tgagatagaa gttgatttta actttattat tgaaaaatat ctagaacctt
     3001 taatgcaaag cggtggtttg gttaatgttt ttatcgtatt tgatagcctt tttaactttt
     3061 ttaatggtga tatgaatgat aataaaaaag tagctgaatt tatgaaaata attaaaaaaa
     3121 taagtcataa aggcgaagct acttttttat ttatacatca caagggaaag agtgctgaaa
     3181 gtgagttcat gggtggggtt aatttcttaa atgcgactga taaccttttt aaaatacaaa
     3241 caagtaataa cgatggagaa attttaaata tagaattaaa tacaaaaaag gcaagaaatt
     3301 ttttacctta taatttaaag gtagatatag acttaaatac gcttgattta aaaatagaaa
     3361 gagcagtaaa tgaaaacgat acaaactttc ttataaaagc taaagaaatc atagaacaaa
     3421 aaggcgagat tttgcaaggg gagttattag agcttttaga aaaatcaaaa accgatacac
     3481 atgccattaa aaagctagaa agtggaaaag ggttatattt taatataata gaaaaatcaa
     3541 gagcaacggg tggaaaagct ttaaaatatt atgtgccttt aaaagagaat aaaaccatca
     3601 ttaacggcat agaaataaat gccgagcaaa ctttatttag cgaataagta aaaagctatg
     3661 tgagtttaat tcatgtagct ttttacttaa ttattatctt atagccatag cttaataaaa
     3721 acactcctaa aatcaaaaaa gtatttttac cgataaaaca accttagaca aaaaataaaa
     3781 acgcttaaaa tcgcttattt taatattagt ttatttttat acttttta
//
LOCUS       DAQUWA010000111         3680 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.111, whole genome shotgun sequence.
ACCESSION   DAQUWA010000111 DAQUWA010000000
VERSION     DAQUWA010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3680
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.111"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(212..712)
                     /locus_tag="R8X70_001810"
     CDS             complement(212..712)
                     /locus_tag="R8X70_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929558.1"
                     /translation="MKNELDVFKKHLGEIQGVSEFKATQICSQINDANDFIGALQILD
                     LTLKKIEKSITERLDEQNDDLQKRTLDATSSQLIQNCSFMGTALFGNIFNVYVGQKLF
                     EFEISNPLLVLEKAGYEGVLAYIQDKRDEIKDILCKLSSAITMGISMDNMNFSDSATN
                     FKNLFR"
     gene            complement(764..1366)
                     /locus_tag="R8X70_001811"
     CDS             complement(764..1366)
                     /locus_tag="R8X70_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEF2929559.1"
                     /translation="MKKFIYITILAFIFNGCSIPTSTLDKTQSFILKNDELPLQANFI
                     KSDKILKIQNASLPLYLHSRSIIYVQKGISKAYAYHFWADLPNNLYQSLLLSKFEQSQ
                     IFKALLSQGSSVGSDYILESRIDSFEQVVDENENYVSISISINFIDAKESKIIAHRLF
                     SIKERVKKIDIFDVYQSFEKALNSLGNEIVLWINATLDEK"
     gene            complement(1363..2259)
                     /locus_tag="R8X70_001812"
     CDS             complement(1363..2259)
                     /locus_tag="R8X70_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HEF2929560.1"
                     /translation="MENKANYFFVGLFVFGVFFASIGFMLWLGGYSKEESFEYYEIHT
                     QESVAGLGIKAPVRLLGVEIGNVENISIYDKENLGVNILIKIKKGTPIKEDTFATLQF
                     QGITGLKFVQLQGGSKNSPKLQVKGKEEFPVIQFKEGFFAAIDRQSEHIFSLIKRADD
                     KSKELFSDKNIKNLEILLDNLAQLSTTLNKDSKTLNHNIANTSLKLGEMAENVSLSAK
                     GFNASLKDIQEGALALSSFAKKANVKLDSYDDLRLSLAENLELLKKVLIESNILIQNL
                     QKSPSDLIFKETKPKLGPGEKQ"
     gene            complement(2262..2984)
                     /locus_tag="R8X70_001813"
     CDS             complement(2262..2984)
                     /locus_tag="R8X70_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEF2929561.1"
                     /translation="MIIKAQNIITRFGNKVVHDGVSFEINKNEIFGILGGSGNGKSVL
                     LKQMLMLEHFDEGEYEILGFKLKNISEEDALALRKKWGVVFQFSALFSFFSVYENIAI
                     PLKEYTNLDSIAIKELVLMKLKMVGLNEAVLKQLPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLILELKQSFDLNIVLVTHDKESMKNLLERFIILEDKKV
                     AFCGNYEELRVQNERLFKRFME"
     gene            complement(2985..>3680)
                     /locus_tag="R8X70_001814"
     CDS             complement(2985..>3680)
                     /locus_tag="R8X70_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEF2929562.1"
                     /translation="LCIKNPKNFRFISFLYHIENSAFKALPIVILTALLVGVVLAYQA
                     AYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEINAM
                     NTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFLRRFR
                     EAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAF
                     DALFSVVLTIMEV"
BASE COUNT         1215 a          649 c          506 g         1310 t
ORIGIN      
        1 ttaaaaatga ttatacctat aaattaaact aaaacataat gtaatatttt agtttaaaga
       61 gatattcaaa gatctcacag gctaggttgc ttccctcccc cttttttcaa cctagcttga
      121 aaaagagcgg aatatctctt taagctaaaa tatgaaaacc tcttaagatt aattttaatg
      181 agtatgttta aagcgataag agttttaact cttatctgaa aagattttta aagtttgttg
      241 cagagtcaga aaaattcata ttatccatgc ttattcccat ggtaatagca cttgataatt
      301 tgcataaaat atctttaatt tcatcccttt tatcttgaat ataagctaaa actccttcat
      361 accctgcttt ttctaaaact aaaagaggat ttgaaatttc aaattcaaaa agtttttgac
      421 ctacatatac attaaaaata tttccaaaaa gtgctgtacc cataaaagag cagttttgga
      481 taagttgaga acttgttgca tctaaggttc ttttttgtaa atcatcgttt tgttcatcaa
      541 gtctttctgt gatacttttt tcaatttttt taagcgttaa atcaagtatt tgcagagcac
      601 cgataaaatc atttgcatca tttatttgtg agcaaatttg tgtagcttta aactcactta
      661 cgccttgtat ttcacccaag tgctttttaa aaacatccaa ttcatttttc attttacacc
      721 tttcaaaaaa tattgctaaa ggtttaaaaa gcaaaaagtg ttcctatttt tcatcaagtg
      781 tggcattgat ccataaaact atttcatttc ctagagaatt taaagctttt tcaaaggatt
      841 gatagacatc aaaaatatct atttttttaa ccctttcttt gattgaaaac aggcgatgag
      901 cgatgatttt actttctttt gcgtcgatga aatttatact aatagaaatg cttacataat
      961 tttcattttc atcaaccact tgttcaaaag aatctatcct gctttcaagt atataatcac
     1021 ttcccacaga gcttccttgg gaaagcaggg ctttaaagat ttgactttgt tcaaatttgg
     1081 atagcagcaa ggattgataa agattattgg gtaaatctgc ccaaaaatga tacgcataag
     1141 ccttgcttat acctttttgc acataaataa ttgatcttga atgaagatat aaaggcaagg
     1201 acgcattttg aattttaaga attttatcgc ttttaataaa attggcttga agaggaagtt
     1261 catcattttt aagtataaag ctttgcgttt tatcaagagt gctagttgga attgaacatc
     1321 cattaaatat aaaggctaag atagtaatgt atatgaattt tttcattgtt tttctcctgg
     1381 tcctagtttg ggtttagttt ctttaaaaat taaatccgat ggactttttt gtagattttg
     1441 tatcaagata ttgctttcta taagcacttt tttcaaaagt tctaaatttt ctgctaagga
     1501 aagtcgtaag tcatcgtaag aatcaagttt aacattggct ttttttgcaa aagagctaag
     1561 cgctaaagct ccttcttgga tatcctttaa acttgcatta aaaccttttg cacttaagct
     1621 tacattctct gccatttctc caagttttaa gctagtgttt gcgatattgt gatttaatgt
     1681 tttagaatct ttatttaaag tggtgcttag ttgtgctaaa ttatctaaaa gtatttctaa
     1741 attttttata tttttatcac taaaaagctc ttttgattta tcatctgctc tttttatcaa
     1801 agaaaagatg tgctcgcttt gtctatctat agcagcaaaa aaaccttctt taaattgaat
     1861 cacgggaaat tcttctttac cttttacttg aagttttgga ctgtttttag aacctccttg
     1921 aagttgtaca aatttaagtc ctgtaatgcc ttgaaattgc aaagttgcaa aagtatcttc
     1981 ttttataggg gttccttttt tgattttaat taaaatattt acccctaaat tttctttatc
     2041 ataaatactg atattttcca catttcctat ctctactcct aaaagcctta caggagcttt
     2101 gattccaagg cctgcaacag attcttgtgt atgaatttca tagtattcaa aactttcttc
     2161 ttttgagtat cctccaagcc aaagcatgaa accaatacta gcaaaaaaaa ctccaaaaac
     2221 aaaaagccct acaaaaaaat aatttgcttt attttccact tttactccat aaatctttta
     2281 aacaatcttt cattttgcac ccttagctcc tcataatttc cacaaaaggc aactttttta
     2341 tcttctaaga tgataaaacg ctcgagcaga tttttcatac tttctttatc gtgtgttact
     2401 aaaacaatat taagatcaaa gctttgttta agttctagta tcaaatcatc aaattcacga
     2461 ctactatgcg gatcaagtcc agaagtaggc tcgtctaaaa aaagtaattt actatcaaga
     2521 gccaaagccc tagcaatagc aactcttttt tgcattccgc cacttagctc gcttggaagc
     2581 tgttttaaaa cagcttcatt taaaccgacc attttgagtt tcatcaatac cagttctttt
     2641 atagcaatgg aatctaaatt cgtatattct ttaagaggga tagctatatt ttcataaacg
     2701 ctaaaaaagc taaagagtgc agaaaactga aatactacac cccatttttt acgcagcgct
     2761 aaagcatctt cctcgctaat gttttttagc ttaaagccta aaatttcgta ttctccctca
     2821 tcaaaatgtt caagcattag catttgtttt aagagtacag acttgccatt tccacttcct
     2881 cctaaaatcc caaaaatttc gtttttgtta atttcaaaac tgactccatc atggacaact
     2941 ttatttccaa atcgggtgat aatattttgc gcttttataa tcatttaaac ttccattata
     3001 gttaaaacca cagaaaataa agcatcaaat gctattaccc aaaatatagc atttacaaca
     3061 ctttttgtag tataaattcc tatactttga gtggtatttt taacctcaaa tccccgaaaa
     3121 caagcaataa gtcctattaa aaaaccaaaa ataggagctt ttgcaagccc tatgatgata
     3181 tgtttcattt ccacagcttc cctaaagcgc cttaaaaatt ctccaaagga tatatcaaga
     3241 tttatttttg ctactaccat tcctcctaat atactgatcg catcacttag agcaacgatt
     3301 aaaggcatgg caataactaa agccatgacc cgcggaatga tgatgaattc aaaagagcga
     3361 aagcccatgg tattcatagc attgatctca tctgtgattt tcatgacccc aatttgtgcc
     3421 gtataagagc ttgcacttct acctgctatg actatcgcgg cgattaaagg agcaagttct
     3481 ctagtggctg aaattcctac taaatctact atgaaaatat tagctccaaa ttgtgcaagc
     3541 tgataagcag cttgatatgc aagcacaacc ccgactaaaa gagcggttaa aataacaata
     3601 ggcaaggctt taaaagctga attttcaata tgatataaaa aagatataaa gcggaaattt
     3661 ttaggatttt ttatacataa
//
LOCUS       DAQUWA010000112         3655 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.112, whole genome shotgun sequence.
ACCESSION   DAQUWA010000112 DAQUWA010000000
VERSION     DAQUWA010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3655
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.112"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..1504
                     /locus_tag="R8X70_001815"
     CDS             <1..1504
                     /locus_tag="R8X70_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HEF2929563.1"
                     /translation="AFELLQIIYKKMLKLKFLIGIRIFDFKKELIRICNKHKKNTLNK
                     TLQINVAKGVEPIQSQDEALVLLYKEKAKDYTIDEKRSGIIAVDENEVVLRYNKFKQG
                     KEGKDLNLHTLKVIDANQNKIKFNCSSLAFKTVEYEDYTEYLALKKGYVVEDQDKFDI
                     ANLLEFNNKVDFKNIGIIRAGLDKNVKINIKFISDMQDAVNSGVGIECEELNITGSVG
                     SNTNLKATRMRVEGTTHTKSKIYAKEAYIKTHRGFAQADKLNIDLLEGGNIKAKEVRI
                     KKSLGGVIEADRIYIEQLESNNSCVFYNNVVIERFEGENNKFHTKIKKMDKDYDQELL
                     KIKNEISSLHHKISKLKQYILSNKNNVLDIEKKVLELKNQGQNIPSQYEKFLKNFSIQ
                     NANLNKLQNQEKELLEYRKKIHDELLALEEDLFKAKFINKSGKWSDMNEIRFSLLEPK
                     EDIFYSSSTKESAKFIALKKIIQNNQEYIEIDKKLDYEEKDIEWLLPSKE"
     gene            1480..2031
                     /gene="ruvA"
                     /locus_tag="R8X70_001816"
     CDS             1480..2031
                     /gene="ruvA"
                     /locus_tag="R8X70_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEF2929564.1"
                     /translation="MVVAIEGIITKKEPTFAIIKCASGLSYGVFISLFCAAKLETHQK
                     YELFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGASTAMAICSSLDVNSFYKAL
                     NLGDESVLKKVPGIGPKSAKRIIVELGDAKVQLESVSDDKSEALAALLSLGFKQDKIL
                     SVLSTCNGKDTSELIKEALKKLA"
     gene            2041..3081
                     /locus_tag="R8X70_001817"
     CDS             2041..3081
                     /locus_tag="R8X70_001817"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEF2929565.1"
                     /translation="MKLAILFGGNSYEHEISIVSAVVLKKVINTDLTFIFCDEKRRFY
                     LIPSEKMNSKTFSGGAYQKEKELFLRQKAFYHKSLWSEKNLDLDCVINLIHGRDGEDG
                     KIASLLEFFDIKFIGPRVEASVLSFNKEFTKLYAQSVGVKTLDYQMLRKSQKQDFTAH
                     FPCILKPARLGSSIGISIAKNEKELDYAKDVGFEFDTDILVEDFKSDIKEYNLAGCMI
                     KDEFIFSIIEEPKKKEFLDFEQKYLSFSGHNELIEADLSEELKQKLKDNFAKIYNPLF
                     KGALIRCDFFILDNEVYLNEINPNPGSLANYLFKDFNKIIEQLALSIESEKKIKITYE
                     FLHSINGQKGKL"
     gene            3141..3356
                     /locus_tag="R8X70_001818"
     CDS             3141..3356
                     /locus_tag="R8X70_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEF2929566.1"
                     /translation="MLSFKQDEIYTATEVVRNFSPLIEKLKKSESGKMLILKNNKFEA
                     VLLSMKEFERLQNAMQLLENIYKNQKV"
     gene            3358..>3655
                     /locus_tag="R8X70_001819"
     CDS             3358..>3655
                     /locus_tag="R8X70_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEF2929567.1"
                     /translation="MALVNVIYNNDTYELSYEILNQDKKKSLLILHGWGANKELMKQA
                     FSKNLNDFCQIYLDLPGFGNSSAPKSLYSQDYVNIIKEFLKEKKLDIDIFLGHSF"
BASE COUNT         1472 a          470 c          622 g         1091 t
ORIGIN      
        1 agcttttgaa cttttgcaaa ttatctacaa aaaaatgtta aagcttaagt ttttaatagg
       61 cattcgtatc tttgatttta aaaaagaact catccgtata tgcaataaac acaagaaaaa
      121 tactttaaat aaaaccttgc aaatcaatgt agccaaaggt gttgaaccta tacaaagcca
      181 agatgaagcc ttagttttgc tttataaaga aaaggctaaa gattatacta tagatgaaaa
      241 acgctcgggt attatagcag ttgatgaaaa tgaagttgta ttaagatata acaaattcaa
      301 gcaaggcaaa gaaggaaaag acttaaattt acatacttta aaagttatag atgctaatca
      361 aaacaaaatc aaatttaact gctcctcatt agcatttaag actgtagaat acgaagatta
      421 cacagaatat ttggcgctaa aaaagggtta tgtagttgaa gatcaagata aatttgatat
      481 tgcaaacttg cttgaattta ataataaagt tgattttaaa aatataggca taatccgcgc
      541 aggattggat aaaaatgtaa aaataaatat caaatttata tccgatatgc aagatgctgt
      601 taattcaggt gtaggaatag aatgcgaaga actcaatatc acaggaagcg ttggaagcaa
      661 tacaaattta aaagctacaa gaatgagagt tgaaggcacc acgcacacaa aatctaaaat
      721 ttatgccaaa gaagcctata taaaaacaca tcgcggtttt gctcaagcag acaaactaaa
      781 catagatctc ttagagggtg gcaatataaa agccaaggaa gtaaggatta aaaaaagctt
      841 aggtggagtg atagaagcag atagaattta tatagaacaa ttagaaagca ataattcatg
      901 tgtgttttac aataatgttg tcatagaacg ctttgaaggt gaaaataata aatttcatac
      961 taaaataaaa aaaatggata aagactacga tcaagaactt ttaaaaataa agaatgaaat
     1021 ttcatctctt catcataaaa taagcaaact caaacaatac attctatcaa acaaaaacaa
     1081 tgttttagat atagaaaaaa aagtcttaga gcttaaaaat caaggacaaa atataccaag
     1141 ccaatatgaa aaatttttaa aaaatttctc tatacaaaat gcaaacttaa ataaacttca
     1201 aaaccaagaa aaagaacttt tagaatatag aaaaaaaatc cacgatgagc ttttagcact
     1261 agaagaggat ttatttaaag ctaaatttat caacaaaagt ggaaaatgga gcgatatgaa
     1321 tgaaatcaga ttttcgcttt tagaacctaa agaagatatt ttttattctt cttccactaa
     1381 agaaagtgca aaatttatag ctttgaaaaa aatcatacaa aataatcaag aatatataga
     1441 gattgataaa aaacttgact atgaagaaaa ggatatagaa tggttgttgc catcgaagga
     1501 ataatcacaa aaaaagaacc cacttttgct atcataaaat gcgctagtgg tttaagctat
     1561 ggggttttta tctcactttt ttgtgctgct aagcttgaaa ctcatcaaaa atacgagctt
     1621 ttcatcactc aaatcatcaa agaggattct aacaaattct atggtttttt agataaagat
     1681 gagcaaaaaa tgtttgaaat gcttttaaaa gtaaatggag tgggcgcaag cactgcgatg
     1741 gctatatgct caagtttgga tgtaaattct ttttataagg ctttaaattt gggagatgag
     1801 agtgtgctta aaaaagttcc aggcattggt ccaaaaagcg ccaaacgcat catcgtagaa
     1861 cttggagatg ccaaagtcca actcgaaagc gtgagcgatg ataaaagcga agccttggct
     1921 gctttgcttt ctttgggatt taaacaagat aaaatattaa gcgttttaag tacttgcaac
     1981 ggaaaagata caagcgaact tatcaaagaa gcactaaaaa aactagcata aggaaaaata
     2041 atgaaattag cgatactttt tggcggaaat tcttacgaac atgaaatcag cattgtaagt
     2101 gctgtggtat taaaaaaagt gataaatacg gatttgacat ttattttttg cgatgaaaaa
     2161 aggagatttt atttaattcc tagcgaaaaa atgaattcta aaacctttag cggtggtgct
     2221 taccaaaaag aaaaggagtt atttttaaga caaaaggctt tttatcataa aagtctatgg
     2281 agtgaaaaaa acttagattt agattgtgtg atcaacctca tccacggaag agatggagaa
     2341 gacggaaaga tagcttcttt gcttgaattt tttgatatca aattcatagg tcctagggtt
     2401 gaagcaagtg ttttatcttt caataaagag ttcacaaaac tttacgcaca aagcgttggg
     2461 gttaaaactc tagattatca aatgcttaga aaaagtcaaa agcaagattt tacagctcat
     2521 tttccttgca ttttaaagcc tgcacgactt gggagcagta tagggatcag catagctaaa
     2581 aatgaaaagg aattggatta tgctaaggat gtgggttttg agtttgatac tgatattttg
     2641 gtagaggatt ttaaaagtga catcaaagag tacaatcttg caggatgtat gatcaaagat
     2701 gaatttatct tttcaatcat cgaagaacca aagaaaaaag aatttttgga ttttgagcaa
     2761 aaatatctta gtttttcagg ccataacgaa cttattgaag ctgatttgag cgaagaatta
     2821 aagcaaaagc ttaaagataa ttttgccaaa atttataatc ctttatttaa aggtgcttta
     2881 atccgttgtg attttttcat cctagataat gaagtttatc tgaatgaaat caatccaaat
     2941 ccaggctctt tagcaaatta tcttttcaaa gattttaaca aaattataga gcaacttgct
     3001 ctaagtatag aaagcgaaaa gaagattaaa atcacttatg aatttttaca ttctattaat
     3061 ggacaaaaag gcaaattata aagctttaag agaaagtatg ttaaatttta cataaaattt
     3121 tatgtatttt aggaaaattt atgctttctt ttaaacaaga tgaaatctat accgccacag
     3181 aagttgtgcg aaactttagt cctttgatcg aaaaactaaa aaaaagcgaa tcgggcaaaa
     3241 tgctcatctt aaaaaataat aaatttgagg ccgttttgct cagtatgaaa gaatttgaac
     3301 gcttgcaaaa tgctatgcaa ctcttagaaa atatttacaa aaaccaaaag gtttaagatg
     3361 gcgcttgtaa atgtgattta taataatgat acttatgaat taagttatga aattttaaat
     3421 caagataaga aaaaatcttt actcatattg catggatggg gtgcaaataa ggagcttatg
     3481 aagcaagctt tttctaaaaa tttaaatgat ttttgtcaaa tttatctaga tttacctggt
     3541 tttggaaatt caagtgcgcc aaaaagtctt tatagtcaag attatgtaaa tatcataaaa
     3601 gaatttttaa aagaaaaaaa acttgatatt gatatttttc taggacattc ttttg
//
LOCUS       DAQUWA010000113         3506 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.113, whole genome shotgun sequence.
ACCESSION   DAQUWA010000113 DAQUWA010000000
VERSION     DAQUWA010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.113"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            1..2031
                     /locus_tag="R8X70_001820"
     CDS             1..2031
                     /locus_tag="R8X70_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEF2929568.1"
                     /translation="MPLSRLNEEQYLAATANFGHNLIIASAGTGKTSTIVARISYLLS
                     QGVSPQKIMLLTFTNKASKEMISRLGKYFDKNITGKILAGTFHSTAYTLLKSANKDVV
                     LKQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDIYSLFQNKAYDQDFYHWFCVNY
                     EDQSIYAEIYEDILKEYSEEKKRFNYVDFNDLLLNLKTLLNEKKYEFDEILVDEYQDT
                     NALQSSLIEAFESKSLFCVGDYDQSIYAFNGADINIIGGFKQRFKDAQIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRKDEFKAPSLLTFEELFDQYQNIAKMILTSGV
                     SLEEIAVIFRNNSSADGIEVALREQGIASVRKGSGSFFESLEVKAFSAMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGSLIRGFLEPDKSVNLQNHQKRNYQLG
                     LFADLEELASENRFKFESEFNAHPILKLSKINDLCAKNLEKIYFFLKKAMETKHSLVL
                     VNLICENSFYKEICEELAIKRATNKAGQVDLLRKKENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSNGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMSMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTAFTPSCFLIEAGLCKGELTID"
     gene            2079..2816
                     /locus_tag="R8X70_001821"
     CDS             2079..2816
                     /locus_tag="R8X70_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEF2929569.1"
                     /translation="MKKYLFLSLVAASFLNAEVLVYGPGGPAPVMKELALKFEEKTKE
                     KVVVTAGPTSSWFKKARKDADLIFSGNTSMMDGFIKRIPSLNLEDLVVLNARPSGIIV
                     RPNNPKNIKSFEDILKDNVNVMVVDGAGQVGLYEDMALKDGKRENLVKLRKNIKVYAK
                     NSKIAIDEWNNNPNIDALIIWSHWAKVLGDKALFIEDEKAAVYRTAEIIPTKKGLQNK
                     QALEFVKFIQSKEAQKIWKKHAWNEVE"
     gene            2925..3452
                     /gene="tpx"
                     /locus_tag="R8X70_001822"
     CDS             2925..3452
                     /gene="tpx"
                     /locus_tag="R8X70_001822"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HEF2929570.1"
                     /translation="MSSVNFKGNPVKLKGNSVEVGADAPKVGLKAKDLSTIEIGAAGK
                     TQIVLSLPSLDTPVCATEAREFNKKVASYNGAEVVVVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLIGEGPLEGLLARAVFVIKDGKIAYKELVSEVTEMPDIAKLD
                     AFFGGSSCCGGCGCH"
BASE COUNT         1262 a          445 c          693 g         1106 t
ORIGIN      
        1 atgccacttt ctagattaaa tgaagagcag tatttagctg ctactgcaaa ttttggacac
       61 aatctgatca tagcaagcgc ggggacggga aaaacttcta ccatagttgc aagaatttct
      121 tatcttttaa gccaaggtgt atcgccgcaa aaaatcatgc ttttgacttt tactaataaa
      181 gccagtaaag aaatgataag ccgtttgggg aaatattttg acaaaaatat tacaggaaaa
      241 attttagcag gaacttttca tagcacagcc tataccttgc ttaaaagcgc aaataaagat
      301 gtggttttaa aacaggccag tgagttaaaa accctactta aaagtgttta tgaaaaaaga
      361 acctttagac atttaagtga tataaaacct tatcagtcaa gctatttata tgatatatat
      421 tctttatttc aaaacaaggc ttatgatcaa gatttttacc attggttttg cgtaaattat
      481 gaagatcaaa gtatttatgc agaaatttat gaagatatat taaaagaata cagtgaagaa
      541 aaaaagcgtt ttaattatgt agattttaac gatttacttt tgaatttaaa aactctttta
      601 aatgaaaaaa aatacgaatt tgatgaaatt ttggtagatg aatatcaaga tactaatgcg
      661 cttcagagtt ctttaatcga ggcttttgag agtaagagct tattttgtgt gggggattat
      721 gatcaaagta tttatgcttt taatggtgca gatattaaca taataggtgg atttaagcag
      781 cgttttaagg atgctcaaat tttttctcta aacaaaaact accgttcttc aagaagtatt
      841 ctagctttgg caaataaggt aattttaaac aacgaaagac tctatccaaa ggagcttata
      901 gttacaagaa aagatgaatt taaagcccct tctttactga cttttgaaga attgtttgat
      961 caatatcaaa atatagccaa aatgatactt actagcggag tgagcttgga agaaattgct
     1021 gttatttttc gcaataattc gagtgcagat ggtatcgagg tggccttaag agagcaaggg
     1081 atcgcaagtg tgagaaaagg cagcgggagt ttttttgaaa gcttggaggt taaagccttt
     1141 agtgctatgc ttgctcttgt ggtaaatcct aaggatatca tggcatttat tcatttggtt
     1201 cagtatacca aaggagtagg cggagtttta gcaaaggaaa tttttgatgc tcttttaaaa
     1261 ttaggtcatg gtagcttgat aaggggtttt ttagaacctg ataaaagtgt aaatttgcaa
     1321 aaccatcaaa aaagaaatta ccagcttggg ctttttgcag acttagaaga actagccagt
     1381 gaaaatcgtt ttaaatttga gagtgagttc aatgctcatc ctatcttaaa actttcaaag
     1441 attaatgatt tatgtgctaa aaatttagaa aaaatttatt ttttcttaaa aaaagctatg
     1501 gaaacaaaac attctttagt actggttaat ttaatttgtg aaaattcttt ttataaggaa
     1561 atttgcgaag aattagccat caaaagagcg acaaataaag cagggcaagt ggatctttta
     1621 agaaaaaaag aaaatttaga aaagatagaa acgaaattta atgttttaaa agaactcact
     1681 aaaaattata gcgatattta taagtattat aattttttaa ccctaggtgc aagcgaaatg
     1741 agtaatggca agggtgtaaa tttgcttagc gtgcatgcaa gcaagggttt ggaatttgat
     1801 ttggtatttg tgatcgatct tgcacaaggg cgttttccta atcaaaaact catgagcatg
     1861 ggcggaagct tggaagaaga aagaaggctg ttttatgttg cggtaacaag ggctaaaaat
     1921 atactttatc ttagctatgc aaaatacgac aaaaataaaa aaactgcttt tacaccttcg
     1981 tgttttctta tagaagcagg gctttgcaag ggagagttaa ccatagattg ataacatttt
     2041 ctttcaaaat aaatatcatt gaaagaaagg tttaaaatat gaaaaaatat ttatttttaa
     2101 gtttagtcgc agcaagtttt ttaaatgctg aagttttagt ttatggtcct ggcggtcctg
     2161 cgccggttat gaaagaacta gcattgaaat ttgaagaaaa aactaaagaa aaagttgtag
     2221 tgactgcagg tcctacctca tcgtggttta aaaaggctag aaaagatgcg gatttgattt
     2281 tttcgggtaa tacttctatg atggatggat ttatcaaaag aattcctagc ttgaatttag
     2341 aagatttggt tgttttaaat gcccgtcctt caggtatcat cgtgcgtcct aataacccaa
     2401 aaaatatcaa aagttttgag gatattttaa aagataatgt aaatgttatg gttgttgatg
     2461 gtgcaggtca agttggactt tatgaggata tggctttaaa agatggtaaa agagaaaatt
     2521 tggtcaagtt gcgtaaaaat attaaagttt atgctaaaaa ttctaaaata gctatagatg
     2581 agtggaacaa caatccaaac atagacgctt taattatttg gtcgcattgg gctaaggttt
     2641 taggagataa ggctttgttt atcgaagatg aaaaagcagc agtttatcgc acagctgaaa
     2701 tcattcctac caaaaaagga cttcaaaata aacaagcttt agaatttgtg aaatttattc
     2761 aaagtaaaga agcccaaaaa atttggaaaa aacatgcttg gaatgaagtt gagtgatttt
     2821 aagctgagta tttaaagaat taataataat tattaagata taataatttt cgaaacatta
     2881 aaattacaaa aatgtttcaa tttataaaaa taaaggatga caaaatgagt tcagtaaatt
     2941 ttaaaggaaa cccagtaaaa cttaaaggaa attcagtaga agttggagca gatgctccta
     3001 aagtaggact taaggctaaa gatttaagca cgattgaaat tggtgctgca ggtaaaacac
     3061 aaattgtttt aagtcttcca agcttagata ctccagtttg cgcaactgaa gcaagagaat
     3121 ttaacaaaaa agtagcaagc tacaatggag ctgaagttgt agttgtaagt atggatttac
     3181 cttttgctat gggtagattt tgcagtactg aaggtataga aaatctaagt gttgctagcg
     3241 attttgtagc aaaagaattt ggagaaaaat atggcgtttt aattggtgaa ggtccactag
     3301 aaggtctttt agctcgtgct gtatttgtaa tcaaagatgg taaaatcgct tataaagaat
     3361 tagtaagtga agtgacagaa atgccagata ttgcaaaact tgatgcattt tttggtggct
     3421 ctagctgctg cggcggatgc ggttgtcatt aattttctac atataaagcc ccccccccaa
     3481 tggggctact ttcttagctt ttcaaa
//
LOCUS       DAQUWA010000114         3444 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.114, whole genome shotgun sequence.
ACCESSION   DAQUWA010000114 DAQUWA010000000
VERSION     DAQUWA010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3444
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.114"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            50..1021
                     /gene="legB"
                     /locus_tag="R8X70_001823"
     CDS             50..1021
                     /gene="legB"
                     /locus_tag="R8X70_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HEF2929571.1"
                     /translation="MRNILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLE
                     KSPFLKDMEVISGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGT
                     LNMLEAAKKNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSY
                     YNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDT
                     CEGFISLLNLKHFGEVYNIGSGVEYSMQEVLDLIQKILDSKVKIIQDEQRLRPKNSEV
                     FRLCCDANKLKKATNWQSKISLEEGLRQSIEYFKENLENYKSELYNV"
     gene            1014..2168
                     /gene="legC"
                     /locus_tag="R8X70_001824"
     CDS             1014..2168
                     /gene="legC"
                     /locus_tag="R8X70_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase LegC"
                     /protein_id="HEF2929572.1"
                     /translation="MFEKEISFIKSLFNKENIALHEPCFIGNEKKYLLECIDSGFVSS
                     VGEFVTRFEEALKEKTKARFVIATNTGTAALHIALLANGIDENCEVITQSISFVATAN
                     AIAYTGAKPVFLDIDENTLSLSPKALEHFLENQTYQKDNLSYNKTTHKPIKACVIMHT
                     FGLSAHIKAIKELCEKYHILLIEDAAEALGSTYENKALGTFGKCGILSFNGNKIITGG
                     CGGAILSDDENLAKLARHLSTTAKIPHPYEYDHDRIAYNYRLCNINAAILFAGLENLE
                     LFLENKRELAKIYKDFFKNHDKCKFIDEKSNEKSNFWLNTLLFKNENLRNIFLEECLK
                     NNIFVRPVWKSLPSLKAFQNCQSNELINTKKLEKRLINLPSSVRIANKKE"
     gene            2277..2579
                     /locus_tag="R8X70_001825"
     CDS             2277..2579
                     /locus_tag="R8X70_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929573.1"
                     /translation="MKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENNFFDLKYL
                     GNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKNHVILSLLYILNLLFQKKLK"
     gene            2594..2821
                     /locus_tag="R8X70_001826"
     CDS             2594..2821
                     /locus_tag="R8X70_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferase"
                     /protein_id="HEF2929574.1"
                     /translation="MCPFATINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLN
                     GNSSIGKNCFLATRVSLLPCVNLEDNCIVSR"
     gene            2894..3211
                     /locus_tag="R8X70_001827"
     CDS             2894..3211
                     /locus_tag="R8X70_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEF2929575.1"
                     /translation="MKEINIIDFGLMGKQISALFYLLGYEIGVYNKSKLNIYEFEKQI
                     KLLQRKIDFSNFNAGKINIYQHIEDLKNSLTIESLNEDLNLKKEIMQILRDNNIVFRI
                     QVL"
     gene            3214..>3444
                     /locus_tag="R8X70_001828"
     CDS             3214..>3444
                     /locus_tag="R8X70_001828"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929576.1"
                     /translation="MDDLNCDFIHFFNTIYIKLIELCGSNLERFTPLKDLKKLGFHII
                     CSKGNRGALANLLLFNEISSFFKIIEKYDYNFK"
BASE COUNT         1309 a          497 c          569 g         1069 t
ORIGIN      
        1 aaaaacttaa agaaagaaaa ttagataaat ggatggaaag ggtgagaagg tgagaaatat
       61 tttagttaca ggtgctgatg gttttatagg ttctcatctt tgtgaaagtt tggtcaaaaa
      121 aggttttaaa gtcagagctt taagccaata taattctttt aatttttggg gacatttaga
      181 aaaaagtcct tttttaaaag acatggaagt tataagcggg gatttaagag atagcttttt
      241 ttgcgaaaaa attaccaaaa acatagatgc gatctttcat cttggcgctt taatcgctat
      301 cccctactcc tacacagccc cacaaagcta tgtggatacc aatgtcaatg gcactttaaa
      361 tatgctcgaa gcagctaaaa aaaacgagat ttcacatttt atccacacct caacaagcga
      421 agtttatggc acagcctttt atgtacctat cgatgaaaaa caccctttac aacctcaaag
      481 cccttattct gcaagcaaaa tcgctgcaga tatgatggcg ctgagttatt ataattcttt
      541 taatttaaat gtcaatattg cacgcccttt taacacctat ggaccaagac aaagcgcaag
      601 ggctatcata cctaccatca tcacacaaat tttaagtgga gcaaaggaaa tcaaactagg
      661 agatttaagc cctaaaaggg atttaaattt tgtgctagat acttgcgagg gttttatctc
      721 tcttttaaat ttaaaacatt ttggagaagt ttataatata ggctcaggag tggaatactc
      781 catgcaagaa gtacttgatc tcatacaaaa aattttagat tctaaagtaa aaatcatcca
      841 agatgaacaa agattgcgtc ctaaaaatag cgaagttttt agactttgtt gcgatgcaaa
      901 caagcttaaa aaagctacaa attggcaaag caaaataagt ctagaagaag gcttgagaca
      961 aagcatagag tattttaaag aaaatttaga aaattataaa agtgagcttt ataatgtttg
     1021 aaaaagaaat ttcttttata aaaagtcttt ttaataaaga aaatatcgcc ctacatgagc
     1081 cttgttttat aggcaatgag aaaaaatatc ttttagagtg cattgatagc ggttttgttt
     1141 caagcgtggg agaatttgta acgcgttttg aagaagcttt aaaagaaaaa accaaagcac
     1201 gctttgttat cgctacaaat acaggcacag cagcccttca tatcgcttta ctagctaatg
     1261 gtatcgatga aaactgcgaa gtcatcactc aaagcataag ctttgtcgct acggccaatg
     1321 ctatcgctta tacaggtgca aaacccgttt ttttagatat agatgaaaac actctaagtt
     1381 taagtcctaa ggctttagag cattttttag aaaatcaaac ttatcaaaaa gataatctta
     1441 gctataacaa aaccacacac aaacccatca aagcttgtgt tattatgcac acctttggtt
     1501 taagcgctca tataaaagcc atcaaagagc tttgtgaaaa ataccacatc cttttaattg
     1561 aagatgctgc agaagcctta ggaagcacct atgaaaacaa ggccttaggc acttttggaa
     1621 agtgtggaat tttaagcttt aatggcaata aaatcatcac aggtggatgc ggtggggcga
     1681 tattaagtga tgatgaaaat ttagccaaac ttgcaagaca ccttagcacc acagctaaaa
     1741 tcccccatcc ttacgaatac gatcatgata ggatagctta taattaccgt ctttgcaata
     1801 taaacgcagc aatcttgttt gcaggacttg aaaatttaga acttttttta gaaaacaaaa
     1861 gagaacttgc taaaatttac aaggattttt ttaaaaatca cgataaatgt aaatttatcg
     1921 atgaaaaaag caatgaaaaa agcaattttt ggctcaatac cttgcttttt aaaaatgaaa
     1981 atttaagaaa tattttttta gaagaatgct tgaaaaataa tattttcgtc cgtcctgtat
     2041 ggaaaagctt accgagttta aaagcttttc aaaactgtca aagcaatgag cttataaaca
     2101 ctaaaaaatt agaaaaacgc ttgattaatt tacctagtag cgttagaata gcaaataaaa
     2161 aggaatgatg cgttgcaaaa tttaattcaa agcattaaaa aaatttaata agaaaaaata
     2221 tgagaatagc gggggggggg atttgatttt tttacttctt cttttaggag aagtgcgtga
     2281 aaaatgtcat catcatagga gcgggtggct ttgctagaga gctttattct tatttaaaag
     2341 atgcaaatta cgaaattata ggctatattg atatacaaga aaataatttt tttgacttaa
     2401 aatatctagg caatgaagat aatttcgata aaaagttgat tcaaaaagca tcttttgctt
     2461 taggtgtagg acaaatcaat ttaagaaaaa aaatccttgt aaaactttca aaaaaaaatc
     2521 atgtaatttt atcactttta tacatcctca atcttttgtt tcaaaagaag ctaaaatagg
     2581 acaaggggtt atagtgtgtc cttttgcaac cattaatgct aattcaaata taggagattt
     2641 tgtgctttgt aatatttatt caagcatagc tcatgattgt aaggtaggag aaggaagtat
     2701 tttaagccct tatgctacac ttaatggaaa ttcaagcata ggaaaaaatt gttttttagc
     2761 tactagagtt agcctgttgc cttgcgtaaa cttagaagat aactgcatag taagcaggta
     2821 gtattattag caaaaactac acatccaatc aacttatttt tcataaaaat ataattaaaa
     2881 caaggaaaaa acaatgaaag aaattaatat catagacttt ggtttaatgg gtaagcaaat
     2941 aagtgcttta ttttatttat taggctatga aataggtgtt tataataaaa gcaagctcaa
     3001 tatatacgaa tttgaaaaac aaataaaact tctacaaaga aaaatagatt tttctaattt
     3061 taacgccgga aaaataaaca tttaccaaca tatagaagat cttaaaaata gcttgactat
     3121 agaaagctta aatgaagatt taaatttaaa aaaagaaatc atgcaaattc ttagagataa
     3181 taatatagtt tttcgaattc aagttctttg agtatggatg atttaaactg cgattttata
     3241 cattttttca atactattta tatcaaatta atagaacttt gtggttctaa tttagaacga
     3301 tttaccccat tgaaagatct taaaaaatta ggatttcata tcatttgcag taaaggcaat
     3361 cgaggagctt tagcaaattt gcttttgttc aatgaaattt catcattttt taaaattata
     3421 gaaaaatacg attataattt caaa
//
LOCUS       DAQUWA010000115         3345 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.115, whole genome shotgun sequence.
ACCESSION   DAQUWA010000115 DAQUWA010000000
VERSION     DAQUWA010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.115"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            23..2263
                     /locus_tag="R8X70_001829"
     CDS             23..2263
                     /locus_tag="R8X70_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEF2929577.1"
                     /translation="MKLSYHTSKVLMSVSISALLSSAALAQEITIADGDGSMENHFET
                     NDGQHFTLKNDYTNGNLTININNTDIPNSIAKEGYEDLATVNINLGSNDLAIKNISHG
                     DISTYVTNYTINAKKTEAIDVIFQSTNGRSIVNGDFNIKGSSAPTEGVLDDIKSSAIL
                     IGDGYGLQGSLEVNGNFTADQSTLFTVGGNKSQNHIQINGKANITNSNFSIGATSFGD
                     LALNNYVFMSASEGFNEDITNSNKASANISKNFESIVGMSNKDLGLDYEVVRAMDIKD
                     FIEYKLSTKDNKLLISGGANKNVDNNKMILENDKKYLELIKTDLEGAKNEEGTNKEKI
                     DEAIAKIDEQIKQIQDMISNAGDQIISNDDYIKNDSSVSASNKDFVSKILDGLALGKD
                     FNAIGSIKFDKAGEQIANDIKDSAKSISNINQASSGINSTINISNDVSIGSRVAMLNN
                     PYGNYATKLSQMRFAANDYRGNYVDNYENSIWGNVIGGTNIIDGDSSALYGATIGMDR
                     KINDDAIIGAYFTYVNAEIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQISTT
                     DQDITNRGFNTTNSADFNRKFLGLSANMGYVFDFSDNTLFVKPFAGANYYYAYTPSYK
                     ENGIAGKNIDSTSNNSLSLELGTEIRKYMSEESYLFITPKIEQYVMDNGDDFVASLNG
                     VALPSVKSDDKKKTYGQIIIGGNIDISEQFSLNAGIGAKQILAGKTDGKNETYVSGQL
                     GFKYKF"
BASE COUNT         1272 a          418 c          496 g         1159 t
ORIGIN      
        1 taaatttata aggagtaatc aaatgaaact ttcttatcat acaagtaaag ttttaatgag
       61 tgttagcatt agtgctttat taagcagtgc tgctttagct caagaaatta ctattgctga
      121 tggcgatggt agcatggaga atcattttga aacaaacgat ggacaacatt ttactttaaa
      181 aaatgattat accaatggta atctaaccat aaatatcaac aatacagata tacctaatag
      241 tatagcaaaa gaaggctatg aagatcttgc aacagtaaat attaatttag gctctaatga
      301 tcttgctatt aaaaatattt cacatggaga tatttctacc tatgtaacaa attatactat
      361 caatgctaaa aaaaccgaag ctatagatgt tatatttcaa agtacaaatg gaagatctat
      421 cgtaaatgga gattttaaca taaaaggttc atctgctccc acagagggtg ttttagatga
      481 tataaaatct tcagccattt taatcggtga tggatatggc ttacaaggat ctcttgaagt
      541 aaatggaaat tttacagcag atcaatctac tctatttacc gtaggtggca acaaaagtca
      601 aaaccacata caaataaatg gtaaagcaaa tatcacaaat tcaaactttt ccataggagc
      661 aacaagtttt ggagacttag ctttaaataa ttatgttttc atgagtgcaa gcgaaggatt
      721 taatgaagac ataacaaatt caaataaagc tagtgcaaat ataagtaaaa attttgaaag
      781 tattgttggt atgagcaaca aagacttagg gcttgattat gaagttgtaa gagctatgga
      841 tataaaagat tttattgaat ataaactttc tactaaagat aataagcttt taattagcgg
      901 tggtgcaaat aaaaatgtag ataacaacaa aatgattcta gaaaatgata aaaaatatct
      961 agaattaatt aaaactgatt tagaaggtgc caaaaatgaa gaaggtacta ataaagaaaa
     1021 aattgatgaa gctatcgcaa aaattgatga gcaaataaaa caaattcaag atatgattag
     1081 taatgctgga gatcaaataa tctctaacga tgattacatt aaaaacgatt ctagcgtttc
     1141 agcttctaat aaagattttg tttctaaaat tttagatgga cttgcactcg gtaaagactt
     1201 taatgcaata ggtagtatta aatttgacaa agctggagaa caaatagcaa atgacataaa
     1261 agattcagct aaatctatat caaatataaa tcaagcttca tcaggtataa actcaactat
     1321 taatatttca aatgatgtat ccataggttc tcgtgtagct atgttgaata atccttatgg
     1381 aaattatgct acaaaattat ctcaaatgag atttgctgct aacgattata gaggaaatta
     1441 tgtagataat tatgaaaaca gcatttgggg taatgtaata ggtggtacaa acatcataga
     1501 tggagatagc agtgctttat atggagctac tataggtatg gatagaaaaa ttaacgatga
     1561 tgctattata ggtgcttatt ttacttatgt aaatgctgaa ataaaagata atcttttaac
     1621 acaaaaatca gataatttcc aatttggtgc ttattctaac atctatataa gtcctaaagt
     1681 agaagttaat gttaaagctt atgctcaaat ttcaacaaca gatcaagata ttacaaatag
     1741 aggatttaac actacaaata gtgctgattt taatagaaaa tttcttggtt taagtgccaa
     1801 catggggtat gtttttgatt ttagcgataa taccttattt gtcaaacctt ttgccggagc
     1861 aaattactac tatgcataca ctccaagcta caaagaaaat ggaattgcag gaaaaaatat
     1921 tgatagtact agcaacaact ctctttcgtt ggagctaggt actgaaatta gaaaatatat
     1981 gagcgaagaa tcatatttat ttatcactcc aaaaatagaa caatatgtaa tggataacgg
     2041 agatgatttt gtagcgagtt taaacggagt agcattacct agcgtaaaaa gtgatgacaa
     2101 gaaaaaaact tatggacaaa tcattatagg tggcaatatt gatattagcg agcaatttag
     2161 cttaaatgca ggcattggag ctaaacaaat attagccggt aaaacagatg gtaagaatga
     2221 aacttatgta agtggtcaat taggttttaa atataaattc taattaattt ttaagagact
     2281 ctaattcttt aatatgctaa actaaattta accaagaaag atttaaaatc ttgaaaagca
     2341 aagcaaaaga taaattgctt tgctttttgt tttaaaaata tttgaaaata atttttagaa
     2401 ttcatttatt ataaataata aaattactct ttattgtgac ttaatataaa attttgcaat
     2461 ttattctttt taataagcat aggcgataac tcaaaaaact cgtattgata atgagaaaaa
     2521 tcaatattat agtttcttct ctttttaatt ttatctttat ttttttaata tattcatcat
     2581 tagaattttt atccataatg taaactgcac agcaattttc tttttctgcg caaaaatatt
     2641 gcaaataatt tcaaaatcgc ctttattcta caaatgaaaa tcacaagcta tattaataat
     2701 atttggacta aacgatacta tttcaaaata tgaatttgtt atcgtgcttt aaaaaaagac
     2761 ataagaactc tagtaacttg tttttgtcta ctaaataagc aatgattaaa atcagatctt
     2821 ctgaaaatac tatttatttc gtttgatatt aaaatatatt agttacttag cttgttatta
     2881 tttaccttag cttcgtcaaa aaatcaataa aaatatttgt atcaagaaat actttttttc
     2941 atatgtcatt ctctaaagat tatttttcat ttctttaact attttgctcg gataaaaaac
     3001 tccatttaaa gctttgctta gctaatttaa acttttaacc tttgtttagt gcttgttcta
     3061 aagctctaaa gatatttatt cttgttgtcg tatagtcgct gatttttagt actttagaat
     3121 ttaattggct catctttctt gcctaagtct ttgtttttat tccattattc ttactataaa
     3181 ttaaagtaaa tattatgaat aagtaaaaca ttgatagttt agtagttttc tttattcttg
     3241 gttgggatag attttacatt aaaaaccttt ggttattttt ggatttacta gccccatttg
     3301 agttttcatt cttttgattg tatatttttt cttaagttac caaaa
//
LOCUS       DAQUWA010000116         3321 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.116, whole genome shotgun sequence.
ACCESSION   DAQUWA010000116 DAQUWA010000000
VERSION     DAQUWA010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3321
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.116"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            232..615
                     /locus_tag="R8X70_001830"
     CDS             232..615
                     /locus_tag="R8X70_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA transfer protein"
                     /protein_id="HEF2929578.1"
                     /translation="MKKTKQVNIRLTLEEYNLLTEKAQSHGLTLSRYLRDLSMNYPIT
                     CIVDQKVAHDVLNIAGDIGRLGGLFKHWLVRNEDNKVNFSNKRTYNDIDEIVDQILDL
                     QILLKEQAKRIIQNDNQKDSKQKAE"
     gene            578..2734
                     /locus_tag="R8X70_001831"
     CDS             578..2734
                     /locus_tag="R8X70_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HEF2929579.1"
                     /translation="MIIKKIPSKKQNKSSFKNLSNYILDKDNNNAKVLVDYMLDKNNE
                     MDKVEGYHFTNCSFDNDEDNINEIINTQKLNTTTKQDKTLHLVVSFQEDENPTLEILQ
                     AIEEEIAKSLGMEDHQRLSVVHSNTNNLHIHIAINKVNPHTLKVINPYNDVRILQETA
                     MKLEKKYNLKLDNHISQKDKQSNKYNIHTMNCNFETWVKEKLSKQVDLMLKDEKTTFK
                     DIKQFLAEYDLEFRERRKGFVIASKSEKLFCKASSIHRGLSKQALEKRFKELDLKQEK
                     ENTQNIKEEKHEIKEQYQRPNKETSKTLWEKYLRIENEKKAELDKELRILKLRRNEFK
                     TSIPSMKFNKNTFAHVKNQRMIFKNKQKELYQKYKRVSYRDFLISESLSGNEEATRAL
                     RRTKTKINENENTLSSTQEKPKIFENVDYITKEGYAVYKSGFNKAIDKGEMLKVSLIN
                     DKDDKEFLLNSLLMAIDRFGNHLNITGDDKFKRNILEVANDYNLNVSFSDQRMQKIQE
                     ENNNKRQEMKTRKVLKNIIELKIKLTEQDKDIDENIKEKELKALKFSLKKISNSTPSI
                     FKGELKKLGFSYKEIDSMDTESVCIEIDGFIVNSANKEGLIAMNEEIKQTLIDDEEIK
                     RFEKFEHLFLNTNKITDIAKGFYTNRKIDADEYIKRFSMQESKINKVANAISMLSDKN
                     IDIMEKYAKKLEKDLKYQYLKKVEVIENNDINLNNF"
     gene            2915..>3321
                     /locus_tag="R8X70_001832"
     CDS             2915..>3321
                     /locus_tag="R8X70_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS607-like element ISChh1 family transposase"
                     /protein_id="HEF2929580.1"
                     /translation="MNKLLSIGQASKALGVTIQTLRNWDKKGLLKPDDMTKGGERRYK
                     LETLKAINKNLVFNKDSLKTIAYARVSSHDQKDDLIRQVQVLELYCSKQGFNYEVIQD
                     LGSGMNYYKKGLTKLLNQILDGKVKRLVLTHKD"
BASE COUNT         1466 a          363 c          496 g          996 t
ORIGIN      
        1 aagaattcta tttttgcaaa acctcttttc attgcaaatc ctttaaaaat agtatattat
       61 aagatatttt agtatatttt agcaaattat agtgtatttt agtaaaatga ttaaaatgtt
      121 tgtaaaaata gcttaaattt tattataatt gcttggagta ataagacagg atatgtattt
      181 gctatacaaa tacaaagttt tatcgctaaa gctctaaaat aggacgccaa aatgaaaaaa
      241 acaaaacagg taaatattag actgacttta gaagaatata accttttaac agaaaaagca
      301 caaagtcacg gcttaacact ttcaagatat ttgcgtgatt tatcgatgaa ttatcctatt
      361 acttgcatag tagatcaaaa agtcgcacac gatgttttaa atattgctgg ggatatagga
      421 agattgggcg gactttttaa acattggttg gttagaaacg aagataataa agtcaatttt
      481 tcaaacaaaa gaacttataa tgatattgat gagattgtag atcaaatttt agatttacaa
      541 atacttttaa aagaacaagc caaaaggata atacaaaatg ataatcaaaa agattccaag
      601 caaaaagcag aataaatcaa gttttaaaaa tttatcaaac tatattttag acaaagacaa
      661 taataatgca aaagtattgg ttgattatat gcttgataaa aacaatgaaa tggataaagt
      721 ggaaggttat cattttacaa attgttcttt tgataacgat gaagataata ttaatgagat
      781 tatcaatact caaaagctta ataccacaac aaaacaagat aaaaccttgc atttagtagt
      841 ttcttttcaa gaagatgaaa accctacttt agaaatttta caagcaattg aagaagaaat
      901 cgcaaagtct ttaggaatgg aagatcatca aagattaagc gtggttcatt ccaacacaaa
      961 taatcttcac atacatattg caattaataa agttaatccg catacactaa aagttattaa
     1021 tccttacaat gatgttagaa ttttacaaga aacagcgatg aaacttgaaa agaaatataa
     1081 tttgaagtta gacaatcata tttcacaaaa agataagcaa agtaataaat ataatatcca
     1141 cactatgaat tgtaattttg aaacctgggt aaaagaaaag ctttctaaac aagtagatct
     1201 tatgttaaaa gatgaaaaaa ctacttttaa agatattaaa caatttttag ctgaatatga
     1261 tcttgaattt agagaaagaa gaaaaggttt tgttattgct tctaaaagtg aaaaattatt
     1321 ttgtaaggca agtagtattc acagggggtt gtctaaacaa gctttagaga aaagatttaa
     1381 agaattagat ttaaaacaag aaaaagaaaa tacgcaaaat attaaagaag aaaaacacga
     1441 aataaaagaa caatatcagc gaccaaataa agaaacttct aaaacattat gggaaaagta
     1501 tttaagaatt gaaaatgaga aaaaagcaga gcttgacaaa gaacttagaa tattaaagct
     1561 taggcgaaat gaatttaaaa cttcaatacc atcaatgaaa tttaataaaa atacctttgc
     1621 acatgttaaa aaccaaagaa tgatttttaa aaataaacaa aaagagcttt atcaaaaata
     1681 taaaagagtg tcttatagag attttttaat tagtgaatcc ttatcaggaa acgaagaggc
     1741 tacaagggct ttgcgaagaa ctaaaacgaa aatcaatgaa aatgaaaata ctctatcatc
     1801 aacccaggaa aaacctaaaa tatttgaaaa tgtagattat ataacaaaag aaggttatgc
     1861 tgtatataaa agtggtttta ataaagccat agacaaagga gaaatgctaa aagtatctct
     1921 tatcaatgat aaagatgata aagaatttct tttaaattct ttgcttatgg caattgatag
     1981 attcggaaat catcttaata ttacaggaga tgataaattt aaaagaaata ttttagaagt
     2041 cgcaaatgat tataatttaa atgtaagttt ttcagatcag agaatgcaaa agatacaaga
     2101 agaaaacaat aacaagcgtc aagaaatgaa aactagaaag gttttaaaaa atattattga
     2161 attaaaaatc aaactcacag aacaggataa agatatagat gaaaatatta aagaaaaaga
     2221 attgaaagct ttaaaatttt cacttaaaaa aatatcaaac tctacacctt caatatttaa
     2281 aggcgagctg aaaaaattag gctttagcta taaagaaata gattccatgg atactgaaag
     2341 tgtttgtatt gaaattgacg gctttattgt aaattctgcc aataaagaag gacttatcgc
     2401 aatgaatgaa gaaattaaac aaaccttgat cgatgatgaa gagataaaaa ggtttgaaaa
     2461 atttgaacat ttatttttaa atactaataa aataacagat attgccaagg gattttatac
     2521 aaatagaaaa attgatgctg atgagtatat aaaaagattt tcaatgcaag aaagcaaaat
     2581 taataaggtg gcaaacgcta tttctatgtt aagcgataag aatattgaca taatggaaaa
     2641 gtatgcaaaa aaacttgaaa aagatttaaa atatcaatac ttgaaaaagg tggaagtaat
     2701 tgaaaataat gatattaatt tgaataattt ttaatatcac aatattatta ttgtgatatt
     2761 attataatat taatttaata tatattttga gtatgcaaaa aaagcaaagc attctgcgat
     2821 aataaatata gaattgtaag ttatgataaa tctaaaatca aaatatttca agctcgtttt
     2881 aattattttc taaaattttg ttataatgcc acttatgaat aaattattat caatcggtca
     2941 agctagtaaa gctcttggtg ttactatcca aactcttaga aattgggata aaaaaggctt
     3001 gttaaagcct gatgatatga ccaaaggtgg agagcgtagg tataaactag aaacattaaa
     3061 agctataaat aaaaacctag tttttaataa agatagctta aaaactattg cttatgctcg
     3121 tgtttctagc cacgaccaaa aagatgattt aataagacaa gttcaagtct tagagctata
     3181 ttgttctaaa caaggcttta attatgaagt tatacaagat ttaggctctg gtatgaatta
     3241 ttataaaaaa ggcttaacta aattgctaaa tcaaattcta gatggtaaag taaaaagact
     3301 agttttaact cacaaagaca g
//
LOCUS       DAQUWA010000117         3163 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.117, whole genome shotgun sequence.
ACCESSION   DAQUWA010000117 DAQUWA010000000
VERSION     DAQUWA010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3163
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.117"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..401
                     /locus_tag="R8X70_001833"
     CDS             <1..401
                     /locus_tag="R8X70_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEF2929581.1"
                     /translation="ETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKSDIEWAKWIEW
                     LRISGMPIEQVKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTLKESEKVLSKKIK
                     IYEEMLANEVDGFNPESKDYQPCDKFCKES"
     gene            complement(410..1437)
                     /gene="acr3"
                     /locus_tag="R8X70_001834"
                     /pseudo
     CDS             complement(410..1437)
                     /gene="acr3"
                     /locus_tag="R8X70_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858915.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter Acr3"
     gene            complement(1508..1852)
                     /locus_tag="R8X70_001835"
     CDS             complement(1508..1852)
                     /locus_tag="R8X70_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HEF2929582.1"
                     /translation="MKLAFICIHNSCRSQMAEALVRHKAEKMGVDIEVFSAGSDTSKS
                     VNSQAIRLMREIYQIDMKKHYSKLIDSLPQNLDIVVSMGCGVACPSLKSRYYFDFGLK
                     DPSGSCDDEFKK"
     gene            complement(1849..2166)
                     /locus_tag="R8X70_001836"
     CDS             complement(1849..2166)
                     /locus_tag="R8X70_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEF2929583.1"
                     /translation="MQKFLTIISAINDESRVLILYHLLKYQELCVCDLQKLLNMGQSR
                     LSRHLKILKDAGFLYVKRKGTWAYYGINNELLKLHSDLFENIKNLDIDNIVLEQNTCE
                     NDK"
     gene            complement(2176..3124)
                     /locus_tag="R8X70_001837"
                     /pseudo
     CDS             complement(2176..3124)
                     /locus_tag="R8X70_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_129557825.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
BASE COUNT         1206 a          475 c          494 g          988 t
ORIGIN      
        1 aagaaacaaa aattagtgct catactttaa gattttgggc taaaaaaggt ttgtttcctt
       61 ttgttcaaaa agatgaaaat agtgtgaaat atttttcaaa aagcgatata gaatgggcaa
      121 aatggataga atggcttaga atttcaggta tgccaataga acaagtcaaa cattatataa
      181 aactttgctc tttgggtata aaaactgcta aagaaagaca agagatgtta aagcaaacaa
      241 agaaaaaatt acaaaaccag attaaaacat taaaagaaag tgaaaaagtt ttaagcaaaa
      301 agataaaaat ttatgaagaa atgcttgcaa atgaagtcga tgggtttaat ccagaaagca
      361 aggactatca accttgcgat aagttttgta aagaatcatg aagcttgatt cattttttag
      421 aatttaaact tttgcctaat gcccatttta caagtaagat aagtacagaa acttctacta
      481 aggggcctat aatgcttgca aaagcttgtt ctgagtgaag cccaaaagta gcaatacaaa
      541 tgattatagc taattcaaag ttatttccac tagcactaaa gcataaagaa caagttttag
      601 gataagaaag atgatttttc ttagaaataa accaagttag aaaaaacatg aagataaaat
      661 acaaagtcaa aacaaaggct atttttaaag cttctaaagg caggtgaaat acttcatttg
      721 ctttgtaaga acacataatg ataatagttg ctagcagggt gataagagtt atagggctga
      781 ttttaggtaa aaaggtattt tcgtaccatc gtttgctttt gtattttaaa agtagggttc
      841 ttgttataaa gcccattaaa aaaggaattc taaataaatc aaaacatttt tacttagagc
      901 tgaaaaatct atatctaaac ttgtagctaa agtgctttga cctggtaatt ttggtaaaaa
      961 atctagataa atataagcca aagtggaaaa aaaataaaat ttgaaaaatg ctattcatcg
     1021 ctactaaagc actggtgtat tctctatcgc cttttgctaa atcgctccat atcaccacca
     1081 ttgcgatgca tcttgccaag ccgatgatga taactccttg catatataaa ggctcgtctt
     1141 ttaagaaaat aaaagctaag ataaacataa gcaaagggcc tatgaaccaa tttaaaatca
     1201 tagaaagcaa gataactttt ttagaatcaa atacctttga aagctttgca taatcaacct
     1261 tagccaaagg cggatacatc atcaaaataa gacataaagt caatactaca tttacagact
     1321 tgtactcaaa taaattccac aataaagcga tattggggaa aatgatacct aaaaccaagc
     1381 ctaaaaaata gctaaaaata tccaaagcgt gagaaatcta tcgataaaac ctaacatgta
     1441 aagtccttaa gagaatttgt ctttatggct tgtaaaagag ctgttatttt ataatctaaa
     1501 atttgaatta ttttttaaac tcatcatcac agcttccgct aggatctttt aatccaaaat
     1561 caaaataata ccttgatttt aagctaggac aagccacgcc acaacccata cttacgacta
     1621 tgtctaaatt ttgaggcaaa gaatcaatga gtttagaata atgctttttc atatcgattt
     1681 gataaatttc acgcataagt cttatagcct gcgaatttac actcttagaa gtgtcgcttc
     1741 ctgcggaaaa tacttcgata tctacgccca ttttttcagc tttatgccta actagtgctt
     1801 ctgccatttg agaacggcag ctattgtgaa tacaaataaa tgcaagtttc atttatcgtt
     1861 ctcgcaagtg ttttgttcta aaactatgtt gtcaatatct agatttttaa tattttcaaa
     1921 aagatcagaa tgcagtttta aaagctcatt gttgatacca taatacgccc aagttccctt
     1981 acgcttgaca tataaaaatc ctgcatcttt taaaattttt aaatgtcttg aaagtcttga
     2041 ttgccccatg tttaaaagtt tttgcaaatc acacacgcaa agttcttgat attttaaaag
     2101 atggtatagg ataagcactc tgctttcatc gttgatcgct gaaatgatgg ttaaaaactt
     2161 ttgcatttat tttccttata tgaaatttat aagcatacca aaagatatgg ctacgcttaa
     2221 aatgatagct ataaacaata ataaaaattt catcttaaat atttgcttaa gtaaaacaag
     2281 ttcgggtaaa gaacaccccg cacctgcgat taaaaaactc ataatcacac cttgagaaat
     2341 tcccatttgt aaaagtatca agcctatagg gatgatggtt tctactctta agtaaagcaa
     2401 aactccaaaa aacgctgcta ggataatgct taaaatttca ttgccactta ggtatttttg
     2461 taaaatttct tgagggatga aatcatggat caaagctcct ataagcactg cgattactat
     2521 atagggtagc aattttttat agtttgcaat actctcttta aaaagttttt tgaaatttat
     2581 ctttgtatcg ttagttttgt tttgagtgtt agcacaacaa gagcttggtt taaagactat
     2641 tttacctatg tttttagcat tttgtgtgaa aatgcttggg ggctgagttt ttaggagtat
     2701 gttttaaaaa gtactcttct ttaaattttg aaaaaataag agaaattata aaaataaaaa
     2761 ttactaaaaa caatacatac ataagactta atttcaagcc aaaggtaaca aaaagcatgg
     2821 taaaaatgat aggatttata agaggtgagg taaaaagata agccaagcac acgctaagtt
     2881 ttaccctagc ttccaaaaat gcttttaaaa gcggtatggt agagcaggag caaaaaggcg
     2941 ttaaagcacc taaaaatata gctttaaaat agcttgaaat tttatctccg ctcagttgtt
     3001 ttctaaacat tccttcatat ttttggttga taatgctaat aagaaaagaa attcctataa
     3061 aaagcacaga aagctcgaca aatagatata aaaactcttt aaaagtgcta aaaaatactt
     3121 gcattgtttt tcctaaaaaa tttttagagc agtgtaatat aaa
//
LOCUS       DAQUWA010000118         2957 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.118, whole genome shotgun sequence.
ACCESSION   DAQUWA010000118 DAQUWA010000000
VERSION     DAQUWA010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.118"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..795
                     /locus_tag="R8X70_001838"
     CDS             <1..795
                     /locus_tag="R8X70_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929584.1"
                     /translation="IEHLELGYKKQNSTCSIQEIRLPVFAPIKRYTPSSAIYKDFLKN
                     KRTRTINTQWGNVTIRGSLLTQIHKDILDLIILNNTKIQILKDQRISVDFCISNVLKS
                     YGDAGFNYKWFKNILEDIMGAVIKIKLENQTEFYFHIISAMGYNEKGDFGGIILSKEY
                     LDFYQKTIAINYNKEIQSIVLIENSLVKSIIRFFLSHNQINITLENLLIALGLEINTK
                     DRYFRKIKQEIKVSKNIFSNFKIEFNENKNTFEYKGNNSVNFLFTN"
     gene            770..2266
                     /locus_tag="R8X70_001839"
     CDS             770..2266
                     /locus_tag="R8X70_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEF2929585.1"
                     /translation="MSISCSQTKNSLTEEQQAVVDFNIDDILIVNAYAGTGKTSTLVQ
                     FCEARKDFKILYLSYNSSMRKEAETKFKHLKNVEVKTMHSLAYVELEVQKKYKDRLGS
                     LRAIDLFDFIGDLKEDVRSFYATAILKAVRYFCNSNLEPKEFLKEIAKEPSKYEISPK
                     MDLSYISKKTEKLWNDLQSQDCALVYEHDFYLKSYQLSKPKLEYDFILVDEAQDINAC
                     VIDIVLNQKQAKKVFIGDTFQSIYKFRGAVNSLEVLASMPKSHILYLTQSFRCPQSIA
                     TIANSYLGILNAPRDFKGTLKSRKGNNENEAKAIICRTNAKLFDIAVENLNKKLFFVG
                     GVNSYSFDELLDIQNLLFKKHKYIKNQFIAKFADLKELLEYINETKEVDLKQKIFVLF
                     KYVHSDIIKLIKDIEKSCVKKQEQADLILSTGHKSKGLEWNNVEIIDDFLNIKQELEE
                     REQITIAKEELNLLYVAVTRAKNSLNINKDYLLEKDFIEKNLERITIE"
     gene            2263..2475
                     /locus_tag="R8X70_001840"
     CDS             2263..2475
                     /locus_tag="R8X70_001840"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEF2929586.1"
                     /translation="MKIIKKLQEDGSFKEQTYYSVDEVAKMHSVTHTTVRIWISRGVL
                     KSLKLGKGYYISKETILNFQKTDSLS"
     gene            2495..2728
                     /locus_tag="R8X70_001841"
     CDS             2495..2728
                     /locus_tag="R8X70_001841"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEF2929587.1"
                     /translation="MGSTVKDKHVEMRDFLFNKYKKMTFSRKECAEILGVSLQTLDRL
                     TKNKKIESMNITRFVIFSIEEIAKILSGSKQMK"
     gene            2756..>2957
                     /locus_tag="R8X70_001842"
     CDS             2756..>2957
                     /locus_tag="R8X70_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041723282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEF2929588.1"
                     /translation="MKSIILSLHSVFLLQYHLILVVKYRREVIDDKICARLKEIFEYI
                     AKNDNYSLELIEFNHDKDHLHIL"
BASE COUNT         1227 a          358 c          441 g          931 t
ORIGIN      
        1 atagaacatt tagaactcgg atacaaaaaa caaaatagca cttgtagtat tcaagaaata
       61 agactacctg tgtttgcacc tattaaaagg tatactccat catcagctat ttataaagat
      121 tttctaaaaa ataaaagaac tcgcactatt aatacacagt gggggaatgt cactataaga
      181 ggctctttac tcacacaaat tcataaggat atactcgatc ttattatttt aaataataca
      241 aaaattcaaa tattaaaaga tcaaagaatt agcgttgatt tttgtattag caatgtgctt
      301 aaaagctatg gcgatgcagg ctttaattat aaatggttta aaaatatttt agaagatata
      361 atgggagccg taattaaaat taaattagaa aaccaaaccg aattttattt tcatattatt
      421 tccgccatgg gatataatga aaagggtgat tttgggggta ttattttaag caaagaatat
      481 ttagacttct accaaaaaac tatcgctata aattacaata aagaaataca atctattgtt
      541 ttaattgaaa attctttagt aaaatccatt atccgttttt ttctaagtca caatcaaatc
      601 aatataactc ttgaaaatct tttaattgct ttagggctag aaatcaatac aaaagatcgt
      661 tattttagaa aaataaaaca agaaattaag gtaagtaaaa atattttttc taattttaaa
      721 attgaattta atgaaaacaa aaataccttt gaatataaag gaaataatag tgtcaatttc
      781 ttgttcacaa actaaaaatt ctctcactga agagcaacaa gctgtggttg attttaatat
      841 tgatgatata ttaatagtga atgcttacgc aggcacagga aaaacctcta ctctagtgca
      901 attttgtgaa gcaagaaaag attttaaaat tttatatcta tcttataact cttccatgcg
      961 aaaagaagct gagactaaat tcaaacactt aaaaaatgta gaagttaaaa ccatgcactc
     1021 tcttgcatat gtagagttag aagttcaaaa aaaatataaa gatagattgg gaagcttaag
     1081 agctatagat ttatttgatt ttataggaga tttaaaagaa gatgttagaa gtttttatgc
     1141 aactgctatt ttaaaagctg ttcgatattt ttgcaacagc aatcttgagc caaaagaatt
     1201 tttaaaagaa atagcaaaag agccttctaa atatgaaatt agtccaaaaa tggatttatc
     1261 ttatatttca aaaaaaacag aaaaattgtg gaatgattta caaagtcaag attgcgctct
     1321 tgtctatgaa cacgattttt atttgaaatc ctatcaactt tcaaagccaa aattagaata
     1381 tgattttata ttagtagatg aagcacaaga tattaatgct tgtgttattg atattgtgct
     1441 taaccaaaag caagctaaaa aagtttttat aggagataca ttccaaagca tttataaatt
     1501 cagaggtgct gtaaattcct tagaagtatt agcatctatg ccaaaatctc atattttgta
     1561 tctaactcaa agctttagat gcccacaaag catagctact attgccaatt cttatttggg
     1621 aattttaaat gccccaagag attttaaagg aacgctaaaa tcaagaaagg gaaataatga
     1681 aaatgaagca aaagctataa tatgcagaac taatgctaaa ctatttgata tagcagtaga
     1741 aaatttgaat aaaaaattat tttttgtagg aggggtgaat agttatagtt ttgatgagtt
     1801 attagacata caaaaccttc tttttaaaaa acacaaatat atcaaaaatc agtttattgc
     1861 aaaatttgcc gacttaaaag aacttcttga atatatcaac gaaactaaag aggttgactt
     1921 aaaacaaaaa atatttgttc tttttaaata tgtgcatagc gatattataa agcttatcaa
     1981 agatattgaa aaaagctgtg ttaaaaaaca agaacaagct gatttgatat taagcacagg
     2041 acacaaaagc aaaggtttag agtggaataa tgttgaaatt attgatgatt ttttaaacat
     2101 caagcaagaa cttgaagaaa gagaacaaat taccatagca aaagaagaat taaatctttt
     2161 gtatgtggca gttacaagag ctaaaaattc tttaaacatt aacaaagatt atttgcttga
     2221 aaaagatttt atagaaaaaa atttagaaag gataacaata gaatgaaaat aattaaaaaa
     2281 ctacaagaag atggaagctt taaagagcag acttattatt ctgtcgatga agttgcaaaa
     2341 atgcactctg taactcatac aacagttcgt atatggatct caagaggtgt tctaaaaagc
     2401 ctcaaattag gaaaaggcta ttacatatca aaagaaacta ttcttaattt tcaaaaaaca
     2461 gatagtttat cataaaaaaa tttaaggaga aaaaatgggc agtacggtaa aagataagca
     2521 tgttgaaatg agagattttt tgtttaataa atataaaaaa atgaccttca gtagaaaaga
     2581 atgtgctgaa attcttggtg tatctttaca gactttagat agattaacaa aaaataaaaa
     2641 aatagaatca atgaatataa ctcgttttgt aatattttct attgaagaaa tagctaaaat
     2701 tctctctgga agcaagcaaa tgaagtgaat tagtaaaaac tagagcaaat ttcatataaa
     2761 aagcataata ctatctttac attcggtatt tttgttgcaa tatcacttaa ttttagtagt
     2821 aaaatatcgc cgtgaagtaa tcgatgataa aatttgtgct aggttaaaag agatttttga
     2881 gtatattgct aaaaatgaca attactcact agaactaata gaatttaacc acgacaaaga
     2941 ccatttgcat atacttt
//
LOCUS       DAQUWA010000119         2952 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.119, whole genome shotgun sequence.
ACCESSION   DAQUWA010000119 DAQUWA010000000
VERSION     DAQUWA010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2952
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.119"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..386)
                     /locus_tag="R8X70_001843"
     CDS             complement(<1..386)
                     /locus_tag="R8X70_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEF2929589.1"
                     /translation="MLGIDLGSNTLRAVFINEKFEKLDEYEFIIGSAKNLDKTGKISD
                     EAIEKLRNALQEIAKKYDLSQARAVATAAFRKASNTNEIFTRLKQEFQIDFKVIDAKI
                     EAKISVLGMKRGLLNLGLNLDCGYCD"
     gene            442..1209
                     /locus_tag="R8X70_001844"
     CDS             442..1209
                     /locus_tag="R8X70_001844"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEF2929590.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIAAKFGDQITLHVRE
                     DRRHAQDFDLENIIRFCKSPINLECALNDEILNLALKLKPYRITLVPEKREELTTEGG
                     LNLNHNKIKKSIEKLQNAQIEVSLFINPSLEDIQKSYELKADFIELHTGHYANLHNAL
                     FSNISHTAFALKEFDLSKKTLQSKFEEELNNIEICAKKGVELGLKVAAGHGLNYKNVS
                     QIANIKEICELNIGQSIVARSVFVGLQNAILEMKALL"
     gene            1212..2312
                     /gene="pdxA"
                     /locus_tag="R8X70_001845"
     CDS             1212..2312
                     /gene="pdxA"
                     /locus_tag="R8X70_001845"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HEF2929591.1"
                     /translation="MKKLAISIGDINGIGLEILARSHEKLSQICTPYYFIHESLLQKA
                     LKLLNLKLLNAKIVAFKDAKNYEFTLLKKHNSLEIYSFGLPLNLKVDENFDIKAGEID
                     AKSGLYSFLSFKAASYFVYKNHAHALLTLPIHKKAWEDAGLKFKGHTDALRFFFKKNA
                     IMMLGCKELFVGLFSEHIPLAKVSKKITFQNLSIFLKDFYQETRFKKIGLLGFNPHAG
                     DYGVIGGKEEELMQKAIAFVNAFLNSKKDEKFFKKALKDEKLQKELLLNFNTKGVYLP
                     YPLVADTAFTKSNLKACNRLIAMYHDLGLAPLKALYFEKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNAKISTKSYFEAAKFALELPSKASI"
     gene            complement(2296..2901)
                     /locus_tag="R8X70_001846"
     CDS             complement(2296..2901)
                     /locus_tag="R8X70_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929592.1"
                     /translation="MKIILLTILSFLSLWGLSFDELIYKNEVRASFDCSKVKNNGKND
                     DELIICNKIGAINEFENKKLALMDNIFISLYQELLKNANENIKEDFKLVVKKMFRERK
                     NCAKVISNDLLQADQDPQSPFVYKTDCIEKTYAKVFLELMQKAKKDTQSKERLKQIFN
                     NQVNRYENLIQMSIQDPIDLEIFIDNLAQEGLIDDNARLKL"
BASE COUNT         1044 a          475 c          418 g         1015 t
ORIGIN      
        1 aaatcacaat acccacaatc caaatttaag cctaaattta aaagccccct tttcataccc
       61 aaaacgctga ttttagcttc aattttggca tctatcactt taaaatcaat ttgaaattcc
      121 tgttttaaac gagtaaaaat ttcattcgta ttgcttgctt ttctaaaagc tgcagttgcg
      181 actgctcttg cttggcttaa gtcatatttt ttagctattt cttgaagtgc attgcgaagt
      241 ttttctatgg cttcatcact tatctttcca gttttatcta agtttttagc cgaacctatg
      301 ataaattcat attcatccaa tttttcaaat ttttcattta taaaaaccgc tcttaaagta
      361 tttgagccaa gatctatacc taacatcact atccttattt aaatttatag tataatagca
      421 aaaaagttct aaaggaaaaa tatgctttta ggtgtaaata tcgaccacat tgcagtatta
      481 agacaagcta gaatggtaaa tgatcctgat cttttagaag ccgcttttat agctgctaaa
      541 tttggagatc aaatcacttt gcatgtaaga gaagatcgcc gtcatgctca agattttgat
      601 ttagaaaata tcatacgctt ttgcaaaagt cctatcaatt tagaatgtgc tttaaatgat
      661 gaaattctaa acttagcact taaattaaaa ccttatcgta tcaccctagt gcctgaaaaa
      721 agagaagagc ttaccacaga aggggggcta aatttaaatc ataataaaat caaaaaaagt
      781 atagaaaaac ttcaaaatgc gcaaatcgag gtttcacttt ttatcaatcc tagcttagaa
      841 gatatacaaa aatcatatga attaaaagct gattttatag aacttcacac aggacattat
      901 gcaaatttgc ataacgcact ttttagcaat atctctcata cagcctttgc tttaaaagaa
      961 tttgatttaa gtaaaaaaac attacaaagt aaatttgaag aggagttaaa caatatagaa
     1021 atttgtgcta aaaaaggagt ggagcttgga ttaaaagtcg ctgctgggca tgggctaaat
     1081 tataaaaatg taagtcaaat agcaaatatc aaagaaattt gcgaacttaa tatcggccaa
     1141 agtattgtag caagatcggt ttttgtagga ctacaaaatg cgattttaga aatgaaagca
     1201 ctgctttaaa gatgaaaaaa ttagccatta gcataggcga tatcaatggc atagggcttg
     1261 aaattctagc acgctcacat gaaaaattaa gccaaatttg cactccttat tattttatcc
     1321 atgaaagctt gcttcaaaaa gctttaaaac ttttaaattt aaagctttta aatgcaaaaa
     1381 tcgtagcttt taaagatgct aaaaattatg aatttacact gcttaaaaag cataattctc
     1441 ttgaaattta ttcttttggc ttgcctttaa atttaaaagt ggatgaaaac tttgacatta
     1501 aagcaggaga aatagatgca aaaagtggcc tatatagctt cttaagcttt aaggcggcaa
     1561 gctattttgt ttataaaaac cacgcacacg ccctacttac tctacctata cataaaaaag
     1621 cttgggagga tgcggggctt aaatttaaag gacatactga tgcactaaga ttctttttta
     1681 aaaaaaatgc catcatgatg ctaggatgta aggaactttt tgtaggactt tttagcgagc
     1741 acataccctt agcaaaagta agcaaaaaaa tcacttttca aaatttaagt atttttttaa
     1801 aagactttta tcaagaaact cgctttaaaa aaatcggact tttaggtttt aacccacatg
     1861 caggagatta tggggtgata ggaggcaaag aagaagagct tatgcaaaag gctatcgctt
     1921 ttgttaatgc ttttttaaat tctaaaaaag atgaaaaatt ctttaaaaaa gctctaaaag
     1981 atgaaaaatt acaaaaagaa ttgcttttaa attttaatac aaaaggtgtt tatttgccct
     2041 accctttagt cgcagataca gcttttacaa aatcaaattt aaaagcatgc aatcgcttaa
     2101 tagccatgta tcacgatctt ggcttagcac ccctaaaggc tttgtatttt gaaaaaagta
     2161 tcaatgtgag tttaaatttg cccattatac gcgtaagtgt tgatcatggc accgcctttg
     2221 ataaggccta taaaaatgcc aaaatcagta ctaaaagcta ttttgaagca gctaaatttg
     2281 ctttagaatt gccttctaaa gcttcaatct agcattatca tcgatcaagc cctcttgggc
     2341 tagattgtct ataaaaattt ccaaatctat aggatcttga atgctcattt ggattaaatt
     2401 ttcatatcta tttacttgat tattaaaaat ttgctttaat ctttctttgc tttgagtatc
     2461 ttttttagct ttttgcataa gctctaaaaa tactttagca taagtttttt ctatacaatc
     2521 agtcttgtaa acaaaaggcg attgaggatc ttgatctgct tgcaaaagat cgtttgatat
     2581 aactttggca caattttttc tttctctaaa catttttttc acaaccaatt taaaatcttc
     2641 ttttatattt tcatttgcat tttttaaaag ctcttgatat aaacttataa agatattatc
     2701 catcaaagca agttttttat tttcaaattc attaatagcg cctattttat tgcatatgat
     2761 taactcatca tcatttttgc cattattttt aaccttagaa caatcaaaac tcgctctaac
     2821 ttcattttta tatataagct catcaaaact caagccccat aagctaagaa aacttaaaat
     2881 tgttagtaaa attatcttca ttgcctctcc ttattttttg ttttattgta acaaaaatat
     2941 ttttaatttt tt
//
LOCUS       DAQUWA010000120         2766 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.120, whole genome shotgun sequence.
ACCESSION   DAQUWA010000120 DAQUWA010000000
VERSION     DAQUWA010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.120"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..818
                     /locus_tag="R8X70_001847"
     CDS             <1..818
                     /locus_tag="R8X70_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEF2929593.1"
                     /translation="GRKLAKSFKKILEFLNFINDSKPIILEKSIFKELNLLNKKLLKT
                     KEKILKNTQKNKKQSDKISLKNTQLASVISAISHELKNPLSVIDLSLEMLKDENLKDE
                     KLKNELLEKISRQSLKLNALTHKLNFVFNLNHEALQMQEFDLFTLCEKIVKNPGFERV
                     ILRGKSTRVKADEFLIEQVIINLLSNALKYSQKEVILIAQDQKISVLDFGKGIEKNQL
                     KFITKKFYKIDTKSNNSFGLGLFLVKKILSIHKSYLEISSTVSQGSKFSFKLH"
     gene            827..2758
                     /locus_tag="R8X70_001848"
     CDS             827..2758
                     /locus_tag="R8X70_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEF2929594.1"
                     /translation="MALIDLIDASKKFGEKIVLNEANFSANEGEKIAIIGKNGEGKSS
                     LLKALLGTLALDSGRVVRQNGKSIAMLSQTVDFNANLSVKEAIKIELEEIYNTLKEYE
                     ASQSKLEKEPTNKEYLKQMDDLIALIDSKDAWNIEAKITRVLKEFSLLDYSDRLVCTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEDLLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVDQGKLSVFKGGYTNYLEKKTQILESLAKSHETLLKHLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFTGEKIPNRKKMLFEL
                     KNVSKNLGEKALFADFSSRILQGERIAIVGKNGCGKSTFLKILLGELKQDSGEIKRGE
                     IKIGYFDQARSLVNSDKTLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSV
                     SILSGGEKNRVALALLFTEEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFVDKIATKLYAFENGAKINILHTLYTEYLENEKEMQEFDDYVSSLDLQEQTRMQKE
                     KSSKKLSYKENEILKNHPEKIEMLEKQISKLNSDLSNPSVYQEIGINTLYEELEQAQK
                     ELEKLESEYFEVLEKSENL"
BASE COUNT         1087 a          345 c          490 g          844 t
ORIGIN      
        1 tgggaagaaa actagcaaaa agttttaaaa aaattttaga atttttaaat tttatcaacg
       61 attcaaaacc cattatttta gaaaagagta tttttaaaga gctaaattta ctaaacaaaa
      121 aacttttaaa aacaaaggaa aaaatcttaa aaaatactca aaaaaacaaa aaacaaagtg
      181 ataagatttc tcttaaaaat actcaattag caagtgttat ttctgctatc tctcatgagc
      241 ttaaaaatcc tttaagtgtg attgatctta gcttagaaat gcttaaggat gagaatttaa
      301 aagatgaaaa actcaaaaac gaattactag aaaaaatttc acgccaaagc ctaaagttga
      361 atgctttaac acataagctt aattttgttt ttaatctcaa ccacgaagcc ttgcaaatgc
      421 aagaatttga tctttttact ttgtgtgaaa aaattgttaa aaacccaggt tttgaaagag
      481 tgattttacg cggaaaaagc actagagtaa aagcggatga gtttttaatc gagcaagtga
      541 ttattaactt actttctaat gctctaaaat acagccaaaa agaggttatt ttgattgcgc
      601 aagatcaaaa gattagtgtt ttggattttg gcaagggtat agaaaagaat caattaaaat
      661 ttattacgaa aaaattttat aaaattgata ctaagagcaa taattctttt ggacttgggc
      721 tttttttggt aaaaaaaatt ttaagcatac ataaaagcta tttagaaatt tctagcactg
      781 tatcgcaggg ttctaaattc agttttaaac ttcattaagg aaaaaaatgg cacttattga
      841 tttaattgac gcttcaaaaa aatttgggga aaaaattgtt ttaaatgagg caaattttag
      901 cgctaatgaa ggcgaaaaaa tagccatcat aggaaaaaat ggagaaggaa aatcaagtct
      961 tttaaaagca cttttaggca ctctagctct agatagcggc agagtggtaa ggcaaaatgg
     1021 aaaaagtata gccatgcttt cgcaaaccgt tgattttaac gcaaatttaa gcgttaaaga
     1081 agccataaaa atcgaacttg aagaaattta taatacttta aaagaatatg aagcatcgca
     1141 aagcaaactc gaaaaagagc ctacaaacaa agagtattta aaacagatgg atgatttaat
     1201 tgctttaatc gatagcaaag atgcttggaa tatcgaagct aaaatcacgc gtgttttaaa
     1261 agaattcagc ctattagatt actctgatcg tttggtttgc actttaagcg gtggtgaaat
     1321 tcgcagagta ggtctttgta tacttttact taaaaatcct gatattttat tgcttgatga
     1381 gcctacaaac caccttgatg tttatatgac aagcttttta gaggatttgt taaaaaattc
     1441 aaaaatgtgt gtgattttta tctcgcatga tagatatttc atcgatgcaa ttgcgcataa
     1501 atgtgtagaa gttgatcaag gtaaacttag tgtgtttaag ggtggttata cgaattacct
     1561 agagaaaaaa actcaaattt tagaaagttt agctaaaagc catgaaacac ttttaaagca
     1621 tttaaaaagc gaggaagaat ggcttagaag aggtgttaaa gcaagactta aaagaaatga
     1681 agggcgcaag gagcgtattt ttaaaatgcg tgaagaagct aaaaaaaatc ctggtgccat
     1741 caagcgttta aagcttgaaa tttcaagggc agctttaaat tttacaggag aaaaaattcc
     1801 taatcgcaaa aaaatgcttt ttgagcttaa aaatgtaagt aaaaatttag gagaaaaagc
     1861 tctttttgca gatttttcaa gtcgtatttt acaaggtgaa cgcattgcta tagtaggcaa
     1921 aaatggttgt ggaaagtcta cttttttaaa aatactttta ggagaattaa agcaagatag
     1981 tggagagatc aagcgtggag agattaaaat agggtatttt gatcaagcta gaagtcttgt
     2041 aaattcagat aaaaccttgc ttgaaatttt ctgtcctaat ggaggcgaca gggttgaagt
     2101 acgcggaaaa aatatgcatg tttatgggta tttaaaaaat ttcttatttc ctaaagaatt
     2161 tttagataaa agcgtttcca ttttaagtgg cggagaaaaa aatcgcgttg ctttggcttt
     2221 actttttaca gaagaatatg atgttttaat cctagatgag cctacaaatg atcttgatat
     2281 agcgactatt aatattttag aagagtattt gcttagcttt gaaggagcca ttttgctagt
     2341 atctcatgat agatattttg tagataaaat tgctaccaaa ctttatgctt ttgagaacgg
     2401 cgctaagatc aatattttgc atacgcttta tactgaatat cttgaaaatg aaaaagaaat
     2461 gcaagaattt gatgattatg tttcaagtct tgatttgcaa gagcaaactc gtatgcaaaa
     2521 agaaaaaagt agcaaaaaac taagctataa agaaaatgaa attttaaaaa atcatcccga
     2581 aaaaatcgaa atgcttgaaa aacaaatttc taaactcaat agcgatcttt caaacccaag
     2641 cgtatatcaa gaaataggca taaacactct ttatgaagag ctagaacaag cacaaaaaga
     2701 attagaaaaa ttagaaagcg aatattttga agttttggaa aaaagtgaaa atctataaat
     2761 ttttat
//
LOCUS       DAQUWA010000121         2674 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.121, whole genome shotgun sequence.
ACCESSION   DAQUWA010000121 DAQUWA010000000
VERSION     DAQUWA010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.121"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            333..1502
                     /locus_tag="R8X70_001849"
     CDS             333..1502
                     /locus_tag="R8X70_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase family protein"
                     /protein_id="HEF2929595.1"
                     /translation="MDRILENNLANAFNELQQTLSNSYLELYSCTTNKRLQLVFSSLH
                     NNIIECFKKMNERLPSTEKSNKHYLANYSRKLKTNIELALHLQKEFKNSELSFEIDKY
                     YYNIFKQCLDFLENSGGSEIPLGMKKITIYEKISIFVLSNKINIPNILRSCTLTLIGS
                     GSYANVYKYYDDFYQCHFALKRLNKAANDKEFIRFVKEYEIMRSVNNPYILKVYSMDE
                     QKKEYIMEYADFTLEKYIKNYNQKLSNGERISLGCQVLKGIEILWNNNILHRDISFNN
                     ILLKLYDYIYPVIKISDFGLAKEINSDLTSIDTEIKGSLNDFSTLKIKGFNEYNIEDE
                     LYALTQVLYFIATGKENVKKANCDFLKKGIGEDKENRYKKLEDLKVDFISFLKAR"
     gene            complement(1513..>2674)
                     /locus_tag="R8X70_001850"
     CDS             complement(1513..>2674)
                     /locus_tag="R8X70_001850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929596.1"
                     /translation="LLFIIISNFVENEGNINVVNLLDKLRIVRNLTQRIRALKQGKID
                     YTATLSYEKLYYILNLSLVNAKENIYTYLINNEVKLTNTDISKDSLDQEVYKAKYIQN
                     DNNLKCTIQQLEDYKYICGDLSFFLFEDKELLKFASDNITKIFTSKTHLIIRSLLTIE
                     DYAKYIGFAGSGSKYYFGVDNKWEILLTKNNQNDMEDYTDYLGLFYQFFKKYKSIKDE
                     FLDYDSNEILEQLILDYLNNKGNINYTSWVYYFIKHGDKIFNNTEKREKNYFVWYDEE
                     NFNIDKMYGETMGSKYVNTYVKILSEISNIHLIEDEQRSEYIKITDKIEITSCNKNGW
                     LLKLNDKFIVENINSDFVLEKEDEDGVYILKHNKSQDVIEMAQELINTVQDN"
BASE COUNT         1010 a          317 c          314 g         1033 t
ORIGIN      
        1 tttatttatt ttgttatgaa gctttaagaa taattaaacc ataaaataca tatgaatttt
       61 catagtgtta atactgataa aataatggtt tctcagcttt ttcggttttt tgcttataaa
      121 tacgctaatt aatcaataaa tgaatgctat aaagatttga ttacaattaa atgctgccaa
      181 agataaacaa aaacaagcct aaaatcaaaa tttactataa agcaatatca acaattaaaa
      241 tcgatttatg agcttgtttt gtgttataat ttattttgca tagattttat taatcaatag
      301 ttttattttt tataggtaaa agagtttcaa atatggatag aatattagaa aataatttag
      361 ctaatgcatt taacgaactt caacaaacat tatctaattc ttatttagaa ttgtattctt
      421 gcactacaaa caaacgcctt caattagttt tttcatcttt acataataac atcatagagt
      481 gttttaaaaa aatgaatgaa cgtcttccat ctactgaaaa aagcaataaa cattatttgg
      541 ccaactatag tagaaagtta aaaaccaata tagagttagc tttgcactta cagaaggaat
      601 ttaaaaacag tgagttatct tttgagatag ataaatatta ttacaatatt tttaaacagt
      661 gcttagattt tttagaaaat agtggaggta gcgagattcc tttaggaatg aaaaaaataa
      721 ctatttatga aaaaatatct atatttgttt tgtcaaacaa aataaatatt ccaaacatac
      781 tcagaagttg cactttaact cttattggta gtggatctta tgctaatgta tataaatatt
      841 acgatgattt ttatcaatgt cattttgcat taaagagact aaataaggct gccaacgata
      901 aagaatttat tagatttgtt aaagagtatg aaataatgag aagtgttaac aatccttata
      961 ttctaaaagt atattctatg gatgaacaaa agaaggaata tattatggaa tatgctgatt
     1021 tcactttaga aaaatatata aaaaattata accaaaagct ttcaaatggt gaaagaattt
     1081 ccttaggttg tcaagtgctt aaagggattg aaattctatg gaacaataat atattacata
     1141 gagacattag ttttaataat atcttactga agctatatga ttatatttac cctgtgataa
     1201 aaatttctga ttttggatta gcaaaagaaa ttaatagcga tttaacaagt attgatacag
     1261 aaataaaagg aagtttaaat gatttttcta ctttgaaaat taaaggtttt aatgagtata
     1321 acattgaaga tgagctttat gcgttaactc aagtcttgta ttttatagct acaggtaaag
     1381 agaatgtaaa aaaagcaaat tgtgactttt taaaaaaagg aattggtgaa gacaaggaaa
     1441 acagatataa aaagctagaa gacttaaaag tggattttat ttctttttta aaagcaagat
     1501 aactaggtta aactagttat cttggacagt attaattaat tcttgtgcca tttcaataac
     1561 atcttgtgat ttattgtgtt ttaaaatata aactccatct tcatcttctt tttctaaaac
     1621 aaaatcacta tttatatttt ctacaataaa tttatcattt aattttaaaa gccacccatt
     1681 tttattacat gatgttattt ctattttatc ggtaatttta atatattcag atctttgttc
     1741 atcttctatc aaatggatat tacttatttc agataatatt tttacataag tatttacata
     1801 tttgctaccc attgtttcac catacatctt atctatatta aaattttctt catcatacca
     1861 aacaaaataa tttttttccc ttttttctgt attgttaaat attttatctc catgtttaat
     1921 aaaataataa acccaactgg tatagtttat attaccttta ttgttaagat aatccaaaat
     1981 taactgttct aatatttcat ttgaatcata atctaaaaac tcatccttaa tagatttata
     2041 ttttttaaag aactgataaa ataagccaag gtagtctgtg taatcttcca tatcattttg
     2101 attattcttg gttaataaaa tttcccattt attatcaaca ccaaagtaat attttgaacc
     2161 agagccagca aaaccaatat attttgcata gtcttctatg gtcagtaaag atctaataat
     2221 taaatgggtt ttgctagtaa aaattttagt aatattatca cttgcaaatt tcaataattc
     2281 tttatcttca aataaaaaga aagataaatc tccacagatg tatttataat cttctaattg
     2341 ttgaatggtg cattttaaat tattgtcatt ttgtatatat tttgctttat atacttcttg
     2401 atccaatgaa tctttgctta tatctgtatt tgttaatttt acttcattat tgattaggta
     2461 ggtgtatata ttttcttttg cattaactaa agacaaattt aatatataat ataatttttc
     2521 ataagataaa gtagcagtat aatctatttt accttgcttt aaagctctaa ttctctgagt
     2581 taaatttctt acaattctaa gtttatctaa taaatttaca acattaatat tgccttcatt
     2641 ttctacaaaa ttactaataa tgatgaataa taat
//
LOCUS       DAQUWA010000122         2669 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.122, whole genome shotgun sequence.
ACCESSION   DAQUWA010000122 DAQUWA010000000
VERSION     DAQUWA010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.122"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(547..753)
                     /locus_tag="R8X70_001851"
     CDS             complement(547..753)
                     /locus_tag="R8X70_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002899137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEF2929597.1"
                     /translation="MTKEKFNQLLKQANLNKKQLADISGIPYPTINAWGSTTSYPPYI
                     AFLLENYIKAQKYDKIKDLIKDDL"
     gene            912..1280
                     /locus_tag="R8X70_001852"
     CDS             912..1280
                     /locus_tag="R8X70_001852"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929598.1"
                     /translation="MEKVDYCRMSCLDGKINAFKYLLDLFLSDLENENDVKTCNMFEN
                     DTSIEYVKDMLMMMLDKIKEIVIDQDNCHHNIDMYASVYHEIIKDELGKEFTPKELKE
                     LHKKQEERLLKELFEESKKK"
     gene            1687..1917
                     /locus_tag="R8X70_001853"
     CDS             1687..1917
                     /locus_tag="R8X70_001853"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929599.1"
                     /translation="MKTITIKAKEQEINKLLDILKELNISYELESNNYKKALNDYESG
                     KSWQETKQELHKALNDYESGKAKLTPLGSEWL"
     gene            1917..2204
                     /locus_tag="R8X70_001854"
     CDS             1917..2204
                     /locus_tag="R8X70_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002926587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEF2929600.1"
                     /translation="MQILESDLFTNELNIILSFIVRKESIKVKNTFKNDLYKALKKLD
                     FMPYKFRKSLAFDDENVRDFIFKGYVIPYKIDKEKDLIIILGIYKENLPNF"
BASE COUNT         1119 a          262 c          361 g          927 t
ORIGIN      
        1 aattgaagca aatatagata aaataaggct ttataagcat tttagcaaaa atagcattta
       61 taattgattg aaataactat tttataggta tttgaagcat ttataagtat caattataaa
      121 taactttgct ttttccctta taattgatga ttttttagta aaaatcttaa aaaacatagg
      181 cataaagaga aaagatttat aattgatagg atttaaggtt tgaaagtatg gtaaattagg
      241 tatttatatc aattataaag gctattttcc ttaaaaatgg ggtaaatccc tattttatag
      301 gcgttttaat caattataaa gggtaattta taattgatta taattgcttt atattaaaaa
      361 taagccttta aaatgtttca cgcaataatt tttatatcat cgtggtttaa ttatgaaaat
      421 atttatcaat ttatttttat attttaattt agtatttttt agaaaaagtg gttgaagggg
      481 gcgtcttcaa atttgagcat acctagcaat tagcactgct caattttgag cacacatcat
      541 caaaacttac aaatcatctt ttattaagtc tttaatctta tcgtattttt gagctttgat
      601 atagttttct aataaaaaag ctatataggg cggataagaa gttgtagaac cccaagcatt
      661 aatagtagga tatggaatac cgcttatatc ggctaattgt ttcttattta aattagcttg
      721 ttttaaaagc tgattaaatt tttctttagt cattttgtaa cctttataat tttatataaa
      781 ttatatagct acaatactaa atataaaata aaaatattaa aacgatattt attaaagata
      841 aaattaagta ttaatattat attattttac tttaaaaaat atcaaatcaa tataacaaaa
      901 ggagaaaaaa aatggaaaag gtagattatt gtagaatgag ttgcctagat ggcaaaataa
      961 acgcttttaa atatctttta gatttatttt taagtgattt ggaaaacgaa aacgatgtta
     1021 aaacttgtaa tatgtttgag aatgatacaa gtatagagta tgtaaaagat atgcttatga
     1081 tgatgcttga taagataaaa gaaattgtta tcgaccaaga taattgtcat cacaatatag
     1141 atatgtacgc aagtgtttat catgaaatta taaaagatga gttaggtaaa gaatttaccc
     1201 ctaaagagct taaagaactg cataagaaac aagaagagag attattaaaa gaattatttg
     1261 aagagagtaa aaagaaataa aataagggta gtaggttaaa cttgctaccc ttacaaataa
     1321 accacgcaat aaaatcctta taaattatat aaaaaagatg atgtaaataa aatttactcc
     1381 atataaaaca aactttgaaa tatacaaaaa ttaatttaat atttaatctt attttaagaa
     1441 agcctgaaat ggaaaaggta attattttta gggcttttat ataaaacacc acttaaaaag
     1501 atgagctaat taaaagttag gtcattagat ttaatctacc cacctaagtg ttagggaact
     1561 actaaactaa acttaggggt taatatagtt tgtcaaagta ttttaaatta aatagctttt
     1621 cttttaaagg cttataaaat aaaataagtt ataataacta aactttgaac cagtaaagga
     1681 aaagctatga aaaccataac aataaaagca aaagagcaag aaataaacaa gcttttagat
     1741 attttaaaag agctaaatat cagttatgaa ctagaaagca acaactataa aaaggcttta
     1801 aatgattatg aaagcggtaa aagttggcaa gaaacaaaac aagaactaca taaggcttta
     1861 aatgattatg aaagcggtaa ggctaaatta acgccattag gcagtgagtg gctgtaatgc
     1921 aaatcctaga aagcgattta tttacaaatg aattaaatat tattttatcc tttattgtga
     1981 gaaaggaaag tataaaagtt aaaaacactt ttaaaaatga tttatacaag gctttaaaaa
     2041 agcttgattt tatgccttat aagtttagaa agtctttagc ctttgatgat gagaatgtaa
     2101 gagattttat atttaaaggt tatgtaatac cttacaaaat agacaaagaa aaagatttaa
     2161 ttattatctt aggtatttat aaagaaaacc taccaaactt ttaaaaaatt actttttaag
     2221 cttttgaaaa aatgagttta agtttcaagc taaaaaagct taaaaaaatg agaaaactta
     2281 aataaaaaaa gcgtgaaaca ttctatttaa gctaaataaa cttaaatgac tttaaaaata
     2341 ccttaatata atttttaata actccataaa atagggtttt aatgatgata taaataaata
     2401 aagtttgaaa agtgtagttt tcagatttgg tttaagtttt caaaggatat ttttaaaatt
     2461 ctataacaaa taaaaaggta acttaataaa ggtaactatt ataaaaatac tataaaatgg
     2521 gtatttattt ttagttatat atttcaagtc ctttcatctg caccacaatt taaaattata
     2581 tctcccttaa attagcgcaa tcgtcttttt ctttacaaaa taaaaaattt cattttgttt
     2641 taaattttta tttcgatttt tagaaaatt
//
LOCUS       DAQUWA010000123         2660 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.123, whole genome shotgun sequence.
ACCESSION   DAQUWA010000123 DAQUWA010000000
VERSION     DAQUWA010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.123"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            4..1398
                     /locus_tag="R8X70_001855"
     CDS             4..1398
                     /locus_tag="R8X70_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEF2929601.1"
                     /translation="MIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRERIPERTVHAK
                     GSAAYGEIKITADLSAYTKAKIFQKGEVTPLFLRFSTVAGEAGAADAERDVRGFAIKF
                     YTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWDFWSLCPESLH
                     QVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTLQGIKNLSNKEAAE
                     LIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDADKLGFNPFDLTKIWPHSVVPL
                     MDIGEMILNQNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRYRIGT
                     NYHLLPVNRARSEVNTYNVAGAMNFDSYRNGAAYYEPNSYEESPKEDKSYLEPDLVLE
                     GNAQRYAPLDDDFYTQPRALFNIMNQNQKEQLFENIAASMEGVEEKIITRALGHFEKI
                     SPDYAQGIKKALGK"
     gene            1455..1922
                     /locus_tag="R8X70_001856"
     CDS             1455..1922
                     /locus_tag="R8X70_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HEF2929602.1"
                     /translation="MMTLSLEEEKRFAELCKMAFNFARNNEYENLKIMIEAGLNVNLK
                     THKGDTLLMLAAYNNSYECAKMLLEKGALVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     YGANIDENNGLGMTPYSFAIMFGRKDVAEFLLKSSKKSLSKRLSLGILKLFKK"
     gene            complement(1926..2594)
                     /locus_tag="R8X70_001857"
     CDS             complement(1926..2594)
                     /locus_tag="R8X70_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEF2929603.1"
                     /translation="MDEKQKEQFIKLTNFLGQVLGKQYEVVFHVLSKEGAYIAAIANS
                     HVSGRTLESPLSAFASELVQNKAYLKEDFLCDYKALIGKSKLVRGSTFFIKNSDELVG
                     ILCINHDTSMMRDLVCRIIDIEKLGDMSEFLNQDKENNTSVDSLGNIETLSHSIEEIL
                     AQSIDMNYLNSDYQLSMAQKEEITKTLYQKGIFNIKGSVPIVARLLKISEPSVYRYLK
                     NFKS"
BASE COUNT          963 a          435 c          432 g          830 t
ORIGIN      
        1 aacattatag ccgataatca aaactcttta agcgcaggtg caaaaggccc tttacttatg
       61 caagattatc ttttacttga aaaacttgct catcaaaata gagaaagaat tccagaaaga
      121 acagtgcatg caaaaggaag cgcagcttat ggcgaaataa aaattacagc agatttaagt
      181 gcttatacca aagctaaaat ttttcaaaaa ggtgaagtta ctccattgtt tttgcgtttt
      241 tcaacagtag ctggcgaagc aggtgcagcc gatgctgaac gcgatgttag aggttttgct
      301 attaaatttt ataccaaaga aggaaactgg gatttagtag gaaacaatac cccaacattc
      361 ttcatccgtg atgcttataa atttcctgat tttatccaca ctcaaaaaag agatccaaga
      421 acgcacttaa gaagtaataa tgccgcttgg gatttttgga gtttgtgtcc tgaaagctta
      481 caccaagtaa ctattcttat gagcgataga ggaattccgg caagttatcg ccatatgcat
      541 ggttttggaa gccatactta tagctttatc aatgacaaaa acgagagatt ttgggtgaaa
      601 ttccatttta aaaccctaca aggtattaaa aatcttagca ataaagaagc tgctgagctt
      661 atcgccaaag atagagaaag ccaccaaaga gatctttaca atgctataga aaataaagat
      721 ttcccaaaat ggaaagttca agttcaaatt cttgctgaaa aagatgctga caaactaggc
      781 tttaatcctt ttgatttaac taaaatttgg ccacatagcg tagtgccttt aatggatata
      841 ggcgaaatga tcttaaatca aaatccacaa aattatttta atgaagtaga acaagcagct
      901 tttagcccaa gcaatatagt acctggtata ggttttagtc ctgataaaat gctacaagct
      961 agaattttct catatcctga tgcacaaaga tatagaatag gaactaatta tcatctttta
     1021 cctgtaaatc gtgctagaag tgaagtaaat acttacaatg ttgcaggtgc tatgaatttt
     1081 gatagctata gaaatggtgc tgcgtattat gagccaaaca gctatgaaga aagcccaaaa
     1141 gaagacaaaa gctatcttga gcctgattta gttttagaag gtaatgcgca aagatatgct
     1201 cctttagatg atgattttta cactcaacca agagcgttat ttaacatcat gaatcaaaac
     1261 caaaaagaac aactttttga aaatatagca gcttctatgg aaggtgtaga agaaaaaatc
     1321 attacgagag ctttaggaca ttttgaaaaa atttcacctg attatgcaca aggtattaaa
     1381 aaagctttgg gaaaataatt tttacttgcc actttttagg tggcaaacta aagattataa
     1441 acaaaggaaa aacgatgatg acacttagct tagaagaaga aaaaagattt gccgagcttt
     1501 gcaaaatggc ttttaatttt gctagaaata acgaatatga aaatcttaaa atcatgatag
     1561 aagcaggact gaatgtgaat ttaaaaacac ataaaggcga taccttgctt atgcttgcag
     1621 cttataataa ttcttacgaa tgcgcaaaaa tgcttttaga aaagggtgcg cttgttgatg
     1681 aaaaaaatga tcgaggacaa acacctttag caggagtttg ctttaagggc tatttgccta
     1741 tgtgcgagct tttagtaaaa tatggagcaa atatagatga aaataatggc ttaggtatga
     1801 caccttatag ttttgctatc atgtttggcc gtaaagatgt agccgagttt ttactcaaaa
     1861 gctctaaaaa aagcctaagt aaacgccttt ctttaggaat tttaaaatta tttaaaaaat
     1921 aatttctatg atttaaaatt ttttaaatac ctatagacac taggctctga aatttttaag
     1981 agtctagcca ctataggcac agaacccttg atattaaaaa tacccttttg atataaagtt
     2041 tttgtaatct cttctttttg tgccatgcta agttgataat ccgaatttaa ataattcata
     2101 tcaatgcttt gagctaaaat ttcttctata gaatgactta gggtttctat atttcctaaa
     2161 ctatctacac tggtattatt ttctttgtct tgatttaaaa attcactcat atcgcctaat
     2221 ttttctatat ctataatcct acaaaccaag tctctcatca tgctcgtatc gtgattgata
     2281 cacaaaattc ctaccaattc atcagaattt tttataaaaa atgtcgaacc tctaacaagt
     2341 tttgattttc caatcaaagc cttataatca cacaaaaaat cttcttttaa ataagcctta
     2401 ttttgcacaa gttcacttgc aaaagcactc aagggagatt caagagttct accgctgaca
     2461 tgactatttg caatagctgc tatataagca ccctctttag aaagaacatg aaaaaccact
     2521 tcatactgct tacctaaaac ttgtcctaaa aaattcgtga gctttataaa ttgctctttt
     2581 tgtttttcat ccatgaaaat attcctaaaa taataaaatt tagaatccaa agcttaaatt
     2641 ttaactttaa ttttttaaaa
//
LOCUS       DAQUWA010000124         2630 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.124, whole genome shotgun sequence.
ACCESSION   DAQUWA010000124 DAQUWA010000000
VERSION     DAQUWA010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.124"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..749)
                     /locus_tag="R8X70_001858"
     CDS             complement(<1..749)
                     /locus_tag="R8X70_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929604.1"
                     /translation="MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPY
                     FYTSFFQANLFVALFLPMIFTLFCLGKHHVLILNKKNIASITTLIFIGILSIILPRNT
                     TFNSAGLEFHFITLNFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFAAYFQF
                     LFQEGTGIRYFEFASLVFCFYLLNYAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIAL
                     LHFNELKDTKESYTKLILKQIAKILKRFRAK"
     gene            complement(810..1019)
                     /locus_tag="R8X70_001859"
     CDS             complement(810..1019)
                     /locus_tag="R8X70_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEF2929605.1"
                     /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELL
                     ENSKKTHEELLHIEQTIQDEIAKFK"
     gene            1186..1608
                     /locus_tag="R8X70_001860"
     CDS             1186..1608
                     /locus_tag="R8X70_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929606.1"
                     /translation="MDFNSVLFSIGDKLPKDATSTVMLKEKFDRLNEDKQKEVVAQLP
                     MIKLKSPALVFWVGTFLFGAFGVGRFMIGDWVLGLIRLGITIVAMFCGILMITYSALG
                     IIYGLLWLVNWIWWIVDMFLVGKKLRKQNFEKIANIIQ"
     gene            1860..2213
                     /locus_tag="R8X70_001861"
     CDS             1860..2213
                     /locus_tag="R8X70_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002920535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929607.1"
                     /translation="MKCFNAKFMFVGILAVFLSACSSGIPKCSDQDVQNVLTEIILEH
                     NFGRFSEVDRKKLKFTYSGFMSDLTDKESKTQYCKAQVKANGSIDSRPYKWDAWIEYF
                     ARYTDDGMVYVEITR"
     gene            2263..2469
                     /locus_tag="R8X70_001862"
     CDS             2263..2469
                     /locus_tag="R8X70_001862"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929608.1"
                     /translation="MDYNVFLLNIQDKINQEDFFNLKLKFEQLQNKKEALSNLVFLRL
                     QDPIKPLIMSMICGFFKFRLVGNR"
BASE COUNT          963 a          265 c          435 g          967 t
ORIGIN      
        1 atttttgctc taaagcgttt taaaattttt gcaatttgtt ttaaaatgag tttggtatag
       61 ctttctttag tatcttttag ttcattaaaa tgaagcaagg caatgatata gttgtttttt
      121 ccttttgtaa agcgtgtaag gcttttttca ttgggtagct ttgttaaggt gtcaaaaaaa
      181 gctaacctat aagcgtaatt taaaagataa aaacaaaaaa ccaaacttgc aaattcaaaa
      241 tatcttattc ctgttccttc ttggaataaa aactgaaaat atgcagcaaa aaatgcgata
      301 agaagataat attctttagt tttaaaagtt ttgataaaaa tgagtattaa gccgactaaa
      361 aaaaataaaa atcctaattc actcacaggt ttaaaaaaat ttaatgtaat aaaatggaat
      421 tctaaaccag cgctattgaa agtagtattt ctaggtaaaa tgatgcttaa aatgcctata
      481 aaaataaggg ttgtaattga ggcgatattt tttttattta aaattaaaac atgatgtttt
      541 ccaaggcaaa atagagtaaa aatcataggt aaaaacaaag ccacaaataa attagcttga
      601 aaaaaacttg tataaaaata aggcaactta gctcctagta atactaaagt caaaaagaaa
      661 atttttgaat ttttaaagta aaaggatagc acaagagctg aaatttcaaa aataaaactc
      721 aatgatatta aaaaatctaa taaaaacatt tcaaatcctt gattttaata aaagtgataa
      781 ttgtatagaa aaaagcttaa aagcggattt tatttaaatt tagcaatttc atcttgtatg
      841 gtttgttcta tatgaagcaa ttcttcatga gtttttttgc tattttctaa aagttcatca
      901 aatttaaagc caagcataac aatacgatat aaattgggtt tgtattttct ccaattatat
      961 aaagtgctaa catcaatgtc tagttcatat gccatatcac gcttgctctt ttttgtcatt
     1021 ttttacctca aaaatttagc ctttaaaaaa ttttacatta aaatttcttt attaaaaaca
     1081 cttgaaatat tcaatctttt atataaaata tatttaatat ttcaatatta attaagttat
     1141 agtatggaat aattcgagat attttttaat tttcaaggag tagttatgga tttcaattcg
     1201 gttcttttca gcattggcga taaattgcca aaagatgcaa catctaccgt gatgctaaaa
     1261 gagaaatttg atcgcttaaa tgaggataaa caaaaagaag tagtagcaca gcttccaatg
     1321 ataaaactaa aaagtcccgc tttagtattt tgggtaggga cttttttatt tggtgctttt
     1381 ggagtgggtc gttttatgat aggagattgg gttttagggc ttatacgctt gggaattaca
     1441 attgtagcta tgttttgtgg tattttaatg attacatata gtgctttagg gataatatat
     1501 ggtttgttgt ggcttgttaa ttggatttgg tggattgtag atatgttttt agtgggtaaa
     1561 aaattaagaa aacaaaattt tgaaaagatt gcaaatatta tacaataatt tcgagttttt
     1621 atgaaaaaca atcaaaaata agtttgcaaa atatttttat taagttttta gtaaattttg
     1681 tttttgtggc aagtgagatt tagaattctt aagcaataaa gaaaattgct tttaaatatt
     1741 ttgtctgttg ctccaaatat tgcacaggtt tttttagaga ttacaagtaa aatggtgaac
     1801 ttggtacaga tgaatagaaa ctaaaatatt atttaggtga acaaaaaagg aggaaattaa
     1861 tgaaatgttt taatgcgaaa tttatgtttg ttggaatttt ggcagtattt ttgagtgctt
     1921 gtagtagcgg tattccaaaa tgtagtgatc aagatgtaca aaatgtttta actgagatta
     1981 ttttagaaca caattttggt agattttctg aggttgatcg taaaaagttg aaatttactt
     2041 atagtggttt tatgagcgat ttaaccgata aggaaagtaa aacacagtat tgtaaagctc
     2101 aagtaaaagc aaatggaagt attgattctc gcccttacaa atgggatgct tggatcgagt
     2161 attttgctag atatactgat gatggtatgg tatatgtaga aattactaga taacttttta
     2221 aggcaaaaat gccttaaaaa gttaatttta aggagactgg atatggatta taatgttttt
     2281 cttttaaata tacaagataa aataaatcaa gaagattttt tcaatttaaa gcttaagttt
     2341 gaacaattgc aaaataaaaa agaagcttta tcaaatttgg tatttttaag acttcaagat
     2401 cctataaaac ctctaattat gagtatgata tgtggttttt ttaagtttag gttggttggc
     2461 aatcgataga tttatgataa aagactatgc attaggaata ttgcgtataa tattatcttt
     2521 atttccttgt gtgttatttt tgatactagg aattagctat gaaaatgatt ctaactcgga
     2581 tatttctgaa atttttttcg ggttgtttgg aatttttcta ttattgggca
//
LOCUS       DAQUWA010000125         2511 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.125, whole genome shotgun sequence.
ACCESSION   DAQUWA010000125 DAQUWA010000000
VERSION     DAQUWA010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.125"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..283
                     /locus_tag="R8X70_001863"
     CDS             <1..283
                     /locus_tag="R8X70_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929609.1"
                     /translation="ENKAFNLQNKEYFEFFYALGLIEDEESKDVNFKNSNFKMLKILK
                     ENSFKARLEFSYRCTECKSVMPLFFYHCPVCYEFNTCQIIYEVKNNETY"
     gene            270..710
                     /gene="rnhA"
                     /locus_tag="R8X70_001864"
     CDS             270..710
                     /gene="rnhA"
                     /locus_tag="R8X70_001864"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEF2929610.1"
                     /translation="MRHIEIYTDGSCLKNPGFGGWAYILRYNQHQKEGFGAEANTTNN
                     RMELKAIIEALKALKEPCEISLFTDSNLMVQSINEWLEAWIKKDFKGKKNVDLWKEYI
                     DVAKPHKIKAYWIKAHNGHLENERCDTLAREAALKIARENDEKY"
     gene            697..1371
                     /locus_tag="R8X70_001865"
     CDS             697..1371
                     /locus_tag="R8X70_001865"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEF2929611.1"
                     /translation="MKNIELLEQKLAYKFKDKDLLIHALTHKSFKKPYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSAAEENN
                     GGKEKPSILSDALEAIMGAIHLEAGFDFARNIALKLIEKNFPQIDAKNLIKDYKTKLQ
                     EITQAKLGQTPQYETVRAFGPDHLKQFEIALFLNGQELARAIAGNKKEAQQMAAKITL
                     EKLGAL"
     gene            1371..2462
                     /gene="aroC"
                     /locus_tag="R8X70_001866"
     CDS             1371..2462
                     /gene="aroC"
                     /locus_tag="R8X70_001866"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEF2929612.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCVIDGMPAGVKFDEEFLQSELD
                     KRKGGSKFATPRKEGDRVQVLSGVFEGYTTGHPIAMVVFNENTHSKDYDNLKDLFRPA
                     HADFTYFHKYGIRDHRGGGRASARESVARVAAGAVAAMLLREFGICVRSGVFGVGNFI
                     SNLKEEELDFEFAKQSEIFCLDPNLEDEFKKEILSARNSKDSVGASVYTRAKGMLVGL
                     GEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSQNNDALKGGEFLSNHSGGI
                     LGGISNGQDLILKTYFKPTPSIFLKQSSMDKFGNDLEFELKGRHDPCVGVRGSVVVSA
                     MVRLVLADCLLLHASANLNNLKNAYGIKK"
BASE COUNT          888 a          306 c          532 g          785 t
ORIGIN      
        1 agaaaataaa gcttttaatc tacaaaataa agaatatttt gaattttttt atgccttggg
       61 tttgatagag gatgaagagt ctaaagatgt aaattttaaa aattctaatt ttaaaatgct
      121 aaaaatttta aaagaaaatt cctttaaagc aaggcttgaa ttttcatatc gttgcacaga
      181 atgcaaaagc gtaatgcctt tgttttttta tcattgccct gtttgttatg aatttaatac
      241 ttgtcaaatt atttatgaag tgaaaaataa tgagacatat tgaaatttat actgatggtt
      301 cttgccttaa aaatccaggt tttggaggat gggcttatat cttacgctat aatcaacatc
      361 aaaaagaagg ttttggagca gaagctaata ctacaaacaa tagaatggaa ttaaaagcga
      421 ttatcgaagc tttaaaagcc ttaaaagaac cttgtgaaat ttcacttttt acagactcta
      481 atttgatggt tcaaagtatt aatgaatggc tagaagcttg gataaaaaaa gatttcaagg
      541 gtaaaaaaaa tgtagattta tggaaagaat atatcgatgt ggcaaaaccc cataagataa
      601 aagcttattg gataaaagca cataatgggc atttagaaaa tgaaaggtgt gatactttag
      661 cacgcgaagc tgctttaaaa attgcaaggg aaaatgatga aaaatattga attattagaa
      721 caaaaattag cctataagtt caaagataaa gatcttttaa tccatgctct aactcataaa
      781 agttttaaaa aaccttacaa taatgagcgt ttggaattct taggcgatgc ggtacttgat
      841 ttagttgtgg gtgaatatct ttttcataaa tttgctaaag acgctgaggg ggatttgtca
      901 aaattaagag cggctttggt caatgaaaaa tcttttgcaa agatcgcaaa tagtttaaat
      961 ttgggcgatt ttatttttat gagcgcggct gaagaaaaca atggaggtaa agaaaagcct
     1021 tctatacttt ctgatgcctt agaagcgatt atgggggcta tacatttaga agcgggattt
     1081 gattttgcaa gaaatatcgc tttaaagctt atagaaaaaa acttcccaca aattgatgca
     1141 aaaaatctca ttaaagatta taaaacaaaa ctgcaagaaa ttacacaagc aaaattagga
     1201 caaaccccac aatacgaaac cgtgcgtgct tttggacctg atcatttaaa acaatttgaa
     1261 atcgctttat tccttaatgg acaagagctt gcaagagcca ttgcgggaaa taaaaaagaa
     1321 gcacagcaaa tggcagcaaa aattacactt gaaaaattag gagctttata gtgaatactt
     1381 ttggtacaag attaaaattt acaagttttg gagaatccca cggagtggca gtgggttgcg
     1441 tgattgatgg aatgcctgca ggggttaaat ttgatgaaga gtttttacaa agcgaacttg
     1501 ataaacgcaa gggtgggagc aaatttgcaa ctccaagaaa agaaggcgat agggtgcagg
     1561 ttttaagcgg ggtatttgaa ggttatacca cgggtcatcc tattgctatg gttgtgttta
     1621 acgaaaacac acattctaag gattatgata atttaaaaga tttatttcgt cctgcccatg
     1681 ctgattttac ttattttcat aaatacggca taagagatca cagaggaggc ggaagagcta
     1741 gtgctagaga aagtgttgct agagtggctg cgggtgctgt tgcagctatg cttttgcgtg
     1801 aatttggtat ttgtgttcga agtggggttt ttggagtagg aaattttatt tcaaatttaa
     1861 aagaggaaga attggatttt gaatttgcaa aacaaagtga gattttttgc ttagatccta
     1921 atttagaaga tgaatttaaa aaagaaattt taagcgctag aaactcaaaa gatagtgtgg
     1981 gtgcttctgt ttatactaga gctaagggaa tgcttgtagg acttggagaa gtgctttatg
     2041 ataaattaga ttctaaatta gctcatgcct taatggggat taatgctgta aaagctgttg
     2101 agataggcga ggggattaat gcgagtaaaa tgcgaggctc gcaaaataat gatgctttaa
     2161 aagggggtga gtttttaagt aatcacagcg gagggatttt aggaggtatt tcaaatggac
     2221 aagatcttat tttaaagact tattttaaac ctactccttc tattttttta aagcaaagca
     2281 gtatggataa atttggaaat gatttagaat ttgaactcaa aggcagacat gatccttgtg
     2341 taggtgttag aggtagtgta gtagtgagtg ctatggtgcg tttggttttg gctgattgtt
     2401 tattgcttca tgcaagtgct aatttaaaca atttaaaaaa tgcttatggg ataaaaaaat
     2461 gataaagccc atttttgggc tttaatttgc aatattttga aaagatttaa c
//
LOCUS       DAQUWA010000126         2459 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.126, whole genome shotgun sequence.
ACCESSION   DAQUWA010000126 DAQUWA010000000
VERSION     DAQUWA010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.126"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            175..1194
                     /gene="mutY"
                     /locus_tag="R8X70_001867"
     CDS             175..1194
                     /gene="mutY"
                     /locus_tag="R8X70_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEF2929613.1"
                     /translation="MQKQMIQNLQDKLLLWYDKNGRKNLPWRNLESKDCDERLKDIDR
                     AYGVYISEIMLQQTQVKSVLEKFYFPFLQKFPTLQSLAKANENELLKAWQGLGYYTRA
                     RNLKKAALECVDKFEGKLPKKLDELKNLSGIGTYTAGAIACFAYDQKVSFVDGNIRRV
                     LSRLFALENPKMSELERKAKELLNLADAFNHNQALLDIGALICVSKNAKCGICPLYDF
                     CQGKFNTELYPGIKKTSYENANLSLFVFEWDKKFAIQKSQDKLYKGMYNFPFFKKEEG
                     EIFKNMKLLGEFKHHYTKYKLNIKVYHQILKEENKNYQFKSLKELESTALSILSLKAL
                     RLIKL"
     gene            complement(1180..2442)
                     /locus_tag="R8X70_001868"
     CDS             complement(1180..2442)
                     /locus_tag="R8X70_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEF2929614.1"
                     /translation="MQELTRAKKIRSIVAASSGNLVEWFDFYIYAFTATYFAHTFSTS
                     DNPIVQQINAFGVFAAGFFMRPIGSWLFGSLADKVGRKKSMVVSVVLMALGSFMIAAL
                     PSKDVVGDFAIILLLLARLIQGLSVGGEYGIAATYLSELATEGKRGFYSSFQYVTLIG
                     GQLLAVASISIMLFFFSIDEMKDYAWRILFVVGGILALGSLLVRKVMNESATQIHKHE
                     DRGTLKALFTSSWKQFLMVLGITAGGSLAFYTITTYTKTFMENSGMDKTLVNNLFLGA
                     LFILMIIQPLFGYIGDKIGHKRSLIIFCILAFVGIYPIFNLISSNAQSNASLVFILVV
                     LLFIILSFYTSVAGIFKAKLFPEHVRALGTGLGYAISNAIFGGSAPWVALQFKNAGME
                     NGFFVYIAVLTLLMFIATLCLPKKSELN"
BASE COUNT          901 a          390 c          410 g          758 t
ORIGIN      
        1 tttgaattta tatttaagtt gtgtttattt ttgcattttt attatttgta gctttgtatt
       61 gtatgtaaaa tgggattttt atataaattg ataaaatgat ttttgatttt aattattaaa
      121 atatcactat aatacattat aaatttttat gcaatttttg ttatactcta acccatgcaa
      181 aaacaaatga ttcaaaattt acaagataaa ttacttcttt ggtatgataa aaatggacgc
      241 aaaaatttgc cgtggcgcaa tttagaaagt aaagattgtg atgaaagatt aaaagatatt
      301 gatagagctt atggagttta tatcagtgaa attatgctcc agcaaactca ggtaaaatca
      361 gttttagaga agttttattt tccttttttg caaaaatttc ctaccttaca aagtttagct
      421 aaggcaaacg aaaatgagct tttaaaggct tggcaggggc ttgggtatta cactcgtgct
      481 agaaatttaa aaaaagcagc tttagagtgt gtggataaat ttgaaggcaa attacccaaa
      541 aaacttgatg aattaaaaaa tttaagtggt ataggaactt ataccgcagg agccattgct
      601 tgttttgctt atgatcaaaa agtttctttt gtagatggca atatacgccg tgtgctttca
      661 cgcctttttg ccttggaaaa tccgaaaatg agtgagcttg aaagaaaggc taaggagctt
      721 ttaaatttag cagatgcttt taatcacaac caagccttac ttgatatagg tgctttaata
      781 tgtgtgagta aaaatgcaaa atgtggaatt tgccccttgt atgatttttg ccaaggaaaa
      841 ttcaatacag agctttatcc tggaattaaa aaaacatctt atgagaatgc aaacttaagt
      901 ctttttgtat ttgaatggga taaaaaattt gctatacaaa aaagtcaaga taagctttat
      961 aagggtatgt ataattttcc tttttttaag aaagaggaag gcgaaatttt taaaaatatg
     1021 aaattgttag gagagtttaa acatcattat acaaagtata aattaaatat taaagtttat
     1081 catcaaattt taaaagagga aaataaaaat tatcaattta aaagcttaaa agaattagaa
     1141 agtaccgcac tttcgatact ttctttaaag gctttaagat taattaagct ctgatttttt
     1201 aggcaggcac aaagttgcta taaacataag cagagtaagc acggcgatat aaacaaaaaa
     1261 gccattttcc attcctgcat ttttaaattg taaagccacc caaggtgcag atcctccaaa
     1321 gatggcatta gatatcgcat aacccaagcc tgtgcctaag gctcttacat gttcagggaa
     1381 aagtttggct ttaaaaattc cagccactga agtataaaaa cttagaataa taaataaaag
     1441 caccactaag ataaacacta aagaagcatt gctttgagca ttgcttgata taagattgaa
     1501 aataggataa attcctacaa aagctaagat acaaaagatg attaaggatc gcttatgtcc
     1561 tatcttatcg ccgatatatc caaaaagcgg ttgtataatc ataagtataa ataaagcacc
     1621 taaaaagaga ttattaacca gtgttttatc catacctgaa ttttccataa aagttttggt
     1681 ataggtagtg atagtataaa atgccaaaga tccacctgca gtgataccaa gtaccattaa
     1741 aaattgtttc caagagcttg taaataaagc tttgagtgtc cctctatcct catgtttgtg
     1801 aatttgtgtc gcgctttcat tcatcacttt gcgcacaaga agagaaccaa gggctaaaat
     1861 tccacccaca acaaaaagta ttctccaagc ataatctttc atttcatcaa tgctaaaaaa
     1921 gaaaagcatt atactaatac tagctactgc taaaagctgt ccgcctatga gggttacgta
     1981 ttggaaagaa gagtaaaaac cccgcttgcc ttctgtggca agttcggaaa gataggtcgc
     2041 tgctatgccg tattccccac ctacacttag tccctgtatg agtcttgcaa gtaaaagcaa
     2101 gataatagca aaatccccca ccacatcttt actaggtaaa gctgctatca taaaagagcc
     2161 taaagccatt aaaaccacag atacaaccat ggatttttta cgacccactt tatcagctaa
     2221 agaaccaaaa agccaagagc ctataggacg cataaaaaag cccgcagcaa agactccaaa
     2281 agcattgatt tgctgcacga taggattatc agaggttgaa aaagtatgag caaaataagt
     2341 tgctgtaaaa gcataaatat aaaaatcaaa ccattctacc aaatttccgc tacttgcagc
     2401 tacaatagaa cggatttttt tcgctcgagt aagttcttgc ataaaatttc cttcatttt
//
LOCUS       DAQUWA010000127         2440 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.127, whole genome shotgun sequence.
ACCESSION   DAQUWA010000127 DAQUWA010000000
VERSION     DAQUWA010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.127"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            2..787
                     /locus_tag="R8X70_001869"
     CDS             2..787
                     /locus_tag="R8X70_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HEF2929615.1"
                     /translation="MLILFFSLLNADELDNALKNNQNKWQKFNYQATQKAPTIKEENI
                     DFKSALNGILSNVLENKNGIDKTDGNLDFQNENVQIKNLNSLYEGENNSLLFQKEFYA
                     TQDSYNYSGGLINRYEKDDFLLGINGFIDGQKEQKESKSFGAELGYYQFVKAYSNYYV
                     PNEADENLQFGVSFTIPSYSAFIFDISKDSEKINYQVSYSPYSVLSLKILRRDFSANE
                     AIDDTVLQVGFSFNFNESFVKQLRKKDNALQEVNRYDFLQRVR"
     gene            complement(889..2264)
                     /locus_tag="R8X70_001870"
                     /pseudo
     CDS             complement(889..2264)
                     /locus_tag="R8X70_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
BASE COUNT          888 a          368 c          382 g          802 t
ORIGIN      
        1 tatgcttata ctttttttct ctttgctaaa tgccgatgag ttagataatg ccttaaaaaa
       61 taatcaaaat aaatggcaaa aatttaatta tcaagctacc caaaaagcac cgacaataaa
      121 ggaagaaaat attgatttta aaagtgcttt aaatggtata ttatctaatg tattagaaaa
      181 taaaaatggt attgataaaa cggatggaaa tttagatttt caaaatgaaa atgtgcaaat
      241 taaaaattta aactcgcttt atgaggggga gaataattct ttgctttttc aaaaagaatt
      301 ttatgctaca caagatagtt ataattattc aggtggttta atcaatcgtt atgagaaaga
      361 tgatttttta ttgggtataa atggctttat tgatgggcaa aaagagcaaa aagaaagtaa
      421 aagctttgga gctgaattgg gttattatca atttgtaaaa gcttatagta attattatgt
      481 tccaaatgaa gcagatgaaa atttgcagtt tggagtaagt tttactatac catcttatag
      541 tgcttttatc tttgatatca gcaaggatag tgagaagata aattatcaag tgtcgtattc
      601 gccctatagt gttttgagtt taaaaatatt acgccgtgat tttagtgcaa atgaagctat
      661 tgacgatact gttttgcagg tgggttttag tttcaatttt aatgagagct ttgtgaagca
      721 acttagaaaa aaggataatg ccttgcaaga agttaatcgt tatgacttct tgcaaagggt
      781 gcgttaaggt tttagtttca attttaatga gagctttgtg aagcaactta gaaaaaagga
      841 taatgccttg caagaagtta atcgttatga cttcttgcaa agggtgcgtt aatgcatacc
      901 agcattgtgg aatttttctg gattatctag agcgtagcgg aatttttccc aattaatttg
      961 tttatcccag atagcaacga ttaaggctgc tactgaattt ccacaaagat ttccaaccgc
     1021 tctcatttct gacataaatt tatcaacccc taaaagaact cctatcgcag ctacaggtaa
     1081 aacttgtgct aaagttgcat ttgcttcaga aatttccata ttgcctaaag cggctagagt
     1141 acttccaaga acaataaatc ctgatcctgt aacacctact gcaccttttg aagctatcat
     1201 caagactatt agaatactta tttcatgagc taagcttaaa tttacattga aagcttgagc
     1261 taagaaaatc aaactcatag ctaggtatat attggtacaa tcaagattaa aactataacc
     1321 tgttggtaaa acaagtccga cagtggcctt agaaagacct gctttttcaa gttttctcat
     1381 caaaggagca agagcggatt cgctagagct tgttgcaaat actataagta cttctctaga
     1441 aataaagcgc ataaatttaa atatattgac ttttgcaaaa taacaaatta aacctaaaat
     1501 tccaaaaata aaaataagac atgaaatcag cattactaaa agtaaatatg ctaagttgat
     1561 caaagagcca attccgtatt gagctatgag tacagccatt gctgaaaagg cggcaatagg
     1621 actaaaatac ataatgattt gtagaatttt aaaaacaaaa ttttgcacca cttcaaaaac
     1681 tctttgaatt gcctgtttat cttctattct cattaaagaa ataatcaaag cagtaattat
     1741 agcaataact aaaacttgta tggtttttcc ttctgtaaaa ggcgtgataa tatcagtagg
     1801 catagcatct tttaaaatat gcatgatctc tgaacttgca cttacttcag ttgtttgaga
     1861 aatgtatttt tgcacgcttg tagtatcaag ttgttttgga tcaagattca tcccgtgacc
     1921 aggttgcatt atgtttgcca taaaaatacc tatagcaagt gctaaagtac ttacaacttc
     1981 aaagtaaata accgctttag caccaatgct acctactttt ttaaactttc aagactaatg
     2041 atgcctaaaa ccaaagtaac aaaaataata ggaccaataa gaacttttaa agcgcttata
     2101 aaataatcaa ctccaggttt actcgctata gccatttctt tatttacata gccaagcaca
     2161 atgcctgcaa caatacctac aataacccaa aaacccaaac ttttaaacat gcgtttatat
     2221 aaaggcggtt ttctttcagc taaagtttga cttaaagttt ccaaaataac tccttataat
     2281 tccactttta gagattaagt taattctaaa agtttagcaa aaaataaata gaacatagtt
     2341 taaataatta aaattaagtt tttggtaaaa ccaatttttt aaatcatgtt actaaatttt
     2401 tcaattatta tgattttatt tatcttataa atatcataat
//
LOCUS       DAQUWA010000128         2428 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.128, whole genome shotgun sequence.
ACCESSION   DAQUWA010000128 DAQUWA010000000
VERSION     DAQUWA010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.128"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(56..379)
                     /locus_tag="R8X70_001871"
     CDS             complement(56..379)
                     /locus_tag="R8X70_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929616.1"
                     /translation="MKRGFAKIEFFANLEYLKQEYNKGYVVSKILYEKAKQDKNISMV
                     YSQFNKYFNEVFKNKIEKKEITQENNQSLALENKEPIKLKIDTKSKKVFDAKFGKDIK
                     EDDLL"
     gene            complement(665..901)
                     /locus_tag="R8X70_001872"
     CDS             complement(665..901)
                     /locus_tag="R8X70_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929617.1"
                     /translation="MQKQYPEVHSLEESLAILKKYKDDLTKEQYEQNKSIICGFAIEN
                     MFANEEDIINLIKVDKQEKTPDEIIAEYKREWGV"
     gene            complement(911..1684)
                     /locus_tag="R8X70_001873"
     CDS             complement(911..1684)
                     /locus_tag="R8X70_001873"
                     /inference="COORDINATES: protein motif:HMM:NF013235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HEF2929618.1"
                     /translation="MTPREFRKRQLEKLEQRKIQTHQKISNDFIDNTISKNNLVCLKV
                     MFYLSTVLEKEDLSTFDDENIICVFVDTKQMLEYIGSNVKDIRNNLKQMQETSISFVD
                     EKENIVEGMNLLPLFKIEYGKNRTEIHLFKRIANMIVGVSKNYTFLNTKLLMDIKNKN
                     TLRMAPLLYEINGYDKHTGKRKRMDLDALNDFFGTTYKRIIDIEKNILQPVKKELDLV
                     SKLSFTYQVNFDTLNKVGRPRALAVTIDLKDNQGNLFAN"
BASE COUNT          778 a          337 c          294 g         1019 t
ORIGIN      
        1 aaaaaaacaa tataaagtat tactgatatg aaaaaaatcg attttagagc tatttttata
       61 ataaatcatc ttctttgata tcttttccaa atttagcgtc aaatactttt tttgattttg
      121 tgtcaatctt tagcttgata ggttctttat tttccaaagc taaagattga ttattttcct
      181 gtgttatttc ttttttctct attttatttt taaaaacttc attgaagtat ttattaaatt
      241 gtgaataaac cattgatata tttttatctt gctttgcttt ttcataaagt attttagaaa
      301 ctacatagcc tttattatat tcttgtttta agtattctaa attagcgaag aattctattt
      361 ttgcaaaacc tcttttcatt gcaaatcctt tataaaatag tatattataa gatattttag
      421 tatattttag caaattatag tgtattttaa taaaatgatt gaaatgtttg taaaaatagc
      481 ttatattttg ttataattgc ttggagtaat aagacaggat atgtaaatgt cgaacattta
      541 caaagtttta tcgctaaagc tctaaaatta ggacgccaaa aaaataaatt gcaaataaga
      601 aaatatttat gcaggttgtt ttttaggatt gcaatgagcg gtggcaactt ttgacatttt
      661 gcattcatac tccccattct cttttatatt cggcgattat ttcatcaggt gttttttctt
      721 gtttatctac ttttatgaga tttataatgt cttcttcatt tgcaaacata ttctcaatag
      781 caaatccaca aataatagat ttattttgct catattgctc tttagttaaa tcatctttat
      841 attttttaag tatcgcaagg ctttcttcta agctatgcac ttcgggatat tgtttttgca
      901 tttttactcc ttaattagca aataaatttc cttgattatc ttttaaatct attgttacag
      961 ctaaagctct aggtcgtcca actttgttta atgtgtcaaa atttacttgg tatgtaaagc
     1021 taagttttga gactaaatcg agttcttttt ttacaggttg taaaatattt ttttctatat
     1081 caataattct cttatatgtc gttccgaaaa aatcatttaa agcgtccaaa tccattcttt
     1141 ttctttttcc tgtatgttta tcatagccat ttatttcata taaaagcggt gccattctta
     1201 gagtgttttt gttcttgata tccattaaaa gctttgtatt aagaaaagtg tagtttttac
     1261 ttactcccac aatcatattt gctatacgct taaaaagatg aatttcggtg cgattttttc
     1321 catattcgat tttaaataaa ggcaataagt tcataccttc tacaatattt tccttttcat
     1381 ccacaaaact gatactagtc tcttgcattt gttttaaatt gtttctaata tccttgacat
     1441 ttgagccaat atattcgagc atttgttttg tatctacaaa aacgcaaatt atattttcat
     1501 catcaaatgt agataaatcc tctttttcaa gaactgtaga aagatagaac ataactttta
     1561 aacacactag attattttta ctgattgtgt tatcaataaa atcattactt atcttttgat
     1621 gagtttgtat ttttcgttgc tctaactttt cgagttgtcg ttttctaaat tctctaggtg
     1681 tcacaagttt atccttttag tgagtttttt aaattatata ctaactttac ttaaagtaag
     1741 cttttaagat taataactca ctttattttt tgatattttt taaaaaaatg ctttaaataa
     1801 ctatatatta attttagtga gttattaaaa taaatctcac taaaaatact ttatactcac
     1861 taaaatggaa aaataggcat ttgtaatttt taaggttttc aatgtttcac agccattttt
     1921 taagaatttc acaagaaatt cgtttaaaat gtgaaattat agcggtttga taatttagtg
     1981 agtttttaac cttaaaaagt ctgtaaatta tttttttagg ctcaaatagc cattatatca
     2041 gtgtttgtat gctttcttat ataaaactta aatgaactta ttttctcact aaattagatt
     2101 ataaaatcac taaattagat tataaaatca ctaaattatt ttgtgaaaca cctataaaat
     2161 aggcatttga cagacttttt cacaccccta taatagtttt tataatagtt tttataaatc
     2221 aaagagttta atttttcaca ctgtttttgc ttaaagacat ttttgatgat atacattagg
     2281 aagggggctt gtccgttcgt tagctctagg ctaacttcac gcccccttac cccaattacc
     2341 gcaaatcata gcacctttaa ggtgcgattt gctaagctaa ttaatagcgt ttattctttc
     2401 aaaaaagggg taaaaatcga ttttaatt
//
LOCUS       DAQUWA010000129         2310 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.129, whole genome shotgun sequence.
ACCESSION   DAQUWA010000129 DAQUWA010000000
VERSION     DAQUWA010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.129"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..393
                     /locus_tag="R8X70_001874"
     CDS             <1..393
                     /locus_tag="R8X70_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEF2929619.1"
                     /translation="AGSGFSSQSGLSQFATMKTSAGNSLGAKDETAGVTTLKGAMAVM
                     DIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFS
                     KYNILAQSGSYAMSQANAVQQNVLKLLQ"
     gene            complement(424..2310)
                     /locus_tag="R8X70_001875"
     CDS             complement(424..2310)
                     /locus_tag="R8X70_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929620.1"
                     /translation="MREENNFNKNLKALSGFEYNNLRKKLEDLKELREFTFTQGKDNL
                     DINIIKKRNLKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALK
                     RIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDLFYRSY
                     NLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMRGNDPKDAMQGIEQFVYNLPQMITH
                     SSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIK
                     PDYVCMLERDEIVAECFNNDFKDFDKDIIFLVASLVHKKTISYLEKNQRKYMLIIKGQ
                     PFARCLGLDDYGYINAGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIH
                     ANLHNGDYERDLDKFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSKTYNCTEGGA
                     RIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNF
                     KKECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQS
                     ILTPLYLKDIKDDSDKQNKLFAWIYAHESLMENIIELLEAQDKRLKIAILPLLDFLEK
                     KKAL"
BASE COUNT          746 a          350 c          336 g          878 t
ORIGIN      
        1 gcaggttctg gtttttctag tcaaagcgga ctttctcagt ttgcaactat gaaaacttca
       61 gcaggtaact ctcttggagc taaagatgaa accgcaggtg ttaccacact taaaggtgct
      121 atggctgtga tggatatagc tgaaacagcc acaacaaatc ttgatcaaat cagagcagac
      181 attggttcag tacaaaatca gcttcaagtt actataaaca acattactgt tactcaagta
      241 aacgttaaag cagctgaatc aaccataaga gatgtagact ttgcagctga aagtgcaaat
      301 ttttctaaat ataacatcct tgcgcaatca ggttcttatg ctatgagtca ggctaatgca
      361 gtgcagcaaa atgttttaaa acttcttcaa taatttctta gatgctttta tgcatctaag
      421 cttttaaagt gcttttttct tttctaaaaa gtctagcaaa ggtaaaatag cgattttaag
      481 tcttttatct tgagcttcta aaagttctat gatattttcc atcaaagatt catgcgcata
      541 aatccaagca aaaagtttat tttgtttatc ggagtcatct ttgatatctt taagatataa
      601 aggcgttaat atactttgtt cgtgatgtaa agtagggcct aaaatttctt gcaaaaagag
      661 atatttttta tttgaaagtt tttctttgat tttgtctata ttttgattta tttgttcaag
      721 agagagtttg ttctttccat gggtaagatt gtgaatttgt ttttgaactt ttttacactc
      781 ttttttaaaa ttcaaggata aattcatatt ttttttgatt ttttgataga tttttaatcc
      841 gagttttact tgttctttag tatttaaaac ttgtaatttt ttaaattttt tatctttttt
      901 atttttgagt aaatcttcgc aaagttcttt aaaaggtttt tctatagcgc tttctatcct
      961 agcacctcct tcagtgcaat tataagtttt acttttgcta aaagcaatga aattttcaaa
     1021 aatttgtcta aaaagtgtcc aaatttcaga actttgaact ttgccatttc ctccataagc
     1081 tgtagtgcta aatttatcta agtccctttc atagtctcca ttatgtaaat tagcatggat
     1141 aaaaccttga gagtgtgttt gcccatcttt ggcataagct aaatcctgac ctatgagaat
     1201 gatgttttta tgtcctaaat tttcagccag ttcataagcc atatgagata cactcatgcc
     1261 cgcgttaata tatccataat cgtctagccc caagcatcta gcaaaaggct ggccttttat
     1321 gattaacata tattttcttt gatttttttc aagataagaa atggtttttt tatgcaccaa
     1381 agaagctact agaaaaatga tgtctttatc aaaatcttta aaatcattat taaaacattc
     1441 agctactatt tcatcgcgtt ccaacataca aacataatca ggctttatgc catgcttagc
     1501 taaaatagga taagaagaat ccgcacaaaa aatcgtagct ttattagcat atttttttaa
     1561 taaaggaagt tgtttagtaa gagatggtcc tgtagaaaca atgatagctg tatcacttat
     1621 accctttctt ttagaaagta attctttata actagaatgg gtaatcattt gaggaagatt
     1681 ataaacaaat tgttctatac cttgcatggc atctttagga tcatttccac gcataagatt
     1741 gtgatttttg atgatttgca tgttgagttt attaagtttt aaaatatctt ctttatagtg
     1801 ttcataaaaa tcattagcaa tgtgtagatt ataagaacga taaaacaaat cccctatcaa
     1861 acgaaaaact ttatccattt taggaagatt aatatcatca tgatgtaaaa taatgagtcg
     1921 ccctaagctt aaatctttgc taaaatctat gaaatttaaa gccaaaaaga taagttctaa
     1981 ttctttttca aagatgatta ttcttttaag tgcttgattt tgaagtagaa ttttatataa
     2041 aattccattt ccaaaaccat aaaaaaaaag cacaggatag cgtgtaaaat ctttaaaata
     2101 ttctaaattt ttttcaagct ctttgatggg atcttgatac atttttttta aatttctttt
     2161 ttttatgata ttgatatcaa gattatcttt tccttgagtg aaagtaaatt ctctaagctc
     2221 ttttagatcc tcaagttttt tgcgtaagtt gttatactca aaaccgctta aagcttttaa
     2281 atttttgtta aaattatttt cttctctcac
//
LOCUS       DAQUWA010000130         2263 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.130, whole genome shotgun sequence.
ACCESSION   DAQUWA010000130 DAQUWA010000000
VERSION     DAQUWA010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.130"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..378)
                     /locus_tag="R8X70_001876"
     CDS             complement(<1..378)
                     /locus_tag="R8X70_001876"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929621.1"
                     /translation="MDNKILIQKLRDNAELAWASYGYFHLLKDSKGISRKRYALDEQG
                     NKITDNSYLRGYKEIEATFADILNLQLNRQEVLINQTTSNEFLSSILNKLDDTFNFDA
                     LKGEFSPLQAKQFFSRYDLLKHCP"
     gene            complement(396..650)
                     /locus_tag="R8X70_001877"
     CDS             complement(396..650)
                     /locus_tag="R8X70_001877"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929622.1"
                     /translation="MKKHIIFIIFVVYLIACFLFALLAGAIGHGATPYKIATFFITLV
                     VAPLVPYVIVSLVIDTYKQFQWWKILNLIFLIIPIYIFFY"
     gene            complement(677..1078)
                     /locus_tag="R8X70_001878"
     CDS             complement(677..1078)
                     /locus_tag="R8X70_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929623.1"
                     /translation="MDNKGLITKLRDNSELAWAAYGYFHLANPRYDFNKDNIDKERLE
                     YFRKLYKNNNLESSKTDEQLQSIYPTPADILNIEYKYFKDNNGKPKDSWYHKYFLGGE
                     FSPLQAKQFFSRYDLLKHCPNTDSGFSATLF"
     gene            complement(1839..2219)
                     /locus_tag="R8X70_001879"
     CDS             complement(1839..2219)
                     /locus_tag="R8X70_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine synthase"
                     /protein_id="HEF2929624.1"
                     /translation="MLSNGCKYYRNDYNYKIGESNFNFKDKPEFAYYEDQFKAYMGEE
                     NYKKLRPYLGMTTYYVCEGKKYPVVFSTMIDYKVKNYGLFGDEGRGFSFSSISRKSAG
                     GGSFHYFTNGKFIKSDEKYTGQSY"
BASE COUNT          747 a          333 c          299 g          884 t
ORIGIN      
        1 aggacaatgt tttaataaat catagcgaga aaagaattgt ttagcttgga gtggggagaa
       61 ttcgcctttg agagcatcaa aattaaaagt atcgtcaagt ttatttaata tgcttgataa
      121 aaattcattg cttgttgttt ggtttatcaa gacttcttgc ctatttaatt gaagatttaa
      181 aatatctgca aaagtagctt ctatttcttt atatcctcgt aaatatgaat tatcagtaat
      241 tttattgcct tgctcatcta aggcatatcg ttttcttgat attcctttgc tgtcttttag
      301 caaatggaaa tatccgtaac tcgcccaagc taattccgca ttgtctctaa gtttttgtat
      361 taatattttg ttatccattt gcttacctcc ataatctagt aaaaaaaaat atatattggt
      421 ataatcaaga atattaagtt taaaattttc caccattgga attgtttgta tgtatctatt
      481 actagactga ctatcacata gggaactaat ggtgcaacaa ctagcgtgat aaaaaatgtt
      541 gctattttat atggcgtagc tccatgccca atagctcctg ctagtaatgc aaaaagaaaa
      601 caggcaataa gataaactac aaatataata aaaataatat gttttttcat ctcatttatt
      661 ccttagtttc tttttcttaa aagagagtag cagagaaacc tgaatctgta ttaggacaat
      721 gttttaataa atcatagcga gaaaagaatt gtttagcttg gagtggggag aattcgccgc
      781 ctaagaaata tttatgatac caagaatctt tcggtttgcc attattgtct ttaaaatatt
      841 tgtattctat attaagaatg tctgcagggg tagggtaaat ggattgtaat tgttcatcgg
      901 ttttactaga ttctaaatta ttgtttttat ataattttct aaaatactct aatctttctt
      961 tgtctatgtt atctttattg aaatcatacc ttggattagc cagatgaaaa tatccataag
     1021 ctgcccaagc aagttctgaa ttgtctcgta atttagtgat caatccttta ttgtccattt
     1081 ttgctccttt gtattgaagt acaaactgca atattcttct atctccatcc actcaatatt
     1141 ataactagcc atagattctt gctctaaatt gtaacgtctt gtattccaag tatcaagtaa
     1201 aattattgat gtaatgttat ctttagagat aagtttttta ttgctataca gaatagccat
     1261 tatatcatat ctagtctttt ttatttctcc tatatatgtt gcatattcta aaattttgca
     1321 aatagaattg ctgttcttta cttattttat aagctcttct attcaactcc tcccaatcta
     1381 atgtatccaa acttaatcca aaataactta gtatcttatt atatttctct tcgttattag
     1441 gaagttcatt taacttacac atattcctaa attgccaata actaggctct aaataataag
     1501 aataaggagt ataataaaag ataattaagc ctatacttcc aagaaagact aaaaacctta
     1561 aaacgctttt tgtagattta aagatgattt tataaataaa ttttaatata agataagaaa
     1621 gaatagtaga aattataata agaagtaata tgtatatcat gggttatctc cttagactct
     1681 ctattttatt aaaattaaga tatagtttat aagttatatt cagcagtata actttttctt
     1741 tatcattaaa ataatagagc ttgttttttc atatattttt atcctttata gtttatattt
     1801 ttagtctttg atttgagaga taagttcttt aggattcatc agtaactttg tcctgtatat
     1861 ttttcatcac tttttataaa tttaccattg gtaaaataat gaaaagatcc tccgcctgca
     1921 cttttacgac ttatgcttga aaagctaaat cctcttcctt catctccaaa taaaccatag
     1981 ttttttactt tataatctat catggtggaa aaaacaacag gatatttttt accctcacac
     2041 acataataag ttgtcatacc taaataaggt cttaattttt tatagttttc ttcacccata
     2101 tatgctttaa attgatcttc atagtatgca aattcgggtt tatctttgaa gttgaagttt
     2161 gattctccta ttttataatt ataatcatta cgataatatt tacaaccatt agaaaggatt
     2221 tgggggaatt ttttctatga cttttaattg atcccaaaaa tca
//
LOCUS       DAQUWA010000131         2261 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.131, whole genome shotgun sequence.
ACCESSION   DAQUWA010000131 DAQUWA010000000
VERSION     DAQUWA010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.131"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..910
                     /locus_tag="R8X70_001880"
     CDS             <1..910
                     /locus_tag="R8X70_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2929625.1"
                     /translation="FSHTLREHLVDNAFNKNSNSVKLNIELSDNSKNIFAYSIEFNKE
                     YVLKETFLKNNKIIYKFENERATFDIYSKKENEQLGMFFSRKLSENIFYFLKDFEIEQ
                     KEIFINLINNIEVYMNSNYSKKYNFEFEENKKQYFLEHKESILEVFQLLDKTIKDFEF
                     KKYKKDEKNIYEIFFIRNGKKFNYQIESEGIKKIVYFADKITQIIKEGKIIFIDELDS
                     SISTLALILIFNNLINTEENHNGQLIVSSHNVLLFDVSFLNSQQIFLIQKDQHLESKI
                     RTYYDYDIRSEKKKAYIDYLKGLYDE"
     gene            903..1502
                     /locus_tag="R8X70_001881"
     CDS             903..1502
                     /locus_tag="R8X70_001881"
                     /inference="COORDINATES: protein motif:HMM:NF025084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RloB domain-containing protein"
                     /protein_id="HEF2929626.1"
                     /translation="MNKKTKPSIQIWCEGKTEEDYFNSLFKYLNYDNVKIDVKNLKNN
                     NSYKNILYKIEKAPYVDKLIIVMDLDRAKSDTSELKILEKLIKHIKNSKDKHLFLTLG
                     DFEDWLRFHFVDNSKNSKTNFYKKLGYSDSKNFKSSTNDLYSQILSKGGCIENAEKYF
                     CNIAVFCNKRCEINKNSLNNQTQSNLYYFRRLLEQYNGA"
     gene            complement(1657..1800)
                     /locus_tag="R8X70_001882"
     CDS             complement(1657..1800)
                     /locus_tag="R8X70_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929627.1"
                     /translation="MCKDRKYIEQRKVLWEKSFEAFKDDKVYQKEQLELAEAGINDGL
                     EED"
BASE COUNT          916 a          235 c          269 g          841 t
ORIGIN      
        1 tttttctcat acactaagag agcatttagt agacaatgct tttaataaaa attcaaattc
       61 tgtaaaatta aatattgaac tgtctgataa tagtaaaaat atttttgcct attctataga
      121 gtttaataaa gaatatgttc tgaaagaaac ttttttgaaa aataataaaa ttatatacaa
      181 attcgaaaat gagagggcta cttttgatat ttatagcaaa aaagaaaatg aacagctagg
      241 gatgttcttt tcaagaaagc ttagtgaaaa tattttttat ttcttaaaag attttgaaat
      301 agagcaaaaa gaaatattta taaatcttat aaacaatatt gaagtttata tgaatagtaa
      361 ctattcaaaa aaatacaatt ttgaatttga agaaaataaa aagcaatatt ttttagaaca
      421 taaagaaagc attttggagg tttttcaatt attggataaa accataaaag attttgagtt
      481 taaaaagtat aaaaaagatg aaaaaaatat atatgaaatc ttttttatac gcaatggaaa
      541 gaaatttaat tatcaaatag aatcagaagg tattaaaaaa atagtatatt ttgcagataa
      601 aataacccaa attatcaagg aaggaaaaat tatttttatt gacgaattag attcttcaat
      661 aagtacctta gctttaatac ttatatttaa caatcttatc aatacagaag aaaatcataa
      721 tggacaatta attgtttcat ctcataatgt tttattgttt gatgtaagtt ttttaaattc
      781 tcaacaaata tttttaattc aaaaagatca acacctagag agcaagataa gaacttacta
      841 tgattatgat attagaagcg aaaagaaaaa agcatatatt gattatttga aagggcttta
      901 tgatgaataa aaaaacaaag cccagtatac agatttggtg cgaaggtaaa acagaagaag
      961 attattttaa ttctcttttt aaatatctaa attatgataa tgttaaaata gatgtaaaaa
     1021 atttaaaaaa taataattca tataaaaaca ttctttataa aatagaaaaa gcaccttatg
     1081 ttgataagct tattattgta atggatctag atagagcaaa aagtgatact agcgagttga
     1141 aaattttaga aaaacttata aaacatataa aaaattcaaa agacaagcat ttatttctta
     1201 ctcttggtga ttttgaagat tggcttagat ttcattttgt agataatagt aaaaatagca
     1261 aaacaaattt ttataaaaaa ttaggatata gcgatagtaa gaattttaaa tcatctacta
     1321 acgatttgta ttctcaaata ttaagcaaag gtggatgtat agaaaatgct gaaaagtatt
     1381 tttgtaatat cgcagttttt tgcaataagc ggtgcgagat taacaaaaat tcactaaata
     1441 atcaaactca aagtaattta tattatttta gaagattatt agaacaatat aatggtgctt
     1501 aaattatatt ataaagaaat tctacttttt tctttgatat tgtgattata tacagataaa
     1561 tcaataatat ctaaaattgg tttctagcta agactaaata tttatgagta aaattatttt
     1621 ttgttatatt ttacaatttt gactgaaatt atataattaa tcctcctcta agccatcatt
     1681 aattcctgct tctgcaagtt caagctgttc tttttgatac actttatcat ctttaaaggc
     1741 ttcaaaactt ttttcccata aaacctttct ttgctctata tattttcgat ctttacacat
     1801 attaatcctt tttatttatc aggtttaaaa ccactatcta aaattatttt tgcattacac
     1861 ctttaagatg atcaaaacga tttaaagctt gcatattgct aactctaagc aatcttattt
     1921 tatcatcttt tttataaaac actttaaaaa cttcatcact ttgtttgtgt tttaccatat
     1981 catctaaagt aggactatct atgaattcat attctttggt aaaatcttca tttaaaacat
     2041 cgaataaatc ttgtttataa gcatttgatg aatggggatc gcaagaatga acatcaataa
     2101 tataatctta tatatttttt tgcatagtaa atcctttaaa aaatagtata aatttttatt
     2161 tttagaatga cttaaaatct tttttaattt ttataaatat taaggatatt atttttttat
     2221 attatgttga tgatcttttt tatcaaagtc ataaaatgtg a
//
LOCUS       DAQUWA010000132         2259 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.132, whole genome shotgun sequence.
ACCESSION   DAQUWA010000132 DAQUWA010000000
VERSION     DAQUWA010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.132"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..666)
                     /locus_tag="R8X70_001883"
     CDS             complement(<1..666)
                     /locus_tag="R8X70_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929628.1"
                     /translation="MDFFFVEYRDPLVGLIILTVLIFVVAVANYIWKVFASKDEEQKL
                     EKFIKKFEMDNIHKDLLRNEGLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKSKDKQ
                     EREFIFFALAKVYFKAGFLERAKEVLLQALKIRPRNIQTLKLLKIVYLKLRKYKENLE
                     LLGCLFELGENVKEEKEFLKALDFLASSLSDEEKKEHILKLQIDNNPMLGRFVFEKYH
                     IFLN"
     gene            736..>2259
                     /locus_tag="R8X70_001884"
     CDS             736..>2259
                     /locus_tag="R8X70_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEF2929629.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCVCPFHADKN
                     PSMHINPTKGFYHCFACKAGGDAFKFVMDYEKLSFTDAVEKIANLCNFTLSYTKEKNE
                     NKKELRTILPSLNAYFKSNLKHHKEALDYLYKRTLNDQDIAKFELGFAGSSEDSIRLF
                     HNEKIPLEDAMSVGALKKDENNEFYASFIWRITFPIYDHKDLLVGFGGRTLNPNVAAK
                     YVNSPQNILFDKSRIFYAFNIAKENIAKKKEMIVCEGYMDAIAFHKAGFNNAVAVLGT
                     ALTENHLPLIRRYEAKVILCFDNDEAGLNAATRSAFLLSTHKIDGKVALLEGGKDPAE
                     LVANNQSAKLHTLLEKGMDLGEFYIRRILSSFSLNSALDKQKALENIQKYTFSLEPLV
                     ASSYVGLVSKLLGVDEKLIVLTSNRKPSKTINFNTSFQQTQNHNPKSHITELELLNYL
                     KNNPNMHELFIKISDIRCFKHKVLLEKILEHKSYEDSDIREFESKNFSKDLSQIEFLW
                     "
BASE COUNT          826 a          353 c          325 g          755 t
ORIGIN      
        1 atttaaaaaa atatgatatt tttcaaaaac aaagcgtcct agcataggat tattgtctat
       61 ttgtagtttt aaaatatgct cttttttttc ttcatcactt aaactagaag caagaaaatc
      121 caaagctttt aaaaattctt tttcttcttt tacattttct ccaagctcaa acaaacaacc
      181 caaaagctct aaattttcct tatattttct taatttaaga taaacaattt ttaaaagctt
      241 tagggtttgt atatttctgg gtcgaatttt taaagcttgc aataaaactt cctttgcgcg
      301 ctctaaaaac cctgctttaa aatatacttt tgccaatgca aaaaagataa attcacgctc
      361 ttgcttatcc ttactttttt caagggcgat aagataaatt tgcgtggctt tttcaaattc
      421 accacttttg gtaaaaattt cggccaaaaa actcaaattt ccaaaactca aaccctcatt
      481 tcttaacaaa tctttgtgga tattatccat ctcaaatttc ttaataaatt tttcaagctt
      541 ttgttcttca tctttgctcg caaatacttt ccaaatataa tttgccacag ctacaacgaa
      601 gattaaaaca gttaaaatta taagtcccac taagggatct ctgtattcta cgaagaaaaa
      661 atccatcatc ctgctctaaa aattttatgc caaattatag ctaaatcttt gtataatttt
      721 atttaaggtt ttaaaatgat aactaaagaa agtatagaaa atttatccca aagacttaat
      781 attgttgata ttattgaaaa ttatatagaa gtaaaaaaac aaggttcaag ctttgtttgc
      841 gtgtgtcctt ttcacgcgga taaaaatcct tctatgcata taaatcccac aaaaggattt
      901 tatcattgtt ttgcgtgtaa agcaggcgga gatgctttta aatttgtaat ggattacgaa
      961 aaattaagct ttactgatgc ggttgaaaaa attgcaaatc tttgtaattt tactctaagt
     1021 tacaccaaag aaaaaaatga aaataaaaaa gaattaagaa ctatactgcc tagcttaaat
     1081 gcttatttta aatccaatct caaacaccat aaagaagctt tggattatct gtataaaaga
     1141 acgctaaatg atcaagatat agccaaattt gaattaggtt ttgcaggctc aagcgaagac
     1201 agcataagat tgtttcataa cgaaaaaatc cctttagaag atgctatgag tgtgggtgct
     1261 ttaaaaaagg atgaaaataa tgaattttat gcaagtttta tatggcgtat cacttttcca
     1321 atttatgatc ataaagactt attggtaggt tttgggggac gcactttaaa tcctaatgtt
     1381 gcagcaaaat atgtgaattc tcctcaaaat atattatttg ataaaagtag aattttttat
     1441 gcttttaata tagctaaaga aaatatagcc aaaaaaaaag aaatgatagt atgtgaaggc
     1501 tatatggatg ctatagcttt tcataaagca ggttttaaca atgctgtagc agtgcttgga
     1561 acagcattaa ctgaaaatca tctgccttta atccgccgtt atgaagctaa agtgatttta
     1621 tgttttgata atgatgaagc gggattaaat gcggccactc gttcagcctt tttacttagt
     1681 actcataaaa tagatggtaa agtagccctt ttagaaggcg gaaaagatcc tgccgaactt
     1741 gttgctaata atcaaagtgc gaaacttcac accctacttg aaaaagggat ggatttaggg
     1801 gagttttaca ttagacgcat actttcaagc ttttctttaa attccgccct agataaacaa
     1861 aaagctcttg aaaatataca aaaatacacc tttagccttg aacccttagt agctagttct
     1921 tatgtaggtt tggtttcaaa acttttagga gtagatgaaa aactcatcgt tcttacttca
     1981 aatcgaaaac caagtaaaac tatcaatttt aacacctctt tccaacaaac gcaaaatcat
     2041 aatcctaaat cccacatcac cgagcttgaa ctcttaaatt atttaaaaaa caatcctaac
     2101 atgcacgagc tttttataaa aattagcgat attagatgtt ttaaacataa agtattatta
     2161 gaaaaaattt tagaacacaa aagctatgaa gatagtgata taagagaatt tgagagtaaa
     2221 aattttagta aagatttaag tcaaattgag tttttatgg
//
LOCUS       DAQUWA010000133         2148 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.133, whole genome shotgun sequence.
ACCESSION   DAQUWA010000133 DAQUWA010000000
VERSION     DAQUWA010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.133"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..831
                     /locus_tag="R8X70_001885"
     CDS             <1..831
                     /locus_tag="R8X70_001885"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEF2929630.1"
                     /translation="DPYILGIKNKFIRRFVAWIITKSRVKAMRENYKQMGGKSPLNEL
                     TQSLCEKLNAKTKDFKFDFVNLYVPPFANEVLQKYTLSENDEIILFPLYPHHSSTTVT
                     SSLEVLQNEILKQKIKAKIKIVDIFYEDELYNETIVSHILTKKSEFDAKTLIFSAHSL
                     PQSIIDKGDLYEKHVNHHVELLKERLKDHFDEIILAYQSKLGPVKWLEPNTSDILANL
                     DNKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLITCPNDSDEFIHFILKYLSDFN
                     "
     gene            complement(891..2126)
                     /locus_tag="R8X70_001886"
     CDS             complement(891..2126)
                     /locus_tag="R8X70_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEF2929631.1"
                     /translation="MNAINSSFIVLCTLLVLLMTPALAMFYSGMVRSKNTLNTIMNCF
                     IVFGVITLQWVVLGFSLSFGKDEGLGLVGNFENFLLEGISGYNASGVPNILFVIFQMM
                     FALIASAIITGSLVGRIKLGVLVIFLLFWSTLVYDVLAHMIWSSEGFLLKRGSLDFAG
                     GGVVHISSGVAGLVGALMVGARKSDDEDKNAHSIPYAFLGAILLFIGWLGFNAGSAGE
                     MNDIAINAFIVSIISAACGFLSWVVLEWLIHKKPTILGGLSGLVAGLVGITPACGYVD
                     IYASLVIGTLSSVFCYFGLSFIKYKLKWDDSLDAFSLHGIGGIWGGIATGLFASAKVN
                     PNVIAQNALGEGFFISGSLELLKEQIFAIVICVVLSALISFVIFKIISCFTDLRVKEE
                     VEQKGLDVSLHGEKAYTLA"
BASE COUNT          804 a          426 c          292 g          626 t
ORIGIN      
        1 gatccttata ttttgggtat taaaaataaa tttataagaa gatttgtggc gtggattatt
       61 acgaaatctc gcgtaaaagc tatgagagaa aattataaac aaatgggtgg aaaatctcca
      121 ctcaatgaac ttactcaaag tttgtgcgaa aagcttaatg caaaaacaaa agactttaaa
      181 tttgattttg tcaatcttta tgtgccgcct tttgccaatg aagttttgca aaaatacact
      241 ttaagtgaaa atgatgaaat cattcttttt ccactttatc cacaccactc aagcaccaca
      301 gttacttcat cgcttgaagt tttgcaaaat gaaattttaa aacaaaaaat caaggcaaaa
      361 ataaagattg tagatatttt ttacgaagat gagctttata atgagacgat tgtttctcat
      421 attttgacca aaaaaagtga gtttgatgct aaaactttaa ttttttcagc acattcttta
      481 ccgcaaagta ttatcgacaa gggcgattta tatgaaaaac atgtcaatca tcatgtagag
      541 cttttaaaag aaagattaaa agatcatttt gatgaaatta tcttagctta tcaatcaaaa
      601 ttaggtccag taaaatggct tgagccaaat acgagcgata ttttggcaaa tttagataac
      661 aaagctttga tttatcctat ttctttttgc atagattgtt ctgaaacgat ttttgagcta
      721 ggtatggagt ataaacattt agcaaagtgc gattatgatt taatcacttg cccaaatgat
      781 agtgatgaat ttatccactt tattttaaag tatttatctg attttaatta agaatgattt
      841 tgaagtcctt gtttatgatt acaaggactt tttagtaaaa atttagccaa ctaagctaaa
      901 gtataagctt tttctccgtg caaactcaca tctaagcctt tttgctctac ttcttctttt
      961 actcttaagt ctgtaaaaca agagataatc ttaaaaataa caaagcttat aagagctgac
     1021 aaaaccacac aaatcacaat agcaaaaatt tgctctttta aaagttccaa acttccgctg
     1081 ataaaaaatc cctcgccaag tgcattttgg gcaatcacat taggatttac tttagcactt
     1141 gcaaaaagcc ctgtggcaat tcctccccaa atacctccga ttccatgtaa agaaaaggca
     1201 tctaaagaat catcccattt gagtttgtat ttgataaaac ttaaaccaaa ataacaaaac
     1261 acagaagaca aagtccctat aacaagagaa gcataaatat ctacataacc gcaagctgga
     1321 gtaattccca caagccctgc tacaagccca ctaagtccac ctaaaatagt cggtttttta
     1381 tggatgagcc actcaagtac cacccaagat aaaaagccac aagctgctga tataatactt
     1441 actataaaag cattgatagc aatatcattc atttcgccag cacttccagc attaaaacct
     1501 aaccatccta taaaaagcaa aatcgcaccc aagaaagcat aaggaataga atgcgcgttt
     1561 ttatcctcat catcactttt tctagcgcct accatcaaag ctcctacaag tccggcaacc
     1621 ccagagctga tatgcacaac accgccccca gcaaaatcaa ggcttcctct tttaagcaaa
     1681 aacccctcac tactccaaat catatgcgct aacacatcat aaactaaagt actccaaaaa
     1741 agtaaaaata tcaccaaaac acccagttta attcttccaa ccaaagagcc tgttatgatg
     1801 gcagatgcaa taagtgcaaa catcatttga aaaattacaa aaagaatatt tggaacacct
     1861 gaagcattat atccgctaat accctctaag aggaaattct cgaaatttcc tacaagccca
     1921 agtccttcat ctttaccaaa agaaagacta aatccaagca ctacccattg taaagtaata
     1981 acaccaaaaa caataaagca attcattatg gtattaagag tatttttact tcttaccata
     2041 cctgaataaa acattgccaa agctggagtc ataagcaaaa ctagcaaagt acacaacaca
     2101 ataaaacttg aatttatcgc attcatttac ctgtcctttc ttacaaaa
//
LOCUS       DAQUWA010000134         2119 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.134, whole genome shotgun sequence.
ACCESSION   DAQUWA010000134 DAQUWA010000000
VERSION     DAQUWA010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.134"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(30..2021)
                     /locus_tag="R8X70_001887"
     CDS             complement(30..2021)
                     /locus_tag="R8X70_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEF2929632.1"
                     /translation="MQKTYSLPELTLRGLLLGSILTIIFTASNVYLGLKVGLTFSSSI
                     PAVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQT
                     FMICLCGGGLGVLFTIPLRRAMVVESKLAYPEGRAAAEILKVANKDQSSKKGKQGIKE
                     IALGSFIAAIFSLLSNGFKLAASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAGA
                     IALFVGMFLAWGIFTPYLSNFEFDSAKNAVDLASSVWSSKVRLIGTGAIAIAALWTLI
                     ELLKPVIEGIKEIVKNVKITNQEKNERTNIDLSLKSIFILFVLMVVGLFITFYSFVED
                     ANLSIYYQMLFSFVGTLVSVLIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSIV
                     FLVLGVELFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWKQQV
                     ALLIGCVFGALAIVPVLNLLYQAYGFVGAMPREGMDASSALAAPQANLMSTIAQGIFN
                     HNIEWSYIAFGVVVGIFIIIIDKILRKNGNLSLPPLAVGIGIYLPPSVNIPLVIGGIL
                     KYFVMRYLANKYQNNSHKNEKIATHEQKGTLFASGLIVGESIFGVIIAAITVFSVSMG
                     GSESPLKLSFLNIHNNELLGLIFFIGVILYFIKRIVKIH"
BASE COUNT          813 a          402 c          270 g          634 t
ORIGIN      
        1 aaaattcttc tttatgaatg ttttaaattc taatgaattt taacaatacg cttgataaaa
       61 taaagtatga ctcctatgaa aaatatcaaa cctaataatt cattattgtg tatatttaaa
      121 aagcttaatt tcaaaggact ttcacttccg cccatgctaa cagaaaaaac agtaattgca
      181 gctataataa cgccaaaaat actttcccct acgatgagtc ctgaggcaaa taaagtccct
      241 ttttgttcat gggttgctat tttttcattt ttgtgagaat tattttgata tttgtttgct
      301 aaatatctca tcacaaaata ttttaaaatt ccaccaatta ccaaagggat atttacagat
      361 ggtggcaaat aaataccaat acccacagcc aaaggtggta aggataaatt gccatttttt
      421 cttagtatct tatctataat aatgataaat atacctacaa ctactccaaa tgctatataa
      481 ctccactcta tattgtgatt aaaaattcct tgtgctatag tgctcattaa atttgcttgc
      541 ggtgctgcta aagctgatga agcatccata ccttctcttg gcattgctcc gacaaaacca
      601 taagcttgat aaagcaaatt taaaacagga actatagcca aagcaccaaa aacacaacct
      661 attagcaaag caacttgttg tttccaagga gtagctccga ctaaatgtcc tgtctttaaa
      721 tcttgtaaat tatcattcga aatagcagct gtagctaaaa taacactagt agtaaaaata
      781 gctaatgcta ctgcaaattt agaaagcata ggatcttgaa aaagttccac acctaaaacc
      841 aaaaaaacaa tagaagaaat aataacacca ataagtccga ttccagaaat aggactagaa
      901 gaagatccta caagtcctgc catatatccg caagctgctg caacaaaaaa acctattaaa
      961 acagaaacta aagttccaac aaatgaaaat agcatttgat aataaatact taagttagca
     1021 tcttcaacaa aactataaaa agtaataaat aaacccacaa ccattaaaac aaaaagtata
     1081 aaaatacttt ttaaagaaag gtctatattt gttctttcat ttttttcttg attagtaatt
     1141 ttaacatttt taacaatttc tttaatacct tcaataacgg gttttaaaag ttctattaaa
     1201 gtccaaagcg ctgctatagc aatagctcct gttcctataa gccttacttt agaactccat
     1261 acactagaag ctaaatctac ggcatttttt gcactatcga attcaaaatt tgaaagatag
     1321 ggagtaaaaa tgccccaagc taaaaacata cctacaaaaa gagctatagc acctgctaaa
     1381 ccaactaaat aacctgcccc taaaagtgcc aaagaatatc ccatagaaaa accaaaagcc
     1441 attttattcc aaataaaagc aaaattactc tcacttgcag cgagcttgaa accattgctt
     1501 aacaaactaa aaatagcagc tataaaagag cctaatgcta tttctttaat gccttgtttt
     1561 ccttttttac tactctgatc tttattggct acttttaaaa tttcagctgc agctctacct
     1621 tcaggataag caagcttgct ttcaaccacc atagcccttc ttaatggtat agtaaaaagc
     1681 actccaagtc cgccaccaca aagacatatc ataaaagttt gccaaagtgg aaattcactc
     1741 caatacccac acataaaaag ccctgggata acaaaaataa ctgatgataa agttcctgct
     1801 gctgaagctt gagtttgaac catattattt tctaaaatat ttgaagtctt aaaaagactc
     1861 aaaaccgcca tggagatgac cacagctgga attgatgatg aaaaagtaag tcctacttta
     1921 agtcctaaat atacatttga agctgtaaaa ataatagtta aaatacttcc caaaagcaaa
     1981 ccgcgcaagg tgagttcggg taaagagtat gttttttgca tattccctcc aatcatttca
     2041 tcataaattc ctatgatgat aaattttaaa aataatacaa aaaaactctt atatttttat
     2101 aaatttttaa aatttgcaa
//
LOCUS       DAQUWA010000135         2077 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.135, whole genome shotgun sequence.
ACCESSION   DAQUWA010000135 DAQUWA010000000
VERSION     DAQUWA010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.135"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            275..>2077
                     /locus_tag="R8X70_001888"
     CDS             275..>2077
                     /locus_tag="R8X70_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEF2929633.1"
                     /translation="MSANETTFEIILEKLKKANLNTRSKGSMFEKLSKHLLKEKDTAN
                     IYKNIYLWDEWDKKNGQDCGIDLIIQTKDDDYIAVQCKFYESSKVDLKDLSTYFTKLQ
                     SGVGEIKFSKGIIISTSDLTQNAKKEIEQISKNIPIELITLEDFLNSNISWDKFDPNN
                     SLELPIIAKKKPREHQIQAINNTKEYFANKNNTRGKLIMACGTGKTFTSLKIIEEITP
                     KNSIVLFLAPSIALVGQTFREYCKEKTDDFVASIVCSDSKSGKSVEDDIDILELPIPA
                     STDTQSIKKAYDIAKKDNKRFIIFSTYQSVEKIMQAQKQNDLDEIDLIICDEAHRSVG
                     NLYSGKEKDKLNTFTLCHSNENINAKKRIYMSATPKIYSSSQKSKALENDNEVFSMDD
                     EEIFGNEIYSINFREAVEKDLLTDYKVIILAIKQEGIANIANTAIAKLKDEKNVDEKY
                     VDIDFVSKIIGTHKGLARNDLVALDENNQIDNDFLEEMDSNLSRRVINFCKSIRDSKN
                     ISNSFKIIMQCYDEALKKDSFKNLNISIDHVDGTMNSNVRLNKLNNLNSPKENTCNIL
                     SNARCLSEGVDVPALDSVVFFDGRNSMVDIIQSVG"
BASE COUNT          880 a          235 c          311 g          651 t
ORIGIN      
        1 aaaatatttt gaaatactat taagaataaa ataagttatt atgaagttct ttgaatttaa
       61 ttataataat tatggcttcg aagaaaacta aagtataaac actataaaag aagatattcc
      121 ctataagaaa atactactga ttttataagc tttctggtag gtataatatc tatttataat
      181 tatataaaat taaaacataa aatttttatg catttataag ctataaagtc tatttttgat
      241 atatttatga tgtattttta aataaaggtt ttctatgagt gcaaacgaaa ctacttttga
      301 aatcatctta gaaaaattaa aaaaagcaaa tttaaacact agatcgaagg gatctatgtt
      361 tgaaaaactt tcaaaacatc ttttaaaaga aaaagataca gcaaatattt ataaaaatat
      421 ttatctttgg gatgaatggg ataaaaaaaa tgggcaagat tgtggtatag atttaatcat
      481 tcaaacaaaa gatgatgatt atattgcagt acaatgtaaa ttttatgaaa gctcaaaagt
      541 agatttaaaa gatttaagca cttattttac taaattacaa agtggagtag gggagattaa
      601 atttagcaaa ggtattatca taagcactag cgatcttact caaaacgcta aaaaagagat
      661 agaacaaatt tcaaaaaata tacctataga attaatcaca ctagaagatt ttttaaattc
      721 aaacatcagt tgggataaat ttgatccaaa caattcttta gaattgccaa ttattgcaaa
      781 gaaaaaacca agagaacatc aaatacaagc cataaataac accaaagaat attttgcaaa
      841 caaaaacaac acaagaggca agctcatcat ggcatgcggt acaggtaaaa cttttacctc
      901 attaaaaatt atagaagaaa ttactcctaa aaattctatt gttttatttt tagctcctag
      961 tatagcttta gtagggcaaa catttagaga atattgtaaa gaaaagacag atgattttgt
     1021 tgcttctatt gtgtgttcag atagtaaatc aggtaaaagc gttgaagatg atatagatat
     1081 tttagaattg cctattcctg cttctactga tactcaaagc attaaaaagg cttatgatat
     1141 agctaaaaaa gacaacaaaa gatttatcat cttttctact tatcaaagtg ttgaaaaaat
     1201 catgcaagct caaaaacaaa acgatctaga tgaaattgat ctaatcattt gcgatgaagc
     1261 tcacagaagc gtaggaaatc tgtattcagg taaagaaaaa gataaattaa atacctttac
     1321 tctatgccat agcaatgaaa atatcaatgc taaaaaaaga atttatatga gtgctactcc
     1381 aaagatttat tctagttctc aaaaaagcaa agctttagaa aatgataatg aagtattttc
     1441 catggatgat gaagaaattt ttggaaatga aatttatagt attaatttta gagaagcagt
     1501 tgaaaaagac ttgcttactg attataaagt tatcatttta gccatcaaac aagaaggcat
     1561 tgcaaatata gcaaatacag ccatagcaaa attaaaagat gagaaaaatg tagatgaaaa
     1621 atatgtagat attgattttg tatctaaaat cataggtacg cataaaggtt tagcaagaaa
     1681 tgatttagtt gctcttgatg aaaataacca aatagataat gactttttag aagaaatgga
     1741 tagtaatctt tcaagaagag taataaattt ttgtaaaagc ataagagatt caaaaaatat
     1801 aagcaattct tttaaaatca ttatgcaatg ttatgatgaa gcattgaaaa aagattcttt
     1861 taaaaatctt aatataagca tagatcatgt tgatggaact atgaactcca atgtaagatt
     1921 aaataaatta aacaatctta actctccaaa agaaaatact tgtaatatat taagcaatgc
     1981 aagatgctta agcgaaggtg tggatgtgcc tgctttagat agtgtagtat tttttgatgg
     2041 aagaaattct atggtggata taatccaatc agtaggt
//
LOCUS       DAQUWA010000136         2034 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.136, whole genome shotgun sequence.
ACCESSION   DAQUWA010000136 DAQUWA010000000
VERSION     DAQUWA010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.136"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..650
                     /locus_tag="R8X70_001889"
     CDS             <1..650
                     /locus_tag="R8X70_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929634.1"
                     /translation="QNATDTKNAILREFELPRLNLYSFDTGFGIKEFTMITEPQLYFI
                     LMRSDKPNAKHFRHWVTKEVLPSIRKKGYYSINKDFHPDYDIVKKQNDILNEMVCTQN
                     NTIYNLKEAIKVLNTSVQTLKEVNKFKSNENVKKEYGTNNNPSELYSDLRKLVNTLAS
                     KANGNHRNIWKDVYFELANNFNIKKRIQADDIKKDKAYLLYLIDYLKRKIECEVI"
     gene            663..1229
                     /locus_tag="R8X70_001890"
     CDS             663..1229
                     /locus_tag="R8X70_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HEF2929635.1"
                     /translation="MNNVVFINNQEVVFENKDEQVFCTSLDVAKVFGKEHKNILRDIK
                     NILNDLREIGDVQCKSNFELSFKVRKIQGFKGRERKYPYYNLTRDGFSLLAMSFTGKK
                     ALQWKMLFINAFNEMENIIRSNNQTTNYSDYEFIKKQNEILNQITCTQSSTIYVLQDS
                     IRFLNNTISSMKEINKELKKIAGIDRFL"
     gene            1247..>2034
                     /locus_tag="R8X70_001891"
     CDS             1247..>2034
                     /locus_tag="R8X70_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929636.1"
                     /translation="MENGSGNIGNKGDINSYGSGRFAHPNLDFGELKERQGGSGRHIF
                     HALSEIQRYHVIEDRSEEIPKEYFTIEQILDYLKIGFKSGMFESFIFTGLLCFLQVIY
                     PSYKYYFLDSPLSKNEELFFDLLSYTPILVSTLFMAYISKYYKGLLTRRAIFALMNGR
                     SFSFLLKGFAIFWLFSWLKEISINNPRTVYSWADWTLWLIQYFKPNVSTEQLYVFYYK
                     YAIPALHDASYELLYSMCIFAILPYLTIFYKGYKERVKRFENKDA"
BASE COUNT          773 a          250 c          329 g          682 t
ORIGIN      
        1 tacaaaatgc tacagataca aaaaatgcta ttttaaggga atttgagcta cctagattaa
       61 atctatatag ctttgataca ggttttggta taaaagaatt cactatgatt actgagccac
      121 aactttattt tatcttaatg agaagcgaca agccaaatgc aaaacatttt agacattggg
      181 taacaaaaga agttttgcct agtattagaa aaaaaggtta ttatagcatt aataaagatt
      241 ttcaccctga ttatgatatt gttaaaaaac agaacgacat attaaatgag atggtttgta
      301 ctcaaaacaa tacaatctat aatttaaaag aagctataaa agtattaaac acttctgttc
      361 aaactttaaa agaagttaac aaattcaaat caaatgaaaa tgtcaaaaaa gagtatggca
      421 caaataataa tccctctgaa ctttactcag atcttagaaa gctagttaat actttagcat
      481 ctaaagctaa tggtaatcat agaaatattt ggaaagatgt ttattttgag cttgccaata
      541 attttaatat caagaaaaga attcaggctg atgatataaa aaaagataaa gcttatttat
      601 tgtacctgat tgactattta aaaagaaaaa tagaatgcga agttatttaa aaaggagaaa
      661 aaatgaacaa tgtagtattt atcaataatc aagaagttgt ttttgaaaac aaagatgaac
      721 aagttttttg cacaagtttg gatgtggcta aggtttttgg taaagagcat aaaaatattt
      781 taagagatat taaaaacatt ttaaatgatt tgcgagaaat aggggatgtg caatgtaaat
      841 ccaattttga gctttcattc aaagtccgta aaatacaagg ttttaaaggt agagaaagaa
      901 aatatccata ttacaaccta actcgcgatg gattctctct tttagctatg agctttacag
      961 gcaaaaaagc attacaatgg aaaatgcttt ttatcaatgc ttttaatgaa atggaaaaca
     1021 ttattagaag caataatcaa accactaatt attctgatta tgaatttatc aaaaaacaaa
     1081 acgaaatttt aaatcaaata acttgcactc aaagcagtac aatttatgtt ttgcaagata
     1141 gcattagatt tttaaacaat accattagtt caatgaaaga aattaacaaa gaactgaaaa
     1201 aaattgcagg tattgataga tttttatgag atagtaggag aatataatgg agaatggtag
     1261 cggtaatata ggcaataaag gcgatataaa ttcttatggt tcaggtagat ttgcgcatcc
     1321 taatttagat tttggggaat taaaggagag acagggcgga agcggtagac atatttttca
     1381 tgctttaagc gaaattcaaa gatatcatgt tatcgaagat cgcagtgaag aaattccaaa
     1441 agaatatttt accattgaac aaatcttaga ctatttgaaa ataggcttta aaagcggtat
     1501 gtttgaaagc tttattttta cagggctttt atgtttttta caagttattt atccaagtta
     1561 caaatattat tttttagatt ctcctttaag taaaaatgaa gaactatttt ttgatttatt
     1621 gtcttacact cctattttag tttctacttt gtttatggct tatatctcga agtactataa
     1681 aggattgctt actcgcaggg ctatttttgc cttaatgaat ggcagaagtt tttcattttt
     1741 gcttaaaggt tttgctatat tttggttatt ttcatggcta aaagaaatat caattaataa
     1801 tccacgcact gtatattctt gggcggattg gacactatgg ttgatacaat atttcaaacc
     1861 taatgtcagc actgaacaac tttatgtgtt ttactataaa tatgccattc ctgctttgca
     1921 tgatgctagt tatgaattgc tttattctat gtgtatcttt gccatattgc cttatttaac
     1981 aattttttac aaaggctaca aagaaagagt taagcgattt gaaaataaag atgc
//
LOCUS       DAQUWA010000137         2023 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.137, whole genome shotgun sequence.
ACCESSION   DAQUWA010000137 DAQUWA010000000
VERSION     DAQUWA010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.137"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            206..463
                     /locus_tag="R8X70_001892"
                     /pseudo
     CDS             206..463
                     /locus_tag="R8X70_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784754.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            476..727
                     /locus_tag="R8X70_001893"
     CDS             476..727
                     /locus_tag="R8X70_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929637.1"
                     /translation="MLNRASEHYGFFGLNRGGITYKEAKISCAPIPVLNEFHHAMSHL
                     CEVFLKDDARYTNLERAIPHFKRGMMDIYIKQSSEIFLY"
     gene            complement(1055..>2023)
                     /locus_tag="R8X70_001894"
     CDS             complement(1055..>2023)
                     /locus_tag="R8X70_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEF2929638.1"
                     /translation="QKGLQSLIEQTYIVENEYKILNENYNSLRAMVDEIIEVLPSALW
                     ILDKEKNIILQNQEALKKPKLLDIISLEKNRDELEFENRFYAVKIIAHNEKTIVSATD
                     ISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFSRSELKNKHIVLEIQKAIA
                     RVERIVNSTLLFTKGVHINANEFNLLELTEECESAINSYNYSSQIDFEIKFLDMKIYG
                     DKALLSLVLQNLIYNAIDAIEESECENPKIKIQASCDEQNLYIRVYDNGCEIKDENLV
                     FEAFRTTKLKGNGLGLSLSKEIINAHKGELKFEIQPKNFYFVLPLH"
BASE COUNT          758 a          313 c          280 g          672 t
ORIGIN      
        1 ggaagcaaaa ggaatagcga tatttcctgc aaatgttgca tttaataaaa aaacaaatgc
       61 tttttttact gaattggaag atcagttttt aaaaggagaa gtcggcaaaa gtagcataaa
      121 attagacttc gaatactata ttttatattc ttaattttta caaatagata gagaatcctt
      181 aatttctgga agaaactatg aacttgtgtt ttgcttttta ctttattata gagctttatt
      241 aaataaaaac aatactcaaa aaatcgtagc aaaaataatc aatgctatac gctgtcaaga
      301 aagattacca gagaaaatac attataaaga aaaaataatt tgcatggata atcaccatag
      361 agatctttct caaatattaa gctcgtgtgt tgtggaattt tataattcaa ttgatctata
      421 caataccttc agaaaaaata taggatttga aaatagaaaa aaaatagcga tagaaatgct
      481 aaatcgcgca tcagagcact atggtttttt tggattaaat agaggaggaa taacatataa
      541 agaagcaaaa atctcttgcg cccccatacc agttttaaat gaatttcatc atgccatgtc
      601 gcatttatgc gaagtatttt taaaagatga tgcacgatat accaatctag aaagagcaat
      661 ccctcacttt aaacgcggaa tgatggatat atatataaaa caatcatcag agattttctt
      721 atattaaacc aagatgcttt aggggtcaaa caagaagctc taaaaataag agaattagaa
      781 tatcaaacca taggaaaacc caaaaaagta acaaaaaatc ctaccttaaa cctaatcagc
      841 aaaaaagaag aaaaagttat cccaggatat aaagaattat gtgaaagaat tgtcagacaa
      901 agtaaaaata caaactaaaa gcgatatgaa ttaagcttta gtatgcagtt ttggcttatt
      961 gacttgctat tttgtatact taaagctatc tttgatattt aatttcaaat tttaacaatt
     1021 aaaaaattaa aaattttata agatttaatt attatcaatg caaaggtaaa acaaaataaa
     1081 aatttttagg ctgaatttca aattttaact cccctttgtg agcgttaatg atttctttag
     1141 aaagcgataa gcccaaccca tttcctttga gtttagtagt tctaaaagct tcaaagacca
     1201 aattttcatc tttgatttcg caaccattat cataaactct aatgtataaa ttttgctcat
     1261 cacagcttgc ttgaattttg attttaggat tttcacactc gctttcttca atcgcatcta
     1321 tggcattata aattaaattt tgcaaaacca aagacaaaag tgctttatct ccataaattt
     1381 tcatatctaa aaacttaatt tcaaaatcaa tttgagatga gtagttgtaa gaatttatgg
     1441 cactttcgca ctcttctgtt aattctaaaa gattaaactc atttgcattg atgtgcacac
     1501 ctttagtaaa aagtaaagta gaatttacga tacgctctac cctagcaata gccttttgaa
     1561 tttcaagtac gatatgtttg tttttaagtt cgctacgaga aaaaagtgta gaagcaagca
     1621 aggatataga tcctatagga tttcttatct catgtgctaa atgcgccgcc acacttccca
     1681 tactagcaag tctttcatta cgcttttcat cgctaatatc cgtagctgaa actatggttt
     1741 tttcattatg agcgataatt ttaaccgcat aaaatctatt ctcaaattca agctcatcac
     1801 gatttttttc aagactgata atatcaagca atttaggttt tttcaaggct tcttgatttt
     1861 gcaaaataat atttttttct ttatctaaaa tccaaagcgc actaggcaaa acctcgataa
     1921 tctcatctac catagcacgc aaagaattgt aattttcatt taaaatttta tattcatttt
     1981 ctacgatata agtttgctct ataaggcttt gtaagccttt ttg
//
LOCUS       DAQUWA010000138         1905 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.138, whole genome shotgun sequence.
ACCESSION   DAQUWA010000138 DAQUWA010000000
VERSION     DAQUWA010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.138"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(49..840)
                     /gene="flgG"
                     /locus_tag="R8X70_001895"
     CDS             complement(49..840)
                     /gene="flgG"
                     /locus_tag="R8X70_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HEF2929639.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKGRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGIGVRPTAVTKVFTEGNLKATSTDSLDMAIAGNG
                     FFQIQLPDGTIAYTRNGQFTKDNEGNIVNADGYRLLPEMTIPEGATAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIATQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
     gene            complement(871..1683)
                     /locus_tag="R8X70_001896"
     CDS             complement(871..1683)
                     /locus_tag="R8X70_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HEF2929640.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDASRFVNTTIDGVPQVSQGYTDFSLGSLKTTNNPLDLAIT
                     REDAFYLVQTKDGEIRLSKDGNFQLNEEGYLVNKQGYRILSSDYFNNPQNAGIRLPNG
                     AVYINVDKNGSIEVDGVQNARLFIAQVDDIRALQKDGDNVYRIDDLTRIRDLDNSNAV
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
BASE COUNT          581 a          376 c          270 g          678 t
ORIGIN      
        1 aaaaatttat ggcataaaaa taccataaat ttatataatt aatttaaatt atctttttaa
       61 ttgattgaca attccaagca tatcatcact cgtcgtgata gcttttgaac ctgcttcgta
      121 agctctttgt cctgtgataa gatctgtcat ctcttcaaca agctgcacgt tgcttaactc
      181 tataaagcca tgtcttattg ttccaagtcc atcttgggtt gctatacctg ctacaggtgc
      241 accgcttgcc cctgtttcaa gataaagatt atctcccata gaatgaagtc cagctgggtt
      301 gataaattgt acaagctcaa cttgaccgat ttgtgtttct tgttgttctc ctggaagcat
      361 tacagaaact gtgccatcag tagccacatt aatcgcagtt gcaccctctg gtatagtcat
      421 ttcaggtaaa agtctataac catctgcatt aacgatattt ccctcattat cttttgtaaa
      481 ttgtccattt cttgtataag ctatcgtgcc atcaggaagt tgaatttgaa aaaaaccatt
      541 tcccgcaatt gccatatcaa gactatctgt gcttgtagcc tttaaattac cttcagtaaa
      601 aacctttgtc actgctgttg gacgcacacc aatacccact tctatgcccg atggagaaag
      661 tgttgtggct gaagttgaag ttcctgcgta tttcataact tgatacatta gatcagcaaa
      721 ttcagcacga ccctttttaa aacctgctgt gttaacattt gcaatattgt ttgaagtaac
      781 atcaatttgt gtttgctgcg ctaccattcc cgtagcagca gtatgaagtg atctcatcat
      841 tttttatcct ttaatttatt ttatattatt ttatttaacg gctgcaagtt tattgatagc
      901 ttcttggttt aagtcatcca tatgagctgt cataactttt tgatacattt ctaccattct
      961 atttgcctct ataagtccta ccatttcggt tactggattg acattagagc cttgagaaaa
     1021 accttgacgc actgcattag aattatccaa atctctaata cgcgttaaat catctatcct
     1081 ataaacatta tccccatctt tttgcaaagc tcttatatca tctacttgag cgataaataa
     1141 tctcgcattt tgaacgccat ctacctcaat acttccgttt ttatctacat tgatataaac
     1201 cgcaccatta ggaagacgaa ttcctgcatt ttgaggatta ttaaaataat cactgcttaa
     1261 aattctatat ccttgtttat tgactaaata tccctcttcg ttaagttgaa aatttccatc
     1321 tttacttaat cttatttcac catcctttgt ttgaactaaa taaaaagcat cctctctagt
     1381 aatggccaaa tccaaagggt tattagtcgt ttttaaagaa cctaaactaa aatctgtata
     1441 tccttgagaa acttgaggaa cgccatctat ggtagtattg acaaatcttg atgcatctct
     1501 tgtgtgattt tctataggca actcatcctg agtttcttta aaaatccttt taaaatctgc
     1561 aattactaca tcatctcttt tgtaaccact cgtgttaata ttggcaagat tgtttgtaat
     1621 aacatcaagt ttattaaact gagttaccat cccacccgtt gcttgataat atccattttg
     1681 catatttttc acctataaat tttgatattt ttaatctata aagcaaagag tgttccaact
     1741 tttaaaaaga atgaatttta ggggattaag caagtagaaa taaaatactg aatgataatt
     1801 tgcatcatat tgtgttttta caaggaatta tactaaaaaa accaaaagta tcattaaatc
     1861 gcttaaaaag cagcaacatt catctcttta cccaagaaat aagag
//
LOCUS       DAQUWA010000139         1763 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.139, whole genome shotgun sequence.
ACCESSION   DAQUWA010000139 DAQUWA010000000
VERSION     DAQUWA010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.139"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..340
                     /locus_tag="R8X70_001897"
     CDS             <1..340
                     /locus_tag="R8X70_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEF2929641.1"
                     /translation="VRFKIMLFKFLKKLGLGRFYRYFASKDGANLNPLMYQTFKNVVD
                     EDLSQTFAKIDNKSLIFWGIDDKATPLKSGEAMHKLIKNSEFYPLEGDHFFFLKHSLF
                     IANKIKENQC"
     gene            334..1761
                     /locus_tag="R8X70_001898"
     CDS             334..1761
                     /locus_tag="R8X70_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEF2929642.1"
                     /translation="MLTNTLYFINSLFFNFCVAFYLMSALQWYSYKFKRVFFHYHRPL
                     WHLYFLFLPYFFFLTFPLYSLAYFALIHTPILYFWNKSIDKKLVFTSKVKWFFVFVFI
                     YNTLFAILALRFSFLFNLFALPFALISLKIFELFSNLYFKNKAKAKLQNNPQLKIILI
                     TASFGKTSIKNFLYELLKDDFKTYKTPRSVNTLLGIIADINTNLSDDTQIYIAEAGAR
                     VKGDIDVITRFLEPQICIVGEIGNAHLEYFKNIENTRKTKLEALNSKRLEKAFLHTST
                     QKSEDELILLYDDKLQDIQASLQGLEFKINLENKTYEFKSQILGDFNAQNLCACILCA
                     NYLGVKIEKIQKQVLKINSVEHRLQIISKEPKFIIDDGFNGNYKGMSASYKLCKNYKG
                     RKVLVSPGIVEVDKDENVKLAKIINECFDLAIITAQVNADIFKKELKIKTIILKEKAD
                     LVKVLAKETQQGDLILFSNDAPSFM"
BASE COUNT          626 a          264 c          261 g          612 t
ORIGIN      
        1 agtgcgtttt aaaatcatgc tgtttaaatt tctaaaaaaa ttgggtttgg gtagatttta
       61 tcgttatttt gcaagcaaag atggagcaaa tttaaaccct ttgatgtatc aaacttttaa
      121 aaatgtagta gatgaagatc tgagtcaaac ttttgctaaa atcgacaata aaagccttat
      181 tttttggggg attgatgata aagccacccc tttaaaaagc ggagaagcaa tgcacaagct
      241 tatcaaaaat agcgaatttt atcctttaga aggggatcat tttttctttt taaaacattc
      301 tttatttata gccaataaaa tcaaggaaaa ccaatgctaa ccaatacact ttattttatc
      361 aattctttgt tttttaattt ttgtgtagct ttttatctta tgagcgcttt acaatggtat
      421 tcttataaat ttaaacgcgt attttttcac tatcatagac ctttgtggca tttgtatttt
      481 ttatttttac cttatttttt ctttttgact tttcctttat attctttggc gtattttgca
      541 cttattcata ctccgatttt atatttttgg aataaaagca tagataaaaa actcgtcttt
      601 acaagcaagg ttaaatggtt ttttgttttt gtatttatct ataataccct ttttgccata
      661 cttgctttgc gtttttcttt tcttttcaat ctttttgccc tgccttttgc tcttataagt
      721 cttaaaatct ttgagctatt tagcaattta tattttaaaa ataaagccaa agcaaaactt
      781 caaaacaatc cacaattaaa aatcatactc attactgcaa gttttggaaa aacaagtatt
      841 aaaaatttcc tctatgagct tttaaaagat gattttaaaa cctacaaaac ccctcgctct
      901 gtaaataccc tacttggcat tatcgcagat atcaatacaa atttaagcga tgatacacaa
      961 atttacatag cagaagcagg agcaagagta aaaggcgata ttgatgttat aacgcgtttt
     1021 ttagagcctc aaatttgcat tgtaggagag ataggaaatg cgcatttaga gtattttaag
     1081 aatatagaaa atacgcgaaa aaccaaactc gaagctttaa attccaaaag attagaaaaa
     1141 gcttttttac atactagcac ccaaaaaagc gaagatgagc ttatcttgct ttacgatgat
     1201 aaattacaag acattcaagc aagtcttcaa ggtttggaat ttaagatcaa tttagaaaat
     1261 aaaacatatg aatttaaaag ccaaattcta ggagatttta atgctcaaaa tctttgcgct
     1321 tgtatacttt gtgcaaatta tctaggcgta aaaatagaaa aaattcaaaa gcaagtttta
     1381 aaaatcaatt cagtagaaca tcgcttacaa atcatctcta aagagcctaa attcattatc
     1441 gatgatggtt ttaatgggaa ttataaaggt atgagtgcaa gctataagct ttgcaaaaac
     1501 tataaagggc gcaaggtttt agttagccct ggtatagtag aagtagataa ggatgaaaat
     1561 gtaaaattag ccaaaatcat caatgaatgc tttgatcttg ccatcatcac agcacaggtt
     1621 aatgctgata tctttaaaaa agaacttaaa ataaaaacca tcatactcaa agaaaaagca
     1681 gatcttgtta aggttttagc aaaagaaacc caacaaggcg atttgatact tttttctaat
     1741 gatgcaccta gttttatgta agt
//
LOCUS       DAQUWA010000140         1763 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.140, whole genome shotgun sequence.
ACCESSION   DAQUWA010000140 DAQUWA010000000
VERSION     DAQUWA010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.140"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(343..>1763)
                     /locus_tag="R8X70_001899"
     CDS             complement(343..>1763)
                     /locus_tag="R8X70_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HEF2929643.1"
                     /translation="LSENIAFIESIDDKNDEILIKYYFNDVNHKTKILLDNDVAIVKH
                     SKIRQYDLLDKVFLYEKRIWLKLKNDTKMLDICINSQKLKLVFNDRCINDLSLVLKVL
                     AKQKNQRSKNSNLWLFADMSWRADDNAEHLYRYIMQNHPKQKTAFILSKNSTDYPRLK
                     KEGFRLVDPRSFYFKYLIYKADKIISSHIDKYIFNALGGDTLKTKDFIFLQHGVIKDD
                     LSRWLNQRKIDIFITSTKAEYNSIIGDCNQYKFSTKEVVLTGLARWDALIKNNILNTK
                     QILIMPTWREYLSGKVQKYGARARNPEFVKSLYFQKWQEFLCSKELEKLAVQYGYSIV
                     FIPHPQVRMYLEVFNLPSFIITSYKESMQKLFCESSLIITDYSSVAFDMAVLKKPVLY
                     YQFDKDEFFIKHSYAKGYFDYEKDGFGLVVKNGEKLLREFEIILQNNCKLFDTYKNNV
                     NSAFIFRNSSYCKKIYKILNKY"
BASE COUNT          638 a          278 c          171 g          676 t
ORIGIN      
        1 tcaagtacaa tccaaaattt atcttgtggt tttataatac aatccgatcg atttatattt
       61 tgataatatt cattttttaa atacaaacca aagaaatatc atcattttta taagtaaata
      121 tttacaaatt ttaattctta caaacaatac atacaattat tttaaaagca tccaaaatgt
      181 tcacatccaa ccaagcgtta ctctataata tctaacacca aagccattga aatcaaaaaa
      241 aagataataa tccgaaaatt cattaaatac tattcattat taaaaagctt tatagctttt
      301 ataccgagat agaaattaag tttttattat ataagctata ttctaatatt tatttagtat
      361 tttataaatt tttttacaat aactactatt tctaaaaata aaagctgaat ttacattatt
      421 cttataagta tcaaaaagct tgcaattatt ttggagtata atctcgaact ctctcagcaa
      481 tttttctcca tttttcacaa ctaaaccaaa accatctttt tcataatcaa aataaccttt
      541 agcgtacgaa tgttttatga aaaactcatc tttatcaaat tgataataaa gcacaggctt
      601 tttcaaaacc gccatatcaa aagcaacgct tgaataatcc gttattatta aagatgattc
      661 gcaaaataat ttctgcatac tttctttata ggaagtaatg atgaaagaag gtaaattaaa
      721 aacctctaaa tacattctta cttgtgggtg cggtataaaa acaatgctat atccatactg
      781 cactgctagt ttttctaact ctttactgca taaaaattct tgccattttt gaaaataaag
      841 tgattttaca aattcgggat ttctagccct agcaccgtat ttttgcactt tcccacttaa
      901 atactctctc caagtaggca taattaaaat ttgttttgtg tttaaaatat tatttttaat
      961 caaagcatcc catcttgcta atcctgttaa aactacttct tttgtactaa atttatattg
     1021 gttacaatca cctattatag aattatactc tgcttttgta cttgtgataa atatatctat
     1081 ttttctttga ttaagccacc tagataaatc atcctttata accccatgtt gtaaaaagat
     1141 aaaatcttta gtttttaaag tatctccgcc caaagcatta aaaatatact tgtctatatg
     1201 agaagaaata attttatcag ctttataaat cagatattta aaataaaagc ttcttggatc
     1261 aaccaatcta aaaccttctt ttttaagtct tggataatca gttgaatttt tgcttaaaat
     1321 aaaagcggtt ttttgtttgg gatgattttg catgatatat ctatatagat gctcagcatt
     1381 atcatcagcc ctccaactca tgtcggcaaa aagccataaa ttagagtttt ttgatctttg
     1441 gtttttttgc ttagctaaaa cctttaaaac taggcttaaa tcatttatac atctatcatt
     1501 aaaaacaagt tttagttttt gcgaatttat acaaatatca agcattttag tatcgttttt
     1561 aagcttaagc catattcttt tttcatataa gaaaacttta tccaataaat catattgtct
     1621 tattttagaa tgctttacaa tagccacgtc attatctaat aaaatcttag ttttatgatt
     1681 aacatcatta aaataatact ttattaaaat ttcatcattt ttatcatcaa tactttctat
     1741 aaaagctata ttttcactta aat
//
LOCUS       DAQUWA010000141         1760 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.141, whole genome shotgun sequence.
ACCESSION   DAQUWA010000141 DAQUWA010000000
VERSION     DAQUWA010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.141"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(18..779)
                     /locus_tag="R8X70_001900"
     CDS             complement(18..779)
                     /locus_tag="R8X70_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEF2929644.1"
                     /translation="MQKLVEQVWDYTKHAKFYSYRPNYAPKTIDMLISLVGKNDIKVA
                     DIGAGTGNLSIMLLERGCKVVSVEPNDAMREIGIERTKGEKIEWVRATGLNSTLQNSE
                     FDWVTFGSSFNVMDRNEALKETHRLLKSKGYFSCMWNHRDLNDPIQKIAEDTIIEFVP
                     NYTRGTRREDQRPIIESRKDLFDNIVYIEEDFYFHQSIENYINAWKSVKNPYWDLETE
                     EGNELFNKISDKISQRLPKEFSIKYTTRCWSAKKI"
     gene            complement(834..1607)
                     /locus_tag="R8X70_001901"
     CDS             complement(834..1607)
                     /locus_tag="R8X70_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEF2929645.1"
                     /translation="MKQGDFTEVAKHYHNRPAYSPFLLEKLIACINDKNKNIKNLNIV
                     EVGAGTGKLTKMLGEMFECQIDAIEPNDNMREEGRKFTQNLSNISWHQGSGEETRMKD
                     NQADWVIMASSFHWTDPKKSLPEFNRILTGGGYFTAIWNPRHIVEGSVFDEIEKEIKH
                     IIPELARVSSGTQNVKKWEEILVSTGDFVDCFFMECDYKELWDKDRYLGAWHSVNDIQ
                     AQAGKKRWKEILDMIESKISHMQSIEIPYKIRAWTARKA"
BASE COUNT          511 a          355 c          198 g          696 t
ORIGIN      
        1 cgccattttt ttccttgtta tattttttta gcactccaac aacgagtggt atattttata
       61 ctaaattctt taggaagtct ttgtgaaatt ttatcactaa ttttattaaa taattcattt
      121 ccttcttctg tctccaaatc ccaataagga tttttaacac ttttccacgc attaatataa
      181 ttttcgatac tttgatgaaa ataaaaatct tcttcaatat agacaatatt atcaaaaaga
      241 tccttgcggc tttctataat tggtctttga tcttctcttc tggttcctct agtataattt
      301 ggtacaaatt ctatgatagt atcttcagct attttttgta taggatcatt taaatctcta
      361 tgattccaca tacaagaaaa atatcccttt gattttaaca gacgatgtgt ttccttcaag
      421 gcttcatttc tatccattac attaaaacta ctaccaaaag tcacccaatc aaattcgcta
      481 ttttggagtg tcgaattcaa acctgttgct ctaacccatt ctatcttttc acctttagtt
      541 ctttctatac caatttcacg catagcatca tttggttcta cagatactac cttacatcct
      601 ctttctaaaa gcatgatact taaatttcca gttcctgcac caatatcagc tactttaata
      661 tcgttttttc cgactaaact tatcaacata tctatagtct ttggagcata atttggtcta
      721 tagctataaa atttagcatg tttggtataa tcccacactt gttctactag tttttgcatt
      781 ttgtttccct ttttctatct tcgacaagct tgataaaaaa aagggaaaat attttatgct
      841 tttctagctg tccatgccct tattttataa ggaatttcta tactctgcat atgagaaatt
      901 ttagactcaa tcatatctaa aatttctttc catctttttt tacctgcttg tgcttgtata
      961 tcatttacag aatgccaagc tccaagataa cgatctttat cccaaagctc tttataatca
     1021 cactccataa aaaagcagtc tacgaaatct cctgttgaaa caagaatttc ttcccatttt
     1081 ttaacatttt gagtaccact acttacacga gcaagctctg gaataatatg tttaatctcc
     1141 ttttcaattt catcaaaaac cgaaccctct acaatgtggc gaggattcca aatcgcagtg
     1201 aaataccccc cccctgttaa tatacgatta aattccggaa gagatttttt gggatccgtc
     1261 caatggaaag aactggccat gataacccaa tcagcttgat tgtctttcat ccgagtttct
     1321 tcaccgcttc cttggtgcca agaaatattc gacaaatttt gtgtaaattt tcgcccttct
     1381 tcacgcatat tatcatttgg ttctatggca tcgatttgac actcaaacat ttctcctagc
     1441 attttggtaa gctttcctgt gccagcaccc acttcaacaa tatttaaatt tttaatattt
     1501 ttatttttgt cattgataca agctataagc ttttcaagca aaaatggact gtaagcaggt
     1561 ctattgtgat aatgctttgc tacctctgta aaatccccct gtttcatagc atttcctttc
     1621 tctaaattaa agtataatta tatctttatt tgtttaattt atattatttt tttataattc
     1681 tatatcttta taaaaatatc ttcttttcta tacaatttta ttctttttca tctaattttt
     1741 tacatatttt ttcaaattct
//
LOCUS       DAQUWA010000142         1739 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.142, whole genome shotgun sequence.
ACCESSION   DAQUWA010000142 DAQUWA010000000
VERSION     DAQUWA010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.142"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            128..823
                     /gene="dsbI"
                     /locus_tag="R8X70_001902"
     CDS             128..823
                     /gene="dsbI"
                     /locus_tag="R8X70_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HEF2929646.1"
                     /translation="MKNLYWFVYFSKWQDMRNPWFIMSIIMISLVLIAHFLFQEYLYM
                     RPCEQCVYIRLDMLIIALGGIIALINPKNTIIKILAYTLAFYGIWLGLEHSLNLNRIH
                     EAISTENPFSGVNGCRDIPLYPFNLPLHERFPSWFKPVGQCGMDFPMVPKSAYLNAFQ
                     EFFVGKNGIYNNGWYLIPSLKFMNMATCCFIAFLCSFILLFIMFVSYVFSQRKIVFTI
                     ITISLVVALKILG"
     gene            912..1550
                     /locus_tag="R8X70_001903"
     CDS             912..1550
                     /locus_tag="R8X70_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEF2929647.1"
                     /translation="MFKKMTKILTSLSLVCTFAMADDFITLSETLPDSKNSVVEAFSY
                     KCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGEYANELNELFAFAQFKDEQNGK
                     DASYSDSLSHKLADVYFVVYFINKQDNFSSSDEFYDIGLKAMNVDKNEVLNFLSTPKA
                     KEILNEFKRANDIARTYGTPAFVVNGKYQINPSAISSMQALEDIVKKLSNMP"
BASE COUNT          578 a          230 c          267 g          664 t
ORIGIN      
        1 accctattct tttgaattta cacatcaaaa cattttacaa attttaaaat ttttaagaat
       61 gtatttatta ttaagctttt ataatgattg cttgtctgta agtattattt aaggagtaaa
      121 aaataaggtg aaaaatttat attggtttgt ttatttttct aaatggcaag atatgcgtaa
      181 tccttggttt attatgagta ttataatgat aagccttgtt ttaatagcgc attttttatt
      241 tcaagagtat ctttatatga gaccttgtga acaatgtgtt tatataaggt tagatatgtt
      301 aattatagct ttaggaggca tcattgcgct gataaatcct aaaaatacca ttattaaaat
      361 ccttgcctat actttagctt tttatggaat ttggcttgga ttagaacatt cgttgaattt
      421 aaatcgcatt catgaagcta ttagcacgga aaaccctttc agtggtgtta atggatgtcg
      481 cgatattcca ctctaccctt ttaatctgcc tttacacgaa cggtttcctt cttggtttaa
      541 acccgtagga caatgcggaa tggattttcc catggttcca aagtctgctt atttaaatgc
      601 tttccaagaa ttttttgtag gaaaaaatgg aatttataat aatggctggt atttaatccc
      661 tagtttgaaa tttatgaata tggctacttg ctgttttata gcatttttat gctcttttat
      721 tttacttttt ataatgtttg taagctatgt ttttagtcaa agaaaaattg tttttactat
      781 cattactata agcttagttg tagcgcttaa gatattgggt taaaaaatac ttattttaaa
      841 gattaaattt tttacttgtt tatccttttt aaatagaatt actttttata tcaaattaag
      901 gataaacaat catgtttaaa aaaatgacaa aaattttgac aagcttgagt cttgtttgca
      961 cttttgcgat ggcagatgat tttatcaccc tatcagaaac tttgcctgat tctaaaaatt
     1021 ctgttgtgga ggctttttcc tataagtgta tacattgtta caatcaccat aaatttggca
     1081 ccttagaaaa acttagagag gcttttccaa atttgcattt taaactctat cctgtgagcc
     1141 ttatgaatgg agaatacgca aatgaactta acgagctttt tgcctttgcc caatttaaag
     1201 atgagcaaaa tggcaaagat gctagttata gtgatagttt atcacataaa cttgccgatg
     1261 tttattttgt agtttatttt ataaacaagc aggacaattt ttcaagctcg gatgaatttt
     1321 atgatatagg cttaaaggct atgaatgtcg ataaaaatga agtattgaat tttttaagca
     1381 cccctaaagc caaagaaatt ttaaacgaat ttaaaagagc aaatgatata gctaggactt
     1441 atggcactcc tgcttttgtt gtaaatggta aatatcaaat caatcctagc gccatcagtt
     1501 caatgcaagc tttagaagat atcgtcaaaa aacttagtaa tatgccataa aataaaacaa
     1561 tgcattttct aacactagat aatgcattga aatttaatat taatttttct tttaatgcaa
     1621 aaataaagtt ctttagttat aattagttcg caatattttt aaaggttgtt tttaatgaaa
     1681 aatttaagcg ttcaagaaaa aaaagatctt gataattgtg ttttcaaaac tcttggtaa
//
LOCUS       DAQUWA010000143         1691 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.143, whole genome shotgun sequence.
ACCESSION   DAQUWA010000143 DAQUWA010000000
VERSION     DAQUWA010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.143"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            123..647
                     /locus_tag="R8X70_001904"
     CDS             123..647
                     /locus_tag="R8X70_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929648.1"
                     /translation="MKGFSIKKIFALLALTSLLTSSVFAGDFLAKVSNGALSDTSPGV
                     KELSLEEMKEVRGGAFQSVGNCLSGTNSCLSLAVSQTITGTHYRDFKAILTNEEPHST
                     NYHIGFVAQKNWSISSLGKPYSFLTYSAIIFDRASGTMYKQSSQVLNNNGIVRELSYR
                     YKNQFDRQLGGLSR"
     gene            697..1653
                     /locus_tag="R8X70_001905"
     CDS             697..1653
                     /locus_tag="R8X70_001905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929649.1"
                     /translation="MINTAYINNHHKGGYSTQKLKDISQATTQSLGISKNYKIDATQM
                     QTLVKNLSQNKHFDTIDFTKTLENAYKVFSNLMQFSKNELPLGFEMDKNSFEILKIYD
                     KAQDLENNFLNENNSYKGSKVVINLKDLNSKDKSFMNFANVVFNQFGGGYLIEGQSNI
                     SGKLMGFDKNMDKNQIQDLNDFIKNNSFIANGSMEKLMEALDLFSSNLSIEEFKQKWL
                     NLTINLEPSNKTIEQIVREDLKAKEEQKPRTPIQSESQNKETYKDDSKMNELVKKLLE
                     NKFGKSEELELLFGVKFSDDDAGEFNKILSLNSTPKSIDIKA"
BASE COUNT          685 a          213 c          277 g          516 t
ORIGIN      
        1 agcaaacaaa ccgagaataa aattttaagt atttaaagaa aattcactta actttcaaag
       61 caagattaaa cttttgctag aataagtcga tagtactttt aaagaactta caaaaagaat
      121 ttatgaaagg attttcaata aaaaagattt ttgctttatt agctttaact tctttactga
      181 ctagttctgt ttttgctggg gattttttag ctaaagttag taatggtgct ttaagtgata
      241 caagcccggg tgtaaaagaa ctcagccttg aagagatgaa agaggttagg ggaggtgcgt
      301 ttcaatctgt cggtaactgt ttaagtggga caaattcttg cttaagtctt gccgtaagtc
      361 aaactataac aggaactcat tatagagatt ttaaagctat tcttacaaac gaagagcctc
      421 atagcacaaa ttatcatata gggtttgtcg ctcaaaaaaa ttggtctata tctagtcttg
      481 gaaaacctta tagttttctt acatactctg ccatcatttt cgatagagct tctgggacaa
      541 tgtataaaca aagcagtcaa gtattaaata ataatggaat tgttagggag cttagttata
      601 gatataaaaa tcaatttgat aggcaattag gcggattatc aaggtaaaaa ccataaagcc
      661 gatttaaatt aagataaatc agcaaggagt gagagtatga taaacacagc ttatataaat
      721 aaccatcata aaggtggtta ttctactcaa aaattaaaag atatatctca agcaacaacg
      781 caaagcttgg gaatttcaaa aaattataaa attgatgcga cacaaatgca aacactagtt
      841 aaaaatcttt ctcaaaataa acatttcgac actatcgatt ttaccaaaac gctagaaaac
      901 gcctataaag tgttttctaa tttaatgcaa ttttctaaaa atgaacttcc gctaggtttt
      961 gaaatggata aaaatagttt tgaaatttta aaaatttatg acaaggcaca agatttagaa
     1021 aataattttt taaatgaaaa taattcttat aaaggaagca aagtggtcat aaatttgaaa
     1081 gatttaaact caaaggataa atcttttatg aattttgcaa atgtagtttt taatcaattt
     1141 ggtggcggtt atcttattga aggacaaagc aatataagcg gtaagttaat gggatttgat
     1201 aaaaatatgg ataaaaatca aatccaagat ttaaatgact ttataaaaaa taattctttt
     1261 atagctaacg gctcaatgga aaaacttatg gaagcactcg atttgtttag tagcaattta
     1321 agcatagaag aatttaaaca aaaatggcta aatttaacaa taaatttaga gccaagcaat
     1381 aaaaccatag agcaaattgt aagagaagat cttaaggcta aagaggagca aaaacctcgc
     1441 actcccatac aaagcgaaag tcaaaacaaa gaaacttaca aagatgatag taaaatgaat
     1501 gaacttgtaa aaaaactgct agaaaataaa tttggtaaaa gtgaagaatt ggaacttctt
     1561 tttggtgtga aatttagtga tgatgatgca ggagaattta ataaaatcct ttctttaaat
     1621 tctacaccaa aaagtataga tattaaagct taaggattta aaagtctttt aaattcctaa
     1681 tcttaataaa a
//
LOCUS       DAQUWA010000144         1611 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.144, whole genome shotgun sequence.
ACCESSION   DAQUWA010000144 DAQUWA010000000
VERSION     DAQUWA010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.144"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            241..1362
                     /locus_tag="R8X70_001906"
     CDS             241..1362
                     /locus_tag="R8X70_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HEF2929650.1"
                     /translation="MIYCDHCVMPNTRPGINFTKDKEGKNICSACINHKNKENIDYKA
                     RFKELEALCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFT
                     MTEAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGSDTEETPSAKEIFLNGVASDLDINEFIDDEIKEENL
                     QLFFNPSKDKLDKLDPIYLSYFIKWNSYSNYIFAKSRGFSDLQDEWDRSHCAENFDQV
                     DSIGYILHAWMKYPKFGHAMASDYAARFVRYGLLSRKEAIELVQKRDHKLDNKCVEDF
                     CNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNKLQ"
     gene            1380..>1611
                     /locus_tag="R8X70_001907"
     CDS             1380..>1611
                     /locus_tag="R8X70_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEF2929651.1"
                     /translation="MQNSLETYTMKYNENGYGLLFPDGHVVRFYERILKYKLNKTNGN
                     LLDFGCGNGVHSAYFQSKGFKTFGIDIVPSLKE"
BASE COUNT          641 a          184 c          273 g          513 t
ORIGIN      
        1 aaaagaaatt tgttaaatat tatcgacact ataggcatag aactttgtaa taaaatttgt
       61 aagaatttaa aagaagatga tgaaaatttt taccatccaa aaatctttaa aaaggcctta
      121 taaaaaggaa ttttaggtag aaaaataaaa caaacataag tgatatttta taaaataagc
      181 aaatattaat ttaatatttt atacaatcta atatttttat taatattgaa ggggtgggga
      241 atgatttatt gtgatcactg cgtgatgcca aatactagac ctggtattaa ttttacaaaa
      301 gataaagaag gtaaaaatat ctgttcagct tgcatcaatc ataaaaataa agaaaatatt
      361 gattataaag caagatttaa agagcttgaa gccttatgcg ataaataccg cagaatgaat
      421 ggaaaatttg aatatgattg cgctattgcc gtaagtggag gtaaagattc gcattttcaa
      481 gtgcatatca tgaaagaaaa acttggaatg aatcctattc tttttagcgt tgaagataat
      541 ttcaccatga ctgaagcagg taagaaaaat cttaaaaatt taagtgaaac ttttggttgt
      601 catattatta gcttaaagcc tgatatcaaa actcaaaaaa aagttatgct aaaaaccttt
      661 gaaaaatatg gaaaacccac ttggtttatt gatagactaa tttacagcta tccttttgct
      721 atggctttaa aatttaatac acctttattg gtttatggag aaaatgttag ttatgaatat
      781 ggaggtagtg ataccgaaga aactcctagc gccaaagaaa tatttttaaa tggtgtagct
      841 agtgatttag atataaatga atttatagac gatgaaatca aagaagaaaa tttgcaactt
      901 tttttcaatc caagcaaaga taaactcgat aaacttgatc ctatttatct gagctatttt
      961 ataaaatgga attcttactc aaattatatc tttgctaaaa gtcgtggatt tagcgatttg
     1021 caagatgagt gggatagaag tcattgtgca gaaaattttg atcaagttga tagtataggc
     1081 tatatcctac acgcttggat gaaatatccc aaatttggtc atgctatggc aagtgattat
     1141 gcggctcgtt ttgtgcgcta tgggctttta agcagaaaag aagccattga actcgtgcaa
     1201 aaaagagatc ataagcttga caataaatgt gttgaagatt tttgcaactt cataggtatt
     1261 agcaaaacca cattttggaa aatagtagaa aaacactaca atatggattt attttataaa
     1321 aatgattttg gagaatttaa attaaaaaat aaattacaat aaaaatataa aggaaagaaa
     1381 tgcaaaactc attagaaact tatacaatga aatataatga aaatggatac ggattacttt
     1441 ttccagatgg tcatgtagta cgtttttatg aaagaatttt aaaatacaaa ctaaataaaa
     1501 caaatggaaa tttacttgat tttggttgtg gcaatggtgt acattcagcg tattttcaaa
     1561 gcaaagggtt taaaaccttc ggaatagata tagttccaag tttaaaagaa a
//
LOCUS       DAQUWA010000145         1602 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.145, whole genome shotgun sequence.
ACCESSION   DAQUWA010000145 DAQUWA010000000
VERSION     DAQUWA010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.145"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            41..1471
                     /gene="glnA"
                     /locus_tag="R8X70_001908"
     CDS             41..1471
                     /gene="glnA"
                     /locus_tag="R8X70_001908"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEF2929652.1"
                     /translation="MGKFVNNVNEFFDFCKQNEVLFVDFRFTDMIGTWHHITYNLHAI
                     SEETFEAGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADSTIIVFCDVYDIYK
                     GQMYEKCPRSIAKKAMEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTE
                     EGEWNDDKDFADSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHH
                     EVAQGQAEIGVNFGTLVEAADNVQIYKYIVKMVAHLNGKTATFMPKPLYGDNGNGMHV
                     HMSLWKDGVNLFYDKEGYGGLSQTAINYIGGVLKNARSVAAFTNPSSNSYKRIVPGFE
                     APCILTYSCQNRSASCRVPYGIGKNSARVEIRFPDSTANPYLAFVSLLMAGLDGIKNK
                     TIPVGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRYNAFLKPVMSDIFIDDYQ
                     HLKFETQVWPVEARPTAYEFKTCYSC"
BASE COUNT          547 a          236 c          289 g          530 t
ORIGIN      
        1 gatacaattt tcataaatta tcttaaagaa ggagtaaaag atgggcaaat ttgttaacaa
       61 tgttaatgaa ttctttgatt tttgtaaaca aaacgaagtt ctttttgtag attttcgctt
      121 tactgatatg ataggaactt ggcatcatat cacctataat cttcatgcaa ttagcgaaga
      181 aacttttgaa gcaggaattc catttgatgg tagttcaatt catggatggc aacctattga
      241 aaaatcagat atgattttaa aacctgatgc gcaaagtgca tttttagatc cttttacagc
      301 tgattctact attatagttt tttgcgatgt ttatgacatt tataaaggac aaatgtatga
      361 aaaatgtcca agaagtatag caaaaaaagc aatggaacat cttaaaaata gtggcatagc
      421 tgatactgct tattttgggc ctgaaaatga attttttgtt tttgacagtg taaaaattgt
      481 agatacaact cattgttcta aatatgaagt ggatacagaa gaaggagagt ggaatgatga
      541 taaagatttc gcagatagct acaatacagg tcatcgtcca cgaaacaaag gcggatattt
      601 tcctgttcaa cctatagatt ctttggtaga tattcgctct gaaatggttc aaactcttga
      661 aaaagtagga cttaaaacct ttgttcacca tcacgaagtt gcacaagggc aagcggaaat
      721 tggagtaaat tttggcacac ttgtggaggc tgcagataat gtacaaatct acaaatatat
      781 tgtcaaaatg gtagctcatt taaatggcaa aactgcaact tttatgccaa agcctcttta
      841 tggtgacaat ggaaatggta tgcatgttca tatgagtcta tggaaagatg gtgtgaattt
      901 attctatgac aaagaaggtt atggaggact tagccaaact gctattaatt acataggtgg
      961 ggttttaaaa aatgctcgtt ctgttgcagc ttttactaat ccaagctcaa attcatacaa
     1021 aagaatagtt ccaggttttg aagctccttg tattttaact tattcttgcc aaaatagaag
     1081 tgcaagttgt cgcgtacctt atggtatagg taagaattca gctcgtgttg aaattcgttt
     1141 ccctgatagc accgctaatc cttatctagc ttttgttagt cttttaatgg caggacttga
     1201 tggaatcaaa aacaaaacca ttcctgtagg acctatggat gaaaacttat ttgatcttac
     1261 tttagatgaa attcgtgaaa aaggcataga gcaactacca cacactctaa gaggaagtct
     1321 tgaagcttta attcgttaca acgctttctt aaaacctgta atgagcgata tttttataga
     1381 tgattatcaa catttgaaat ttgaaactca agtttggcct gttgaagcgc gtccaactgc
     1441 atacgaattt aaaacttgct attcttgcta aataaaaagc aaagcgtaaa tttttaaacg
     1501 ctttgcttta tttattgata aatttcttaa atccatatct ttgatattat ataaatttat
     1561 tttcaaaaaa gaattaaaaa ttattattgc agcagaatat ta
//
LOCUS       DAQUWA010000146         1502 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.146, whole genome shotgun sequence.
ACCESSION   DAQUWA010000146 DAQUWA010000000
VERSION     DAQUWA010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.146"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..251)
                     /gene="rnpA"
                     /locus_tag="R8X70_001909"
     CDS             complement(<1..251)
                     /gene="rnpA"
                     /locus_tag="R8X70_001909"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEF2929653.1"
                     /translation="MKTFGKFSENEEFSAVYKTGKKWYCDGIIIFYLKNDEQKMAVVA
                     SKKVGKAVIRNRSKRILRALFTQFENKLQNGKYIFVAKS"
     gene            complement(248..382)
                     /gene="rpmH"
                     /locus_tag="R8X70_001910"
     CDS             complement(248..382)
                     /gene="rpmH"
                     /locus_tag="R8X70_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEF2929654.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            521..1000
                     /locus_tag="R8X70_001911"
     CDS             521..1000
                     /locus_tag="R8X70_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEF2929655.1"
                     /translation="MPKFEITTLKREELDILLEMIKEFAQYEEMEDSLQCSKEKLETS
                     LFDNQFARAFLLKEDENIIGYMIYFYTFSSFLGNGGIYLEDIYIRKIFRKKGYGRAVF
                     KFLGQICKKENLKRLDWVCLNENILGINFYEGLKAQHLKQWRNYRLSGENLEKLCEL"
     gene            997..>1502
                     /locus_tag="R8X70_001912"
     CDS             997..>1502
                     /locus_tag="R8X70_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEF2929656.1"
                     /translation="MIRTLHYLKAMGYDFTDENLKLHSKIENFKDLRKNIQECTLCHF
                     SKSRCFTLMENEIKNASLMIVDTLAHKNENEKGVLLNSKKGERLKFYLKEILGLCEKE
                     FYFSYLFKCFSNGKFDDFSLQSCLPFFWNELELVQPKMILCLGEYPFKSLGFSDFNAL
                     RGEIFAYK"
BASE COUNT          519 a          197 c          235 g          551 t
ORIGIN      
        1 tcacttttgg caacaaaaat atattttcca ttttgaagtt tgttttcaaa ttgagtaaat
       61 aaagctctta aaatacgttt tgagcgattt ctaatcactg cttttccaac ttttttacta
      121 gcaacaactg ccattttttg ctcatcattt ttaagataaa agatgataat gccatcgcaa
      181 taccactttt tacctgtttt atatacggct gaaaattctt cgttttcgct gaatttacca
      241 aaagttttca cacagcgagt ctttttctac ctttagcgcg tcttgcgttg atcaccttgc
      301 gaccattttt agtcttcata cgaacgcgaa aaccatgagt gcgttttctt ggggtaccat
      361 gtggctgata agttcttttc atttcaattt tccttaaaaa aatataaaat aagcttgtat
      421 tttatcttaa tcttacttat aaattgcttt taattaagag tattttttat tttattttga
      481 taaatttgca aaatcaaatc aacaaaggaa tatttaaaaa atgccaaaat ttgaaattac
      541 aacactcaag cgtgaagaat tggatatttt gcttgaaatg attaaagaat ttgcgcaata
      601 cgaagagatg gaagattctt tacaatgttc aaaagaaaaa cttgaaactt ctttatttga
      661 taatcaattt gcccgagcat ttttacttaa agaagatgaa aatatcatag gatatatgat
      721 ttatttttat actttttcat cctttttggg aaatggtgga atttatttag aagatattta
      781 cataagaaaa atttttcgca agaaaggcta tgggcgagca gtttttaaat ttttgggaca
      841 aatatgcaaa aaagagaatt taaaaagact tgattgggtg tgtttaaatg aaaatatttt
      901 aggtataaat ttttatgagg gtttgaaagc gcagcattta aaacaatggc gtaactatcg
      961 tttaagtgga gaaaatttag aaaaactttg tgagctatga taagaacttt acattatcta
     1021 aaggccatgg gttatgattt tacggatgaa aatttaaaac tccattcaaa aatagaaaat
     1081 tttaaagatt taagaaaaaa cattcaagaa tgtactctgt gtcatttttc caaatcacgc
     1141 tgctttacgc ttatggaaaa tgagataaaa aatgcctctc ttatgatcgt tgatacacta
     1201 gcgcataaaa atgaaaatga aaaaggagtt ttgttaaatt caaaaaaagg agaaagatta
     1261 aaattttatc tcaaagaaat tttaggactt tgcgagaaag aattttattt ttcttatctt
     1321 tttaaatgtt tttctaatgg aaaatttgat gatttttcgc tacaatcttg cttgccattt
     1381 ttttggaatg agttagaact tgtccagcct aaaatgattc tttgtttagg tgagtatcct
     1441 tttaaaagct tgggtttttc agactttaac gctcttagag gagaaatctt tgcttataaa
     1501 aa
//
LOCUS       DAQUWA010000147         1492 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.147, whole genome shotgun sequence.
ACCESSION   DAQUWA010000147 DAQUWA010000000
VERSION     DAQUWA010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1492
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.147"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..192
                     /locus_tag="R8X70_001913"
     CDS             <1..192
                     /locus_tag="R8X70_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS607 family transposase"
                     /protein_id="HEF2929657.1"
                     /translation="AKEVEVIIINKGEESVKFEEELAKDVLEIITVFSARLYGSRSKK
                     NKKLLDEMQEVVVANVSEQ"
     gene            176..1468
                     /locus_tag="R8X70_001914"
     CDS             176..1468
                     /locus_tag="R8X70_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEF2929658.1"
                     /translation="MSANNNELISISHKVELKPNNKAKTHFKKAFGCARLAYNWGLAK
                     WQEYYKQGIKKSHLELKKEFNAIKKEQFPFTYEVSKYATQQPFLNLNLAFQKFFRDLK
                     QGKVSYPKFKKKRDNFGSYYIGGDQAIIKDEKYLKVPNLGLVKMKEKLKFNGKINSFT
                     ISQSADKFFVSFSMQISKDEYLKTHNKAKNNNLALGIDVGLKSFLSLSNGLEIKAPKL
                     LAKLNRLMIKRARQLSKKQHAKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSDF
                     LHKLTSSLTANVKYFCLEDLNVKGMMSNHRLAKSISDVSFYEFKRQLEYKSSYNDKEI
                     YQVDRFYPSSKLCSNCGTIKENLTLKDRVYICDECGISIDRDYNASLNLLSQLQQKIG
                     KVLAEFTPADLTALLNDLAINRIATSKVEAGIQQKSYL"
BASE COUNT          610 a          196 c          245 g          441 t
ORIGIN      
        1 gccaaagaag tagaagtaat aatcataaat aaaggcgaag aaagcgtaaa atttgaagaa
       61 gaattagcca aagatgtgtt agaaataatc acagtatttt cagctagact ttatggctca
      121 cgctcaaaga aaaataaaaa acttttagat gaaatgcaag aagtggtggt agcaaatgtc
      181 agcgaacaat aatgaactta ttagcatttc tcataaggta gaattaaagc caaacaataa
      241 ggctaaaact cattttaaaa aagcctttgg ttgtgctaga cttgcttata attggggact
      301 cgctaaatgg caagaatact ataagcaagg cattaaaaaa tctcatttag agcttaaaaa
      361 agagtttaat gctataaaaa aagaacaatt tccttttact tatgaagtaa gtaaatatgc
      421 tacgcaacag ccttttttaa atctaaatct agcatttcaa aaatttttta gagatttaaa
      481 acaaggtaaa gtaagctatc caaagtttaa gaaaaaaaga gataactttg gctcttacta
      541 cataggtgga gaccaagcaa taatcaaaga tgaaaaatat ctaaaagtgc caaatttagg
      601 acttgtaaaa atgaaagaga aattgaaatt taatggtaaa atcaattctt ttactatttc
      661 tcaaagtgct gataaattct ttgtttcttt tagtatgcaa atcagtaaag atgagtatct
      721 aaaaactcat aataaagcta aaaataataa tctagcactt ggcatagatg taggcttaaa
      781 atcgttttta agtttatcta atggcttaga gataaaagca cctaaactat tagctaagct
      841 taatcgctta atgataaaaa gagctagaca gctaagcaaa aagcaacacg caaaaaccaa
      901 gcaagaagca ttacaaggca ttaaaaaatc tagcaattat ctaaaagcaa gtattaagct
      961 aaataaatta catcgtaaaa tcgcaaatat aagaagtgat tttttacaca agcttacttc
     1021 tagcttgaca gcaaatgtta aatatttttg cttagaggat ttaaatgtaa aagggatgat
     1081 gagtaatcat agacttgcta aatctataag cgatgtaagt ttttatgagt ttaaaaggca
     1141 actagaatat aaatctagct acaacgataa agaaatctat caagtagata gattttatcc
     1201 tagttctaaa ttatgctcta attgtggaac tataaaagag aatttaactc taaaagatag
     1261 agtttatatt tgcgatgaat gtggaattag cattgataga gactataatg ctagtcttaa
     1321 tttgctttca caattacagc aaaaaatagg caaagttctt gccgaattta cgcctgcgga
     1381 cttgacagct ctgttgaatg atttagcaat aaatcgtatt gcaactagca aggttgaggc
     1441 aggaatacaa caaaaatcct atttatagag ttttatatct ttttatagga tt
//
LOCUS       DAQUWA010000148         1454 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.148, whole genome shotgun sequence.
ACCESSION   DAQUWA010000148 DAQUWA010000000
VERSION     DAQUWA010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.148"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>1454
                     /locus_tag="R8X70_001915"
     CDS             <1..>1454
                     /locus_tag="R8X70_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929659.1"
                     /translation="FFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGN
                     DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKY
                     ASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGICFIIKSIV
                     HPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNI
                     IFIGQDLAYAENGNSHPDDYQNSANYESQTYEHILTEAYGGKEKIKTHHVWLMFKRNL
                     EQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN
                     KQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDI
                     DKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL
                     EFMELVYGHIKAQENALIKNILPLEEKLKERKLD"
BASE COUNT          564 a          184 c          196 g          510 t
ORIGIN      
        1 tttctttcaa ttttctagaa tttatttttt agaattaatg agtcattatt atgaaagatt
       61 tcatgaagat attttaggat tgaataaaaa attagcagaa aattttaaaa attctattgt
      121 ttctcatggc aatgatcctc ttgatgctct tcaaggcata gaacaatttg tttataatct
      181 tcctcaaatg attactcatc ctagttataa agaattactt tctaaaagaa aaaatttaag
      241 tgatacagct atcattgttt ctacaggacc atctcttact aaacaattgc ctttattaaa
      301 aaagtatgct agcaaagcta cgattttttg tgcggattct tcttatccta ttttagctaa
      361 acatggtata aagcctgatt atgtttgtat gctagaaaga actgaaatta ctgctgagtt
      421 tttcaatcat gattttgggg aatttgataa tggaatttgt tttattatca aatccatagt
      481 acatcctaat gccataaatt acctaaccaa aaaaaccgat aattttacta tagtttcaac
      541 ctatgcaagt tttatacaat atttaaaatt agattatttt ggatatttta acatgggatt
      601 tagtgttgca catatggctt gttatctttc cttacattta aatcataaaa acatcatttt
      661 tataggacag gatttagctt atgctgaaaa tggcaattct catcctgatg attatcaaaa
      721 ttcagctaat tatgaaagtc aaacgtatga acatatttta accgaggctt atggcgggaa
      781 agaaaaaatc aaaactcacc atgtctggct tatgtttaaa cgaaatttag aacaagatgt
      841 gcaaaaaata caaaagtatt tagatactaa agtttacaac tgtaccgaag gtggagcaag
      901 gatagaagga accatagaaa aaccttttct atgggcttgt gagaatttac ttcataaaga
      961 tttaaataaa ccttttgaaa aattagaacc tttaagttta aataaacaaa atgagttttt
     1021 acttaaggct tattataaag tttgtaaaag tattgaacat tgtagagatt ttaacgataa
     1081 ttttattaaa gtttatgata aaataaaaaa ttcttttacg agtttacaaa attctcaaaa
     1141 aaatgaaatt tttattcaag aaattattca agatatagat aaaaccaaaa ctcaaataga
     1201 tgaactttac aatactcaaa aagatttgat acaaatttta ggtcccttac taactcaatt
     1261 tgaacttaat cttgctagaa tttatgtctt aaatcctaaa accaaagaag atgcttttaa
     1321 taaaagtatt ctttggataa aagaacattt agaatttatg gaattagttt atggacatat
     1381 taaagcacaa gaaaatgctt tgataaaaaa tatacttcct ttagaagaaa aacttaaaga
     1441 aagaaaatta gata
//
LOCUS       DAQUWA010000149         1449 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.149, whole genome shotgun sequence.
ACCESSION   DAQUWA010000149 DAQUWA010000000
VERSION     DAQUWA010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.149"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..334
                     /locus_tag="R8X70_001916"
     CDS             <1..334
                     /locus_tag="R8X70_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3825 domain-containing protein"
                     /protein_id="HEF2929660.1"
                     /translation="FERKERLPEIVKKLNDRFIGHIINGELKIIKDNYNLQKMIIPAA
                     YKQRVVLYIPLKLQEESVDTIVVVEKEEVKNEQYYAVRTILNPHDNIYKTARVLSIVE
                     SEWVKNTI"
     gene            974..1201
                     /locus_tag="R8X70_001917"
     CDS             974..1201
                     /locus_tag="R8X70_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929661.1"
                     /translation="MTLIIENVNENFLPAFKGLAKSINAKCKISKPKLSSFESRILNA
                     SKELDKEKKVNTALSFNSHQDFVKAYQNGKI"
     gene            1188..1449
                     /locus_tag="R8X70_001918"
                     /pseudo
     CDS             1188..1449
                     /locus_tag="R8X70_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782140.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
BASE COUNT          617 a          167 c          215 g          450 t
ORIGIN      
        1 ttttgagaga aaagagcgat tacctgaaat tgtgaaaaaa ctaaatgata ggttcatagg
       61 acacattatt aatggtgaat tgaaaatcat caaagataat tataatcttc aaaagatgat
      121 tattcctgca gcttataagc aaagagtagt tttatacatt cctttgaaac ttcaagaaga
      181 atcagttgac acgatagttg tagttgaaaa agaagaggta aaaaacgagc agtattacgc
      241 tgtgagaact atactaaatc cgcatgataa tatttacaaa accgcaagag ttctttcgat
      301 agttgaatct gaatgggtaa aaaacaccat ttgaaagtga aaacattggt aaaataggct
      361 tttgatataa gtctatttta tcatataaac aattaacaag agactaaaac cgcatactca
      421 aaatatatat taaattaata attttaccat gtaaacaatt aataataggt taaaacaaat
      481 tttttgtaaa ttaaaacaat acaagataat aaaaattcat ttaaaaatac tataattaaa
      541 gcgtattaag tatggctact ctttcggtta taagaaggag gcatgatgag taagatcatt
      601 gagtttttag ttcttgtctt agaattaatt aacgagataa tcaaactcgt tgattatctc
      661 acttaaaaaa ccgaaataat tataaataaa ccacgcttag tcttagctta atacaaacaa
      721 aaaaactttt aaactttaca aaaataaatg atcggaagtg cgtggcttct gattgtttaa
      781 tgcttaaaag caatgcgaac aaagtagcgt gaaaatacaa ttaaatcgat gaagattttg
      841 gcgacttttc ccaagtcaaa taaaaaagaa atccgtttca aacccctaaa aataggcatt
      901 ttatagcaaa aatacttgca aaatttatta aaatatggta taattatgtt atataatttg
      961 aaaggagttg cttatgactc ttattattga aaatgttaat gaaaattttt tacctgcatt
     1021 caagggttta gcaaaaagca taaatgccaa atgtaaaatt tctaagccta agttgagtag
     1081 ttttgaaagt aggatattaa atgcaagcaa agaacttgat aaagaaaaaa aagtcaatac
     1141 tgcattaagt tttaattcgc atcaagactt tgtgaaagct tatcaaaatg gcaaaatata
     1201 aaatttatta ccataaagat tttataaaag cttacaaaaa ataagtgatg aagagcgtaa
     1261 aataactgat gaagttattg taaaactttc taatgatgag aatttagaac ctaaatataa
     1321 agatcatcaa ttaaaaggtg tattaaaaga ttttagagaa tgtcatataa agtctaactt
     1381 gttattaatt tatcaaaaac ataataatga gttagagcta aatattttaa aactaggtag
     1441 tcatagtaa
//
LOCUS       DAQUWA010000150         1421 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.150, whole genome shotgun sequence.
ACCESSION   DAQUWA010000150 DAQUWA010000000
VERSION     DAQUWA010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.150"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>1421
                     /locus_tag="R8X70_001919"
     CDS             <1..>1421
                     /locus_tag="R8X70_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929662.1"
                     /translation="KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQT
                     QDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDST
                     DTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANT
                     ATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDRDVLFVCVSWVYPQ
                     TIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFI
                     GQDLAYAKDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSL
                     QNTISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN
                     EFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNK
                     LEDIKQMQDLYDILQSLFIQFEL"
BASE COUNT          530 a          174 c          209 g          508 t
ORIGIN      
        1 aaaaatcatc agcatattgt tgtttttgaa aaagatatag aaatcatttg gataatgttt
       61 catatcttag atttttcaaa tgaattgcaa agtgcaagat tgatgatttt ggaaaatgat
      121 aaattacaaa ctcaagatta taatgaactt tgttctttta aacctttctt tcaattttct
      181 agaatttatt ttttagaatt aatgagtcat tattatgaaa gatttcatga agatgttttg
      241 gagttaaata aaaagctagt acagtatttt aaagattcta ttatttctca tggtaatgat
      301 tcaacagata ctcttcaagg catagaacaa tttgtttata acttacctca aatgatcact
      361 catcctagtt ataaagaatt actttccaaa agaaaaaatt taagtgatac agctattatt
      421 gtttctacag gaccatctct tactaaacaa cttcctttgt taaaaaaata tgctaataca
      481 gctacaattt tttgtgccga tagtgcttat cctattttgg ctaaacatga tatcaagcct
      541 gattatgtac tttctttaga aaggattcct ttaacttctg aattttttaa taatgatttt
      601 ggggaatttg atagggatgt tttgtttgtt tgtgtaagtt gggtctatcc acaaactata
      661 aaatatcttc aaaaaaataa tagaaatttc atgcttattt caagaccttc tgatttcatt
      721 aaaaatatta attttcatca atatggctat gtaggctatg ggccaagcgt tgcacatatg
      781 gcttatgaat ttgcaactca tctaaactat aaaaatatca ttttcatagg acaagattta
      841 gcttatgcta aagatggatt ttctcatacc aaagattata gcaatcttga taaacatgaa
      901 ggacattttc aaagagataa gggaaaattt caatgtctag cctatggagg caacggaaag
      961 gttgaaagtt caggaatttg gactatgttt agattctctt tgcaaaatac catttcaaga
     1021 aatattattt caaccaccta caactgcacc gaaggtggag caaggataga aggaactata
     1081 gaaaaacctt ttttatgggc ttgtgagaat ttacttgata aagatttaaa taaacctttt
     1141 gaaaaattag aacctttaag tttaaataaa caaaatgagt ttttacttaa ggcttattat
     1201 aaagtttatc aaagtattaa gcattgtaga gattttaata aaattctaag taatgatttt
     1261 gaaaatatac aaagtatata tttgagttta aatgaaaaag aagaggatat caatttagct
     1321 attgaaaaaa tagatgagtt taaaaacaaa cttgaagata taaaacaaat gcaagatttg
     1381 tatgatatct tgcaatcttt attcatacaa tttgaactta a
//
LOCUS       DAQUWA010000151         1409 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.151, whole genome shotgun sequence.
ACCESSION   DAQUWA010000151 DAQUWA010000000
VERSION     DAQUWA010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.151"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..257
                     /locus_tag="R8X70_001920"
     CDS             <1..257
                     /locus_tag="R8X70_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929663.1"
                     /translation="VLLQVLELLETFRSDENEKMARISSELTEILENEENLEKILNAK
                     NLEELLNILTALNEDKMIKVYEDSYLKEKFPNVMVDKFLK"
     gene            273..>1409
                     /locus_tag="R8X70_001921"
     CDS             273..>1409
                     /locus_tag="R8X70_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEF2929664.1"
                     /translation="MMSNLAPQNDVLNLTPSKTSTTSSSFSKTSKNKEHESSDSKIST
                     QDDTESFLNSLLNSIDETNEFLPDHMKISQKEVVNEAMSRLQKGAFDESDKMSIFESA
                     SFMQILSLLDKLKTDTADVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLG
                     LNVKNIKVDRLLDLKATFPNLDKADFFKGAVDNVFKEIINNKISNVSKNLNHNLQNTT
                     HTTSTHSTQKTNSKDSGSLLSQTLKNLDSILSSKESKHEKNDKVKSKIEEDVTDAKNT
                     LKNIKNDEFAKNLTEELNIKDKKNQDNLNKDNNLKDLIKDSTKQDKNSNKELKDNAST
                     QELTNLKDLNKENKDLNKDFNKELNKNQGDMQGQNKNLKNNNQNL"
BASE COUNT          619 a          167 c          201 g          422 t
ORIGIN      
        1 aagttttgct tcaagtttta gagcttttag aaacttttag atcagatgaa aacgaaaaaa
       61 tggcaagaat ttcaagtgag cttacagaaa ttttagaaaa tgaagaaaat ttagagaaaa
      121 ttttaaatgc taaaaattta gaagagcttt taaatatctt aactgcttta aatgaagata
      181 agatgattaa agtatatgaa gattcttatt tgaaagaaaa atttcctaat gtaatggtag
      241 ataaattttt aaaataattt tttgaaggaa aagtgatgtc aaatttagct ccgcaaaatg
      301 atgttttaaa tcttacgccg agtaaaactt ctactactag cagttctttt agtaaaacta
      361 gtaaaaataa agaacatgaa agtagtgata gtaaaatttc aacccaagat gatacagaaa
      421 gttttttaaa ttctttgctt aattctattg atgaaaccaa tgaattttta cctgatcata
      481 tgaagatcag tcaaaaagaa gttgttaatg aagcgatgag cagacttcaa aaaggagctt
      541 ttgatgagag tgataagatg agcattttcg aatctgcttc ttttatgcaa attctttctt
      601 tattggataa gctaaaaaca gatacagcag atgttaaact ggcaaatctt tctactcaac
      661 tttcaagtct tatcaaaaca gaggctaatt ttaatgcttt aaaaggcgca tcaaatctta
      721 gcgagctttt ggacatagct aaagatttgg gcttaaatgt aaaaaatatt aaagtagatc
      781 gtcttcttga tcttaaagca acttttccaa atttagataa ggctgatttt tttaaaggtg
      841 ctgtagataa tgtttttaaa gaaatcatca ataataaaat ttccaatgtg agtaaaaatt
      901 taaatcacaa tttacaaaat acaactcata ctacaagcac tcattctacg caaaaaacaa
      961 attctaaaga tagcggttct ttgctttctc aaactttaaa aaatttagat tccatacttt
     1021 catccaaaga aagcaaacac gaaaaaaacg ataaagttaa atcaaaaata gaagaagatg
     1081 tcacagatgc taaaaatact ttaaaaaata tcaaaaatga tgagtttgca aaaaatttaa
     1141 cagaagagtt aaatataaaa gataaaaaaa accaagataa tttaaataaa gataacaatc
     1201 ttaaagattt gattaaagat agtacaaaac aagataaaaa ttcaaacaaa gagctaaaag
     1261 acaatgcaag tactcaggag cttacaaatc ttaaagattt aaataaagaa aacaaagact
     1321 taaacaaaga ttttaataaa gagttaaata aaaatcaagg ggatatgcaa ggacaaaata
     1381 aaaatttaaa gaacaataat caaaattta
//
LOCUS       DAQUWA010000152         1404 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.152, whole genome shotgun sequence.
ACCESSION   DAQUWA010000152 DAQUWA010000000
VERSION     DAQUWA010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.152"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>1404
                     /locus_tag="R8X70_001922"
     CDS             <1..>1404
                     /locus_tag="R8X70_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929665.1"
                     /translation="LTLFKTEYNKYPVLFFYGFGNGMFYKTLCKNKQHKHIIIFEDNL
                     EILTLAFHLFDFSEELKKEQLILFYTPNINTAQLTTLFTYEIIQKSVKIFNLFIHNDF
                     YQQFYSTQIQNINTQLIEMIRFIVLNKGNDPHDSLVGIKHTLDNLPKMLNHGIFQEFL
                     KERRAKVKNAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYVILGKYGIKPDYVCML
                     ERDDIVSKCFDNDFGDFNKGILFILASVVHKEVLDFLEKDQRTYMLVHRPLNFAASLK
                     LDEYGYLGVGHSVSNMIYELAGALRFENIIFIGQDLAYGEDGSSHPKEHIHGSQGEEI
                     RGEKYTLAYGGKGKVRTQLTWNLFRQAFEKDIFWAKEKLNITTYNCTEGGARIEGTIE
                     KPFLWACENLLDKDLNKPFDFPKFLDKKLAKEKLEKTKKYLQKSILESKEFIKKTQTQ
                     LQKLRYTLEKNDKNFQT"
BASE COUNT          550 a          198 c          203 g          453 t
ORIGIN      
        1 accttactct gtttaaaacc gaatataaca aatatcctgt tttgtttttt tatggctttg
       61 gaaatggaat gttttataaa actttatgta aaaacaaaca acataaacac attatcattt
      121 ttgaagacaa tcttgaaatt ttaactttag cttttcattt atttgatttt agcgaagaat
      181 taaaaaaaga acaactaata cttttttata ctccaaatat taatacagca caactcacca
      241 cactttttac ttatgaaatc attcaaaaaa gtgtaaaaat ttttaatctt tttatccata
      301 atgattttta tcaacaattt tatagcactc aaatacaaaa tataaatact caactgatag
      361 aaatgatacg atttatcgtt ttaaacaaag gtaatgatcc acatgattct ttagttggaa
      421 tcaaacatac cctagataat ctccctaaaa tgttaaatca tggaattttt caagaatttc
      481 tcaaagaaag aagagctaag gttaaaaatg ctatcattgt ttctacagga ccaagtctta
      541 taaaacaact tcctttatta aaaaagtatg ctaataaagc tacgattttt tgtgcagata
      601 gtgcttatgt tatccttgga aaatacggta taaagcctga ttatgtttgc atgctagagc
      661 gtgatgatat agtttctaaa tgttttgata atgattttgg cgattttaac aaaggcatac
      721 ttttcatact tgcttctgtg gttcacaaag aagtattaga ttttttagaa aaagatcaaa
      781 gaacttatat gcttgtacat cgccctttaa attttgcagc tagtttaaaa cttgatgaat
      841 atggatatct tggagtagga catagtgttt caaatatgat ctatgaacta gcaggagctt
      901 taagatttga aaatatcatt tttataggac aggatttagc ttatggcgag gatggaagtt
      961 cacatcctaa agagcatata catggaagtc aaggtgaaga aatcagagga gaaaaatata
     1021 ccctagctta tggaggaaaa ggcaaagtaa gaacacaact tacttggaat ttgtttcgtc
     1081 aagcttttga aaaagatata ttttgggcaa aagaaaaact caatatcacc acctacaact
     1141 gcaccgaagg tggagcaaga atagaaggaa ctatagaaaa acctttttta tgggcttgtg
     1201 agaatttact tgataaagat ttaaataaac cttttgattt tccaaaattt ctagataaaa
     1261 aactagccaa agaaaaatta gaaaaaacaa aaaaatatct ccaaaaaagc attttagaat
     1321 ccaaagaatt tataaaaaaa actcaaactc agcttcaaaa gcttagatac actttagaaa
     1381 aaaatgacaa gaattttcaa actc
//
LOCUS       DAQUWA010000153         1362 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.153, whole genome shotgun sequence.
ACCESSION   DAQUWA010000153 DAQUWA010000000
VERSION     DAQUWA010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.153"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            97..816
                     /locus_tag="R8X70_001923"
     CDS             97..816
                     /locus_tag="R8X70_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside N(3)-acetyltransferase"
                     /protein_id="HEF2929666.1"
                     /translation="MDIGIKAGDMICVHTEIFNLGIPLLTKNEYLKALIECFLEILTN
                     NGTLVMPTFSYSFCKNEIYDKNKSKCTVGLLNNFFRKLPEVTRSNDPIFSFAAYGLKA
                     NLFQVENNSCFGKNSGYDILTKNNAKIVYLGADWAHTFIHYIEEQIGVDYRYFKTFQG
                     YIIDENNQKYEKKINYYVRCLDKPSELNLSTIAKLLEESGSLKKKSFGGTSISAIDTN
                     DFKKIIIQALNTDKYILVRKD"
     gene            821..1048
                     /locus_tag="R8X70_001924"
     CDS             821..1048
                     /locus_tag="R8X70_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEF2929667.1"
                     /translation="MEKQFYEILKNILEIEVNEHTNLSMNNCPEWNSLAHIDIIMSLE
                     EEFEIKFDKEKLTELNSQNMLLKEIKKLKNE"
     gene            1041..>1362
                     /locus_tag="R8X70_001925"
     CDS             1041..>1362
                     /locus_tag="R8X70_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929668.1"
                     /translation="MNSISQKNLELFSKLSGDFNPLHLDQEFAKNSYYGDQVIYGIYQ
                     VFLTLENFFKKNQKNIKIQKIKASFINPLFKNEDFKLKSIKSKNNFLKKYEITNKNKI
                     LSKID"
BASE COUNT          589 a          174 c          170 g          429 t
ORIGIN      
        1 gaaattatat caaaaaatta aggatcaaac atcaacaaaa aactaataga gcataattca
       61 aatattttaa ccaaagaaga ttttaaaaac tgtcttatgg atataggaat aaaagccggg
      121 gatatgattt gtgttcatac ggaaattttt aacttaggca tacctttatt gacaaaaaat
      181 gaatatctaa aagctttgat agaatgtttt ttagaaattc taacaaacaa tggcaccttg
      241 gttatgccaa cattttctta tagtttttgc aaaaatgaaa tttatgataa aaataaatct
      301 aaatgcaccg taggattatt aaataatttt tttcgtaaac tacctgaagt tacccggagt
      361 aatgatccta ttttttcttt tgcggcatac ggactcaaag ccaacttatt tcaagtagaa
      421 aataattctt gctttggaaa aaattctggt tacgatattc ttacaaaaaa taatgcaaaa
      481 atagtctacc taggtgccga ctgggcacac acctttattc actacattga agaacaaatt
      541 ggagttgatt atcgctattt caaaacattt caaggatata taatagatga aaataatcaa
      601 aaatacgaaa aaaaaataaa ttactatgta agatgcttag acaaaccctc tgaactaaat
      661 ctttcaacca ttgctaaact tttagaagaa agcggctctc ttaaaaagaa gtcatttggt
      721 ggaacaagta tttcagcaat agatacaaat gattttaaaa aaattatcat acaagcttta
      781 aatacagata aatatatttt agtaagaaag gattaaaaaa atggaaaagc aattttatga
      841 aattttaaaa aatatactag aaattgaagt taacgaacat acaaatttaa gtatgaataa
      901 ttgtcccgaa tggaattctt tggctcatat tgatatcatt atgagcctag aagaagaatt
      961 tgaaatcaaa tttgacaaag aaaaacttac agaattaaac tcacaaaata tgcttttaaa
     1021 agaaattaaa aagttaaaaa atgaatagta tttctcaaaa aaatttagaa cttttttcaa
     1081 aattaagcgg tgatttcaac cctttgcatt tggatcaaga atttgccaaa aattcttatt
     1141 atggcgatca agttatctat ggaatttatc aagtttttct aacactggaa aactttttta
     1201 aaaaaaatca aaaaaatatt aaaattcaaa aaatcaaagc cagtttcatt aatccacttt
     1261 tcaaaaatga agactttaaa ctaaaatcta taaaatccaa aaataatttt ttaaaaaaat
     1321 atgaaattac aaataaaaat aaaattttaa gcaaaattga tt
//
LOCUS       DAQUWA010000154         1350 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.154, whole genome shotgun sequence.
ACCESSION   DAQUWA010000154 DAQUWA010000000
VERSION     DAQUWA010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.154"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..608)
                     /locus_tag="R8X70_001926"
     CDS             complement(<1..608)
                     /locus_tag="R8X70_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEF2929669.1"
                     /translation="MFPKWDDNYSVHNAKIDEQHKKLFELAGKVEFMFDRPVYKDDIK
                     ALLADFFNYMKDHFNDEEKYMKLIGYPGLEEHKKIHKEIIQSMIDLIKNIKSTNDLKE
                     KLYTVSKKWLLEHILYEDMKVEQYRRSSLSSEDDSEVSFEEVKEEKDDETALYFYTCE
                     CVGQIHDVPFGIHQKIQLKGAKFKCKKCKMAIQFYKKHSESF"
     gene            complement(589..1278)
                     /locus_tag="R8X70_001927"
     CDS             complement(589..1278)
                     /locus_tag="R8X70_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEF2929670.1"
                     /translation="MDKLIPAWDEKYSINDEKIDAQHQKLFELAAKIENAVYKFVQRD
                     ELKEILTELFNYMKDHFSNEEDYMQEISYPYLNEHKIMHKNIIHDMSHLIQNIKTTND
                     LKEKLYTIMSDWLLEHILHHDVMIGNWLSEQLLAKQEEELEKLQQEDLQQEKQYENNP
                     NPSPPQIKKEYDFIYSCPCRTNHFLSYIEHLDIICHKKQLRCKKCQKNLFYVRSEIKT
                     EKRNNDVSKVG"
BASE COUNT          399 a          199 c          187 g          565 t
ORIGIN      
        1 tcaaaagatt cggaatgttt tttataaaat tgtatggcca tcttgcattt tttacactta
       61 aatttagcac cttttaattg tattttttga tgaattccaa aaggcacatc gtgaatttgt
      121 ccaacacact cgcaagtata aaaatataaa gctgtttcat catctttttc ttcttttact
      181 tcttcaaaac ttacttcact atcatcttca gaggataaag aagagcgtct gtattgttct
      241 actttcatat cttcataaag tatatgttct aagagccatt ttttagaaac cgtgtaaagt
      301 ttttctttta aatcattggt tgattttatg tttttaatga ggtctatcat ggattggatg
      361 atttctttat gtatcttttt atgctcttct aagccaggat atcctataag cttcatatat
      421 ttttcttcat cattaaaatg atctttcata tagttaaaaa aatcagccaa tagagctttg
      481 atatcatctt tatacacggg tcgatcaaac ataaattcaa ccttacctgc taattcaaaa
      541 agttttttgt gttgctcatc aatcttggca ttatgaacgc tataattatc atcccacttt
      601 ggaaacatca ttattccttt tttcagtttt gatttcactt cttacataaa atagattttt
      661 ttgacatttt ttacatctta gttgtttttt atgacaaata atatcaagat gctctatata
      721 ggaaagaaag tgatttgttc tacaagggca agaatagata aaatcgtatt cttttttgat
      781 ttgaggaggg cttggatttg gattgttttc atattgtttt tcttgttgaa gatcctcttg
      841 ttgaagtttt tctagctctt cttcttgttt ggctaataat tgctctgaaa gccaatttcc
      901 tatcataaca tcatgatgta aaatatgttc taatagccaa tctgacatta tagtataaag
      961 tttttctttt aaatcattgg tagtctttat attttggata agatgcgaca tatcgtggat
     1021 aatgtttttg tgcattattt tatgttcatt taaataagga taagaaatct cttgcatata
     1081 atcctcttca ttactgaagt gatctttcat ataattaaag agttcggtaa gaatttcttt
     1141 aagctcatcg cgttgaacga atttataaac agcattttca attttagcag ctaattcaaa
     1201 aagtttttgg tgttgcgcgt ctattttctc atcatttatg ctgtattttt catcccaagc
     1261 aggaattaat ttatccaaag ttttctccaa ataaatctca attatttgta tgttttgata
     1321 ttgaggtatg ttatcgtatt ttatattaaa
//
LOCUS       DAQUWA010000155         1348 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.155, whole genome shotgun sequence.
ACCESSION   DAQUWA010000155 DAQUWA010000000
VERSION     DAQUWA010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.155"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..398
                     /locus_tag="R8X70_001928"
     CDS             <1..398
                     /locus_tag="R8X70_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA repair protein Rad50"
                     /protein_id="HEF2929671.1"
                     /translation="FDEKNQYLDKIPDPILNLIKDENNKLTSFYNEMRKRIKEDNFQN
                     ISYSSDIVFNNTMQCNKNKENGNPFFHYIRATAMTPEHFKKLFHSMNISKEILTKIQQ
                     AGFTIVTTSDPNKRKNFHEELKNKEILTD"
     gene            complement(462..635)
                     /locus_tag="R8X70_001929"
     CDS             complement(462..635)
                     /locus_tag="R8X70_001929"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929672.1"
                     /translation="MRKEYDFSKAMRNPYVDNELKGNQITSYYLDYLFLFKENQKKFQ
                     SLYNEHKKNNNKS"
     gene            complement(655..1044)
                     /locus_tag="R8X70_001930"
     CDS             complement(655..1044)
                     /locus_tag="R8X70_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HEF2929673.1"
                     /translation="MKYIELSEAIAIHEKIIEKTGGLSGYNETQIGYLASALEHIKND
                     DYYPTIIDKITHLIFSCVKFHPFADGNKRTSIFLGMHFLDLDGKYNDKFAEVMEDIVV
                     SVADDSITKDDLNQILQNFIDKNISNN"
     gene            complement(1041..1190)
                     /locus_tag="R8X70_001931"
     CDS             complement(1041..1190)
                     /locus_tag="R8X70_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929674.1"
                     /translation="MKTTEYNTQQKNNKEYLAEREAVKKTMAKMEKELEKPAINAVFQ
                     RLKNK"
BASE COUNT          494 a          191 c          137 g          526 t
ORIGIN      
        1 attttgatga aaaaaaccaa tatttagata aaattccaga tcctatactt aatcttatta
       61 aagatgagaa taacaaatta acttcatttt ataatgagat gagaaagcgt atcaaagaag
      121 ataatttcca aaacattagt tacagcagtg acatagtgtt taataatact atgcaatgta
      181 ataaaaataa agaaaatggt aatccatttt ttcattatat tagagcaacg gcaatgacac
      241 ctgaacattt taaaaaatta ttccatagta tgaatatttc aaaagaaatt cttacgaaaa
      301 ttcaacaagc aggatttacc attgtaacta caagcgaccc taataaaaga aaaaattttc
      361 atgaggaatt aaaaaataaa gaaattttga cagattaaaa caaatattgt taagtgtctc
      421 aaattattga aaatcaaaac acttaacaat cttattttca ttcaagattt attattgttt
      481 ttcttgtgtt cattatataa actttgaaat tttttctgat tttctttgaa taaaaataaa
      541 taatctaaat aatatgaagt tatttgattg ccttttaact cattatccac ataaggattt
      601 ctcatagctt ttgaaaaatc atattctttt ctcacaatca cttctttgag tttcttaatt
      661 attagaaata tttttatcaa taaaattttg taaaatttga tttaaatcat cttttgtgat
      721 agaatcatct gcaacactaa caacaatatc ttccataact tcggcaaatt tatcattata
      781 tttgccatct agatctaaaa agtgcatacc tagaaatatc gaagtccgtt tatttccatc
      841 agcaaatgga tgaaatttta cacaggaaaa tattaaatgt gtaattttat caattattgt
      901 aggataataa tcatcgtttt ttatatgctc taatgcacta gccaaatatc ctatttgtgt
      961 ttcattataa ccacttaatc cgcctgtttt ttcaataatc ttttcgtgta tagcaatagc
     1021 ttcgcttagt tctatatatt tcatttattt ttaagtcttt gaaacaccgc atttatagca
     1081 ggtttttcta attctttttc catttttgcc atagtttttt taactgcttc tctctcagct
     1141 aaatattctt tattattttt ttgttgcgta ttatattctg tggttttcat tttactaccc
     1201 tctttattct ttcaattaat atcctaaata ctgtatagac tattttaaca tttatatttg
     1261 attagcaaat caatatgaag ctaaaaaaat taatttgcta attataccca aattaatttt
     1321 cattaagcaa taaataaaac aatcaagt
//
LOCUS       DAQUWA010000156         1325 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.156, whole genome shotgun sequence.
ACCESSION   DAQUWA010000156 DAQUWA010000000
VERSION     DAQUWA010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.156"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            385..627
                     /locus_tag="R8X70_001932"
                     /pseudo
     CDS             385..627
                     /locus_tag="R8X70_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049719.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            751..978
                     /locus_tag="R8X70_001933"
     CDS             751..978
                     /locus_tag="R8X70_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HEF2929675.1"
                     /translation="MSKKDKIIKDLKNNPNNVRFETLKILLESEGYECFNKGGSHYQF
                     RKKECDLITIPFKRPIKAIYVKMVLKAITGE"
     gene            982..>1325
                     /locus_tag="R8X70_001934"
     CDS             982..>1325
                     /locus_tag="R8X70_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEF2929676.1"
                     /translation="MKDLDYYLNLPYEIIIKKLDEKDGGGYFARYKDFPYIMGDGENE
                     IEALKDLKEAFKGALEVMLEKGDYIKEPIDNEAKIRINITLPKSLVEAIDTISDNRSK
                     FLADLANSAIKS"
BASE COUNT          550 a          170 c          189 g          416 t
ORIGIN      
        1 ttaaactaaa tacaataatg tttagaactt tataaaagta taaatatttg aagtcttcac
       61 cctgcttttt ttgaagactt tttagtgttt taaggacaaa ctaagcaggg tttctttaaa
      121 atatcattaa ctatattaaa agattagttc ttatctagct ctttatcgct acgataagga
      181 ctactaaaag cattaagatt ataataactt cgttcatctt aacctccttt caaacttttt
      241 acaaagtctt caaagagata tccttaaaac tataaaatta tacgtaaaaa atacttaaaa
      301 atttaatttc atttcaaaac acactatatt tgaaatagtc atttttggaa aaatccttaa
      361 aactaaacta aggagaattc aaaaatggct ttaccttcaa tgggacatac ctcacccgca
      421 acggaaaatg ttaagttaaa acaatcaata tatgaaacga ttattaaaat tggagctact
      481 gaaacaccaa ttttaaataa aataggtact tcaaaggtta caaatccttt aactcatagt
      541 tggattactg atacttttga agaaccaaaa aagaatgcga atttagagtt aagcaaattt
      601 gtaggtgaga caaaaaacac agctcaataa tcccagtctt aatactttta attaaacata
      661 caaagagagt aagattaaaa gaattgcgtt cggtttataa gcgatactta ataaaaagtg
      721 tgtataatac atactcataa ggatatcata ttgagtaaaa aagataaaat tattaaagat
      781 ttaaaaaata atcctaacaa tgtgcgcttt gaaacgctta agattttatt agaaagcgaa
      841 ggttatgaat gttttaataa aggcggatca cattatcaat ttagaaaaaa agaatgtgat
      901 cttattacta ttccatttaa acgccctata aaggctatat atgtcaaaat ggttttaaaa
      961 gctataacag gagaatgaat tatgaaagac ttagattact atcttaatct accttatgaa
     1021 attattataa aaaaacttga tgaaaaagat ggcggaggat attttgcaag atataaagat
     1081 ttcccttata ttatgggaga tggtgaaaat gaaatagaag ccttaaaaga tctcaaagaa
     1141 gcatttaaag gagcattaga agttatgctt gaaaaaggtg attatattaa agaacctatt
     1201 gataatgaag caaaaattag aattaatatt accttgccta aaagcttagt agaggcaata
     1261 gatacaataa gcgataatag aagtaaattc ttagctgatc ttgcaaatag cgctataaag
     1321 tctta
//
LOCUS       DAQUWA010000157         1316 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.157, whole genome shotgun sequence.
ACCESSION   DAQUWA010000157 DAQUWA010000000
VERSION     DAQUWA010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.157"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>1316
                     /locus_tag="R8X70_001935"
     CDS             <1..>1316
                     /locus_tag="R8X70_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929677.1"
                     /translation="SHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFV
                     YNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSY
                     PILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGGNR
                     KYLIMPRYLYFPIYIKLNKYFYFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAYAEN
                     GNSHPDDYQNSATYESQAYEHILTEAYGGKKEIKTHEFWIFFKQILEAMIIKYHITTY
                     NCTEGGARIEGTIEKPFLWACENLLDKNLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS
                     IEHCRDFSKILSNDFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEI
                     LSPLLIQFELKLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYG"
BASE COUNT          495 a          165 c          194 g          462 t
ORIGIN      
        1 gagtcattat tatgaaagat ttcatgaaga tattttagga ttgaataaaa aattagcaga
       61 aaattttaaa aattctattg tttctcatgg caatgatccc cttgatgctc ttcaaggcat
      121 agaacaattt gtttataatc ttcctcaaat gattacccat cctagttata aagaattact
      181 ttctaaaaga aagggtataa gtgatacagc tatcattgtt tctacaggac catctcttac
      241 taaacaactt cctttgttaa aaaagtatgc tagtaaagct acgatttttt gtgcggattc
      301 ttcttatcct attttagcta aacatggtat aaaacctgat tatgtttgta tgctagaaag
      361 aactgaaatt actgctgaat ttttcaatca tgattttgga gaatttgata aggatattgt
      421 atttatttgt gctggtgttg ttcatccaaa agcgattgaa tatttaaagg gtggaaatag
      481 aaaatatctt atcatgccaa gatatttata ttttccaatc tatataaagc ttaataaata
      541 tttttacttt ttatataaca cacctagcgt tgcacatatg tcatattttc tttcggttct
      601 actcaatcat aaaaatatta ttctcatagg tcaagattta gcttatgctg aaaatggcaa
      661 ttctcatcct gatgattatc aaaactcagc cacctatgaa agtcaagcgt atgaacatat
      721 tttaactgag gcttatggtg ggaaaaaaga aattaaaact catgaatttt ggatattttt
      781 taaacaaatc ctagaagcaa tgattattaa gtatcacatc accacctaca actgtaccga
      841 aggtggagca aggatagaag gaaccataga aaaacctttt ttatgggctt gtgagaattt
      901 acttgataaa aatttaaata aaccttttga aaaattagaa cctttaagtt taaataaaca
      961 aaatgagttt ttacttaagg cttattataa agtttgtaaa agtattgaac attgtagaga
     1021 ttttagtaaa atactcagca atgattttga aaaaatacaa agtgtatatt tgagtttaaa
     1081 tgaaaaagaa gaatatttaa atttagctat tgaaaaaata gatgagttta aaaataaact
     1141 tgaagatata aaacaaatgc aagatttata tgaaatttta agtcctttgc taatccaatt
     1201 tgaacttaaa cttgctagaa tttatgtttt aaatcctaaa accaaagaag atgcttttaa
     1261 taaaagtatt ctttggataa aagaacattt agaatttatg gaattagttt atggac
//
LOCUS       DAQUWA010000158         1290 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.158, whole genome shotgun sequence.
ACCESSION   DAQUWA010000158 DAQUWA010000000
VERSION     DAQUWA010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.158"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>1290
                     /locus_tag="R8X70_001936"
     CDS             <1..>1290
                     /locus_tag="R8X70_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="conjugal transfer protein TraN"
                     /protein_id="HEF2929678.1"
                     /translation="NSGCIYDDSRFKTVKGNPLTYKNWAQTQPDNLLKKYDIVDGKER
                     VSPLGEHWVAMASPSGQWSDQGNHFGDTNNPVRNYALLEFDKIPDCAGGGSDGGDNGH
                     TATDAMQCNTNFSDDPNFKPANGQGQSIACLQNSQQKYFCPAQLTQCVNSDDAVDGSS
                     KKIEGGVLKTGKTKVRLTFSKSIGYNAWQVVTNDIYITDIDAIDSFKLVYAGADDWVV
                     PFAPNSTVAVVGNKPNNTKDALDYIPYRPNNDNYGELSKFSGKNLNIELKQYLHTGIN
                     KSVAFFATVGSGGWQLTYEATGKDISCSNFGRNLNCTEESETIPFSAYKYTCPAGYQP
                     KEQGGVCSPQSVDDLIDTNGDGIGDSCNSSIAPAKNCLGVTRTCPFNSSRECVLIDNK
                     YQCSPFPCFKGVSDVENTDTPVGVNDANNNGWNDDGT"
BASE COUNT          441 a          188 c          272 g          389 t
ORIGIN      
        1 taattcaggt tgtatttatg atgatagtcg ttttaaaaca gtcaaaggta atccattaac
       61 ttataaaaat tgggcgcaaa ctcagcctga taatttacta aaaaaatatg atatcgtgga
      121 tggaaaagag agagtatctc ctttagggga gcattgggtt gctatggcta gccctagcgg
      181 acaatggagt gatcaaggca atcattttgg agatacaaat aatcctgtga gaaattacgc
      241 tcttttagag tttgacaaaa tacctgattg tgcaggtggt ggtagcgatg gtggtgataa
      301 tgggcacact gcaacagatg ctatgcaatg caatacaaat tttagcgatg atccaaactt
      361 caaacctgca aatggacaag gacaatccat agcttgttta caaaactctc agcaaaaata
      421 cttttgtcct gcacaattaa cacaatgtgt taattcagat gatgcagtag atggtagtag
      481 taaaaaaata gaaggtggtg ttttaaaaac aggtaaaaca aaagtaagac tcactttttc
      541 caaaagtata ggttataatg cgtggcaagt cgtgacaaat gatatctata ttactgatat
      601 tgatgcaatt gatagtttta aacttgttta tgcaggagct gatgattggg tggttccttt
      661 tgctccaaat tctacagttg ccgttgttgg taataagcca aataatacta aagatgcact
      721 agattacatt ccttatcgcc caaacaatga taactatggt gagctttcaa aatttagcgg
      781 aaaaaactta aacatagaat taaaacaata tttgcacaca ggtattaata agtctgtagc
      841 attttttgcc acagtaggaa gcggtggctg gcagctcact tatgaagcaa caggaaaaga
      901 tataagttgt agtaattttg gaagaaattt aaattgtaca gaagaaagcg aaacaattcc
      961 ttttagtgct tataaatata cttgtcctgc aggttatcag cctaaagagc aaggtggagt
     1021 gtgttcacca caaagtgtag atgatttgat tgatacaaat ggagatggta taggtgatag
     1081 ttgtaattct tctattgctc ctgctaaaaa ctgcttaggt gtaacaagaa cttgtccttt
     1141 caatagtagt agagagtgtg tgctaataga caacaaatat caatgctctc cttttccttg
     1201 ttttaaagga gtaagcgatg tagaaaatac tgatactcct gttggtgtta atgatgcaaa
     1261 caataatggt tggaatgatg atggtacttg
//
LOCUS       DAQUWA010000159         1289 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.159, whole genome shotgun sequence.
ACCESSION   DAQUWA010000159 DAQUWA010000000
VERSION     DAQUWA010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.159"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            161..1192
                     /gene="pseI"
                     /locus_tag="R8X70_001937"
     CDS             161..1192
                     /gene="pseI"
                     /locus_tag="R8X70_001937"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HEF2929679.1"
                     /translation="MQIGNFNTDKKVFIIAELSANHAGSLEMALQSIKAAKEAGADAI
                     KIQTYTPDSMTLNSNKEDFIIKGGLWDKRKLYELYESAKTPYEWHSQIFETAQNEGIL
                     CFSSPFAKEDLEFLKRFDPIAYKIASFEANDENFVRLIAKEKKPTIVSTGIATEEELF
                     KICEIFKEEKNPDLIFLKCTSAYPTAIEDMNLKGIASLKEKFNVEVGLSDHSFGFLAP
                     VMAVALGARVIEKHFMLDKSIESEDSKFSLDFDEFKAMVDAVRQAENALGDGKLDLDE
                     KALKNRVFARSLYASKDIKKGEMFSEENVKSVRPSFGLHPKFYQELLGKKATKDIEFG
                     DALKQGDFQ"
BASE COUNT          506 a          179 c          222 g          382 t
ORIGIN      
        1 tgaattctat aatttaaatc catatggcat tttttgaatg aaaccaagca aaatcataac
       61 aaagtcgtaa tatttatata atataaatat ataaattgaa gaaatatata atataattat
      121 atatcatttt agtcaggaaa tttaccaaag aaagaaaagt atgcaaatag gaaattttaa
      181 caccgataaa aaggttttta tcatagcaga acttagtgca aatcacgcag gaagtcttga
      241 gatggcactt caaagtataa aagctgccaa agaagcaggt gctgatgcga taaaaattca
      301 aacttacact ccagatagca tgactctaaa tagcaacaaa gaagatttta ttattaaggg
      361 tgggctttgg gataaaagaa aactttatga gctttacgaa agcgcaaaaa ctccttatga
      421 atggcattct caaatctttg aaaccgcaca aaatgaaggc atactttgtt tttcaagtcc
      481 ttttgccaaa gaagatttag aatttctaaa acgctttgat cctatagcct ataaaatcgc
      541 ttcttttgaa gctaatgatg aaaatttcgt gcgtttaatc gccaaagaaa aaaaacctac
      601 tatcgtttca acgggcattg ctacagaaga agaacttttt aaaatctgtg aaatttttaa
      661 agaagaaaaa aatcctgatt taatcttttt aaaatgcact tcggcttatc ctactgccat
      721 agaagatatg aatttaaaag gcatagcaag tttaaaagaa aaatttaatg ttgaagtggg
      781 actaagtgat catagctttg gttttttagc ccctgttatg gcagtagcac ttggagctag
      841 agtgatagaa aagcatttta tgttagataa aagcatagaa agtgaagaca gtaaatttag
      901 tcttgatttt gatgaattta aagctatggt agatgcagta agacaagctg aaaatgcttt
      961 aggcgatggt aagttagatc tagatgaaaa ggcgcttaaa aaccgtgttt ttgcaagaag
     1021 cttatatgca agtaaggata tcaaaaaagg tgaaatgttc agcgaagaaa atgtaaaatc
     1081 cgtgcgtcct tcttttggac tacatcctaa attttatcaa gaacttttag gaaaaaaagc
     1141 cactaaagat atagaatttg gcgatgcttt aaaacaagga gatttccaat gaccttcacc
     1201 cctactcaaa aagaactctt taacaaaaac attgaggctt taagtaatat tcttttaaaa
     1261 gaaagtttaa aagaaattaa atcaagtaa
//
LOCUS       DAQUWA010000160         1280 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.160, whole genome shotgun sequence.
ACCESSION   DAQUWA010000160 DAQUWA010000000
VERSION     DAQUWA010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.160"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            5..1279
                     /locus_tag="R8X70_001938"
     CDS             5..1279
                     /locus_tag="R8X70_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEF2929680.1"
                     /translation="MCLQISDLKKEIILKKGTLHFDFTASALALKCVEKEIAKILPSY
                     ANTHSDSSLNSFKTQQIYEQARKDIKTSLDLSDEFALIACGSGSSSAIKKFQELLGIY
                     IPPLIKEKYFDKVDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKKGNIDFEIL
                     EKVLKENQYRKIIASFSLASNVTGILSDYKRISKLVRKFKGIVAFDASSFIPYKNIAC
                     KYYDALFISSHKLIGGIGGSGLLAIKKELCGSKPSFAAGGTVGYVSRTSQCYLCNEEA
                     LEEGGTPGILQLIRASLAFKIKDEIGIEEIEKKEEILKEYFFEKLKIIPHLILYANNI
                     KTRLPIFAFNIKNISPFDLAYELSKKYHIETRAGCACAGPYGHDLLGLKDNEELKTKP
                     GWLRISLHYTHEKEDIDYFFEALQKSIAKLKF"
BASE COUNT          463 a          203 c          220 g          394 t
ORIGIN      
        1 aggattgtgc ttgcaaattt cagatttaaa aaaagaaata attttaaaaa aaggcacctt
       61 gcattttgac tttacagcta gtgctttagc gctaaaatgc gtggaaaaag aaattgctaa
      121 aatactacca agctatgcca atactcattc tgatagctct ttaaactctt ttaaaactca
      181 acaaatttat gaacaagcac gcaaagatat caaaacaagc cttgatttaa gcgatgaatt
      241 tgcacttatt gcttgtggat caggctctag cagcgccatt aaaaaatttc aagaattgct
      301 tggaatttac atcccgccac ttatcaaaga aaagtatttt gataaagtgg ataaaaacac
      361 cctaccctta gttatcgtag ggccttacga acatcattct aacgagcttt cttttcgcga
      421 aggtttgtgt gaatgcataa gaattcccct agataaaaaa ggaaatatag actttgaaat
      481 cttagaaaaa gttttaaaag aaaatcaata cagaaaaatc attgctagtt tttccctcgc
      541 ttcaaatgtt acaggtatat taagtgatta taaacgcatt tctaagttag tgcgtaaatt
      601 taaaggcata gtcgcttttg atgcgtcaag ctttatccct tataaaaata tagcctgcaa
      661 gtattatgat gctttattta taagctctca taaattaatc ggcggcatag gaggttctgg
      721 tcttttagca attaaaaaag aactttgcgg aagtaaacct agttttgccg caggagggac
      781 tgtaggctat gtttcgcgta cctctcaatg ctatctttgc aatgaagagg ctttagaaga
      841 aggagggact cctggaattt tacaactcat tcgtgcgagc ttagctttta aaataaagga
      901 tgaaataggc atagaagaaa tagaaaaaaa agaagaaatt ttaaaagaat acttctttga
      961 aaaactaaaa ataatacctc atttaatcct atatgctaat aatataaaaa ctcgcttacc
     1021 tatctttgct tttaatatta aaaatatttc tccttttgac ttagcctatg aactgagtaa
     1081 aaaataccac atagaaacac gtgcgggatg tgcttgcgct ggtccttatg ggcatgattt
     1141 attgggctta aaggacaatg aggaattaaa aactaaaccg ggttggctaa gaattagttt
     1201 gcattatact catgaaaaag aagatattga ttatttcttt gaagcactgc aaaaaagtat
     1261 cgctaaatta aaattttaaa
//
LOCUS       DAQUWA010000161         1253 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.161, whole genome shotgun sequence.
ACCESSION   DAQUWA010000161 DAQUWA010000000
VERSION     DAQUWA010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.161"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(76..151)
                     /locus_tag="R8X70_001939"
     tRNA            complement(76..151)
                     /locus_tag="R8X70_001939"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(116..118),aa:Arg,seq:tct)
     gene            complement(165..240)
                     /locus_tag="R8X70_001940"
     tRNA            complement(165..240)
                     /locus_tag="R8X70_001940"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(205..207),aa:Lys,seq:ttt)
     gene            complement(244..320)
                     /locus_tag="R8X70_001941"
     tRNA            complement(244..320)
                     /locus_tag="R8X70_001941"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(284..286),aa:Asp,seq:gtc)
     gene            complement(342..417)
                     /locus_tag="R8X70_001942"
     tRNA            complement(342..417)
                     /locus_tag="R8X70_001942"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(382..384),aa:Val,seq:tac)
     gene            complement(430..505)
                     /locus_tag="R8X70_001943"
     tRNA            complement(430..505)
                     /locus_tag="R8X70_001943"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(470..472),aa:Lys,seq:ttt)
     gene            complement(567..1226)
                     /locus_tag="R8X70_001944"
     CDS             complement(567..1226)
                     /locus_tag="R8X70_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEF2929681.1"
                     /translation="MSAYHFNFVSLLEYKNKIIYGFFQTLSVSFFALICSIFLGIVIC
                     FFSLSKIIILRFFATLYVELIRGTPLLVQVLLVFYIIANSLGFDDRYIVGIFILSMFS
                     AAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIKNILAPISGQLANLI
                     KDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILTLPIGVFSRYLERKYQ
                     K"
BASE COUNT          445 a          247 c          232 g          329 t
ORIGIN      
        1 ctataagact cgaacttatg acatccacct tgtaagggtg gcgctctacc aactgagcta
       61 agcgacctta atttttggcg acccctagag gatttgaacc tctgtttcca cacagagaga
      121 gtgttgtcct gggccactag acgaaagggt ctaaacccga taagtggtgt cccgtgttgg
      181 attcgaacca acggccccct ccttaaaagg gagatgctct accggctgag ctaacgagac
      241 atatggcgca gcggacgggg ctcgaacccg cgacctccgc cgtgacaggg cggcattcta
      301 accagctgaa ctaccgctgc acctaagaag taataattta atggtggtca ctataagact
      361 cgaacttatg acatccacct tgtaagggtg gcgctctacc aactgagcta agcgacctta
      421 aaaaataaat ggtgtcccgt gttggattcg aaccaacggc cccctcctta aaagggagat
      481 gctctaccgg ctgagctaac gagacatttt ttaaatgaaa atgtgattat gccaaaatat
      541 atatcgattt gtcaaggaaa tttagcttat ttttgatatt ttctttctaa atagcgtgaa
      601 aatacaccta taggtaaggt taagataaga tatgcaaaag ctaaaacgat atatccttcc
      661 aaggttgcaa agatatatga attcacttct tgtatacttt gggtaagctc attaagtgca
      721 atcacgctta ataaagaact gtctttgata aggttagcaa gttgcccact aataggagct
      781 aaaatatttt taatagcttg aggaaaaatg atgtataaaa aaatttgcct ttcgctaagt
      841 cctaaagccc tagcgctttc tatttgaatg ataggtacac ttaaaatccc tgctctaaaa
      901 atttcagata aataagctgc tgaaaacatg gaaaggataa atatccctac gatgtagcga
      961 tcatcaaatc ctaagctatt tgcaatgata taaaaaacta aaagcacttg cacaagcaag
     1021 ggggttcctc gtataagctc cacatataaa gtagcaaaaa atctcaaaat aataatctta
     1081 cttaaagaaa aaaagcaaat tacaatcccc aaaaatatac tgcatattaa agcaaaaaaa
     1141 ctaacagata gggtttgaaa aaaaccatag ataattttat ttttatattc tagtaaagaa
     1201 acaaaattga aatgataagc actcacacta aagctaaaat aaaaaaataa gct
//
LOCUS       DAQUWA010000162         1233 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.162, whole genome shotgun sequence.
ACCESSION   DAQUWA010000162 DAQUWA010000000
VERSION     DAQUWA010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.162"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            55..522
                     /locus_tag="R8X70_001945"
     CDS             55..522
                     /locus_tag="R8X70_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929682.1"
                     /translation="MPKTDTKPNAKNRIYKAIETWFTKIYLNKIIHNAKDTSIFINKS
                     SCLAFILSIYGKTDENKSKMTPAVIAHINTTKNTFTAKLKRVKNHESIIDLQAKYPKL
                     DIVSAYQFLTLKDKFKITKSEIQDFETLIDILSKNAQKSKNNPKTIKTLKKSF"
BASE COUNT          530 a          238 c          114 g          351 t
ORIGIN      
        1 tttaataaaa atacggtata attccacaaa actaccaaat acataggagc atttatgcct
       61 aagacagata caaaaccaaa cgcaaaaaat cgaatataca aagctataga aacttggttt
      121 accaaaatat acctaaacaa aataattcac aacgccaaag acactagcat ctttatcaac
      181 aaaagcagtt gcctagcatt catactctca atctatggca aaacagatga aaacaaaagc
      241 aaaatgacac ctgctgttat tgctcatatt aacaccacta aaaacacttt caccgccaaa
      301 ctaaaaagag ttaaaaacca tgagagcatt atcgatttac aagccaaata cccaaagctt
      361 gatatagttt cagcctatca gtttctaaca ctcaaagaca aattcaaaat caccaaatca
      421 gaaatccaag attttgaaac actaatcgat attctttcaa aaaacgccca aaaatcaaaa
      481 aataacccta aaacgataaa aacattaaaa aaatcatttt agccttttaa aggctaattc
      541 tgtcatttta aaccctatat ccattcaaga cacccactcg caatcaaaaa aacacaaaaa
      601 aacctacaaa aatcgcaaca caaaacaaaa accacagccc atttcaaaac tgcaaagcat
      661 ttttgaaaat tcgcaagaac ttctaaaata agccctagct ctcatattat cgctataaat
      721 caagcacaat caaaaataca cgccatgaag aaaattttgc agtttttagc tctaaagtct
      781 atttttgcca aaaatcttac tcaataactc gattatcaat aatgcttaaa aacctacaaa
      841 atagatattt taaaagcttt ttacaaatcg caaaatgtcg gtaaaacatt agcataattt
      901 gcctacaaca ataagcttta aacgcctata tttaggctat attattgcat tatgtccatt
      961 ggctcaactt tttacatttt ttcaaaaaag caaaagagcc taaaaataag ggttttagta
     1021 taataagccc tgaatattga tattttattt ttttattaca ctttttagta tatttttttc
     1081 aacaataaaa attaaattaa tattaaaaac cctataaaat agtattttaa ataaactctt
     1141 ttttgtagtt aagttgtaat aaagttgcac tcaagttata gtaaaaataa cattaactac
     1201 atattaacta cacttttact tcaaaaaaca tgc
//
LOCUS       DAQUWA010000163         1226 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.163, whole genome shotgun sequence.
ACCESSION   DAQUWA010000163 DAQUWA010000000
VERSION     DAQUWA010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.163"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            257..>1226
                     /locus_tag="R8X70_001946"
     CDS             257..>1226
                     /locus_tag="R8X70_001946"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929683.1"
                     /translation="MKNIVLLGGSNSVLTNGLKNGLQCEESIVLKNYALGACTCLQNL
                     YALILNKNDILDADLLVTESNVNEIHSFCRIKMPLKQLSYIINTYYEELSFLNIKILV
                     LILPICEKHPSNEDIEIINDLHRKNCVKYGFNCIDMQSYYKKNNVFEFFMDLPENYHP
                     METIMNKLGRNIAKNIDAFKYHLQNKNKLHRKYAFFIPEVDTIGNKLETKIKSNSLYR
                     ETIVRITDKAKILFPSKFQGYRVAAIYTWNDFEEECYGTKVFSSLVLENLQTKIVKPS
                     NGWMQFSELHQDFNIDCSTFAYFNSQNTQITENSILIHGRELMLKHV"
BASE COUNT          492 a          111 c          188 g          435 t
ORIGIN      
        1 tctataataa agtttcaact tttgcaaaaa taactattgt tattaaaata agaatatttt
       61 tataaaattg cagaaggaga atttctatca agaaaaatat gatagaataa tctcatgttt
      121 tttggtatta ttggatgtaa tttagtgctc aaaaaatgta taaaagaata ttttgaaatt
      181 tgtatagaga ttattgaaag ggttttaaat ttaagaaatc taattaaaat aaaaatttat
      241 ctagaggaag aagaaaatga aaaatattgt acttctagga ggaagcaatt ctgttttaac
      301 aaatggatta aaaaatggat tacagtgtga agaaagtata gtgttgaaaa attatgcgtt
      361 aggtgcttgt acttgtcttc aaaatttata tgcgttaatt ttgaataaaa atgatatatt
      421 agatgccgat ttgttggtta cagaatcaaa tgtaaatgag attcatagtt tttgcaggat
      481 aaaaatgcca ttaaaacaac ttagctatat aataaataca tattatgaag aattaagttt
      541 tttgaatatt aaaattttag tattaatctt acctatttgt gagaaacatc catcaaatga
      601 ggatattgaa attattaatg atttacatag aaaaaattgt gttaaatatg gatttaactg
      661 tattgatatg caaagttatt ataaaaaaaa taatgttttt gaatttttta tggatttacc
      721 tgaaaattat catcctatgg aaactatcat gaataagtta gggcgtaata tagctaagaa
      781 tatcgatgct tttaagtatc atttacagaa taaaaataaa cttcaccgaa aatatgcttt
      841 ttttattcca gaggttgata ctatagggaa taagttagaa actaaaataa aatcaaattc
      901 tttatatcgc gaaacaattg ttagaataac agataaagct aaaattttat ttccatctaa
      961 atttcaaggt tatcgagtag ctgcaattta tacatggaat gattttgaag aagagtgtta
     1021 cggtactaaa gtattttcaa gtttagttct tgaaaattta caaactaaga tagtgaaacc
     1081 aagcaatgga tggatgcaat ttagtgaatt acatcaagat tttaatatcg attgttctac
     1141 atttgcctat tttaattcac aaaatactca gattactgaa aatagtattt taatacatgg
     1201 gagagaactt atgttgaaac acgtag
//
LOCUS       DAQUWA010000164         1201 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.164, whole genome shotgun sequence.
ACCESSION   DAQUWA010000164 DAQUWA010000000
VERSION     DAQUWA010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.164"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            487..819
                     /locus_tag="R8X70_001947"
                     /pseudo
     CDS             487..819
                     /locus_tag="R8X70_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661054.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            823..>1201
                     /locus_tag="R8X70_001948"
     CDS             823..>1201
                     /locus_tag="R8X70_001948"
                     /inference="COORDINATES: protein motif:HMM:NF020514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1919 domain-containing protein"
                     /protein_id="HEF2929684.1"
                     /translation="MISIFSNNCIAGFLYCDYKIKFLSPTINLQLTPVDFIKMCSHLD
                     YYLSLEIKEIKVDDKVLSKFKDVGGGNNINFPVGMLGDLMIFFQHYKNINEAIEKWNY
                     RKNRIVKKKYIIMNYINYEAYPCH"
BASE COUNT          516 a          157 c          163 g          365 t
ORIGIN      
        1 aatgaatggg taagacaaga gttctttcct cataaagaaa gattgtttcc taagaaagat
       61 ttaagtaatt ataaagaaaa ttatgaactt aaagaaatga aaccagaata ttgggataaa
      121 atagctgaat ttatagcgga tatcgtttca actaaaaacc aaaatatcgc agataaaact
      181 attattattc aaaataaaga caaggttatt gttaatcaaa ccaatcaaat aaattcttta
      241 caaacaactt taaaggataa caaagcacac ttaatccaag ctcaaaacct aaacaatact
      301 cttaataaaa ctatacaaga aaaagatatt atcataaatt ctaatacaaa ccaaatcgat
      361 caattgcaaa acaatataaa agagaaaata aaacaacttc atattttgca aaacagtata
      421 caagaaaaat caacccaact taaccaactt caatctaaat tatctttcca aacccaatac
      481 ggcacagcca aatcccgcat tcaaaaccaa ctctcctata aactaggtca agctatgata
      541 gtaaattcta aatctttctt aggttgtata agaatgcctt ttgtattatc ttatataaaa
      601 gataagcaca aacaagaaca aaaaaactac caagaaaaaa taaaaaaaga tccttcttta
      661 aaattaccac cattagaatc ttatcctgat tatcaagaag ctttaaaaga aaaagaatgt
      721 tttacttata aactaggaga ggcccttata aaagcaagta ataattggta tggcgggggg
      781 gggtatatca aattgtggtt tgagatgagg aagatttaaa ggatgatatc aatattttct
      841 aataattgta ttgcaggttt tttatattgt gattataaga taaaatttct gagtccaaca
      901 attaatttgc aattaactcc agtggatttt ataaaaatgt gttcccattt agattattat
      961 ttgtctttag agattaaaga aattaaagtt gatgataagg ttttatctaa atttaaagat
     1021 gtgggtgggg gtaataatat taattttcct gtaggaatgc ttggagattt gatgattttt
     1081 tttcagcatt acaaaaacat aaatgaagca atagaaaaat ggaattatag aaaaaataga
     1141 attgttaaaa aaaaatatat aattatgaat tatattaatt atgaggctta tccttgccat
     1201 a
//
LOCUS       DAQUWA010000165         1192 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.165, whole genome shotgun sequence.
ACCESSION   DAQUWA010000165 DAQUWA010000000
VERSION     DAQUWA010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.165"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..1035
                     /locus_tag="R8X70_001949"
     CDS             <1..1035
                     /locus_tag="R8X70_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEF2929685.1"
                     /translation="FEKSFLFWLAKYVKFKLNSLSNKELKNPKALAEVNFALTRGVKN
                     IEELDALAKKARNAGLNGVNTYFNPLKKVFEYLNFYKLHSLKQIDEELIVEVLASITG
                     ALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFNIVLKNWGGITGSKGAKLPEFMNE
                     DELKKFLEAIENSDFKNNTIRNKLIIKIIIFTGIRVSEAINIKLKDISEENELYIIRI
                     RAKGNKYRVVMIKKELIEHLLKDVRVNYLSEDGLLFVNRNGKALTQAYVSRIVEQILF
                     RAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYTHFDNDKLKLA
                     AQVAKELSER"
     gene            1025..>1192
                     /locus_tag="R8X70_001950"
     CDS             1025..>1192
                     /locus_tag="R8X70_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002802099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929686.1"
                     /translation="MSAETKFAIFGKYFYYDLKFVLKAYNKKQSKKYFKFVQKHKDKY
                     YFLTLVDYEFYK"
BASE COUNT          459 a          156 c          201 g          376 t
ORIGIN      
        1 tttgaaaagt cttttttatt ttggcttgca aaatatgtta aatttaaact caactctctt
       61 tccaataaag aacttaaaaa tccaaaagcc ctagcagagg ttaattttgc acttacaagg
      121 ggtgttaaaa atatagaaga gcttgatgcc ttggctaaaa aagcaagaaa tgcgggttta
      181 aatggggtta atacttattt taatccctta aaaaaagttt ttgaatatct taatttttat
      241 aaattacact ccttaaagca aatcgatgaa gagcttatag tggaggtttt agcaagtatt
      301 actggagctt tatcggatgc gagtaaaaaa aactaccgta ttgcagtgat taattttttt
      361 gattttttag ataaacaaaa cgaagaggat gaaaaggcgc atatttttaa tattgtactt
      421 aaaaattggg gaggtattac aggaagcaag ggagcaaaac tgcctgaatt catgaacgaa
      481 gatgagttaa aaaaattcct tgaagccata gaaaattcag attttaaaaa caataccata
      541 cgcaacaagc ttattataaa aatcatcatt tttacaggaa ttcgtgtaag tgaggctatc
      601 aatatcaaac tcaaggatat tagcgaagaa aacgaacttt acattataag aattcgcgcc
      661 aaaggaaata aataccgcgt tgtgatgata aaaaaagaat taatcgagca tttgttaaag
      721 gatgtaagag ttaattattt aagtgaagat ggcttacttt ttgtcaatcg caatggaaaa
      781 gctttaacac aagcttatgt aagtcgtatt gtagagcaaa ttttatttcg cgcaggaatt
      841 cgcaagcaaa aaaacggcgc tcatatgctt cgccatactt ttgctaccct actctataaa
      901 aaacaaaaag atttggtttt ggtgcaagaa gctttaggtc atgcaagttt aaatacttca
      961 agaatttata cacattttga caatgataaa ttaaagcttg ctgcacaagt agcaaaggaa
     1021 ttaagtgagc gctgaaacaa aatttgccat ttttggtaaa tatttttatt atgacttaaa
     1081 atttgttctt aaagcctata ataaaaaaca aagtaaaaaa tactttaaat ttgtgcaaaa
     1141 acataaagat aaatattatt ttttaactct tgtggattat gaattttata aa
//
LOCUS       DAQUWA010000166         1094 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.166, whole genome shotgun sequence.
ACCESSION   DAQUWA010000166 DAQUWA010000000
VERSION     DAQUWA010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.166"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..685
                     /locus_tag="R8X70_001951"
     CDS             <1..685
                     /locus_tag="R8X70_001951"
                     /inference="COORDINATES: protein motif:HMM:NF024835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEF2929687.1"
                     /translation="ENIKFLRKQHKLTQQELGEILNVGQKTVSMWEKGYNNITLPIIL
                     KICEHFQISPNELLANNLADVEFHRNLRNYNRLTHELQIKNGLNDFLKSNIVNMQLQK
                     ISKHIRSLKGVGFIEKLSESWNGNGEKMLLILLLFIKHLNKIELSHTTMSKKDFISML
                     KKFKISLKNIKLYSLVLSEKDKRNIIEWAEKNLDEIDVNALFVDLRKDVEKIIINELN
                     SFNYLIFKD"
BASE COUNT          437 a          132 c          155 g          370 t
ORIGIN      
        1 agaaaatatt aagtttttaa gaaaacaaca taaattgaca caacaagagt tgggagaaat
       61 tttaaacgta ggacaaaaaa cagtaagtat gtgggaaaaa gggtataaca acattacact
      121 tcctataata ctaaaaatat gtgagcattt tcaaattagt ccaaatgagc tactagcaaa
      181 taatttagcg gatgtggaat ttcatagaaa tcttagaaat tacaatagac ttacacatga
      241 attacagata aaaaatggct taaatgattt tttaaaatca aacattgtaa atatgcagct
      301 tcaaaaaata tctaaacata ttcgttctct caaaggcgta ggatttatag agaaattaag
      361 cgaaagctgg aatggaaacg gagagaaaat gcttttaatt cttctcttgt ttatcaagca
      421 cttaaacaag atagaattaa gtcacacaac aatgagtaaa aaagatttta taagcatgtt
      481 aaagaagttt aaaatttctc taaaaaatat caaattatac tctttagttt taagtgaaaa
      541 agacaaaaga aatattatag aatgggcaga aaaaaactta gatgagatcg atgtaaatgc
      601 tttatttgtt gatttaagaa aagatgttga aaaaataatt ataaatgagc ttaattcgtt
      661 taattattta atttttaagg attaaaacag ataatattta ctggttgcta tttaccaact
      721 aaaattttgc aacagaatat aaaatcattc tgcataaaga tttgttggtt tttaaaataa
      781 ctatttttgt tattctttga attttttata ttatattttg gctgttttat ttatgtaatt
      841 ttacataaat aaaaagtttt tccaatttta caacaaaatc ctttatgcta tgagtaaaaa
      901 ataagtctag ctttttagct aggcttagtg atctcgtata gcaccgaata tataatcaaa
      961 tttataactc atgcaatttt acttgtcgga atgcaaagct tcgccatcta ttccatgtat
     1021 actcatagaa tatcctgtag cgtaaccgtc taaaaattca gagaagtgtg tgttattatc
     1081 acttctatat cccc
//
LOCUS       DAQUWA010000167         1083 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.167, whole genome shotgun sequence.
ACCESSION   DAQUWA010000167 DAQUWA010000000
VERSION     DAQUWA010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.167"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            98..>1083
                     /locus_tag="R8X70_001952"
     CDS             98..>1083
                     /locus_tag="R8X70_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015016418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HEF2929688.1"
                     /translation="MNNIKIKLSVIANSIAIFALSILSIISFYFTKDSLYQSTLHTET
                     ELLKAAQISIEDFRSRNISLLNALEKDILNLPYEALNSQDNIINNAGAILKYYRNSGN
                     LLAVYIGLDNGENIVSDDLSEKKNTNITINGKANNYNATTREWYKEARNSNQTYITPA
                     YIDVVSNEYAITYSKALYKDGKFIGVLGFDVLLTSLQDKIARTPGNTFVFDHQDRIFT
                     ATNKALLDPSVDHSPVLNAYKAHGDNNFFSYKLNNEERLGVCTKVFAYTACITESTDV
                     INKPIFKAAYIQVIALIIMISISIILLYFIVSKYLSPLAAIQTGLTSFFDFI"
BASE COUNT          406 a          161 c          146 g          370 t
ORIGIN      
        1 taagataaaa ataaaaaatt tattttattt ttgtgataaa ataatagcca aattatttag
       61 ttttatgcta aaaataacaa aaattaaaag gaaaaacatg aataatatca aaataaaact
      121 ttctgttatt gcaaattcaa ttgcaatttt tgctttaagt attttgagca tcattagctt
      181 ttactttaca aaagattctt tgtatcaaag tacgcttcat actgaaacag aacttcttaa
      241 agcagcacaa atttctatag aggattttag atccagaaat atatctttgc ttaatgctct
      301 tgaaaaagat atattaaatt taccctatga agcactaaat tctcaagaca acataattaa
      361 taatgcagga gccatattaa aatactaccg caatagtgga aatttgcttg ctgtttatat
      421 tggtttagat aatggtgaaa atatcgtgag tgatgatcta agcgagaaaa aaaatactaa
      481 tataactata aatggaaaag ccaacaacta taatgcaact actagggaat ggtataaaga
      541 agctagaaat agtaatcaaa cgtatataac cccagcttat attgatgttg ttagtaatga
      601 atacgccatt acttactcta aagctcttta taaggatggt aaatttattg gtgttttagg
      661 atttgatgtt ttattaacta gtttacaaga taaaatcgct agaactccag gcaatacctt
      721 tgtttttgat catcaagata gaatttttac agccaccaac aaagctttat tagatccttc
      781 ggtagaccat tctcctgttt taaatgcata taaagctcat ggtgataaca acttcttctc
      841 ttataagtta aataatgaag aaagacttgg agtttgtact aaagtctttg cttatacagc
      901 ttgtattacc gagagtacag atgtaataaa taaacctata tttaaagcag catatataca
      961 agttatagcc ttaattatta tgatatctat tagcatcatc ctcctttatt tcatcgtatc
     1021 aaaatacctc tccccacttg cagctatcca aacaggttta acttcattct ttgatttcat
     1081 caa
//
LOCUS       DAQUWA010000168          967 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.168, whole genome shotgun sequence.
ACCESSION   DAQUWA010000168 DAQUWA010000000
VERSION     DAQUWA010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.168"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            50..>967
                     /locus_tag="R8X70_001953"
     CDS             50..>967
                     /locus_tag="R8X70_001953"
                     /inference="COORDINATES: protein motif:HMM:NF015210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HEF2929689.1"
                     /translation="MLKNITNFKELIEEYQIKIPIIQRDYAQGRIEASIIRDKFLDNI
                     LVHLNNNKEMCLDFIYGSVKNDVFLPLDGQQRLTTIFLLYWYSGKKEDKEIDFLKKFT
                     YETRASSREFCQKLIQEEFNTFEDSDKLSEKIKNSSWFLYFWDNDPTIKSMLAMIDDI
                     HKKFNNEEFFDKLELLKFHFIKLENFNLDDDLYIKMNARGKKLTDFEIFKAEFEKFLI
                     SNKKNLFKEYFIKNIDGEWTDLFWRLGFKNKHYLIDDAFMNFFYFISEMLHVKNKEKT
                     TVIDFENMKKNISKLIENVYLNDENIDFFF"
BASE COUNT          405 a           80 c          145 g          337 t
ORIGIN      
        1 aagctattga agaaaaaatc aaagttttta taaaaaatgg agaataacaa tgcttaaaaa
       61 tattaccaat tttaaagaat taattgagga atatcaaatt aaaattccta ttatacagag
      121 agattatgca caaggaagaa ttgaggctag tattattagg gataaatttt tagacaatat
      181 tcttgtgcac ttgaacaaca acaaagaaat gtgtttagat tttatttatg gaagtgttaa
      241 aaatgatgtt tttttgccgc ttgatgggca acagagactg actactattt ttttacttta
      301 ttggtactcc ggaaaaaagg aagataaaga aatagatttt ttaaaaaaat ttacttatga
      361 aactagagct agctcaagag agttttgtca aaaattaata caagaagaat ttaatacttt
      421 tgaagatagt gataaattat ctgaaaaaat taaaaacagt agttggtttt tatatttttg
      481 ggataatgat cctactatta aatctatgct agcaatgata gatgatatac ataaaaaatt
      541 taacaacgaa gaattctttg ataaactaga attacttaaa tttcatttta ttaaactaga
      601 gaattttaat ttagatgatg atttgtatat aaaaatgaat gctagaggta aaaaattaac
      661 agattttgaa atttttaaag cagaatttga aaaatttcta attagtaata agaaaaatct
      721 cttcaaagag tattttataa aaaatattga tggcgagtgg acagatttgt tttggagatt
      781 aggttttaaa aataaacact atttgataga tgacgctttt atgaattttt tttattttat
      841 cagtgaaatg cttcatgtaa aaaataaaga aaaaacaaca gttattgatt ttgaaaatat
      901 gaaaaaaaac attagcaaac tgatcgaaaa tgtatattta aatgatgaaa atattgattt
      961 cttcttt
//
LOCUS       DAQUWA010000169          951 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.169, whole genome shotgun sequence.
ACCESSION   DAQUWA010000169 DAQUWA010000000
VERSION     DAQUWA010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.169"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..609
                     /locus_tag="R8X70_001954"
     CDS             <1..609
                     /locus_tag="R8X70_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEF2929690.1"
                     /translation="SFDMKKIRFRTENSEEKLNYLNENEIIRLNNVLEKEKAKKEVYN
                     SFRNSLLIKLMLYGGLRISEALNVKLCDFEEVDDEILKISIIGKGGKEQFAFIKKEEV
                     DDELEYFKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYAKALISKKGLHLLRHTLAM
                     KLTAKGTNLVVIQKILRHANLNTTTIYAKATNDTVKAALLNN"
     gene            complement(652..945)
                     /locus_tag="R8X70_001955"
     CDS             complement(652..945)
                     /locus_tag="R8X70_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929691.1"
                     /translation="MKTLIIHLNSYLEAENNLQKIKILVKIYQNLQKCSRTPDLIDIE
                     ELEFNKEDIFEELFYALGGLGGMYSVEMIQSRIANFIKILGGEPKLLLERFTA"
BASE COUNT          369 a          113 c          143 g          326 t
ORIGIN      
        1 tcctttgata tgaagaaaat tagatttaga acagaaaatt cagaagaaaa attgaattat
       61 cttaatgaaa atgaaattat aaggctaaat aatgttttag agaaagaaaa agcaaaaaaa
      121 gaagtttata atagttttag aaactctttg ctgataaaac ttatgcttta tggaggactt
      181 agaatttctg aagctttaaa tgtaaaactt tgtgattttg aagaggttga tgatgaaata
      241 ttaaaaatat ccataatagg caagggcggt aaagaacaat ttgcatttat taaaaaagaa
      301 gaagtagatg atgagcttga atattttaaa gaaaatatcc aagatagtga ttacataatg
      361 caaactagca caggaaaaca tttaaataga agtaatgctt ttttgattgt aaataatatt
      421 tacgctaaag ctttgatcag caaaaaagga cttcatttgc ttagacacac tttagccatg
      481 aaattaacag ctaaaggaac aaaccttgtg gtcatacaaa aaattctaag acatgcaaat
      541 ctaaatacta ctactatata tgccaaagca acaaatgata cagtaaaagc tgcgttattg
      601 aataattaat ttttctaaaa ttgattattt acatagactt ctttttgaag tctatgctgt
      661 gaatctttct aataaaagtt taggttctcc gccaagtatt ttgatgaaat ttgcaattct
      721 tgattgtatc atttctacgg aatacatacc tcctaaaccg cctaaagcat aaaataattc
      781 ttcgaaaatg tcttctttgt taaattcaag ttcttctata tcaataagat caggagttcg
      841 gctacatttt tgtaaatttt gatatatctt gactaaaatc ttgatttttt gtagattatt
      901 ttcagcctct aaataagaat ttaagtgtat tattagagtt tttatgagtt t
//
LOCUS       DAQUWA010000170          950 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.170, whole genome shotgun sequence.
ACCESSION   DAQUWA010000170 DAQUWA010000000
VERSION     DAQUWA010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.170"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            310..828
                     /locus_tag="R8X70_001956"
     CDS             310..828
                     /locus_tag="R8X70_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929692.1"
                     /translation="MAENYIAENNLGGTREQQVAAAAKGLENLAARGDLQGLLHYANM
                     NTAKPNADGIHDVSNKSYYSPSSVGANNAHNNDTVANQNSLNNLGTAGGNNIRNEFSQ
                     QSGATISNFKNQGTSTSNVVNNSAKDAIVEQNANRRMGVNPSSYAIQDASKSGNELAK
                     EAQGLFDAMSKK"
BASE COUNT          342 a          150 c          193 g          265 t
ORIGIN      
        1 cttaaagtct ttggaagtgg cggtgaagta ggtggtacgg ttagaggaac agcttcaata
       61 ggtacaagtt caaatgaaac acaagaatat tcaagaagct taagcaaaga aggacaggct
      121 gcatttgata aaatgtatgc tgaaaaactt ggcaatatca ttaaatctag tgatagtgtg
      181 gcttctgctt attctaatgc tctatccaca agcacaggga gtgaatttgc cgatgctaaa
      241 caaaaagcac attcttatag tgaagcaagt caatacagtg aagctattca aacaagtaat
      301 ttacctaata tggctgaaaa ttacattgct gaaaataatt tgggcggaac tagagaacaa
      361 caagttgctg ctgcagctaa agggttagaa aacttagccg caaggggaga tttgcaaggc
      421 ttgttgcact atgctaatat gaatacagct aaaccaaatg ccgatggaat tcatgatgtt
      481 agcaataaat cttattacag tccttcaagc gtaggggcta acaatgctca taataatgat
      541 acagtagcta atcaaaatag tttaaataac ttaggaacag cagggggaaa taatataaga
      601 aatgaattca gtcagcaaag tggagctact ataagtaatt tcaaaaatca aggaacaagc
      661 acttctaatg tggttaataa tagcgctaaa gatgccatag tagaacaaaa tgctaacagg
      721 agaatgggag taaatcctag ctcttatgca atacaagatg caagcaaatc aggcaatgag
      781 cttgcaaaag aagctcaagg cttgtttgat gctatgagta aaaaataagt ctagcttttt
      841 agctaggctt agttatctcg tatagcaccg aatatatgtt cgtatttaca atgtccgctt
      901 cttatatatt ctgcgatttt actttttctt ctatgctttt tctcatcata
//
LOCUS       DAQUWA010000171          949 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.171, whole genome shotgun sequence.
ACCESSION   DAQUWA010000171 DAQUWA010000000
VERSION     DAQUWA010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 949)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.171"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            310..828
                     /locus_tag="R8X70_001957"
     CDS             310..828
                     /locus_tag="R8X70_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929693.1"
                     /translation="MAENYIAENNLGGTREQQVAAAAKGLENLAARGDLQGLLHYANM
                     NTAKPNADGIHDVSNKSYYSPSSVGANNAHNNDAVANQNSLNNLGTAGGNNIRNEFSQ
                     QSGATISNFKNQGTSTSNVVNNSAKDAIVEQNANRRMGVNPSSYAIQDASKSSNELAK
                     EAQGLFDAMSKK"
BASE COUNT          346 a          154 c          193 g          256 t
ORIGIN      
        1 cttgaaatct ttggaagtgg cggaaaaata ggtggtgagg ttagaggaac agcttcaatg
       61 ggtacaagtt caaatgaaac acaagaatat tcaagaagct taagcaaaga aggacaggct
      121 gcatttgata aaatgtatgc tgaaaaactt ggcaatatca ttaaatctag tgatagtgtg
      181 gcttctgctt attctaatgc tctatccaca agcacaggca gtgaatttgc cgatgctaaa
      241 caaaaagcac attcttatag tgaagcaagt caatacagtg aagctattca aacaagtaat
      301 ttacctaata tggctgaaaa ttacattgct gaaaataatt tgggcggaac tagagaacaa
      361 caagttgctg ctgcagctaa agggctagaa aacttagccg caaggggaga tttgcaaggc
      421 ctgttgcatt atgctaatat gaatacagct aagccaaatg ctgatggaat tcatgatgtt
      481 agcaataaat cttattacag tccttcaagc gtaggggcta acaatgctca taataatgat
      541 gcagtagcta atcaaaatag tctaaataac ttaggaacag cagggggaaa taatataaga
      601 aatgaattca gtcagcaaag tggagctact ataagtaatt tcaaaaatca aggaacaagc
      661 acttctaatg tggttaataa tagcgctaaa gatgccatag tagaacaaaa tgctaacagg
      721 agaatgggag taaatcctag ctcttatgca atacaagatg caagcaaatc aagcaatgag
      781 cttgcaaaag aagctcaagg cttgtttgat gctatgagta aaaaataagt ctagcttttt
      841 agctaggctt agttatctcg tataccatgg aatatataat catatttacg aggatcgctt
      901 tctatatatc ctgcgatttc atactccttc ccatgctttt tctcatcat
//
LOCUS       DAQUWA010000172          930 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.172, whole genome shotgun sequence.
ACCESSION   DAQUWA010000172 DAQUWA010000000
VERSION     DAQUWA010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.172"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            55..486
                     /locus_tag="R8X70_001958"
     CDS             55..486
                     /locus_tag="R8X70_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929694.1"
                     /translation="MPKTDTKPNAKNRIYKAIETWFTKIYLNKIIHKEKNDKLFINIT
                     SCLAFILSIYGKTDENKSKMTPAVMAYIKKTKNTFIAKLKRVKNHESIIDLQAKYPKL
                     DIVSAYQFLTLKDKFKITKSEIQDFETLIDILSKNAQKSKK"
BASE COUNT          421 a          186 c           88 g          235 t
ORIGIN      
        1 tttaataaaa atacggtata attccacaaa actaccaaat acataggagc atttatgcct
       61 aagacagata caaaaccaaa cgcaaaaaat cgaatataca aagccataga aacttggttt
      121 accaaaatat acctaaacaa aataatccac aaagagaaaa acgacaaatt atttatcaat
      181 ataactagct gtctagcatt catactctca atctatggca aaacagatga aaacaaaagc
      241 aaaatgacac ctgctgttat ggcttatatc aaaaaaacaa aaaacacttt tattgccaaa
      301 ctaaaaagag ttaaaaacca tgagagcatt atcgatttac aagccaaata cccaaagctt
      361 gatatagttt cagcctatca gtttctaaca ctcaaagaca aattcaaaat caccaaatca
      421 gaaatccaag attttgaaac actaatcgat attctttcaa aaaacgccca aaaatcaaaa
      481 aaataaccct aaaacgataa aaaccattaa aaaaatcatt ttagcctttt aagggctaat
      541 tctgtcattt taaaccctat atccattcaa gatacccact tgcaatcaaa aaaacacaaa
      601 aaaacctaca aaaatcgcaa cacaaaacaa aaaccacagt ccatttcaaa actgcaaagc
      661 atttttgaaa attcgcaaga acttctaaaa taagccctag ctctcatatt atcgctataa
      721 atcaagcaca atcaaaaata cacgccatga agaaaatttt gtagttttta gctctaaagt
      781 ctatttttgc caaaaatctt acacaataac tcgattatca ataatgctta aaaacctaca
      841 aaatagatat tttaaaagct ttttacaaat cgcaaaatgt cggtaaaaat tagcataatt
      901 tgcctacaac aataagattt aaacgcctat
//
LOCUS       DAQUWA010000173          900 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.173, whole genome shotgun sequence.
ACCESSION   DAQUWA010000173 DAQUWA010000000
VERSION     DAQUWA010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.173"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            126..254
                     /locus_tag="R8X70_001959"
                     /pseudo
     CDS             126..254
                     /locus_tag="R8X70_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780196.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
     gene            complement(377..898)
                     /locus_tag="R8X70_001960"
     CDS             complement(377..898)
                     /locus_tag="R8X70_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEF2929695.1"
                     /translation="MGAFCSSSQKLGFVMTQNINLRQANYIVEIGPGTGVFTENILKY
                     KNKKAQFFAIEINKNIADKLKRKIVNLDIEIGSAENLPYFLRQRNITYADVIISGIPW
                     SLLRDHEQEKLLKIIHKSLKPNGYFSTFAYVLPTYSSLKFRQKIFSLFAEVRISKVVW
                     QNFPPAVVYYCKK"
BASE COUNT          317 a          135 c          123 g          325 t
ORIGIN      
        1 taccgaatgt aaatttatat catattctat ttgcatatcg atattttatc aaattatact
       61 aaatgtttgg taactttaaa tttaatcgga agcaattcat cttccgctta tagaagcgga
      121 agttttcttg cttggaaatt gataaattat taaagcaaaa cggatttgat atcttatctt
      181 ccatagaaga ttatatagaa gaaactacgg atgatcgaga attgctcatt attgctaaaa
      241 agaaagaatt ataatatagc tttatttaaa attatcaagc tttaatccaa aaattttaca
      301 atgcgtgctt atttttagga caatccgtgt aataaagcat taagttgtgt tttatcaaaa
      361 aaatggggat aaaaatttac ttcttacaat aatacaccac agcgggtggg aaattttgcc
      421 aaacaacttt tgaaattctc acctctgcaa aaagagaaaa tatcttttga cgaaatttta
      481 aacttgaata agtaggtagc acataagcaa aggtgctaaa atatccgtta ggttttaaac
      541 ttttatggat gatttttaaa agcttttctt gctcgtgatc cctaagcaaa ctccacggaa
      601 ttccacttat aatcacatct gcataggtga tatttctttg ccttaaaaaa taaggtaaat
      661 tttcagcact ccctatttct atatccaaat ttacaatttt tcttttaagc ttatctgcta
      721 tatttttatt gatttctata gcaaaaaatt gtgctttttt atttttatat tttaaaatat
      781 tttcagtaaa aacacctgtg ccaggtccaa tctctacgat atagtttgct tgacgcaaat
      841 taatattttg agtcataaca aaacctagct tttgagagct agaacaaaaa gcaccgattt
//
LOCUS       DAQUWA010000174          866 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.174, whole genome shotgun sequence.
ACCESSION   DAQUWA010000174 DAQUWA010000000
VERSION     DAQUWA010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.174"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(1..754)
                     /locus_tag="R8X70_001961"
                     /pseudo
     CDS             complement(1..754)
                     /locus_tag="R8X70_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344700.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            complement(767..>866)
                     /locus_tag="R8X70_001962"
     CDS             complement(767..>866)
                     /locus_tag="R8X70_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEF2929696.1"
                     /translation="KSFMQENSISYPCGNKVFTFKDVENQLKLIIN"
BASE COUNT          303 a          157 c           98 g          308 t
ORIGIN      
        1 tgtattaaaa tatgcgaact atttaaaaca taatcacaac caccctccat ttctcttcct
       61 aaaatataaa tcaaaggtgg aacagccgaa cctgaattat caatcacacc atccacatac
      121 caaggagcta tttttgctat aagcaaggct aagtatcctc cataagaccc cccccataaa
      181 tttttggtaa atctgcaaat tttggaaagc gtttaactaa atcttttaaa gcattgatat
      241 gatcaatagc tgccataatg ccaaaatttt gataatctcc attaggtggg ataaaatcac
      301 aagaaagtcc tattttttgg ctttcatcaa ccaaacctgc ttgtttaatt tctccagctc
      361 tttgctcgat aaaagggata atttgttcaa aattatcttc attagctagt aaatgtccca
      421 aattaatatt ttttaaaata ttattaatac gctccaaatc atctttgttt ggaataagtt
      481 ttggattata cttttgatca atactttgtc ttgcacaaaa acaatgataa aaaacatgca
      541 ctgctacaac atcaaaattt ttagcaatat aatttctata agagtctaaa aaatatatat
      601 ttgcattagc tccatagcct cctatcataa aaactatagc tttaatctct ttttcatcat
      661 cataacttat gcggtattca agtttactag ttcttttaat acctagttct acatcatcac
      721 aagaatcaat ttcaaaggtt tggtttatga gcatatattt tcctttttaa ttaataatca
      781 attttaactg attttctaca tctttaaaag taaacacttt atttccacaa ggataagaga
      841 tggaattttc ttgcatgaaa gatttt
//
LOCUS       DAQUWA010000175          861 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.175, whole genome shotgun sequence.
ACCESSION   DAQUWA010000175 DAQUWA010000000
VERSION     DAQUWA010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.175"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(19..228)
                     /locus_tag="R8X70_001963"
     CDS             complement(19..228)
                     /locus_tag="R8X70_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929697.1"
                     /translation="MNYDEFENKLKSISLSKKDFSEMVKMSYTGVTNWRQTNSIPGWV
                     NSWLINYEKAKVLDEISKSIKPFIK"
     gene            379..>861
                     /locus_tag="R8X70_001964"
     CDS             379..>861
                     /locus_tag="R8X70_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HEF2929698.1"
                     /translation="MEKLAVINGVDVELEVANDQVTTTSLDIAAVFNKRHDNIIAKIE
                     TFPKDSFTDLNFKASKYIDSTGRILPCYKITRDAFSLLVMGFTGEKAYKWKILFIKAF
                     NEMEKRLKNLEAEQMQKLAFHQSLGYKSQLAQQKQKYENEIKALKYDLEQSKNNFKDK
                     L"
BASE COUNT          332 a          124 c          117 g          288 t
ORIGIN      
        1 ctttaaaata cactattttt attttataaa aggttttata gattttgaaa tttcatctaa
       61 aacttttgct ttttcataat taataagcca actatttacc cagccgggta tagaatttgt
      121 ttgtctccaa ttggttacgc cggtatagct cattttaacc atttcagaaa aatctttttt
      181 gcttaaactg attgatttta atttattctc aaattcatca taattcattt taacaccttt
      241 acaaataaaa tatttattac tttacaaaaa aacaactaaa atatttataa aattattgac
      301 aatataacta aataatgtta taatttactc ataaaacaaa tgatttattt gttttaaatc
      361 aaaacaaaaa ggtaaaaaat ggaaaaatta gctgtaatta atggcgtgga tgtagagttg
      421 gaggtagcca acgaccaagt aacgactacc tctttagaca tcgcggcggt ttttaataaa
      481 cgccacgata atattatagc aaaaattgaa actttcccaa aggatagttt cactgacctt
      541 aattttaagg cgagtaaata tattgatagc acgggtagaa ttttaccttg ctacaaaatc
      601 actcgcgacg ctttttcttt gcttgttatg ggttttacag gcgaaaaggc ttataaatgg
      661 aaaatcctgt ttataaaagc tttcaatgaa atggaaaaac gccttaaaaa ccttgaagct
      721 gaacaaatgc aaaaactagc ttttcatcaa agcttaggtt acaaatctca attagcacag
      781 caaaagcaaa aatatgagaa tgagattaaa gctttaaagt atgatttaga acagagtaaa
      841 aacaatttta aagataaatt a
//
LOCUS       DAQUWA010000176          846 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.176, whole genome shotgun sequence.
ACCESSION   DAQUWA010000176 DAQUWA010000000
VERSION     DAQUWA010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.176"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>846
                     /locus_tag="R8X70_001965"
     CDS             <1..>846
                     /locus_tag="R8X70_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NTPase"
                     /protein_id="HEF2929699.1"
                     /translation="VAMSRASSIINNFNKLLSAEKKGLDEIKNEINTALLNIDIKIIV
                     VIDDLDRLADTDIQEIFQLVRSIADFKNTIYILSYDEEIVSKALNKIQKDKGGRYIEK
                     IVQVPIKLPKVSQENLKDIFIKKLKTIHKKHEALDKDEFIKKIKENNFADAFKSIRDM
                     ERFLNAFKIEVNAINQELYLYDFAVITLLKIFEPRLYDYIYDNRMLFIEQYNPYDHIS
                     SEIKIPENIEQEIKKITKSNKDFAFNLIGSIFPKINNQPQDYSQLIQNNTDNQKKRIT
                     YPSSF"
BASE COUNT          372 a           94 c          109 g          271 t
ORIGIN      
        1 cagtggcaat gtctcgagct tcaagtatta ttaataattt taacaaacta ttaagcgcag
       61 agaaaaaggg tttagatgaa atcaaaaatg aaattaacac cgctttatta aatatagaca
      121 taaaaataat cgtagtcatt gatgatcttg atagattggc cgatacagat atacaagaaa
      181 tttttcaact tgtaagatct atagctgatt ttaaaaatac catatatatt ctttcttatg
      241 atgaagagat tgtttctaaa gctttaaata aaattcaaaa agataaaggt ggtagatata
      301 tagaaaaaat agttcaagtt cctattaaat tgcctaaagt tagtcaagaa aacttaaaag
      361 atatatttat aaaaaaacta aaaacaattc ataaaaaaca tgaagcattg gataaagatg
      421 agtttattaa aaaaataaaa gaaaataatt ttgcagatgc ttttaaaagt attagagata
      481 tggagaggtt tttaaatgct tttaaaattg aagtcaatgc tataaatcaa gaattatatt
      541 tatatgattt tgctgtgatc acattattaa aaatatttga acctagactt tatgattata
      601 tatatgacaa tagaatgtta tttattgaac aatataatcc ttatgatcac ataagtagtg
      661 aaataaaaat ccctgaaaac attgaacaag aaataaaaaa aattactaaa tcaaataagg
      721 attttgcttt taatctaatt gggtctattt ttccaaaaat aaataaccaa ccgcaagatt
      781 atagtcagct aattcaaaac aatacagaca accaaaagaa aagaataact tatccttcat
      841 ctttta
//
LOCUS       DAQUWA010000177          833 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.177, whole genome shotgun sequence.
ACCESSION   DAQUWA010000177 DAQUWA010000000
VERSION     DAQUWA010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.177"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..498
                     /locus_tag="R8X70_001966"
     CDS             <1..498
                     /locus_tag="R8X70_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929700.1"
                     /translation="NFTEELSFKECCEKLLTKEKPKFELPKSLTKNRSDKLLAKFKEK
                     IQKDQENAKRFLDDALALKQILENILSKDFLLPLEFLEKVYQNIENFNHSLDEDEFIQ
                     DGILKAVMYERGLKISLVYKENIVDNASFITAYIKAYHEWLLYFVEKLEQRINIIINS
                     FKETQ"
     gene            495..>833
                     /locus_tag="R8X70_001967"
     CDS             495..>833
                     /locus_tag="R8X70_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929701.1"
                     /translation="MTILEKNIQALLSGVNEPLGNRLLNFIQNKTCSRFNIDENLNIY
                     DKTHNVFMYENLEEELNFFYQSILEKTPRYPFVCIYGIGNALLIKNLAKHYKHLFVFE
                     SEIELFILALS"
BASE COUNT          344 a           99 c          110 g          280 t
ORIGIN      
        1 aatttcactg aagaactttc ctttaaagaa tgttgtgaaa aactccttac aaaagaaaaa
       61 cctaaatttg aacttccaaa aagtttaact aaaaatagaa gtgataaact actagctaaa
      121 ttcaaagaaa aaatacaaaa agatcaagaa aatgctaaaa gatttttaga cgatgcttta
      181 gctttaaaac aaattttaga aaatatactc agtaaagatt ttcttttacc tttagaattt
      241 ttagaaaaag tctatcaaaa catagaaaat ttcaatcact ctttagatga agatgagttt
      301 atacaggatg gtattttaaa agcagtgatg tatgagcgag gacttaagat aagtttagtt
      361 tataaagaaa atattgtaga taatgctagt ttcatcacag cctatatcaa agcttatcat
      421 gaatggttgc tttattttgt agaaaaacta gagcaaagaa taaatattat catcaattct
      481 tttaaggaaa cccaatgacc atactagaaa aaaacataca agctttatta agcggagtaa
      541 atgaaccctt aggaaataga cttttaaatt tcatacaaaa taaaacttgt tctcgtttta
      601 atatagatga aaatttaaat atctatgata aaactcataa tgtttttatg tatgaaaatt
      661 tagaagaaga attaaatttt ttctatcaaa gtattttaga aaaaactcct agatatcctt
      721 ttgtatgtat ttatggtata ggcaatgctt tactgattaa aaatttagct aaacactata
      781 aacatctttt tgtatttgaa agtgaaatcg aactttttat cttggcttta agc
//
LOCUS       DAQUWA010000178          806 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.178, whole genome shotgun sequence.
ACCESSION   DAQUWA010000178 DAQUWA010000000
VERSION     DAQUWA010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.178"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            109..>806
                     /locus_tag="R8X70_001968"
     CDS             109..>806
                     /locus_tag="R8X70_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEF2929702.1"
                     /translation="MLITFGIFYYNNLQGSEKIAQITKNLINKEINVKVELLTKSMAI
                     ALGDLIKNVHSEEEKVKIIATAIENFRFEEDKSGYFFVYQKTTVKAHPVRKDLIGTDL
                     YNAKDENGVFYVRELYQRALEKGGFVTFYFTKPQPDGKNIIAEKTAYSYLIPDTNDLW
                     ISTGVYKDTLEPYIDGNLEELLSFFSKNFFKTIIFFTLFILIIIPFIFIFYRNLITGV
                     QGIKTNITSFFDFI"
BASE COUNT          310 a          110 c          120 g          266 t
ORIGIN      
        1 cttaactctt agtagctaaa attatgttta aaaaaataat aaggagtgtc tatgaaatta
       61 tcaattcgta aaaaaatgct tatgctagga ggcatttgtc ttgtttcgat gctaataacc
      121 tttgggattt tttattacaa caatctgcaa ggaagcgaaa aaatagctca aataacaaaa
      181 aatttgatca ataaagaaat aaatgtcaag gtagaactct taaccaaatc gatggctatt
      241 gctttaggag atttgatcaa aaatgttcac agtgaagaag aaaaagtcaa aattatagct
      301 actgcgattg aaaattttag atttgaagaa gataaaagcg gatatttctt tgtttatcaa
      361 aaaaccaccg ttaaagccca tcctgttaga aaagacttaa tcgggacaga tttgtataat
      421 gcaaaagatg aaaatggagt tttttatgtg cgagaattat accaaagagc attagaaaaa
      481 ggaggatttg tcacttttta ctttacaaag cctcaacctg atggaaaaaa tatcatagca
      541 gaaaaaacag cttatagtta tttaatacct gatacaaatg atttatggat ttctacaggt
      601 gtttataaag atactttaga accttatatt gatgggaact tagaagaatt gttatcattt
      661 ttttctaaaa acttttttaa gactataata ttttttacat tatttatact catcatcata
      721 ccatttattt ttatattcta tagaaatctc atcaccggag ttcaaggcat aaaaacaaac
      781 atcacctcct tctttgattt catcaa
//
LOCUS       DAQUWA010000179          780 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.179, whole genome shotgun sequence.
ACCESSION   DAQUWA010000179 DAQUWA010000000
VERSION     DAQUWA010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.179"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..681
                     /locus_tag="R8X70_001969"
     CDS             <1..681
                     /locus_tag="R8X70_001969"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929703.1"
                     /translation="KRASELLQIANNYNIEVSEVFSALKQALEVVLKCGKLHADFSNE
                     KISFYEIIYNRFGEKRKKFVQIKRNNYKAVQDRFISIVISYSLEKKREQVKSLKSMIF
                     KGKIEKVLKSGFEVSSSIGFGFLPKVEILRKDLARMQLGTELYLAIKKFKGSKKAPNG
                     ALVFTRKNMNILEHEIIDNMSDCGVYYIEKISARKISIFCTKMPTKDQIKNTMRAANT
                     FLDIQVRN"
BASE COUNT          322 a           88 c          128 g          242 t
ORIGIN      
        1 aaaagagcat cagagctttt acaaattgct aataattaca atattgaagt atctgaagtg
       61 ttttcagcac ttaaacaagc tcttgaagtt gttttaaaat gcggaaaatt acatgctgat
      121 ttttcaaatg aaaaaatttc tttttatgaa attatttata accgttttgg tgagaaacgc
      181 aaaaaatttg ttcaaattaa aagaaataat tataaagcag tccaagatag atttataagt
      241 attgtaattt cttattcttt agaaaaaaag agagaacaag ttaaatcttt aaaatcgatg
      301 atttttaaag gaaagataga aaaagtctta aaatcaggtt ttgaagtttc ttcaagcata
      361 ggctttggtt ttttgccgaa agttgaaatt ttacggaaag atttagcaag aatgcaatta
      421 ggaactgaac tataccttgc tatcaaaaag tttaaaggct caaaaaaagc tcctaatggg
      481 gctttggttt ttacaaggaa aaatatgaat attttagaac atgaaatcat agataacatg
      541 agcgattgcg gcgtgtatta cattgaaaaa ataagcgcaa gaaaaatatc tatcttttgt
      601 acaaaaatgc ctacaaaaga tcaaattaaa aacacaatgc gtgcagcaaa tacttttctt
      661 gatattcaag taagaaacta attttaaaag ggaaaatatg taatgaataa tagccgaagt
      721 aaaaacgcaa aatcttttag aatgtgggta acaaaagaag ttttgcctag tattagaaaa
//
LOCUS       DAQUWA010000180          780 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.180, whole genome shotgun sequence.
ACCESSION   DAQUWA010000180 DAQUWA010000000
VERSION     DAQUWA010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.180"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..728)
                     /locus_tag="R8X70_001970"
     CDS             complement(<1..728)
                     /locus_tag="R8X70_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929704.1"
                     /translation="MGSDFNKAAGLPEDFKIHKSTLDEIKKAAENDPVVSSTKEYLGV
                     SEYYTNIDMAETIKQYYNLFSNALGQSFPNDKTSFSEADINSMPKGYAINGIKSMDFN
                     DPSNRMNITHLRDFSNSSITNIYQTPEQMKEAESLYIQSGSLIDGINGHSFGLSLEEI
                     KNVSKGEDWQFNPDMSVYPQNEDGSYSKEALFMSFLKSYGSGQPVESSETTLNPKVEA
                     YNRAMAKESFNGDSIALNDIMTGKV"
BASE COUNT          250 a          143 c           96 g          291 t
ORIGIN      
        1 acttttcctg tcatgatgtc atttaaagca atgctatcac cattaaaact ttctttagcc
       61 atagccctat tgtaagcttc tacttttgga ttaagtgtag tttctgaact ctcaacaggt
      121 tgtccgctac catatgattt taaaaaactc ataaataaag cttctttaga ataacttcca
      181 tcttcatttt gtggataaac tgacatatca ggattaaact gccaatcttc acctttagaa
      241 acatttttga tttcttccaa agataaacca aaactatgtc catttatgcc atctattaaa
      301 gatcctgatt gtatatataa actttcagct tctttcattt gttcaggggt ttgataaata
      361 tttgtaatag aagaatttga aaaatctctt aagtgagtga tattcattct attgcttgga
      421 tcattaaaat ccatcgattt tattccattt atagcatacc ccttaggcat agaatttata
      481 tctgcttcac taaaacttgt tttatcattt ggaaaacttt gacctaaagc attagaaaaa
      541 agattataat attgttttat ggtttcagcc atatctatat tagtataata ctcgcttacg
      601 cctaagtatt cttttgtact tgaaacaaca ggatcatttt cggcagcttt tttaatctca
      661 tccaaagtag atttatgtat cttaaaatct tcaggaagtc ccgcagcttt gttaaaatca
      721 cttcccatat aaccattagc atctactcca taaccataag ctaaagatac aatattgctt
//
LOCUS       DAQUWA010000181          758 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.181, whole genome shotgun sequence.
ACCESSION   DAQUWA010000181 DAQUWA010000000
VERSION     DAQUWA010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 758)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.181"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>758
                     /locus_tag="R8X70_001971"
     CDS             <1..>758
                     /locus_tag="R8X70_001971"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEF2929705.1"
                     /translation="GITTISTPNNFSQLNLIQNIEQNVKYGDKDSVFVGSPRKLNYDN
                     NEFLGINFGMPIFNNKGKFIGVIGYTLDLLEISEIMLDPKFDFFEGDLRILMNDQGII
                     AVHKIKNGILKTLFDINKDQSAQLIVEAVKNHKDEILDNYIASTGDPSYASISSFSTL
                     GNSSHWSVIVTAPKKSVLAPLYKLQYTIISVAIIALIAILTVVYFFIRKIIGSRIPLI
                     LKSLENFFRFLNHEKIEIQTIEIKANDELGKMGK"
BASE COUNT          278 a           97 c          111 g          272 t
ORIGIN      
        1 tggaataact actatttcaa ctccaaacaa tttctctcaa ttaaatctaa tacaaaatat
       61 cgaacaaaat gtaaaatatg gagataaaga ctctgttttt gtaggttctc ctagaaaact
      121 taattatgat aataatgaat ttttaggtat aaatttcggt atgcctattt ttaacaataa
      181 gggtaaattt attggagtta taggatatac tctagattta ctagaaattt ccgagattat
      241 gttggatcca aaattcgact tttttgaagg ggatctaaga atcttaatga acgatcaggg
      301 tattattgct gttcataaaa ttaaaaatgg aattttaaaa actttatttg atattaacaa
      361 agatcaatct gctcaattaa ttgttgaggc ggttaaaaac cataaagatg aaatcttaga
      421 taattatatt gcctcaacag gagatcctag ttatgctagt atctcttcat ttagcacttt
      481 aggtaattct agtcattgga gtgtaattgt aacagctcct aaaaaatcag ttttagcccc
      541 tttatataaa ctacaatata ctattattag tgttgctata atagcactaa ttgctatttt
      601 gactgttgtg tactttttta taagaaaaat cataggctct agaattcctc ttatacttaa
      661 gtctttggaa aatttctttc gctttttaaa tcatgaaaaa atagaaattc agacaattga
      721 aattaaagct aatgatgaat taggcaaaat gggtaaaa
//
LOCUS       DAQUWA010000182          750 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.182, whole genome shotgun sequence.
ACCESSION   DAQUWA010000182 DAQUWA010000000
VERSION     DAQUWA010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.182"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..213)
                     /locus_tag="R8X70_001972"
     CDS             complement(<1..213)
                     /locus_tag="R8X70_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEF2929706.1"
                     /translation="MGFRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNGNDA"
     gene            complement(358..>750)
                     /locus_tag="R8X70_001973"
     CDS             complement(358..>750)
                     /locus_tag="R8X70_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEF2929707.1"
                     /translation="QGSGFSSQSGLSQFATMKTSAGNSLGAKDETAGVTTLKGAMAVM
                     DIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYS
                     KANILAQSGSYAMAQANSVQQNVLRLLQ"
BASE COUNT          228 a          144 c          132 g          246 t
ORIGIN      
        1 agcatcatta ccattgttta tagcttgacc taaagtagct gcttgtgaac gcaaagaatc
       61 tgctatcgcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctacttaaa gacttatcca gttctctagc attaacaact gaatttgcat gtgcgtttaa
      181 tgcaccgatg ttagtattta tcctaaaacc cattttaaat cctttcaaaa tattgcatcg
      241 aaaagattaa agcaagaagt gttccaagtt ttagtttaat taaaaattct agagtttaaa
      301 ataaaaaagc ctagcattaa actaggcttg gatttatata tattgcagat tttcaaacta
      361 ctgtagcaat cttaaaacat tttgctgaac agaattagcc tgtgccatgg cataagagcc
      421 actttgagct aagatatttg ctttagagta gtttgcactc tcggctgcaa agtccacatc
      481 acggatttgt gactcagctg ctttaacatt tacctgagta acagtgatgt tgtttatagt
      541 tgatgtaact tgattttgca ctgaaccaat gtctgctctg atttgatcaa gatttgttat
      601 agctgtttca gctatatcca tcacagccat agcaccttta agtgtggtaa cacctgcggt
      661 ttcatcttta gctccaagag agttacctgc tgaagttttc atagttgcaa actgagaaag
      721 tccgctttga ctagaaaaac ctgaaccttg
//
LOCUS       DAQUWA010000183          747 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.183, whole genome shotgun sequence.
ACCESSION   DAQUWA010000183 DAQUWA010000000
VERSION     DAQUWA010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.183"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..171
                     /locus_tag="R8X70_001974"
     CDS             <1..171
                     /locus_tag="R8X70_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mating pair stabilization protein"
                     /protein_id="HEF2929708.1"
                     /translation="FTPEEFQKLDFSEIDLSEFIADIVGSFDTGKIQADSVKIQEKIQ
                     NNIENATKKPTN"
BASE COUNT          282 a          111 c          131 g          223 t
ORIGIN      
        1 ttcactcctg aagaatttca aaaattagat tttagcgaaa ttgatttaag tgaattcatt
       61 gctgatattg taggaagttt tgacacagga aaaatacaag ctgattctgt gaaaatacaa
      121 gaaaagattc aaaacaatat cgagaatgca acgaaaaaac ctacaaatta aaaaagaaaa
      181 taaattatta gaaaggagag aagcttagtt aaaagtttgt ttggtgtaag ccaaagggat
      241 tgttctaaac cctgcaaaag caggggatac tcaataagcc ttgacatagc aaagcattaa
      301 gagtataatt ataagaacaa tgtttagcaa tttaatcacc gcctttctag gttatgatta
      361 atgccaaagg tagccgcctt tggcatctac cttttataat tataccaaaa acaaactctt
      421 taacttctta aaacagtcca tgaaaagatt ttacttgtta ttccttagca ctttgttttt
      481 tgcaccttca tttttatttg gtgcaaatat tgaaaatata aaaaaatata gaaattcaat
      541 agaaaggaga gaagcttagt taaaagtttg tttggtgtaa gccaaaggga ttatcctaaa
      601 ccctacaaaa gcaggggata ctcaataagc cttgacatag caaagcatta agagtataat
      661 tataaggata atttttgtta gcattaagct cacctccctt ctgggtggta aattaacgct
      721 aaagggtggc agccctttgg cgttgca
//
LOCUS       DAQUWA010000184          739 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.184, whole genome shotgun sequence.
ACCESSION   DAQUWA010000184 DAQUWA010000000
VERSION     DAQUWA010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.184"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(392..>739)
                     /locus_tag="R8X70_001975"
     CDS             complement(392..>739)
                     /locus_tag="R8X70_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3825 domain-containing protein"
                     /protein_id="HEF2929709.1"
                     /translation="NHLHLFERKERLPEIVKKLNDRFIGHIINGELKIIKDNYNLQKM
                     IIPAAYKQRVVLYIPLKLQEESVDTIVVVEKEEVKNEQYYAVRTILNPHDNIYKTARV
                     LSIVESEWVKNTI"
BASE COUNT          251 a          114 c           88 g          286 t
ORIGIN      
        1 ttagggaaaa caaattgaaa aaattgcaaa aacaaaaaat gtctaattct gcaaaaaaag
       61 aagataaaaa tacagaaatt ccataaaaaa caatcggtga aagtgttgtt tttatccttt
      121 gtatctttca aaagccgtaa taatcttaac attttatatt ttaataaata ttacatgaat
      181 tatagtttta gcctattatt aattgtttat atggtaaaat tgctcttgtt tctaaattgc
      241 ttgcagtcat gttttagcct attattaatt gtttatatgg taaaatacaa ttcaattaca
      301 tccatacttc acacagtttt agcctattat taattgttta tatggtaaaa tagacttatc
      361 tcaaaagcct attttaccaa tgttttcact ttcaaatggt gtttttaacc cattcagatt
      421 caactatcga aagaactctt gcggttttgt aaatattatc atgcggattt agtatagttc
      481 tcacagcgta atactgctcg ttttttacct cctctttttc aactacaact atcgtatcaa
      541 ctgattcttc ttgaagtttc aaaggaatgt ataaaactac cctttgctta taagctgcag
      601 gaataatcat cttttgaaga ttataattat ctttgatgat tttcaattca ccattaataa
      661 tgtgtcctat gaacctatca tttagttttt tcacaatttc aggtaatcgc tcttttctct
      721 caaaaagatg caaatgatt
//
LOCUS       DAQUWA010000185          717 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.185, whole genome shotgun sequence.
ACCESSION   DAQUWA010000185 DAQUWA010000000
VERSION     DAQUWA010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.185"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..710)
                     /locus_tag="R8X70_001976"
     CDS             complement(<1..710)
                     /locus_tag="R8X70_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEF2929710.1"
                     /translation="MEIFLDLLNTQSPTNTANNFSITQPNVSIIIKNLEQDLGGALFE
                     RLGKKLLPTPKALYLGKIWLKLVQDYYKSLEELNDENTLLGEIKIAATQSIAEHFLAP
                     ILFDFKSKFSNVKIHFQTQNSKECLNLLKNGDIEFAIVEAELNPTLIDHEGLKMEFWQ
                     KDELVVASSNKNLSQKEFYIDELLKQKWILRETGSGLRDKFLNEIGDVSKKLKFFLEL
                     DRMSAIKELVIQKNAISI"
BASE COUNT          232 a          106 c          104 g          275 t
ORIGIN      
        1 aaaatagaaa tagcattttt ttggataacg agttctttaa tagcagacat tctatcgagc
       61 tctaaaaaga atttaagttt tttggaaaca tcgcctattt cgtttagaaa tttatctcta
      121 agccctgagc ctgtttcacg caaaatccat ttttgtttaa gtaattcatc gatataaaat
      181 tctttttggc ttaaattttt attactacta gcaactacaa gttcatcttt ttgccaaaat
      241 tccattttta acccttcgtg atcgattaaa gtaggattaa gttctgcttc aacaatggca
      301 aattctatat ctccattttt taataaattt aaacattctt ttgaattttg agtttgaaaa
      361 tgtattttaa cattgctaaa tttagattta aaatcaaata aaataggagc aagaaagtgt
      421 tcagctatgc tttgagtagc agcgatcttg atttctccta agagggtatt ttcatcatta
      481 agttcttcta agcttttgta ataatcttgc acaagtttta gccaaatttt acccaaatat
      541 aaagcttttg gagtaggtaa aagctttttt cctagtcttt caaacaatgc tccgcctaag
      601 tcctgctcta aatttttaat aatgatggaa acattaggtt gtgtgatgga aaaattattg
      661 gcggtatttg taggactttg agtatttaaa agatctaaaa aaatttccat atctttg
//
LOCUS       DAQUWA010000186          712 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.186, whole genome shotgun sequence.
ACCESSION   DAQUWA010000186 DAQUWA010000000
VERSION     DAQUWA010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.186"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..536
                     /locus_tag="R8X70_001977"
     CDS             <1..536
                     /locus_tag="R8X70_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEF2929711.1"
                     /translation="IISFYEKCKIKKIANSFSFKKILQKYPNFPYRFKDKKLKIHFLI
                     HDNFLKTMAFEAFGQSNGLKKALKQSKMKNIVLNSGVPTALAALKKGLNYEKYEAKKI
                     NGARLNINDFLTFGQKLWYMDEKKASFWVGNTRKNYLVAGCFLLFSIFEREKLIVIDE
                     GLREGLCMADLNLKDYQ"
BASE COUNT          285 a           69 c          124 g          234 t
ORIGIN      
        1 gtattatcag tttttatgaa aaatgcaaga taaaaaaaat cgcaaattct ttttctttta
       61 aaaaaatact tcaaaaatat cctaattttc cttatagatt taaagataaa aagctaaaaa
      121 ttcatttttt aattcacgat aattttttaa aaaccatggc ttttgaggcc tttgggcaaa
      181 gcaatggttt aaaaaaagca ttaaaacaaa gcaagatgaa aaatatcgtt ttaaattcag
      241 gtgtccctac ggctttagcg gctttaaaaa aaggcttaaa ttatgaaaaa tacgaggcaa
      301 agaaaatcaa tggtgcaaga ttaaatatca atgatttttt aacttttggg caaaaacttt
      361 ggtatatgga tgaaaaaaag gcaagttttt gggtaggaaa tacgcgaaaa aattatttag
      421 ttgcgggatg ttttttgctt tttagtattt ttgaaagaga aaaacttata gtgattgatg
      481 agggtttaag ggaggggctt tgtatggctg atttaaattt aaaagattac caatgaaaat
      541 taccatagca attatttttt actttattta ccctaatctt tttaagtaca tgtgctttta
      601 aagaaaaaaa gcaagtgaaa tagaaactct tgcaagtaat tatggtggaa tttatatctt
      661 tgataaaaaa ataagagaag agatattgga aaatgaaaga aagaaaggag ag
//
LOCUS       DAQUWA010000187          702 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.187, whole genome shotgun sequence.
ACCESSION   DAQUWA010000187 DAQUWA010000000
VERSION     DAQUWA010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.187"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            104..>702
                     /locus_tag="R8X70_001978"
     CDS             104..>702
                     /locus_tag="R8X70_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEF2929712.1"
                     /translation="MFENIEYLLLKNYLHIKDYFKLDETASYALSLLAKNNRKRFSIN
                     RKIQHFKALSTLKYLLRAGIIKLEHSKEAKRIKDKRQKLKKELRSYVIQDKIIFANHF
                     TRFFFYFLKPNEKLILQNRYEEVLGLIKEKFELYQSFCFEQLSRELLEKKFQVSGVQS
                     YWDKNLELDLYYKDDEISFIGEVKFKNKKICRNILNLLES"
BASE COUNT          260 a           68 c          115 g          259 t
ORIGIN      
        1 ttttgcaaaa ttttgtaata cttcagcttt agctaaaatt tttgattttt atagtgtttt
       61 tgagggtttt gagagtttag atagtttaaa ttttgaagaa gatgtgtttg agaatataga
      121 atatctttta ttgaaaaatt acttacatat taaagattat tttaagcttg atgaaaccgc
      181 ttcttatgct cttagcttac tggctaaaaa caatcgtaag cgtttttcta tcaatagaaa
      241 aattcagcat tttaaagctt tatcaacttt aaaatatctt ttaagagcgg ggattataaa
      301 acttgagcat agcaaagaag caaaaaggat aaaagataaa cgacaaaaac ttaaaaaaga
      361 attgagatct tatgtgatac aagataaaat tatctttgcc aatcacttca cccgtttctt
      421 tttttatttt ttaaagccca atgaaaagtt gattttacaa aatcgttatg aagaagtttt
      481 gggattgatt aaagagaaat ttgagcttta tcaaagtttt tgttttgaac agctctctag
      541 ggaattactt gagaaaaaat ttcaagtgag tggggtgcaa agttattggg ataaaaattt
      601 agaacttgat ctttattata aggatgatga gataagtttt atcggtgaag ttaaatttaa
      661 aaataaaaaa atttgtagaa atattttaaa tcttttagaa tc
//
LOCUS       DAQUWA010000188          696 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.188, whole genome shotgun sequence.
ACCESSION   DAQUWA010000188 DAQUWA010000000
VERSION     DAQUWA010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.188"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            175..696
                     /locus_tag="R8X70_001979"
                     /pseudo
     CDS             175..696
                     /locus_tag="R8X70_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780055.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body protein FliL"
BASE COUNT          294 a           93 c           74 g          235 t
ORIGIN      
        1 attatatcca agaaattttt agattaattt tattttacac aagtttttgg tttacttgtg
       61 ttaaaatgtc caaatcaaat attggataaa atgatgtaaa aataaaattt atataaacta
      121 gacaaaatac ttcaagaaat tgattttata tttaaacaaa ccaaaggcga gcttatgcaa
      181 gctttaaaaa atgaaatcaa acaaaaagct attttcatgt cactaatcaa cattaaagaa
      241 acgataaaaa atatccaaga tagtgcagat gctgaagtta tggtaatttt ttgtgaagaa
      301 gatatgaaaa gactctcaaa aagtagaaat attgcagcac ataatagtca agccatggat
      361 ttaaatatcg taacaaatct tattcgttac gatctagcaa gacttaaaca aagtattgtt
      421 aattttaaaa ataatccaaa caatttacat tttattccaa aagaagaaaa tgtcaaaaaa
      481 aagaatacta aaaccactag aagtattaat tattttttta tttgcataca ttttatcttg
      541 tattatattt attacctttt tttacttaac aagccctcca aaagtataag acaagaaaat
      601 ttttcatata acactttcat acaaattatt tttattcatt agatcctttt attcttaact
      661 taccacaagc tggcagacaa aaatatatac actgca
//
LOCUS       DAQUWA010000189          689 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.189, whole genome shotgun sequence.
ACCESSION   DAQUWA010000189 DAQUWA010000000
VERSION     DAQUWA010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.189"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            1..>689
                     /locus_tag="R8X70_001980"
     CDS             1..>689
                     /locus_tag="R8X70_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEF2929713.1"
                     /translation="MKWSKDFSIKNMQLDKQHELIFEIAEIANDLALKIQDNDVQHKN
                     DLKQILTKLFQYVKIHFKDEEKFMESIDFPLIEEHRKSHQILLKKTKELLEHSNDIVK
                     MSFELSTLTKDWILDHFANEDLWIANFTKKALHLQEIHYNLEQYIKLKSIRQDLKTEK
                     TYDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIF
                     EDALQNHHFTT"
BASE COUNT          285 a           94 c           92 g          218 t
ORIGIN      
        1 atcaaatgga gtaaagattt tagcattaaa aatatgcaat tagacaaaca acacgaacta
       61 atttttgaaa ttgctgaaat tgcaaacgat ttagctttaa aaattcaaga taatgatgtg
      121 caacacaaaa atgatttaaa acaaattctt acaaagttat tccaatatgt aaaaattcat
      181 ttcaaagatg aagaaaaatt tatggaaagc attgattttc ctttgattga agaacataga
      241 aaatctcatc aaatattatt aaaaaagact aaagagcttt tagaacactc aaatgatatt
      301 gttaaaatgt catttgaact ttcaacattg accaaagatt ggattttaga tcattttgct
      361 aatgaagatt tatggatagc taacttcaca aaaaaagctc tacatcttca agagattcat
      421 tataatctag agcaatacat aaaattaaaa tcaattaggc aagatttaaa gactgaaaaa
      481 acctatgatt atatttgcaa ttgttctttg cgtatccatg cagttccaca gactatacat
      541 caagagcttg ttagcaaaga aaatacctta aagtgcgaaa aatgtgggca aattttagtt
      601 catttggatt attttgattt gaatcaaaat ttcgaaaaat tcaatgctat ttttgaagat
      661 gcactacaaa atcaccattt cacgactca
//
LOCUS       DAQUWA010000190          687 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.190, whole genome shotgun sequence.
ACCESSION   DAQUWA010000190 DAQUWA010000000
VERSION     DAQUWA010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.190"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..379
                     /locus_tag="R8X70_001981"
     CDS             <1..379
                     /locus_tag="R8X70_001981"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929714.1"
                     /translation="ELGKLIETQYECILDNVSKASSKKILANIIDLKNIIIDDYFINL
                     IEHTIDGNKFEFSHDMNLIKYKGYVANLNTLEIAGLPQEMEKVGDELILPDFPKRLDE
                     NLIREFQALIKLVFRKDCNKIKL"
BASE COUNT          277 a           64 c          101 g          245 t
ORIGIN      
        1 tgagttagga aaattgatag aaactcaata cgagtgcatt ttggataatg tttctaaagc
       61 aagttctaaa aaaattttag caaatataat agatttaaaa aatatcatca tcgatgatta
      121 ttttataaac ttgatagaac atacaataga tggtaataaa tttgaattta gccatgatat
      181 gaatttaatc aaatataaag gctatgtagc aaatttaaac actttagaga ttgcaggact
      241 accgcaagag atggaaaagg taggagatga actgattttg cctgattttc caaaaagact
      301 agatgaaaat cttataagag agtttcaagc cctgataaag ttagtcttta gaaaggattg
      361 taataaaatt aaattgtaga aaacgcactt tttaacgaat aaacgctcag gtgaagtgct
      421 aaacctttat tttagcctat tattaattgt tttatgaaat tgtaatattc ttttacttaa
      481 aaaaatatta tatttttaaa taatacttta ttaaatattt gcatgaaaaa ataaatataa
      541 aatattatgc aatatgtttg aagttttagc ctattattaa ttgtttatat gataaaatgg
      601 catttttttg aataaaacca agcaaaatgt tttagcctat tattaattgt ttgtatgata
      661 aaatagtaat tttataatgg aagctag
//
LOCUS       DAQUWA010000191          663 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.191, whole genome shotgun sequence.
ACCESSION   DAQUWA010000191 DAQUWA010000000
VERSION     DAQUWA010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.191"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>663
                     /locus_tag="R8X70_001982"
     CDS             <1..>663
                     /locus_tag="R8X70_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEF2929715.1"
                     /translation="ASSNQTVKATIGATQSSKIGLTRFETGGRISSSGEVQFTLKNYN
                     GIDDFQFQKVVISTSVGTGLGALAEEINKSADKTGVRATFTVETRGMAAVRSGTTSDT
                     FAINGVTIGQVAYEDGDANGALVSAINSVKDTTGVEASIDANGQLLLSSREGRGIKIE
                     GSIGGGAFINKDMMENYGRLSLVKNDGKDILISGTGLSSTGFGASNFISQASISLRES
                     KGR"
BASE COUNT          222 a           95 c          149 g          197 t
ORIGIN      
        1 gcaagttcaa atcaaactgt aaaagctacc ataggagcaa ctcaatcttc taagataggt
       61 ttaacacgct ttgaaacagg aggaagaatt tcatctagtg gtgaagtaca atttactctt
      121 aaaaactaca acggtataga tgattttcag tttcaaaaag ttgtgatttc aacttcagtt
      181 ggaacaggac ttggagcctt agcagaagag atcaataaaa gtgctgataa aacaggtgtt
      241 agagctactt ttacagtaga gactcgaggt atggctgcag ttagatctgg aactacttca
      301 gatacttttg ctatcaatgg ggtaactata ggtcaagtag cctatgaaga tggtgatgct
      361 aatggagctt tggtttctgc aatcaattca gttaaagata ctacaggagt tgaagcttca
      421 atcgatgcta atggacagct tttgcttagc tcaagagaag gaagagggat taaaatcgaa
      481 ggaagcatcg gtggtggagc ttttatcaat aaagacatga tggaaaatta tggtcgttta
      541 tctttggtta aaaacgatgg taaggatatt ttaatcagtg gaacaggcct ttcttctaca
      601 ggttttggag caagtaattt tatttctcaa gcttctattt ctttaagaga atcaaaagga
      661 aga
//
LOCUS       DAQUWA010000192          663 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.192, whole genome shotgun sequence.
ACCESSION   DAQUWA010000192 DAQUWA010000000
VERSION     DAQUWA010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.192"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>663
                     /locus_tag="R8X70_001983"
     CDS             <1..>663
                     /locus_tag="R8X70_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEF2929716.1"
                     /translation="ASSNQTVKATIGATQSSKIGLTRFETGGRISSSGEVQFTLKNYN
                     GIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAVRAGTTSDD
                     FTINGVKIGKVEYKDGDSNGALVAAINSVKDTTGVEASIDANGQLLLSSREGRGIKIE
                     GSIGGGAFINKDMMENYGRLSLVKNDGKDILISGTGLSFTGFGASNFISQASISLRES
                     KGQ"
BASE COUNT          224 a           95 c          152 g          192 t
ORIGIN      
        1 gctagttcaa atcaaactgt aaaagctacc ataggagcaa ctcaatcttc taagataggt
       61 ttaacacgct ttgaaacagg aggaagaatt tcatctagtg gcgaagtgca atttactctt
      121 aaaaactaca acggtataga tgattttcag tttcaaaaag ttgtgatttc aacttcagtt
      181 ggaacaggac ttggagcctt agcagatgag atcaataaaa atgccgataa aacaggtgtt
      241 agagctactt ttacggtaga aactagaggt atggctgcag ttagagctgg aactacttca
      301 gatgatttta ctatcaatgg ggtaaaaatc ggtaaagtag aatacaaaga tggcgatagc
      361 aacggtgctt tggttgctgc aatcaattcg gttaaagata ctacaggagt tgaagcttca
      421 atcgatgcta atggacagct tttgcttagc tcaagagaag gaagagggat taaaatcgaa
      481 ggaagcatcg gtggtggagc ttttatcaat aaagacatga tggaaaatta tggtcgttta
      541 tctttggtta aaaacgatgg taaggatatt ttaatcagtg gaacaggcct ttcttttaca
      601 ggttttggag caagtaattt tatttctcaa gcttctattt ctttaagaga atcaaaaggg
      661 cag
//
LOCUS       DAQUWA010000193          657 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.193, whole genome shotgun sequence.
ACCESSION   DAQUWA010000193 DAQUWA010000000
VERSION     DAQUWA010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.193"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..218
                     /locus_tag="R8X70_001984"
     CDS             <1..218
                     /locus_tag="R8X70_001984"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929717.1"
                     /translation="IKMSSILNAYNETRILQEKNPNNAVVISYLNYKGYYPKIQNIDL
                     LIIQGALKAIQQNNTNFEDNVKLKYEK"
     gene            208..558
                     /locus_tag="R8X70_001985"
     CDS             208..558
                     /locus_tag="R8X70_001985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929718.1"
                     /translation="MKNEIVKDNKEIETFEKVGKVMAEIEVSKQKATLAQIEATREDN
                     QRQYDFAVNKLTKENKKWHKSMNIACTAVFILLIASLYLILFTEKIEIGLGLLSTTLA
                     SVFGYLAGVGSSKT"
BASE COUNT          266 a           79 c          103 g          209 t
ORIGIN      
        1 gaattaaaat gagtagtata ttaaatgctt acaatgaaac aagaatactt caagaaaaaa
       61 atccaaacaa tgctgttgtt atttcttatt taaactataa agggtattat ccaaaaatac
      121 aaaatataga tctattgata atacaaggtg cattaaaagc tatacagcaa aacaatacaa
      181 attttgaaga taacgtgaaa cttaaatatg aaaaatgaaa tagttaaaga taataaagaa
      241 attgaaactt ttgaaaaagt aggcaaagtt atggctgaaa tagaagttag caagcaaaag
      301 gctactttag ctcaaattga agccactaga gaagataatc aaagacaata tgattttgct
      361 gttaataaac tgactaaaga aaataaaaaa tggcataaat ctatgaatat agcatgtact
      421 gcggttttta ttcttctgat agctagtctt tatcttattt tatttactga aaaaatagaa
      481 ataggattag gcttgctcag tacaacatta gcaagtgttt ttggatattt agcaggtgtt
      541 ggttcatcta aaacctaact taactttgct tggttagaat tttaattaag agcttaaggg
      601 cagaatctcg ccctttataa ttgcgaaaga tgtgtataaa cttttcactt ctctttt
//
LOCUS       DAQUWA010000194          656 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.194, whole genome shotgun sequence.
ACCESSION   DAQUWA010000194 DAQUWA010000000
VERSION     DAQUWA010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.194"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            11..656
                     /locus_tag="R8X70_001986"
                     /pseudo
     CDS             11..656
                     /locus_tag="R8X70_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807409.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
BASE COUNT          212 a           96 c          115 g          233 t
ORIGIN      
        1 aatatagttc atgaaaagat tttacttttt attctttagc actttgtttt ttgcaccttc
       61 atttttattt ggtgctacaa acatagctaa tagcaattta atttatactt ggggttatgg
      121 cgatgtgatg aatgaaatca tgcaagcggt taaaggaata accactgaaa cagattatat
      181 cgttaatgca gccttttagc tatttcatta ttacttttta gtattaaaaa agcaatggat
      241 ggacaaacaa accctgtgtt tgaatttgga aaaatgttta tgctttttgc tgtagtgtgg
      301 tacatgtttt taagggcacc aaatgacaat aatcaccgct tcatgataca cgatgaggtg
      361 acgagtaaag attatgttat ttctcaaatt cctataggca taggaaaaag ctttgcattg
      421 atgacgcaat ttgagaaggt tatcctagaa gctatggaaa aacatttcac aactccacaa
      481 tctacaaatt tttctaacgc aggtttaggt ttttcacttc aagtgatgag tactttgcca
      541 agtgtaaagc tttcggctat tgatgcaact ttgcaaaaaa atattgattt ttattttaga
      601 aactgcgttt cagtaggtat cttgcttaat caacaaggta gaaatctttt tcaaaa
//
LOCUS       DAQUWA010000195          653 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.195, whole genome shotgun sequence.
ACCESSION   DAQUWA010000195 DAQUWA010000000
VERSION     DAQUWA010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.195"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            10..>653
                     /locus_tag="R8X70_001987"
     CDS             10..>653
                     /locus_tag="R8X70_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HEF2929719.1"
                     /translation="MKRFYFLFFSTLFFAPSFLFGATNIANSNLIYTWGYGDVMNEIM
                     QAVKGITTETDYIVNAALAISLLLFSIKKAMDGQTNPVFEFGKMFMLFAVVWYMFLRA
                     PNDNNHRFMIHDEVTSKDYVISQIPIGIGKSFALMTQFEKVILEAMEKHFTTPQSTNF
                     SNAGLGFSLQVMSTLPNVKLSAIDATLQKNIDFYFRNCVSVGILLNQQGRNLFQ"
BASE COUNT          216 a           99 c          107 g          231 t
ORIGIN      
        1 aaacagtcca tgaaaagatt ttacttttta ttctttagca ctttgttttt tgcaccttca
       61 tttttatttg gtgctacaaa catagctaat agcaatttaa tttatacttg gggttatggc
      121 gatgtgatga atgaaatcat gcaagcggtt aaaggtataa ccactgaaac agattatatc
      181 gttaatgcag ccttagctat ttcattatta ctttttagta ttaaaaaagc aatggatgga
      241 caaacaaacc ctgtgtttga atttggaaaa atgtttatgc tttttgctgt agtgtggtac
      301 atgtttttaa gggcaccaaa tgacaataat caccgcttca tgattcacga tgaagtcact
      361 agcaaagatt atgttatttc tcaaattcct ataggcatag gaaaaagctt tgcattaatg
      421 acacaatttg agaaggttat cctagaagct atggaaaaac atttcacaac tccacaatct
      481 acaaattttt ctaatgcagg tttaggtttt tcacttcaag taatgagtac tttaccaaat
      541 gtaaagcttt cggctattga tgcaactttg caaaaaaata ttgattttta ttttagaaac
      601 tgcgtttcag taggtatctt gcttaatcaa caaggtagaa atctttttca aaa
//
LOCUS       DAQUWA010000196          618 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.196, whole genome shotgun sequence.
ACCESSION   DAQUWA010000196 DAQUWA010000000
VERSION     DAQUWA010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.196"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            107..>618
                     /locus_tag="R8X70_001988"
     CDS             107..>618
                     /locus_tag="R8X70_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002898008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEF2929720.1"
                     /translation="MKKLSVKGNKGRNKRSYVQIMDILLTQLEENLPSKVVASRYDIT
                     LQTVYKWKKIYAKHLENYKKLKEEAKIKNADKENKDLQEEKIHNAACGKRLKLLRTSL
                     NLSQDRIAEILGITVAIYMRMEKGYTVLNSYIITKLYKFLGINPVYLITGEGDSFLIK
                     DPDLFKKINT"
BASE COUNT          283 a           64 c           88 g          183 t
ORIGIN      
        1 tataatataa atatatacta ttttataaca gtatcaaatt atattctgcg aatagatttt
       61 agataaaatt aaaataatat tttaggcaca aggaaaaata aaaataatga aaaaattatc
      121 tgtaaaaggc aataaaggaa gaaacaaaag aagctatgtt caaataatgg atattttatt
      181 aacacaattg gaggaaaatt taccttctaa agtggtagct tcaagatatg atattacttt
      241 gcagactgtc tataaatgga aaaaaatata tgcaaagcat ttagaaaatt acaaaaaatt
      301 gaaagaagaa gctaaaatta aaaatgcaga taaagaaaac aaagatttac aagaagaaaa
      361 aattcataac gcagcttgtg gaaagagact aaaactttta agaacttccc ttaatttaag
      421 tcaagatcgt atagcagaaa tcttaggcat aacagtagct atttatatga gaatggaaaa
      481 agggtataca gtattaaaca gctacataat tacaaaactt tataagttct taggtattaa
      541 tcctgtttat ttaattacag gtgaaggaga ttcctttcta attaaagatc ctgacttatt
      601 taaaaaaatt aatacaga
//
LOCUS       DAQUWA010000197          607 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.197, whole genome shotgun sequence.
ACCESSION   DAQUWA010000197 DAQUWA010000000
VERSION     DAQUWA010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.197"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>607
                     /locus_tag="R8X70_001989"
     CDS             <1..>607
                     /locus_tag="R8X70_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HEF2929721.1"
                     /translation="SKYFNQEYIYYLDMEKIKTKNAFQTMEDLAFRFGFTPPCLKESE
                     NLFKIQEFRGYIRYLFPITLYANQKDLSNIFSIKSPNNNPNASIDTSTSIAIILDRPH
                     KNSQKINIINEILNNDLSNDMSVYIDKSDLEKLEKNTLFFKQIKNYLYEFLQAIHKTI
                     EHTEDSMMKEEDVLLYFSKNKTLALEFKEIFNKELNNVKQSH"
BASE COUNT          262 a           83 c           68 g          194 t
ORIGIN      
        1 atcaaaatat ttcaatcaag agtatatata ttatctagat atggaaaaaa ttaaaacaaa
       61 aaatgctttt caaacaatgg aagatttagc ttttagattt ggctttactc caccttgtct
      121 aaaagaaagt gaaaatttat ttaaaattca agaatttaga ggatatatac gctatctttt
      181 tcccattacc ttatatgcaa atcagaaaga tttaagcaac atcttttcca ttaagtctcc
      241 caacaataat ccaaatgcta gcattgatac ttctacaagc attgctatta ttttagatag
      301 acctcataaa aactcgcaaa aaatcaatat tataaatgag attttaaata acgatttatc
      361 aaacgatatg agcgtatata tagataaaag tgacttggaa aaactagaaa aaaatactct
      421 tttctttaaa caaattaaaa actatctcta tgaatttctg caagcaattc acaaaacaat
      481 cgaacataca gaagattcaa tgatgaaaga ggaagatgta ttattatatt ttagcaaaaa
      541 taaaactttg gcattagaat ttaaagaaat ttttaacaaa gaattaaata atgttaaaca
      601 atctcat
//
LOCUS       DAQUWA010000198          606 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.198, whole genome shotgun sequence.
ACCESSION   DAQUWA010000198 DAQUWA010000000
VERSION     DAQUWA010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.198"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(80..167)
                     /locus_tag="R8X70_001990"
     tRNA            complement(80..167)
                     /locus_tag="R8X70_001990"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(131..133),aa:Ser,seq:gga)
     gene            272..348
                     /locus_tag="R8X70_001991"
     tRNA            272..348
                     /locus_tag="R8X70_001991"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:306..308,aa:Met,seq:cat)
BASE COUNT          216 a           73 c           85 g          232 t
ORIGIN      
        1 aatattttac aaaaatatta ttaagtagta aagtaatttt taataaaaca ataatatttt
       61 aatgttaaaa agttaatagt ggcagacagg aagggattcg aaccctcgaa agcttgcact
      121 ttacacgcgt tccaggcgtg ctccttcaac cgctcggaca cctgtctaat taaaaattaa
      181 attatatcta aaaaagcttt aaataaaatt ttagtaaaaa agagtataat tacattttca
      241 ttttgtaaaa tgatctttaa agatttatta tgtcagggta gctcagctgg ttagagcgct
      301 ggtctcataa gccggaggtc gggagttcaa gtctccccct tgacaccatt tttaaaactt
      361 cttttaaaaa atcaccctta aattatttta attacaaatt ttatcttaat agttttaaat
      421 tataaatttg tttttatctt agaatttaag ttctatttta aatttttggc atttaaattt
      481 gtaccatctt ttatatggct tgaaataaaa tttgtttgaa gagatggttt tgagataagg
      541 tatattttat aaaagataga aatttgatta ttgtatttta aagattaatg tttaaaaatt
      601 tatctc
//
LOCUS       DAQUWA010000199          598 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.199, whole genome shotgun sequence.
ACCESSION   DAQUWA010000199 DAQUWA010000000
VERSION     DAQUWA010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.199"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(127..354)
                     /locus_tag="R8X70_001992"
     CDS             complement(127..354)
                     /locus_tag="R8X70_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WGR domain-containing protein"
                     /protein_id="HEF2929722.1"
                     /translation="MNNVLLHRITEKGNIRYYSIEIIATLFEEYMVERVYGNVRFKSC
                     TGRKNNVFSSFNEAQIFFERLKKQKMKKGYA"
     gene            complement(367..507)
                     /locus_tag="R8X70_001993"
     CDS             complement(367..507)
                     /locus_tag="R8X70_001993"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929723.1"
                     /translation="MIEMMIPTYKDEISNTNKENEKINQMIKLAIEKMFKNDFLNKIN
                     NF"
BASE COUNT          190 a           85 c           47 g          276 t
ORIGIN      
        1 aattattaat ttaatatata ttttgagtat gcggttttag cctattatta attgtttata
       61 tgataaaata gacttatatc aaaagcctat tttatcaatg ttttttcttg ttttttaagc
      121 aaaaacttac gcataccctt ttttcatttt ttgtttcttt aacctctcaa aaaaaatttg
      181 tgcctcatta aaacttgaaa atacattatt ttttcttcct gtgcaacttt taaaacgcac
      241 atttccgtaa actctctcaa ccatatattc ctcaaataga gtggcaataa tttctatgct
      301 ataatagcga atgtttcctt tctcagttat tctgtgcaac aaaacattat tcataaaaaa
      361 acctaattaa aaattattta ttttattcaa aaaatcattt ttaaacattt tttctatagc
      421 aagcttaatc atttgattaa ttttctcatt ttctttattt gtattagaaa tttcatcttt
      481 gtaagtagga atcatcattt ctatcatttt taatgttttt tcatcaaata atactctttt
      541 tggaattaat atttcatttt tttgaatatt ttcattattt attgtatttt tttccatt
//
LOCUS       DAQUWA010000200          588 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.200, whole genome shotgun sequence.
ACCESSION   DAQUWA010000200 DAQUWA010000000
VERSION     DAQUWA010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.200"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            80..313
                     /locus_tag="R8X70_001994"
     CDS             80..313
                     /locus_tag="R8X70_001994"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929724.1"
                     /translation="MHTITITSDNIDFIKSLECLSKNAGAIFKISKNDLEATLDNYED
                     NRTLDEVKKEAEETLLHYKQGKLSVTPLGSEWL"
     gene            314..>588
                     /locus_tag="R8X70_001995"
     CDS             314..>588
                     /locus_tag="R8X70_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEF2929725.1"
                     /translation="MKIVESDKFKKELNNILAFIAKDSVSAKNYFSKSLKDAILCIDN
                     MPYKFRKSTLFNDENIRDFIFKKYVIPYYIDSKNDKILLITIYKNNLV"
BASE COUNT          253 a           63 c           75 g          197 t
ORIGIN      
        1 attttacaat aaaaatactt gcaaaaattt attaaaatat ggtattatca tgttaataaa
       61 cttcaaaaaa ggaattataa tgcacactat aaccattaca agtgataata ttgatttcat
      121 aaaaagctta gaatgtttgt caaaaaatgc aggagctatt tttaaaattt ctaaaaatga
      181 tttagaagct actttggata attatgaaga taatcgaacc ttagatgaag taaaaaaaga
      241 agctgaagaa actttattac actataaaca aggaaaatta tcagtaactc cattaggtag
      301 cgaatggctg taaatgaaaa ttgtggaaag tgacaaattt aaaaaagagc ttaataatat
      361 tttagccttt attgctaaag atagtgtgag tgcaaaaaat tatttttcaa aatctttaaa
      421 agatgctatt ttatgtattg ataatatgcc ctataaattt cgaaaatcta ctctttttaa
      481 tgatgaaaac ataagagatt ttatctttaa gaaatatgtc attccatatt atatagattc
      541 aaaaaacgac aaaatacttt taattacgat ttataaaaac aaccttgt
//
LOCUS       DAQUWA010000201          569 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.201, whole genome shotgun sequence.
ACCESSION   DAQUWA010000201 DAQUWA010000000
VERSION     DAQUWA010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.201"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            81..275
                     /locus_tag="R8X70_001996"
     CDS             81..275
                     /locus_tag="R8X70_001996"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEF2929726.1"
                     /translation="MTLTINNADEKLLKAVQSIVSLSPKATLEIEQEIPSGETIEALN
                     NPVSCGVFENYEDFKKALQD"
     gene            276..551
                     /locus_tag="R8X70_001997"
     CDS             276..551
                     /locus_tag="R8X70_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002817426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
                     /protein_id="HEF2929727.1"
                     /translation="MRKINLLRSFKKDYEKVKKQSWDLNTIDDVIQCLMNLDVLPTRL
                     KDHALKGEFKDFRECHIFGDLVIIYKRDDKILSLYRIGRHQDLFKKY"
BASE COUNT          235 a           58 c           99 g          177 t
ORIGIN      
        1 aggcatttta tggcataaat acttgcaaaa attattaaaa aatggtataa ttatgttata
       61 taatttgaaa ggagttgctt atgacattaa ccataaataa tgcggatgaa aaattattaa
      121 aagctgtaca aagcatagta agtctttctc caaaagcaac acttgaaata gaacaagaaa
      181 ttccttcagg ggaaacaata gaagctttaa acaatcctgt aagttgtggg gtttttgaga
      241 attacgaaga ttttaaaaaa gcattgcaag actaaatgcg aaaaattaat cttttaagaa
      301 gttttaaaaa agactatgag aaagttaaaa agcagtcttg ggatttaaac acaattgatg
      361 atgttattca atgtttaatg aacttagatg ttttacctac aagactcaaa gatcacgctt
      421 taaaaggtga gtttaaagat tttagagaat gtcatatatt tggagatctg gttattatct
      481 ataaaagaga tgataaaatt ttaagtcttt atcgcatagg aaggcatcaa gacttattta
      541 aaaaatattg aaaggaataa agatggata
//
LOCUS       DAQUWA010000202          555 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.202, whole genome shotgun sequence.
ACCESSION   DAQUWA010000202 DAQUWA010000000
VERSION     DAQUWA010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.202"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..>555)
                     /locus_tag="R8X70_001998"
     CDS             complement(<1..>555)
                     /locus_tag="R8X70_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HEF2929728.1"
                     /translation="LFTNIGNGSQLTPLFENNNNIEKQSVVPCSDAGPQIVEMIKNDT
                     DEAMKIHAALLGMANDMANYEQKFLGAAQIYNEQAVSARSYLQQSMIMLASQDAIINT
                     AKSVGLNPASVAANTAYADQQFYASMQAQGHMAQTYLPLAKAYLTAIIIGLSWLVALL
                     SIVFGSYAHIKMFFTLCIWIVLWTP"
BASE COUNT          190 a          102 c           98 g          165 t
ORIGIN      
        1 aggagtccaa agcactatcc aaatacatag agtaaaaaac atcttaatat gtgcgtaaga
       61 gccaaataca atagaaagca aagcaacaag ccaagataaa cctataataa tagctgttaa
      121 ataagcttta gctaaaggca aataagtttg tgccatgtgt ccttgtgctt gcatacttgc
      181 ataaaattgc tgatccgcat aagcagtatt tgcagccaca gaagcaggat ttaatcctac
      241 tgatttagcg gtattaatga ttgcatcttg agaagcaagc attatcatgg attgttgcaa
      301 ataagatcta gcacttacag cttgttcatt atagatttgt gcagcgccta agaacttttg
      361 ctcataattt gccatatcat tcgccatacc aagcaaagca gcatgaatct tcatagcttc
      421 atctgtatcg tttttaatca tttcaacgat ttgaggacct gcatcagaac aaggcacaac
      481 actttgtttt tcaatattat tgttattttc aaacaaagga gtaagctgag agccattgcc
      541 tatgtttgtg aaaag
//
LOCUS       DAQUWA010000203          540 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.203, whole genome shotgun sequence.
ACCESSION   DAQUWA010000203 DAQUWA010000000
VERSION     DAQUWA010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.203"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..213)
                     /locus_tag="R8X70_001999"
     CDS             complement(<1..213)
                     /locus_tag="R8X70_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEF2929729.1"
                     /translation="MGFRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADD
                     ASGMAIADSLRSQANTLGQAISNGNDA"
     gene            complement(310..>540)
                     /locus_tag="R8X70_002000"
     CDS             complement(310..>540)
                     /locus_tag="R8X70_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929730.1"
                     /translation="YQNIENFNHSLDEDEFIQDEVLRGAFAYRGKLISDVLKLHIQDK
                     THFITAYIKAYDEWLLYFIEKLEQKYKSLSKV"
BASE COUNT          182 a           93 c           69 g          196 t
ORIGIN      
        1 agcatcgtta ccattagata tagcttgacc taaagtatta gcttgagatc ttaaactgtc
       61 tgctatcgcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctgcttaaa gaagcatcta aacttttact atttaaatca gcgtttgctt tagcatttaa
      181 agctgcaaca ttggtgttaa tacgaaatcc cattttaaat ccttttaaaa aatttcaagc
      241 tcatccatga acttgttaaa tgctatatcg tgcaatcaaa aaaatatttt atactttagt
      301 aataaaattt catacttttg acaaagactt gtatttttgt tctaactttt ctataaaata
      361 aagcaaccat tcatcataag ctttgatata ggctgtgata aaatgcgttt tatcttgtat
      421 atgaagtttt aatacatcag aaattaattt tccacgataa gcaaaagctc ctcttaaaac
      481 ttcatcctgt ataaactcat cttcatctaa agagtgatta aaattttcta tgttttgata
//
LOCUS       DAQUWA010000204          489 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.204, whole genome shotgun sequence.
ACCESSION   DAQUWA010000204 DAQUWA010000000
VERSION     DAQUWA010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 489)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.204"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>489
                     /locus_tag="R8X70_002001"
     CDS             <1..>489
                     /locus_tag="R8X70_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEF2929731.1"
                     /translation="TKQGLEQDAKAVKESVETVGVVESGNLTARITANPRNPQLIELK
                     NVLNRLLDVLQTKVGSDMNAIHKIFEEYKSLDFRNKLDNANGSVEVTTNALGDEIVKM
                     LKQSSDFANHLASESSKLQSAVQNLTSSSNSQAASLEETAAALEEITSSMQNVSVKTS
                     DV"
BASE COUNT          183 a           65 c           84 g          157 t
ORIGIN      
        1 tactaaacaa ggtttagaac aagatgctaa agcagtaaaa gaaagtgttg aaactgtagg
       61 agtagtagaa agtggtaatc ttactgcaag aattacagct aatcctagaa atccacaatt
      121 aatagaactt aaaaatgttc taaatagact tttagatgtt ttacaaacta aagtaggatc
      181 agatatgaat gctattcata agatctttga agaatataag tctttagact ttagaaataa
      241 acttgataat gctaatggta gtgttgaagt tactactaat gctttagggg atgaaattgt
      301 taagatgtta aaacaaagtt ctgactttgc taatcactta gctagtgaaa gttctaaact
      361 tcaaagtgca gttcaaaacc ttacttcatc ttctaattct caagcagctt ctttagaaga
      421 aactgcagct gctttagaag agattacttc ttctatgcaa aatgtttcag ttaaaactag
      481 tgatgttat
//
LOCUS       DAQUWA010000205          474 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.205, whole genome shotgun sequence.
ACCESSION   DAQUWA010000205 DAQUWA010000000
VERSION     DAQUWA010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.205"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
BASE COUNT          183 a           66 c           69 g          156 t
ORIGIN      
        1 taggtatttt atagcaaaaa aacttggctt ttttgatgaa atttgctata atatagcttg
       61 tatttaagca ctaataaggc taatcttccg attgtttaga aagggggtag ctatgattag
      121 agaaataatc gaatttacga ttctcttttt ggagacagta aataagataa tcgatttaat
      181 cgactatctt ttaaaataac tttcttacaa ctattttata agatccacgc ttagtcttag
      241 cttaatacaa acaaaaaagc ttttgaagct ttacaaaaat aaatgatcgg aagtgcgtgg
      301 cttctgattg tttaagtata gaagctatgc ttaaaagtaa tgcaaacaaa ttagcataaa
      361 aatacaattg atatttggcg actttttcca agtcaaataa aaaaaagaaa tccgtttcaa
      421 aacacagctc aataatccca gtcttaatac ttttaattaa acatacaaag acag
//
LOCUS       DAQUWA010000206          461 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.206, whole genome shotgun sequence.
ACCESSION   DAQUWA010000206 DAQUWA010000000
VERSION     DAQUWA010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.206"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            360..458
                     /locus_tag="R8X70_002002"
                     /pseudo
     CDS             360..458
                     /locus_tag="R8X70_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
BASE COUNT          169 a           60 c           67 g          165 t
ORIGIN      
        1 gcacttaatc acttatttag taagtcttgc gtttattgta agcggtttaa tagtttgttg
       61 tattttatac ttattcaaag ataaaataaa taaaataaca cctgagaata tagagaatat
      121 aaattcaaat attaaagatc ttgttagcaa gaacatgaaa aatgtttctt catttaatag
      181 tggatcatca gcaacagatt gttgttctat gattacagat tctagctata gatctctttc
      241 atgtaatata tttcatgata gagattaaaa caagtctagc ttttagctag actcgatttt
      301 acatatttct attttggtta ccaaaatcta tggctttgct aatgtcagct tttccataaa
      361 gcttagtaga ggcaatagat acaataagcg ataatagaag taaattctta gctgatcttg
      421 caaatagcgc tataaagtct tataaaataa gcacttaaaa a
//
LOCUS       DAQUWA010000207          380 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.209, whole genome shotgun sequence.
ACCESSION   DAQUWA010000207 DAQUWA010000000
VERSION     DAQUWA010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.209"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>380
                     /locus_tag="R8X70_002003"
     CDS             <1..>380
                     /locus_tag="R8X70_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="malonyl-[acyl-carrier protein]
                     O-methyltransferase BioC"
                     /protein_id="HEF2929732.1"
                     /translation="IFDMNTLATQNLSKQKFDLITSNASLQWLDLKQVLPTLANMLNK
                     KGILLLSTFGEMNLKEIKQSTSLGLKYFSTKELEQIFKPYFSDIKITEEIVNLEFQNA
                     LEVFRHLKLSGVNSLGFYRLNKQF"
BASE COUNT          146 a           55 c           55 g          124 t
ORIGIN      
        1 aaatttttga tatgaatacc ctagctacac agaatttaag caagcaaaaa tttgatctta
       61 tcacttctaa tgcaagtttg caatggcttg atttaaagca ggttttgccc acgctagcaa
      121 atatgctaaa taaaaaagga attttacttc tttctacttt tggagaaatg aatttaaaag
      181 agatcaaaca aagcacaagc ttgggtttaa aatattttag cacaaaagaa cttgaacaaa
      241 ttttcaaacc ctatttttcc gatattaaaa tcacagaaga aattgtaaat ttggaatttc
      301 aaaacgcttt agaagttttt agacatttaa aattaagcgg agtaaattct ttgggatttt
      361 atcgcttaaa caagcaattc
//
LOCUS       DAQUWA010000208          356 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.210, whole genome shotgun sequence.
ACCESSION   DAQUWA010000208 DAQUWA010000000
VERSION     DAQUWA010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.210"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
BASE COUNT          145 a           50 c           21 g          140 t
ORIGIN      
        1 tttttttgta aaaaattgtt ttttatctta tatataatta tattacatat tttttaaaat
       61 ttgtaataaa tatataatat aattgtataa aaagaaacat aaaataaaca taaaaaacaa
      121 cttaattata ctttttttga aataaatcac actttatttt caacttgact acaacttaac
      181 tacaatttga gtgcaacttg actacaactt gagggcaaaa aaacgctact tgataaactg
      241 cattttattt tcaacttaac tacaacttaa ctacaacata attacaactt gaattcaact
      301 ttattacaat tattttcaac ttaactacaa tttgagttca actttattac actttc
//
LOCUS       DAQUWA010000209          345 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.211, whole genome shotgun sequence.
ACCESSION   DAQUWA010000209 DAQUWA010000000
VERSION     DAQUWA010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.211"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..>345)
                     /locus_tag="R8X70_002004"
     rRNA            complement(<1..>345)
                     /locus_tag="R8X70_002004"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT           83 a          104 c           59 g           99 t
ORIGIN      
        1 catccgaaga cttcaaaaag cctttcagtt ctcggagtat tgttatacgg atttgcctgt
       61 ataacctcct acgaccttag actagcactt ccatccgcta gcccccttag ccctaagcgt
      121 ccttccatcg cacactaatg ttggtattgg aatattaacc aatttgccat cgtctacccc
      181 tttcggactc gacttaggac ccgactaacc ctacgatgac gagcatcgcg taggaaacct
      241 tgggtttacg gcgttaatga ttctcacatt aattatcgct actcatgcct gcatgctcac
      301 ttctattcgc tccagcactc cttaccggta taccttcgac gcaaa
//
LOCUS       DAQUWA010000210          335 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.212, whole genome shotgun sequence.
ACCESSION   DAQUWA010000210 DAQUWA010000000
VERSION     DAQUWA010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.212"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
BASE COUNT          129 a           56 c           23 g          127 t
ORIGIN      
        1 gagttaatta caaatcaact aaataaaata catatattac aagttgtttt caagcaatat
       61 gtaattttat ttcaatatgt gatacacatt aatacaactt tacttcaagt atagtttatg
      121 tttatgtaaa tttttatttc aacttaacta cacttttact acaacataac tacaacttga
      181 gtgcaaaaaa aacgctactt gataaactgc attttatttt caacttaact acaacttaac
      241 tacaacataa ttacaacttg aattcaactt tattacaatt attttcaact taactacaac
      301 ttgagttcaa cttgagttca actttattac acttc
//
LOCUS       DAQUWA010000211          334 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.213, whole genome shotgun sequence.
ACCESSION   DAQUWA010000211 DAQUWA010000000
VERSION     DAQUWA010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.213"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>334
                     /locus_tag="R8X70_002005"
     CDS             <1..>334
                     /locus_tag="R8X70_002005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="conjugal transfer protein TraG"
                     /protein_id="HEF2929733.1"
                     /translation="KDVNTNTNFALGSNGEITNMSIAGLDAKHAQSETQTRQDSLANS
                     IADTHKTGINQGITSNYLRNHGAGVEDTKAIEKAEAQALRETMSEVLGDKSSFSEADK
                     KALEGSIGA"
BASE COUNT          128 a           52 c           72 g           82 t
ORIGIN      
        1 ttaaagatgt gaatacaaat acaaattttg cattaggaag taatggtgaa attacaaata
       61 tgagcattgc gggacttgat gcaaaacatg cacaaagtga aacccaaact agacaagatt
      121 cgcttgctaa ttctattgcc gatactcata aaacaggcat taatcaaggt attacttcta
      181 actaccttag aaatcatggc gcaggagttg aagatactaa agcaattgag aaagcagaag
      241 cgcaagcttt aagagagact atgagcgaag tgttgggcga taaatctagc ttctctgaag
      301 cagataaaaa agctttagaa ggaagcattg gtgc
//
LOCUS       DAQUWA010000212          327 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.215, whole genome shotgun sequence.
ACCESSION   DAQUWA010000212 DAQUWA010000000
VERSION     DAQUWA010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.215"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
BASE COUNT          128 a           29 c           68 g          102 t
ORIGIN      
        1 tataaagggg gtgataaatg aggggataaa tgatgaaaat tattcaatga aatgtagcgg
       61 ataaagaagg ggaataaatg aggtgataaa gggcgagaag aagacttttc tatttaaggg
      121 ttaggttagg tacaaaaatg gcaatattat taacgaagtt aatgtatggt aggtacaaaa
      181 attttttggg tgtatttttt aaaaaaagac aaatcgcaat aagctatgtt ataaagtccc
      241 taaaaatagg cattctttgc tttaggttag gtacaaaaat gcccttactt aaacctagac
      301 tttttaatac ttaattaaaa ctatttt
//
LOCUS       DAQUWA010000213          304 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.217, whole genome shotgun sequence.
ACCESSION   DAQUWA010000213 DAQUWA010000000
VERSION     DAQUWA010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.217"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
BASE COUNT          124 a           31 c           35 g          114 t
ORIGIN      
        1 aaaatatatc tttttttaaa aaacactaat caagaagaat taaaagaaat attttcaaat
       61 tctattaatt cttctaatac aggtttaagt gattctaaaa ttgccaaaat tacaacaatt
      121 ccattgccaa cgctaaatac ttggaaaaag gataaatcaa cttatagaaa gaaaatctat
      181 gattttttga aaagttgcga tgaaagtaga ttaagaaata ttttcttatg aatttaaata
      241 tttaaaagct atttttagcc tcttgttaat tgtttgtatg ataaaattcg gttattttta
      301 tgta
//
LOCUS       DAQUWA010000214          262 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.220, whole genome shotgun sequence.
ACCESSION   DAQUWA010000214 DAQUWA010000000
VERSION     DAQUWA010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.220"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
BASE COUNT          110 a           17 c           66 g           69 t
ORIGIN      
        1 ataaaggggg tgataaatga ggggataaat gatgaaaatt attcaatgaa atgtagcgga
       61 taaagaaggg gaataaatga ggtgataaag ggcgagaaga aagcttttct atttaagggg
      121 gtgaaacggt ttaggttagg tataaaaatg gcaatattat taacgaagtt aatgagtgtt
      181 gggtacaaaa attttttagg tgcaatatta aaaaaaagac aaatcgcaat aagctatgct
      241 ataaagtcct taaaaatagg ta
//
LOCUS       DAQUWA010000215          251 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.221, whole genome shotgun sequence.
ACCESSION   DAQUWA010000215 DAQUWA010000000
VERSION     DAQUWA010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.221"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(<1..>251)
                     /locus_tag="R8X70_002006"
     CDS             complement(<1..>251)
                     /locus_tag="R8X70_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929734.1"
                     /translation="KVCKIVLFDCVAKDLEIQIAMIFDQQSILEHLSLYEILINASYY
                     LRFYEKQILFLNEMCLKTIGVAVRNANISCSLPLLTYGQ"
BASE COUNT          102 a           46 c           25 g           78 t
ORIGIN      
        1 ctgcccataa gtcaacaaag gcaaagaaca agaaatatta gcatttctta ctgctactcc
       61 tatggttttt aaacacattt catttaaaaa caaaatctgt ttttcataaa aacgaagata
      121 ataagaagca ttgatcaata tttcatacaa gcttagatgc tctaaaatac tttgctgatc
      181 aaaaatcata gcaatttgaa tttctaaatc ctttgcaaca cagtcaaata atacaatctt
      241 acaaactttc a
//
LOCUS       DAQUWA010000216          245 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.222, whole genome shotgun sequence.
ACCESSION   DAQUWA010000216 DAQUWA010000000
VERSION     DAQUWA010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.222"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            <1..>245
                     /locus_tag="R8X70_002007"
     CDS             <1..>245
                     /locus_tag="R8X70_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEF2929735.1"
                     /translation="LESIPFQRILSQRKNKFDNAIVVSAGPSLAKQLPLLKAYQDKAV
                     IFCADGALSMLEKEGIVPDYVTNLDFTDLAMKFFQNK"
BASE COUNT           87 a           34 c           42 g           82 t
ORIGIN      
        1 tgcttgaaag cattcctttt caaagaatct taagccaaag aaaaaacaaa tttgataatg
       61 ctatagtagt ttctgcagga ccaagtttag ctaaacaact tcctttactt aaagcttatc
      121 aagataaagc agtgatcttt tgtgctgatg gggctttaag tatgcttgaa aaagaaggta
      181 tagtgcctga ttatgttacg aatttagatt ttactgatct agcaatgaaa ttttttcaaa
      241 ataaa
//
LOCUS       DAQUWA010000217          245 bp    DNA     linear   BCT 02-NOV-2023
DEFINITION  TPA_asm: Campylobacter coli isolate 1909W71637
            SAMEA7632952-rid18206363.denovo.223, whole genome shotgun sequence.
ACCESSION   DAQUWA010000217 DAQUWA010000000
VERSION     DAQUWA010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA7632952
            Sequence Read Archive: ERR4879889
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001756972.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001756972.1
            Genome Coverage       :: 144x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/25/2023 01:36:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,962
            Genes (coding)                    :: 1,912
            CDSs (with protein)               :: 1,912
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 36 of 50
            Pseudo Genes (incomplete)         :: 15 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 7 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA7632952-rid18206363.denovo.223"
                     /isolate="1909W71637"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /country="Denmark"
                     /collection_date="2019"
     gene            complement(1..245)
                     /locus_tag="R8X70_002008"
                     /pseudo
     CDS             complement(1..245)
                     /locus_tag="R8X70_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790364.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT           75 a           37 c           29 g          104 t
ORIGIN      
        1 tttaattaaa tcaaaaattg taggctgcaa aaaaacatta aagcagcaag aataattaca
       61 tatgttttga cttctgtttt aaaactatct agcttgtttt caaccttatc gattttggct
      121 tcaaccttat cgattttagc attcaaaaga tctgtagttg ctaattttga aagctcttct
      181 ttaatttctc taagagcttc atcttttatc tcttgagaat ttatttgatt ttctttgtta
      241 aattc
//
